ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart19d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X84056.1|HVPAF93 H.vulgare paf93 gene 831 0.0
2gb|AF043093.1|AF043093 Hordeum vulgare dehydrin 8 (dhn8) gene, c... 482 e-133
3gb|U73211.1|TAU73211 Triticum aestivum cold acclimation protein ... 389 e-105
4gb|U73210.1|TAU73210 Triticum aestivum cold acclimation protein ... 371 1e-99
5gb|L29152.1|WHTWCOR Triticum aestivum cold acclimation protein (... 365 9e-98
6gb|L19419.1|LHPESI Lophopyrum elongatum ES135 mRNA sequence 357 2e-95
7gb|AF181458.1|AF181458 Hordeum vulgare dehydrin (Dhn8) mRNA, com... 345 8e-92
8emb|AJ890140.1| Triticum turgidum subsp. durum mRNA for dehydrin... 309 5e-81
9gb|AY574032.1| Triticum aestivum dehydrin-like gene, partial seq... 119 9e-24
10gb|AY587109.1| Oryza sativa (japonica cultivar-group) dehydratio... 98 3e-17
11gb|AY786415.1| Oryza sativa (japonica cultivar-group) SK3-type d... 98 3e-17
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
13dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
14dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
15dbj|AK070197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
16dbj|AB011367.1| Oryza sativa mRNA for LIP9, partial cds 98 3e-17
17gb|AY105067.1| Zea mays PCO081051 mRNA sequence 80 8e-12
18emb|AJ439990.1|OSA439990 Oryza sativa partial mRNA for putative ... 52 0.002
19emb|AL808127.4| Mouse DNA sequence from clone RP23-263L18 on chr... 48 0.027
20gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, com... 42 1.7
21emb|Z73906.1|CED2030 Caenorhabditis elegans Cosmid D2030, comple... 42 1.7
22emb|AL138725.19| Human DNA sequence from clone RP11-528A10 on ch... 42 1.7
23emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 i... 42 1.7
24gb|AF418126.1|AF418126 Desulfobacterium oleovorans DSM 6200 aden... 42 1.7
25gb|DQ015701.1| Ovis aries endothelial nitric oxide synthase mRNA... 42 1.7
26emb|BX322785.6| Zebrafish DNA sequence from clone DKEYP-78B1 in ... 42 1.7
27gb|AC147034.2| Mus musculus BAC clone RP23-189C2 from chromosome... 42 1.7
28gb|AC002482.1|AC002482 Human BAC clone CTA-208O3, complete sequence 42 1.7
29gb|M99057.1|BOVNIOXSY Bovine nitric oxide synthase mRNA, complet... 42 1.7
30gb|M89952.1|BOVECNOS Bos taurus endothelial nitric oxide synthas... 42 1.7
31gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, com... 40 6.6
32gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosom... 40 6.6
33ref|XM_760938.1| Theileria parva strain Muguga chromosome 1 hypo... 40 6.6
34gb|AC144479.1| Pan troglodytes BAC clone RP43-126P12 from 7, com... 40 6.6
35emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 i... 40 6.6
36emb|CR339044.19| Zebrafish DNA sequence from clone CH211-122G23 ... 40 6.6
37emb|BX927212.11| Zebrafish DNA sequence from clone CH211-262A5 i... 40 6.6
38gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome 40 6.6
39gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, com... 40 6.6
40dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.6
41gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.6
42dbj|AB167473.1| Chlamydomonas reinhardtii NSG5 mRNA for NSG5 pro... 40 6.6
43dbj|BS000095.1| Pan troglodytes chromosome 22 clone:RP43-177D07,... 40 6.6
44dbj|BS000094.1| Pan troglodytes chromosome 22 clone:PTB-240N13, ... 40 6.6
45gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, comple... 40 6.6
46dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.6
47dbj|AP000469.3| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 6.6 
>emb|X84056.1|HVPAF93 H.vulgare paf93 gene
          Length = 1154

 Score =  831 bits (419), Expect = 0.0
 Identities = 431/435 (99%)
 Strand = Plus / Minus

                                                                        
Query: 54   ggcggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacaaagtgccc 113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 ggcggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacaaagtgccc 1095

                                                                        
Query: 114  gtaataataagcaaataaacttaaacaacatccaggacctgactctggaccaaactgaag 173
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 gtaataataagcaaataaacttaaacaacatccaggacctgactctggaccaaactgaag 1035

                                                                        
Query: 174  cccgtatacccaaactgaacacaagcatccgtcacctaacgggcttcacagaccggacct 233
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1034 cccgtatacccaaactgaacacaagcatccgtcacctaacggacttcacagaccggacct 975

