Clone Name | rbart19c10 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009041.1| Triticum aestivum clone wdk5c.pk006.c9:fis, full insert mRNA sequence Length = 1355 Score = 416 bits (210), Expect = e-113 Identities = 261/278 (93%) Strand = Plus / Minus Query: 226 cttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacctct 285 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 689 cttgatgttaggattttgctctttgaggtattttccagatccagtaatggtaccacctgt 630 Query: 286 cccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggtcc 345 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 629 cccgatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggccc 570 Query: 346 ggttgtctcatagtgaatctttgggttagcagcattctcgaattgctgaaggatgtatga 405 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 569 agttgtctcatagtgaatctttgggttggcagcattctcgaactgctgaaggatgtatga 510 Query: 406 attgggtgtctttattgccagctcttcggacttttggacaactcctttcattcccaaaag 465 || ||||||||| |||||||||||| | |||||||||| |||||||||||||||| || Sbjct: 509 gttaggtgtctttgctgccagctcttccgccttttggacagctcctttcattcccaagag 450 Query: 466 tgggtctgtgaggatcagctcagcaccaaaagccttca 503 |||||| ||||||| ||||||||||||||||||||||| Sbjct: 449 tgggtcggtgaggaccagctcagcaccaaaagccttca 412
>dbj|D13153.1|WHTCYS1 Triticum aestivum mRNA for O-acetylserine (thiol) lyase Length = 1371 Score = 400 bits (202), Expect = e-108 Identities = 259/278 (93%) Strand = Plus / Minus Query: 226 cttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacctct 285 |||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||| | Sbjct: 686 cttgatgttaggattttgctcttggaggtattttccagttccagtaatggtaccacctgt 627 Query: 286 cccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggtcc 345 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 626 cccgatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggccc 567 Query: 346 ggttgtctcatagtgaatctttgggttagcagcattctcgaattgctgaaggatgtatga 405 ||||||||||| |||||||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 566 agttgtctcataatgaatctttgggttggcagcattctcaaactgctgaaggatgtatga 507 Query: 406 attgggtgtctttattgccagctcttcggacttttggacaactcctttcattcccaaaag 465 |||||||||||| |||||||||||| | |||||||||| |||||||||||||||| || Sbjct: 506 gttgggtgtctttgctgccagctcttctgccttttggacagctcctttcattcccaagag 447 Query: 466 tgggtctgtgaggatcagctcagcaccaaaagccttca 503 |||||| ||||||||||||||||||||||||||||||| Sbjct: 446 tgggtcggtgaggatcagctcagcaccaaaagccttca 409
>emb|AJ622893.1| Triticum durum partial mRNA for DRP6 protein (drg6 gene) Length = 466 Score = 276 bits (139), Expect = 7e-71 Identities = 184/199 (92%) Strand = Plus / Plus Query: 305 ccatcgatctttcctcctgtgcctttccagatttcaggtccggttgtctcatagtgaatc 364 |||||||||||||| ||||||||||||||||||||||| || ||||||||||| |||||| Sbjct: 1 ccatcgatctttccacctgtgcctttccagatttcaggcccagttgtctcataatgaatc 60 Query: 365 tttgggttagcagcattctcgaattgctgaaggatgtatgaattgggtgtctttattgcc 424 |||||||| ||||||||||| || ||||||||||||||||| |||||||||||| |||| Sbjct: 61 tttgggttggcagcattctcaaactgctgaaggatgtatgagttgggtgtctttgctgcc 120 Query: 425 agctcttcggacttttggacaactcctttcattcccaaaagtgggtctgtgaggatcagc 484 |||||||| | |||||||||| |||||||||||||||| |||||||| |||||||||||| Sbjct: 121 agctcttctgccttttggacagctcctttcattcccaagagtgggtcggtgaggatcagc 180 Query: 485 tcagcaccaaaagccttca 503 ||||||||||||||||||| Sbjct: 181 tcagcaccaaaagccttca 199