                                                                        
Query: 234  tcaaagacgatcaatccctccatcttgacacggacttaaacttaaagcaaacacgacaca 293
            |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 974  tcaaagacgatcaatccctccatcttgacacggacttagacgtaaagcaaacacgacaca 915

                                                                        
Query: 294  cgccaacaatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctct 353
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914  cgccaacaatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctct 855

                                                                        
Query: 354  gggcttgtgctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaacc 413
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854  gggcttgtgctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaacc 795

                                                                        
Query: 414  gggcagcttgtccatggtcttgcccagtaggcccttcttctccttcgcgtccgggctgct 473
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794  gggcagcttgtccatgatcttgcccagtaggcccttcttctccttcgcgtccgggctgct 735

                           
Query: 474  cacctcctcggcggc 488
            |||||||||||||||
Sbjct: 734  cacctcctcggcggc 720
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>gb|AF043093.1|AF043093 Hordeum vulgare dehydrin 8 (dhn8) gene, complete cds
          Length = 2254

 Score =  482 bits (243), Expect = e-133
 Identities = 246/247 (99%)
 Strand = Plus / Minus

                                                                        
Query: 242  gatcaatccctccatcttgacacggacttaaacttaaagcaaacacgacacacgccaaca 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 gatcaatccctccatcttgacacggacttaaacttaaagcaaacacgacacacgccaaca 2187

                                                                        
Query: 302  atttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttgt 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 atttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttgt 2127

                                                                        
Query: 362  gctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaaccgggcagct 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 gctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaaccgggcagct 2067

                                                                        
Query: 422  tgtccatggtcttgcccagtaggcccttcttctccttcgcgtccgggctgctcacctcct 481
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2066 tgtccatgatcttgcccagtaggcccttcttctccttcgcgtccgggctgctcacctcct 2007

                   
Query: 482  cggcggc 488
            |||||||
Sbjct: 2006 cggcggc 2000
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>gb|U73211.1|TAU73211 Triticum aestivum cold acclimation protein WCOR410c (Wcor410c) mRNA,
            complete cds
          Length = 1242

 Score =  389 bits (196), Expect = e-105
 Identities = 284/308 (92%), Gaps = 4/308 (1%)
 Strand = Plus / Minus

                                                                        
Query: 183  ccaaactgaa-cacaagcatccgtcacctaacgggcttcacagaccggaccttcaaagac 241
            |||||||||| ||||||||||||||||  |||||||||||| ||||| ||||||||||||
Sbjct: 1037 ccaaactgaaacacaagcatccgtcactgaacgggcttcacggaccgaaccttcaaagac 978

                                                                        
Query: 242  gatcaatccctcc-atcttgacacggacttaaacttaaagcaaacacgacacacgccaac 300
            |||||| |||||| | ||||||||  |||||| | |||||||||||| ||||||||||||
Sbjct: 977  gatcaacccctcccaccttgacaccaacttaa-cgtaaagcaaacacaacacacgccaac 919

                                                                        
Query: 301  aatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttg 360
            |||| ||| |||||||||| | |||||||||| ||||||||||||||||| |||||||||
Sbjct: 918  aattcaatcgaggtccggtcacgagtctcggg-cacggcggcgatcaagcgctgggcttg 860

                                                                        
Query: 361  tgctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaaccgggcagc 420
            |||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 859  tgctcgcctgcagcggcggcggccttgtcctcctcccctgtcttgtggtaaccaggcagc 800

                                                                        
Query: 421  ttgtccatggtcttgcccagtaggcccttcttctccttcgcgtccgggctgctcacctcc 480
            ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 799  ttgtccatgatcttgcccagtaggcccttcttctccttcgcgtcagggctgctcacctcc 740

                    
Query: 481  tcggcggc 488
            ||||||||
Sbjct: 739  tcggcggc 732



 Score =  123 bits (62), Expect = 6e-25
 Identities = 105/116 (90%), Gaps = 5/116 (4%)
 Strand = Plus / Minus

                                                                        
Query: 57   ggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacaaagtgcccgta 116
            |||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||   
Sbjct: 1138 ggaaatctttaatatcaaggcataatgcccagcaaataaccaatacac-aagcgccc--- 1083

                                                                    
Query: 117  ataataagcaaataaacttaaacaacatccaggacctgactctggaccaaactgaa 172
            |||||||| ||| |||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 1082 ataataagtaaacaaactt-aacaacatccaggacctgactctgaaccaaactgaa 1028
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>gb|U73210.1|TAU73210 Triticum aestivum cold acclimation protein WCOR410b (Wcor410b) mRNA,
            complete cds
          Length = 1181

 Score =  371 bits (187), Expect = 1e-99
 Identities = 273/299 (91%), Gaps = 2/299 (0%)
 Strand = Plus / Minus

                                                                        
Query: 191  aacacaagcatccgtcacctaacgggcttcacagaccggaccttcaaagacgatcaatcc 250
            |||| ||||| |||||||  |||||||||||| |||||||||||||||||||||||| ||
Sbjct: 1038 aacagaagcacccgtcactcaacgggcttcacggaccggaccttcaaagacgatcaaccc 979

                                                                        
Query: 251  ctcc-atcttgacacggacttaaacttaaagcaaacacgacacacgccaacaatttaatg 309
            |||| | ||||||||  ||||| || |||||||||||| |||||||||||||||| ||| 
Sbjct: 978  ctcccaccttgacaccaacttagacgtaaagcaaacacaacacacgccaacaattcaatc 919

                                                                        
Query: 310  gaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttgtgctcgcct 369
            |||||||||| | | |||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 918  gaggtccggtcacgggtctcggg-cacggcggcgatcaagcgctgggcttgtgctcgcct 860

                                                                        
Query: 370  gaaggggcggcggccttgtcctcctcccctgtcttgtggtaaccgggcagcttgtccatg 429
            | || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 859  gtagcggcggcggccttgtcctcctcccctgtcttgtggtaaccaggcagcttgtccatg 800

                                                                       
Query: 430  gtcttgcccagtaggcccttcttctccttcgcgtccgggctgctcacctcctcggcggc 488
             |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 799  atcttgcccagcaggcccttcttctccttcgcgtcagggctgctcacctcctcggcggc 741



 Score =  137 bits (69), Expect = 4e-29
 Identities = 78/81 (96%)
 Strand = Plus / Minus

                                                                        
Query: 26   tcttcacaaaatgcaacaatatatactgggcggaaatctttaatatcaaggcataatgcc 85
            ||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1169 tcttcacaacatgcagcaatatgtactgggcggaaatctttaatatcaaggcataatgcc 1110

                                 
Query: 86   cagcaataaaccaatacacaa 106
            |||||||||||||||||||||
Sbjct: 1109 cagcaataaaccaatacacaa 1089
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>gb|L29152.1|WHTWCOR Triticum aestivum cold acclimation protein (WCOR410) mRNA, complete
            cds
          Length = 1136

 Score =  365 bits (184), Expect = 9e-98
 Identities = 277/304 (91%), Gaps = 3/304 (0%)
 Strand = Plus / Minus

                                                                        
Query: 183  ccaaactgaa-cacaagcatccgtcacctaacgggcttcacagaccggaccttcaaagac 241
            |||||||||| || ||||| |||||||  |||||||||||| ||||||||||||||||||
Sbjct: 1038 ccaaactgaaacagaagcacccgtcactgaacgggcttcacggaccggaccttcaaagac 979

                                                                        
Query: 242  gatcaatccctcc-atcttgacacggacttaaacttaaagcaaacacgacacacgccaac 300
            |||||| |||||| | ||||||||  ||||| || |||||||||||| ||||||||||||
Sbjct: 978  gatcaacccctcccaccttgacaccaacttagacgtaaagcaaacacaacacacgccaac 919

                                                                        
Query: 301  aatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttg 360
            |||| ||| |||||||||| | | |||||||| ||||||||||||||||| |||||||||
Sbjct: 918  aattcaatcgaggtccggtcacgggtctcggg-cacggcggcgatcaagcgctgggcttg 860

                                                                        
Query: 361  tgctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaaccgggcagc 420
            |||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 859  tgctcgcctgtagcggcggcggccttgtcctcctcccctgtcttgtggtaaccaggcagc 800

                                                                        
Query: 421  ttgtccatggtcttgcccagtaggcccttcttctccttcgcgtccgggctgctcacctcc 480
            ||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 799  ttgtccatgatcttgcccagcaggcccttcttctccttcgcgtcagggctgctcacctcc 740

                
Query: 481  tcgg 484
            ||||
Sbjct: 739  tcgg 736



 Score =  121 bits (61), Expect = 2e-24
 Identities = 104/116 (89%), Gaps = 8/116 (6%)
 Strand = Plus / Minus

                                                                        
Query: 57   ggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacaaagtgcccgta 116
            |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||   
Sbjct: 1136 ggaaatctttaatatcaaggcataatgcccagcaataaaccaatacac-aagtgccc--- 1081

                                                                    
Query: 117  ataataagcaaataaacttaaacaacatccaggacctgactctggaccaaactgaa 172
               ||||| ||| ||||||  ||||||||||||||||||||||| |||||||||||
Sbjct: 1080 ---ataagtaaacaaactt-gacaacatccaggacctgactctgaaccaaactgaa 1029
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>gb|L19419.1|LHPESI Lophopyrum elongatum ES135 mRNA sequence
          Length = 1130