>dbj|AK099598.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045K17, full insert sequence Length = 1281 Score = 202 bits (102), Expect = 8e-49 Identities = 234/278 (84%) Strand = Plus / Minus Query: 226 cttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacctct 285 |||||||| ||||||||||||| |||||||| ||||| ||||||||| || |||||| | Sbjct: 682 cttgatatcaggattttgctctctgaggtatcgtccagctccagtaatagtgccacctgt 623 Query: 286 cccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggtcc 345 |||||| |||||||| | ||||| | || |||||||| |||||||||||||||||||| Sbjct: 622 cccaataccagaaactaaaccatcaactttacctcctgttcctttccagatttcaggtcc 563 Query: 346 ggttgtctcatagtgaatctttgggttagcagcattctcgaattgctgaaggatgtatga 405 || ||||| || || |||||||||||||||| ||||||||||| || ||||| |||| Sbjct: 562 agtggtctcgtaatggatctttgggttagcagggttctcgaattgttggaggataaatga 503 Query: 406 attgggtgtctttattgccagctcttcggacttttggacaactcctttcattcccaaaag 465 ||| |||||| |||||| ||||| | |||||||||| |||||||||||||||| || Sbjct: 502 gttgtttgtcttcgctgccagttcttctgccttttggacagctcctttcattcccaagag 443 Query: 466 tgggtctgtgaggatcagctcagcaccaaaagccttca 503 |||||| || || |||| ||||||||||||||||||| Sbjct: 442 tgggtcagtaagtatcaattcagcaccaaaagccttca 405
>dbj|AK061993.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-C03, full insert sequence Length = 1280 Score = 202 bits (102), Expect = 8e-49 Identities = 234/278 (84%) Strand = Plus / Minus Query: 226 cttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacctct 285 |||||||| ||||||||||||| |||||||| ||||| ||||||||| || |||||| | Sbjct: 681 cttgatatcaggattttgctctctgaggtatcgtccagctccagtaatagtgccacctgt 622 Query: 286 cccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggtcc 345 |||||| |||||||| | ||||| | || |||||||| |||||||||||||||||||| Sbjct: 621 cccaataccagaaactaaaccatcaactttacctcctgttcctttccagatttcaggtcc 562 Query: 346 ggttgtctcatagtgaatctttgggttagcagcattctcgaattgctgaaggatgtatga 405 || ||||| || || |||||||||||||||| ||||||||||| || ||||| |||| Sbjct: 561 agtggtctcgtaatggatctttgggttagcagggttctcgaattgttggaggataaatga 502 Query: 406 attgggtgtctttattgccagctcttcggacttttggacaactcctttcattcccaaaag 465 ||| |||||| |||||| ||||| | |||||||||| |||||||||||||||| || Sbjct: 501 gttgtttgtcttcgctgccagttcttctgccttttggacagctcctttcattcccaagag 442 Query: 466 tgggtctgtgaggatcagctcagcaccaaaagccttca 503 |||||| || || |||| ||||||||||||||||||| Sbjct: 441 tgggtcagtaagtatcaattcagcaccaaaagccttca 404
>gb|AF073695.1|AF073695 Oryza sativa cysteine synthase (rcs1) mRNA, complete cds Length = 1290 Score = 202 bits (102), Expect = 8e-49 Identities = 234/278 (84%) Strand = Plus / Minus Query: 226 cttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacctct 285 |||||||| ||||||||||||| |||||||| ||||| ||||||||| || |||||| | Sbjct: 676 cttgatatcaggattttgctctctgaggtatcgtccagttccagtaatagtgccacctgt 617 Query: 286 cccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggtcc 345 |||||| |||||||| | ||||| | || |||||||| |||||||||||||||||||| Sbjct: 616 cccaataccagaaactaaaccatcaactttacctcctgttcctttccagatttcaggtcc 557 Query: 346 ggttgtctcatagtgaatctttgggttagcagcattctcgaattgctgaaggatgtatga 405 || ||||| || || |||||||||||||||| ||||||||||| || ||||| |||| Sbjct: 556 agtggtctcgtaatggatctttgggttagcagggttctcgaattgttggaggataaatga 497 Query: 406 attgggtgtctttattgccagctcttcggacttttggacaactcctttcattcccaaaag 465 ||| |||||| |||||| ||||| | |||||||||| |||||||||||||||| || Sbjct: 496 gttgtttgtcttcgctgccagttcttctgccttttggacagctcctttcattcccaagag 437 Query: 466 tgggtctgtgaggatcagctcagcaccaaaagccttca 503 |||||| || || |||| ||||||||||||||||||| Sbjct: 436 tgggtcagtaagtatcaattcagcaccaaaagccttca 399