 Score =  357 bits (180), Expect = 2e-95
 Identities = 280/308 (90%), Gaps = 4/308 (1%)
 Strand = Plus / Minus

                                                                        
Query: 183  ccaaactgaa-cacaagcatccgtcacctaacgggcttcacagaccggaccttcaaagac 241
            |||||||||| ||||| ||||||||||  ||||||||||||||||||||||||||| |||
Sbjct: 1009 ccaaactgaaacacaaacatccgtcactgaacgggcttcacagaccggaccttcaa-gac 951

                                                                        
Query: 242  gatcaatccctcc-atcttgacacggacttaaacttaaagcaaacacgacacacgccaac 300
            |||||| |||||| | ||||||||  ||||| || |||||||||||| ||||||||||||
Sbjct: 950  gatcaacccctcccaccttgacaccaacttagacgtaaagcaaacacaacacacgccaac 891

                                                                        
Query: 301  aatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttg 360
            |||| ||| ||| |||||| | |||||||||| |||||||||||| |||| |||||||||
Sbjct: 890  aattcaatcgagctccggtcacgagtctcggg-cacggcggcgattaagcgctgggcttg 832

                                                                        
Query: 361  tgctcgcctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaaccgggcagc 420
            |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 831  tgctcgcctgcaggggcggcggccttgtcctcctcccctgtcttgtggtaaccaggcagc 772

                                                                        
Query: 421  ttgtccatggtcttgcccagtaggcccttcttctccttcgcgtccgggctgctcacctcc 480
            ||||||||| |||||||||| | ||||||||||||||||||||| ||||||||||| |||
Sbjct: 771  ttgtccatgatcttgcccagcaagcccttcttctccttcgcgtcagggctgctcacttcc 712

                    
Query: 481  tcggcggc 488
            ||||||||
Sbjct: 711  tcggcggc 704



 Score =  147 bits (74), Expect = 4e-32
 Identities = 114/125 (91%), Gaps = 8/125 (6%)
 Strand = Plus / Minus

                                                                        
Query: 48   atactgggcggaaatctttaatatcaaggcataatgcccagcaataaaccaatacacaaa 107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1116 atactgggcggaaatctttaatatcaaggcataatgcccagcaataaaccaatacac-aa 1058

                                                                        
Query: 108  gtgcccgtaataataagcaaataaacttaaacaacatccaggacctgactctggaccaaa 167
            ||||||      ||||| ||| |||||| |||||||||||||||||||||||| ||||||
Sbjct: 1057 gtgccc------ataagtaaacaaactt-aacaacatccaggacctgactctgaaccaaa 1005

                 
Query: 168  ctgaa 172
            |||||
Sbjct: 1004 ctgaa 1000
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>gb|AF181458.1|AF181458 Hordeum vulgare dehydrin (Dhn8) mRNA, complete cds
          Length = 808

 Score =  345 bits (174), Expect = 8e-92
 Identities = 180/182 (98%)
 Strand = Plus / Minus

                                                                       
Query: 307 atggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttgtgctcg 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 atggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttgtgctcg 749

                                                                       
Query: 367 cctgaaggggcggcggccttgtcctcctcccctgtcttgtggtaaccgggcagcttgtcc 426
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 748 cctgaaggggcggcggccttgtcctcctcctctgtcttgtggtaaccgggcagcttgtcc 689

                                                                       
Query: 427 atggtcttgcccagtaggcccttcttctccttcgcgtccgggctgctcacctcctcggcg 486
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 atgatcttgcccagtaggcccttcttctccttcgcgtccgggctgctcacctcctcggcg 629

             
Query: 487 gc 488
           ||
Sbjct: 628 gc 627
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>emb|AJ890140.1| Triticum turgidum subsp. durum mRNA for dehydrin (dhn11 gene)
          Length = 1127

 Score =  309 bits (156), Expect = 5e-81
 Identities = 275/308 (89%), Gaps = 5/308 (1%)
 Strand = Plus / Minus

                                                                        
Query: 183  ccaaactgaa-cacaagcatccgtcacctaacgggcttcacagaccggaccttcaaagac 241
            |||||||||| ||||||||||||||||  |||||||||||| ||||| ||||||||||||
Sbjct: 1035 ccaaactgaaacacaagcatccgtcactgaacgggcttcacggaccgaaccttcaaagac 976

                                                                        
Query: 242  gatcaatccctcc-atcttgacacggacttaaacttaaagcaaacacgacacacgccaac 300
            |||||| |||||| | ||||||||  |||||| | |||||||||||| ||||||||||||
Sbjct: 975  gatcaacccctcccaccttgacaccaacttaa-cgtaaagcaaacacaacacacgccaac 917

                                                                        
Query: 301  aatttaatggaggtccggtgatgagtctcggggcacggcggcgatcaagctctgggcttg 360
            |||| ||| | |||||||| | |||||||||| |||||||||| ||||||  |||| |||
Sbjct: 916  aattcaatcggggtccggtcacgagtctcggg-cacggcggcgttcaagcgttgggattg 858

                                                                        
Query: 361  tgctcgcc-tgaaggggcggcggccttgtcctcctcccctgtcttgtggtaaccgggcag 419
            |||||||| || || |||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 857  tgctcgccctgcagcggcggcggacttgtcctcctcccctgtcttgtggtaaccaggcag 798

                                                                        
Query: 420  cttgtccatggtcttgcccagtaggcccttcttctccttcgcgtccgggctgctcacctc 479
            |||||||||| |||||||||||||||||||||||||||||| ||| ||| || |||||||
Sbjct: 797  cttgtccatgatcttgcccagtaggcccttcttctccttcgggtcagggatggtcacctc 738

                    
Query: 480  ctcggcgg 487
            ||||||||
Sbjct: 737  ctcggcgg 730



 Score =  105 bits (53), Expect = 1e-19
 Identities = 96/107 (89%), Gaps = 5/107 (4%)
 Strand = Plus / Minus

                                                                        
Query: 66   taatatcaaggcataatgcccagcaataaaccaatacacaaagtgcccgtaataataagc 125
            ||||||||||||||||||||||||||  ||||||||||| ||| ||||   |||||||| 
Sbjct: 1127 taatatcaaggcataatgcccagcaaataaccaatacac-aagcgccc---ataataagt 1072

                                                           
Query: 126  aaataaacttaaacaacatccaggacctgactctggaccaaactgaa 172
            ||| |||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 1071 aaacaaactt-aacaacatccaggacctgactctgaaccaaactgaa 1026
to top
>gb|AY574032.1| Triticum aestivum dehydrin-like gene, partial sequence
          Length = 391

 Score =  119 bits (60), Expect = 9e-24
 Identities = 66/68 (97%)
 Strand = Plus / Minus

                                                                       
Query: 421 ttgtccatggtcttgcccagtaggcccttcttctccttcgcgtccgggctgctcacctcc 480
           ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 390 ttgtccatgatcttgcccagtaggcccttcttctccttcgcgtcagggctgctcacctcc 331

                   
Query: 481 tcggcggc 488
           ||||||||
Sbjct: 330 tcggcggc 323
to top
>gb|AY587109.1| Oryza sativa (japonica cultivar-group) dehydration-stress inducible
           protein 1 mRNA, complete cds
          Length = 1315

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                       
Query: 402 cttgtggtaaccgggcagcttgtccatggtcttgcccagtaggcccttcttctccttcgc 461
           |||||||||||||||||| || |||||| ||||||||||||  ||||||||||||||| |
Sbjct: 918 cttgtggtaaccgggcagtttctccatgatcttgcccagtatacccttcttctccttccc 859

                                
Query: 462 gtccgggctgctcacctcctc 482
            |||||||||||||| |||||
Sbjct: 858 atccgggctgctcacttcctc 838



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                        
Query: 38   gcaacaatatatactgggcggaaatctttaatatcaaggcataatgcccagcaataaacc 97
            |||||||||||| |||||| |||||| |||||| ||||||| ||||||||||   |||||
Sbjct: 1278 gcaacaatatattctgggcagaaatcattaataccaaggcagaatgcccagcccaaaacc 1219

                  
Query: 98   aataca 103
            ||||||
Sbjct: 1218 aataca 1213
to top
>gb|AY786415.1| Oryza sativa (japonica cultivar-group) SK3-type dehydrin 1 (Dhn1)
           mRNA, complete cds
          Length = 1117

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                       
Query: 402 cttgtggtaaccgggcagcttgtccatggtcttgcccagtaggcccttcttctccttcgc 461
           |||||||||||||||||| || |||||| ||||||||||||  ||||||||||||||| |
Sbjct: 908 cttgtggtaaccgggcagtttctccatgatcttgcccagtatacccttcttctccttccc 849

                                
Query: 462 gtccgggctgctcacctcctc 482
            |||||||||||||| |||||
Sbjct: 848 atccgggctgctcacttcctc 828
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                            
Query: 402      cttgtggtaaccgggcagcttgtccatggtcttgcccagtaggcccttcttctccttcgc 461
                |||||||||||||||||| || |||||| ||||||||||||  ||||||||||||||| |
Sbjct: 27184369 cttgtggtaaccgggcagtttctccatgatcttgcccagtatacccttcttctccttccc 27184428