>gb|BT016496.1| Zea mays clone Contig329 mRNA sequence Length = 1500 Score = 170 bits (86), Expect = 3e-39 Identities = 230/278 (82%) Strand = Plus / Minus Query: 226 cttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacctct 285 ||||| |||||||||||||||| |||||||| |||| || || |||||||| ||| | Sbjct: 829 cttgacattaggattttgctctctgaggtatcgcccagtaccggtgatggtacctcctgt 770 Query: 286 cccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggtcc 345 ||| || ||||| ||||||||||| || |||||| |||| |||||||||||||||| || Sbjct: 769 cccgataccagatacaaggccatcaatttttcctgctgtagctttccagatttcaggccc 710 Query: 346 ggttgtctcatagtgaatctttgggttagcagcattctcgaattgctgaaggatgtatga 405 || |||||||||||||||||||||||||| | ||| || ||||| ||||||||||| || Sbjct: 709 agtagtctcatagtgaatctttgggttagctggattttcaaattgttgaaggatgtaaga 650 Query: 406 attgggtgtctttattgccagctcttcggacttttggacaactcctttcattcccaaaag 465 |||||||||||| | | |||||| | || | |||| ||||||||||||||| || Sbjct: 649 gttgggtgtctttgcttgtatctcttccgctttcttgacagctcctttcattcccaggag 590 Query: 466 tgggtctgtgaggatcagctcagcaccaaaagccttca 503 |||||| || |||| || ||||||||||||||||||| Sbjct: 589 tgggtcagtaaggacaagttcagcaccaaaagccttca 552
>emb|X85803.1|ZMCSOATL Z.mays mRNA for cysteine synthase Length = 1319 Score = 170 bits (86), Expect = 3e-39 Identities = 230/278 (82%) Strand = Plus / Minus Query: 226 cttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacctct 285 ||||| |||||||||||||||| |||||||| |||| || || |||||||| ||| | Sbjct: 684 cttgacattaggattttgctctctgaggtatcgcccagtaccggtgatggtacctcctgt 625 Query: 286 cccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggtcc 345 ||| || ||||| ||||||||||| || |||||| |||| |||||||||||||||| || Sbjct: 624 cccgataccagatacaaggccatcaatttttcctgctgtagctttccagatttcaggccc 565 Query: 346 ggttgtctcatagtgaatctttgggttagcagcattctcgaattgctgaaggatgtatga 405 || |||||||||||||||||||||||||| | ||| || ||||| ||||| ||||| || Sbjct: 564 agtagtctcatagtgaatctttgggttagctggattttcaaattgttgaagaatgtacga 505 Query: 406 attgggtgtctttattgccagctcttcggacttttggacaactcctttcattcccaaaag 465 |||||||||||| | | |||||| | || | |||| |||||||||||||||| || Sbjct: 504 gttgggtgtctttgcttgtatctcttccgctttcttgacagctcctttcattcccaagag 445 Query: 466 tgggtctgtgaggatcagctcagcaccaaaagccttca 503 |||||| || |||| || ||||||||||||||||||| Sbjct: 444 tgggtcagtaaggacaagttcagcaccaaaagccttca 407
>gb|AY103651.1| Zea mays PCO145346 mRNA sequence Length = 1483 Score = 170 bits (86), Expect = 3e-39 Identities = 230/278 (82%) Strand = Plus / Minus Query: 226 cttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacctct 285 ||||| |||||||||||||||| |||||||| |||| || || |||||||| ||| | Sbjct: 832 cttgacattaggattttgctctctgaggtatcgcccagtaccggtgatggtacctcctgt 773 Query: 286 cccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggtcc 345 ||| || ||||| ||||||||||| || |||||| |||| |||||||||||||||| || Sbjct: 772 cccgataccagatacaaggccatcaatttttcctgctgtagctttccagatttcaggccc 713 Query: 346 ggttgtctcatagtgaatctttgggttagcagcattctcgaattgctgaaggatgtatga 405 || |||||||||||||||||||||||||| | ||| || ||||| ||||| ||||| || Sbjct: 712 agtagtctcatagtgaatctttgggttagctggattttcaaattgttgaagaatgtacga 653 Query: 406 attgggtgtctttattgccagctcttcggacttttggacaactcctttcattcccaaaag 465 |||||||||||| | | |||||| | || | |||| |||||||||||||||| || Sbjct: 652 gttgggtgtctttgcttgtatctcttccgctttcttgacagctcctttcattcccaagag 593 Query: 466 tgggtctgtgaggatcagctcagcaccaaaagccttca 503 |||||| || |||| || ||||||||||||||||||| Sbjct: 592 tgggtcagtaaggacaagttcagcaccaaaagccttca 555