                                     
Query: 462      gtccgggctgctcacctcctc 482
                 |||||||||||||| |||||
Sbjct: 27184429 atccgggctgctcacttcctc 27184449



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                            
Query: 38       gcaacaatatatactgggcggaaatctttaatatcaaggcataatgcccagcaataaacc 97
                |||||||||||| |||||| |||||| |||||| ||||||| ||||||||||   |||||
Sbjct: 27184009 gcaacaatatattctgggcagaaatcattaataccaaggcagaatgcccagcccaaaacc 27184068

                      
Query: 98       aataca 103
                ||||||
Sbjct: 27184069 aataca 27184074
to top
>dbj|AP004858.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1725_H08
          Length = 155431

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                         
Query: 402   cttgtggtaaccgggcagcttgtccatggtcttgcccagtaggcccttcttctccttcgc 461
             |||||||||||||||||| || |||||| ||||||||||||  ||||||||||||||| |
Sbjct: 80818 cttgtggtaaccgggcagtttctccatgatcttgcccagtatacccttcttctccttccc 80877

                                  
Query: 462   gtccgggctgctcacctcctc 482
              |||||||||||||| |||||
Sbjct: 80878 atccgggctgctcacttcctc 80898



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                         
Query: 38    gcaacaatatatactgggcggaaatctttaatatcaaggcataatgcccagcaataaacc 97
             |||||||||||| |||||| |||||| |||||| ||||||| ||||||||||   |||||
Sbjct: 80458 gcaacaatatattctgggcagaaatcattaataccaaggcagaatgcccagcccaaaacc 80517

                   
Query: 98    aataca 103
             ||||||
Sbjct: 80518 aataca 80523
to top
>dbj|AP005055.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0684A08
          Length = 137841

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Plus

                                                                         
Query: 402   cttgtggtaaccgggcagcttgtccatggtcttgcccagtaggcccttcttctccttcgc 461
             |||||||||||||||||| || |||||| ||||||||||||  ||||||||||||||| |
Sbjct: 35040 cttgtggtaaccgggcagtttctccatgatcttgcccagtatacccttcttctccttccc 35099

                                  
Query: 462   gtccgggctgctcacctcctc 482
              |||||||||||||| |||||
Sbjct: 35100 atccgggctgctcacttcctc 35120



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                         
Query: 38    gcaacaatatatactgggcggaaatctttaatatcaaggcataatgcccagcaataaacc 97
             |||||||||||| |||||| |||||| |||||| ||||||| ||||||||||   |||||
Sbjct: 34680 gcaacaatatattctgggcagaaatcattaataccaaggcagaatgcccagcccaaaacc 34739

                   
Query: 98    aataca 103
             ||||||
Sbjct: 34740 aataca 34745
to top
>dbj|AK070197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N13, full
           insert sequence
          Length = 1292

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                       
Query: 402 cttgtggtaaccgggcagcttgtccatggtcttgcccagtaggcccttcttctccttcgc 461
           |||||||||||||||||| || |||||| ||||||||||||  ||||||||||||||| |
Sbjct: 930 cttgtggtaaccgggcagtttctccatgatcttgcccagtatacccttcttctccttccc 871

                                
Query: 462 gtccgggctgctcacctcctc 482
            |||||||||||||| |||||
Sbjct: 870 atccgggctgctcacttcctc 850



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 58/66 (87%)
 Strand = Plus / Minus

                                                                        
Query: 38   gcaacaatatatactgggcggaaatctttaatatcaaggcataatgcccagcaataaacc 97
            |||||||||||| |||||| |||||| |||||| ||||||| ||||||||||   |||||
Sbjct: 1290 gcaacaatatattctgggcagaaatcattaataccaaggcagaatgcccagcccaaaacc 1231

                  
Query: 98   aataca 103
            ||||||
Sbjct: 1230 aataca 1225
to top
>dbj|AB011367.1| Oryza sativa mRNA for LIP9, partial cds
          Length = 680

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                       
Query: 402 cttgtggtaaccgggcagcttgtccatggtcttgcccagtaggcccttcttctccttcgc 461
           |||||||||||||||||| || |||||| ||||||||||||  ||||||||||||||| |
Sbjct: 351 cttgtggtaaccgggcagtttctccatgatcttgcccagtatacccttcttctccttccc 292

                                
Query: 462 gtccgggctgctcacctcctc 482
            |||||||||||||| |||||
Sbjct: 291 atccgggctgctcacttcctc 271
to top
>gb|AY105067.1| Zea mays PCO081051 mRNA sequence
          Length = 1398