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 109 bits (55), Expect = 9e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 224 accttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacct 283 |||||||||| ||||||||||||| |||||||| ||||| ||||||||| || |||||| Sbjct: 26733985 accttgatatcaggattttgctctctgaggtatcgtccagctccagtaatagtgccacct 26734044 Query: 284 ctcccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggt 343 ||||||| |||||||| | ||||| | || |||||||| |||||||||||||||||| Sbjct: 26734045 gtcccaataccagaaactaaaccatcaactttacctcctgttcctttccagatttcaggt 26734104 Query: 344 ccggttgtctc 354 || || ||||| Sbjct: 26734105 ccagtggtctc 26734115 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 364 ctttgggttagcagcattctcgaattgctgaaggatgtatgaattgggtgtctttattgc 423 |||||||||||||| ||||||||||| || ||||| |||| ||| |||||| ||| Sbjct: 26734203 ctttgggttagcagggttctcgaattgttggaggataaatgagttgtttgtcttcgctgc 26734262 Query: 424 cagctcttcggacttttggacaactcctttcattcccaaaagtgggtctgtgaggatcag 483 ||| ||||| | |||||||||| |||||||||||||||| |||||||| || || |||| Sbjct: 26734263 cagttcttctgccttttggacagctcctttcattcccaagagtgggtcagtaagtatcaa 26734322 Query: 484 ctcagcaccaaaagccttca 503 ||||||||||||||||||| Sbjct: 26734323 ttcagcaccaaaagccttca 26734342
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 109 bits (55), Expect = 9e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 224 accttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacct 283 |||||||||| ||||||||||||| |||||||| ||||| ||||||||| || |||||| Sbjct: 26662155 accttgatatcaggattttgctctctgaggtatcgtccagctccagtaatagtgccacct 26662214 Query: 284 ctcccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggt 343 ||||||| |||||||| | ||||| | || |||||||| |||||||||||||||||| Sbjct: 26662215 gtcccaataccagaaactaaaccatcaactttacctcctgttcctttccagatttcaggt 26662274 Query: 344 ccggttgtctc 354 || || ||||| Sbjct: 26662275 ccagtggtctc 26662285 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%) Strand = Plus / Plus Query: 364 ctttgggttagcagcattctcgaattgctgaaggatgtatgaattgggtgtctttattgc 423 |||||||||||||| ||||||||||| || ||||| |||| ||| |||||| ||| Sbjct: 26662373 ctttgggttagcagggttctcgaattgttggaggataaatgagttgtttgtcttcgctgc 26662432 Query: 424 cagctcttcggacttttggacaactcctttcattcccaaaagtgggtctgtgaggatcag 483 ||| ||||| | |||||||||| |||||||||||||||| |||||||| || || |||| Sbjct: 26662433 cagttcttctgccttttggacagctcctttcattcccaagagtgggtcagtaagtatcaa 26662492 Query: 484 ctcagcaccaaaagccttca 503 ||||||||||||||||||| Sbjct: 26662493 ttcagcaccaaaagccttca 26662512
>emb|AL731889.5|CNS08C8T Oryza sativa chromosome 12, . BAC OJ1122_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 83015 Score = 109 bits (55), Expect = 9e-21 Identities = 112/131 (85%) Strand = Plus / Minus Query: 224 accttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacct 283 |||||||||| ||||||||||||| |||||||| ||||| ||||||||| || |||||| Sbjct: 37139 accttgatatcaggattttgctctctgaggtatcgtccagctccagtaatagtgccacct 37080 Query: 284 ctcccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggt 343 ||||||| |||||||| | ||||| | || |||||||| |||||||||||||||||| Sbjct: 37079 gtcccaataccagaaactaaaccatcaactttacctcctgttcctttccagatttcaggt 37020 Query: 344 ccggttgtctc 354 || || ||||| Sbjct: 37019 ccagtggtctc 37009 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 364 ctttgggttagcagcattctcgaattgctgaaggatgtatgaattgggtgtctttattgc 423 |||||||||||||| ||||||||||| || ||||| |||| ||| |||||| ||| Sbjct: 36921 ctttgggttagcagggttctcgaattgttggaggataaatgagttgtttgtcttcgctgc 36862 Query: 424 cagctcttcggacttttggacaactcctttcattcccaaaagtgggtctgtgaggatcag 483 ||| ||||| | |||||||||| |||||||||||||||| |||||||| || || |||| Sbjct: 36861 cagttcttctgccttttggacagctcctttcattcccaagagtgggtcagtaagtatcaa 36802 Query: 484 ctcagcaccaaaagccttca 503 ||||||||||||||||||| Sbjct: 36801 ttcagcaccaaaagccttca 36782
>emb|BX000561.2|CNS08CE7 Oryza sativa chromosome 12, . BAC OJ1014_F06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104849 Score = 109 bits (55), Expect = 9e-21 Identities = 112/131 (85%) Strand = Plus / Minus Query: 224 accttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacct 283 |||||||||| ||||||||||||| |||||||| ||||| ||||||||| || |||||| Sbjct: 64993 accttgatatcaggattttgctctctgaggtatcgtccagctccagtaatagtgccacct 64934 Query: 284 ctcccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggt 343 ||||||| |||||||| | ||||| | || |||||||| |||||||||||||||||| Sbjct: 64933 gtcccaataccagaaactaaaccatcaactttacctcctgttcctttccagatttcaggt 64874 Query: 344 ccggttgtctc 354 || || ||||| Sbjct: 64873 ccagtggtctc 64863 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 364 ctttgggttagcagcattctcgaattgctgaaggatgtatgaattgggtgtctttattgc 423 |||||||||||||| ||||||||||| || ||||| |||| ||| |||||| ||| Sbjct: 64775 ctttgggttagcagggttctcgaattgttggaggataaatgagttgtttgtcttcgctgc 64716 Query: 424 cagctcttcggacttttggacaactcctttcattcccaaaagtgggtctgtgaggatcag 483 ||| ||||| | |||||||||| |||||||||||||||| |||||||| || || |||| Sbjct: 64715 cagttcttctgccttttggacagctcctttcattcccaagagtgggtcagtaagtatcaa 64656 Query: 484 ctcagcaccaaaagccttca 503 ||||||||||||||||||| Sbjct: 64655 ttcagcaccaaaagccttca 64636
>ref|NM_117574.2| Arabidopsis thaliana OASA1 AT4G14880 (OASA1) transcript variant AT4G14880.1 mRNA, complete cds Length = 1365 Score = 99.6 bits (50), Expect = 9e-18 Identities = 113/134 (84%) Strand = Plus / Minus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcct 328 |||||||||||||| | ||||| |||||||||| ||||||||| || || || |||||| Sbjct: 711 gtaatggtaccaccagtaccaatcccagaaacaaagccatcgattttgccaccagtgcct 652 Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctcgaat 388 ||||| || |||||||| || ||||||||||| ||||| ||||| |||| ||||| || Sbjct: 651 ttccatatctcaggtcccgtagtctcatagtggatcttagggttggcagggttctcaaac 592 Query: 389 tgctgaaggatgta 402 |||||||| ||||| Sbjct: 591 tgctgaagcatgta 578
>ref|NM_179055.2| Arabidopsis thaliana OASA1 AT4G14880 (OASA1) transcript variant AT4G14880.2 mRNA, complete cds Length = 1314 Score = 99.6 bits (50), Expect = 9e-18 Identities = 113/134 (84%) Strand = Plus / Minus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcct 328 |||||||||||||| | ||||| |||||||||| ||||||||| || || || |||||| Sbjct: 656 gtaatggtaccaccagtaccaatcccagaaacaaagccatcgattttgccaccagtgcct 597 Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctcgaat 388 ||||| || |||||||| || ||||||||||| ||||| ||||| |||| ||||| || Sbjct: 596 ttccatatctcaggtcccgtagtctcatagtggatcttagggttggcagggttctcaaac 537 Query: 389 tgctgaaggatgta 402 |||||||| ||||| Sbjct: 536 tgctgaagcatgta 523
>emb|X80376.2|ATOACLY Arabidopsis thaliana mRNA for O-acetylserine lyase (At.OAS.5-8) Length = 1253 Score = 99.6 bits (50), Expect = 9e-18 Identities = 113/134 (84%) Strand = Plus / Minus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcct 328 |||||||||||||| | ||||| |||||||||| ||||||||| || || || |||||| Sbjct: 621 gtaatggtaccaccagtaccaatcccagaaacaaagccatcgattttgccaccagtgcct 562 Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctcgaat 388 ||||| || |||||||| || ||||||||||| ||||| ||||| |||| ||||| || Sbjct: 561 ttccatatctcaggtcccgtagtctcatagtggatcttagggttggcagggttctcaaac 502 Query: 389 tgctgaaggatgta 402 |||||||| ||||| Sbjct: 501 tgctgaagcatgta 488