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                       
Query: 401 tcttgtggtaaccgggcagcttgtccatggtcttgcccagtaggcccttcttctccttcg 460
           |||||||||| ||||| | |||||||||| |||||||||| | |||||||||||||||  
Sbjct: 928 tcttgtggtagccgggtatcttgtccatgatcttgcccagcaagcccttcttctccttgc 869

                           
Query: 461 cgtccgggctgctcac 476
           | ||||||||||||||
Sbjct: 868 catccgggctgctcac 853
to top
>emb|AJ439990.1|OSA439990 Oryza sativa partial mRNA for putative cold acclimation protein
           (cap-L gene)
          Length = 504

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 402 cttgtggtaaccgggcagcttgtccatggtcttgcccagta 442
           |||||||||||||||||| || | |||| ||||||||||||
Sbjct: 123 cttgtggtaaccgggcagtttctncatgatcttgcccagta 83
to top
>emb|AL808127.4| Mouse DNA sequence from clone RP23-263L18 on chromosome 2, complete
              sequence
          Length = 205838

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 152    ctgactctggaccaaactgaagcc 175
              ||||||||||||||||||||||||
Sbjct: 138293 ctgactctggaccaaactgaagcc 138316
to top
>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence
          Length = 156547

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 181    acccaaactgaacacaagcat 201
              |||||||||||||||||||||
Sbjct: 134241 acccaaactgaacacaagcat 134261
to top
>emb|Z73906.1|CED2030 Caenorhabditis elegans Cosmid D2030, complete sequence
          Length = 42665

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 24   tatcttcacaaaatgcaacaatata 48
            ||||||||||||||||| |||||||
Sbjct: 2779 tatcttcacaaaatgcaccaatata 2755
to top
>emb|AL138725.19| Human DNA sequence from clone RP11-528A10 on chromosome 6 Contains an
             IMPDH1 (IMP (inosine monophosphate) dehydrogenase 1)
             pseudogene, an RNA helicase pseudogene and part of a novel
             gene similar to KIAA0161, complete sequence
          Length = 165653

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 433   ttgcccagtaggcccttcttc 453
             |||||||||||||||||||||
Sbjct: 48697 ttgcccagtaggcccttcttc 48717
to top
>emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 in linkage group 24
              Contains part of a novel gene similar to human DECR2
              (peroxisomal 2,4-dienoyl CoA reductase 2),  a novel gene
              similar to human KIAA0665, a novel gene similar to human
              KIAA0683, a novel gene similar to human KIAA0590, part of a
              novel gene and three CpG islands, complete sequence
          Length = 161218

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 89     caataaaccaatacacaaagt 109
              |||||||||||||||||||||
Sbjct: 156591 caataaaccaatacacaaagt 156571
to top
>gb|AF418126.1|AF418126 Desulfobacterium oleovorans DSM 6200 adenosine-5'-phosphosulfate
           reductase alpha subunit (apsA) gene, partial cds
          Length = 912

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 420 cttgtccatggtcttgcccag 440
           |||||||||||||||||||||
Sbjct: 873 cttgtccatggtcttgcccag 853
to top
>gb|DQ015701.1| Ovis aries endothelial nitric oxide synthase mRNA, complete cds
          Length = 4097

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 374  gggcggcggccttgtcctcctcccc 398
            |||||||||||||| ||||||||||
Sbjct: 2195 gggcggcggccttggcctcctcccc 2171
to top
>emb|BX322785.6| Zebrafish DNA sequence from clone DKEYP-78B1 in linkage group 24,
             complete sequence
          Length = 176602

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    caataaaccaatacacaaagt 109
             |||||||||||||||||||||
Sbjct: 34762 caataaaccaatacacaaagt 34782
to top
>gb|AC147034.2| Mus musculus BAC clone RP23-189C2 from chromosome 7, complete sequence
          Length = 213581

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 77    cataatgcccagcaataaacc 97
             |||||||||||||||||||||
Sbjct: 49844 cataatgcccagcaataaacc 49824
to top
>gb|AC002482.1|AC002482 Human BAC clone CTA-208O3, complete sequence
          Length = 107815

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 14    atactgtatatatcttcacaa 34
             |||||||||||||||||||||
Sbjct: 55557 atactgtatatatcttcacaa 55577
to top
>gb|M99057.1|BOVNIOXSY Bovine nitric oxide synthase mRNA, complete cds
          Length = 4096

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 374  gggcggcggccttgtcctcctcccc 398
            |||||||||||||| ||||||||||
Sbjct: 2196 gggcggcggccttggcctcctcccc 2172
to top
>gb|M89952.1|BOVECNOS Bos taurus endothelial nitric oxide synthase mRNA, complete cds
          Length = 3738

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 374  gggcggcggccttgtcctcctcccc 398
            |||||||||||||| ||||||||||
Sbjct: 2186 gggcggcggccttggcctcctcccc 2162
to top
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence
          Length = 574126

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 377   cggcggccttgtcctcctcc 396
             ||||||||||||||||||||
Sbjct: 72754 cggcggccttgtcctcctcc 72735
to top
>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete sequence
          Length = 221754

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    aataagcaaataaacttaaa 138
              ||||||||||||||||||||
Sbjct: 153660 aataagcaaataaacttaaa 153679
to top
>ref|XM_760938.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0511) partial mRNA
          Length = 5448

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  aaataaacttaaacaacatc 145
            ||||||||||||||||||||
Sbjct: 4865 aaataaacttaaacaacatc 4884
to top
>gb|AC144479.1| Pan troglodytes BAC clone RP43-126P12 from 7, complete sequence
          Length = 211515

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 114    gtaataataagcaaataaacttaaacaa 141
              |||||||||||||||| || ||||||||
Sbjct: 140814 gtaataataagcaaattaaattaaacaa 140841
to top
>emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 in linkage group 1,
            complete sequence
          Length = 153891

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 12   acatactgtatatatcttca 31
            ||||||||||||||||||||
Sbjct: 5843 acatactgtatatatcttca 5824
to top
>emb|CR339044.19| Zebrafish DNA sequence from clone CH211-122G23 in linkage group 5,
             complete sequence
          Length = 177385

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   taataataagcaaataaacttaaa 138
             |||||||||| |||||||||||||
Sbjct: 63646 taataataagtaaataaacttaaa 63623
to top
>emb|BX927212.11| Zebrafish DNA sequence from clone CH211-262A5 in linkage group 5,
             complete sequence
          Length = 157791

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 115   taataataagcaaataaacttaaa 138
             |||||||||| |||||||||||||
Sbjct: 81135 taataataagtaaataaacttaaa 81112
to top
>gb|CP000077.1| Sulfolobus acidocaldarius DSM 639, complete genome
          Length = 2225959

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 21      atatatcttcacaaaatgcaacaa 44
               ||||||||||||||||| ||||||
Sbjct: 1527853 atatatcttcacaaaattcaacaa 1527876
to top
>gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, complete sequence
          Length = 181022

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    atactgtatatatcttcaca 33
             ||||||||||||||||||||
Sbjct: 87284 atactgtatatatcttcaca 87265
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 468     gctgctcacctcctcggcgg 487
               ||||||||||||||||||||
Sbjct: 7122494 gctgctcacctcctcggcgg 7122475
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 447     cttcttctccttcgcgtccgggct 470
               |||||||||||||||| |||||||
Sbjct: 4529751 cttcttctccttcgcggccgggct 4529728
to top
>dbj|AB167473.1| Chlamydomonas reinhardtii NSG5 mRNA for NSG5 protein, complete cds
          Length = 3594

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 417 cagcttgtccatggtcttgc 436
           ||||||||||||||||||||
Sbjct: 549 cagcttgtccatggtcttgc 530
to top
>dbj|BS000095.1| Pan troglodytes chromosome 22 clone:RP43-177D07, map 22, complete
            sequences
          Length = 181678

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 146  caggacctgactctggaccaaactgaag 173
            |||||| ||||||||||||| |||||||
Sbjct: 3276 caggacttgactctggaccagactgaag 3249
to top
>dbj|BS000094.1| Pan troglodytes chromosome 22 clone:PTB-240N13, map 22, complete
              sequences
          Length = 155513

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 146    caggacctgactctggaccaaactgaag 173
              |||||| ||||||||||||| |||||||
Sbjct: 131204 caggacttgactctggaccagactgaag 131177
to top
>gb|AC140483.3| Mus musculus BAC clone RP24-145A22 from 1, complete sequence
          Length = 176649

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aataagcaaataaacttaaa 138
              ||||||||||||||||||||
Sbjct: 121495 aataagcaaataaacttaaa 121476
to top
>dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, section 34/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 146   caggacctgactctggaccaaactgaag 173
             |||||| ||||||||||||| |||||||
Sbjct: 80688 caggacttgactctggaccagactgaag 80661
to top
>dbj|AP000469.3| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-132H24, complete
              sequence
          Length = 136804

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 146    caggacctgactctggaccaaactgaag 173
              |||||| ||||||||||||| |||||||
Sbjct: 102805 caggacttgactctggaccagactgaag 102778


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,410,962
Number of Sequences: 3902068
Number of extensions: 4410962
Number of successful extensions: 94599
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94332
Number of HSP's gapped (non-prelim): 253
length of query: 488
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 466
effective length of database: 17,147,199,772
effective search space: 7990595093752
effective search space used: 7990595093752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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