>gb|AY045825.1| Arabidopsis thaliana putative cytosolic O-acetylserine(thiol)lyase (At4g14880) mRNA, complete cds Length = 1254 Score = 99.6 bits (50), Expect = 9e-18 Identities = 113/134 (84%) Strand = Plus / Minus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcct 328 |||||||||||||| | ||||| |||||||||| ||||||||| || || || |||||| Sbjct: 634 gtaatggtaccaccagtaccaatcccagaaacaaagccatcgattttgccaccagtgcct 575 Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctcgaat 388 ||||| || |||||||| || ||||||||||| ||||| ||||| |||| ||||| || Sbjct: 574 ttccatatctcaggtcccgtagtctcatagtggatcttagggttggcagggttctcaaac 515 Query: 389 tgctgaaggatgta 402 |||||||| ||||| Sbjct: 514 tgctgaagcatgta 501
>emb|X84097.1|ATCYS3A A.thaliana mRNA for cysteine synthase Length = 1332 Score = 91.7 bits (46), Expect = 2e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcct 328 |||||||||||||| | ||||| |||||||||| |||||||| || || || |||||| Sbjct: 658 gtaatggtaccaccagtaccaatcccagaaacaaacccatcgattttgccaccagtgcct 599 Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctcgaat 388 ||||| || |||||||| || ||||||||||| ||||| ||||| |||| ||||| || Sbjct: 598 ttccatatctcaggtcccgtagtctcatagtggatcttagggttggcagggttctcaaac 539 Query: 389 tgctgaaggatgta 402 |||||||| ||||| Sbjct: 538 tgctgaagcatgta 525
>emb|AJ580401.1|AHA580401 Arabidopsis halleri subsp. halleri partial mRNA for putative o-acetylserine thiol lyase (oasa1 gene) Length = 916 Score = 89.7 bits (45), Expect = 8e-15 Identities = 93/109 (85%) Strand = Plus / Minus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcct 328 |||||||||||||| | ||||| |||||||||| |||||| || || || || |||||| Sbjct: 510 gtaatggtaccaccagtaccaatcccagaaacaaagccatcaattttgccaccagtgcct 451 Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttagcag 377 ||||| || |||||||| || ||||||||||| ||||| |||||||||| Sbjct: 450 ttccatatctcaggtccagtagtctcatagtggatcttagggttagcag 402
>emb|BX827385.1|CNS0A2GK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS48ZF11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1229 Score = 85.7 bits (43), Expect = 1e-13 Identities = 113/135 (83%), Gaps = 1/135 (0%) Strand = Plus / Minus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcct-gtgcc 327 |||||||||||||| | ||||| |||||||||| ||||||||| || || || ||||| Sbjct: 625 gtaatggtaccaccagtaccaatcccagaaacaaagccatcgattttgccacccagtgcc 566 Query: 328 tttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctcgaa 387 |||||| || |||||||| || ||||||||||| ||||| ||||| |||| ||||| || Sbjct: 565 tttccatatctcaggtcccgtagtctcatagtggatcttagggttggcagggttctcaaa 506 Query: 388 ttgctgaaggatgta 402 |||||||| ||||| Sbjct: 505 ctgctgaagcatgta 491
>emb|Y10847.1|BJY10847 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL6 Length = 1238 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 272 atggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcctttc 331 ||||||||||| | ||||| ||||||| || ||||||||| || || | ||||||||| Sbjct: 580 atggtaccaccagtaccaatcccagaaataaagccatcgattttaccctcagtgcctttc 521 Query: 332 cagatttcaggtccggttgtctcatagtgaatctttgggttagcag 377 || || |||||||| || ||||||||||| |||||||||||||||| Sbjct: 520 caaatctcaggtccagtagtctcatagtggatctttgggttagcag 475
>emb|Y10845.1|BJY10845 Brassica juncea mRNA for O-acetylserine(thiol) lyase, clone OAS-TL4 Length = 1280 Score = 83.8 bits (42), Expect = 5e-13 Identities = 90/106 (84%) Strand = Plus / Minus Query: 272 atggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcctttc 331 ||||||||||| | ||||| |||||||||| |||||||| ||||| | ||||||||| Sbjct: 630 atggtaccaccagtaccaatcccagaaacaaatccatcgatttttccatcagtgcctttc 571 Query: 332 cagatttcaggtccggttgtctcatagtgaatctttgggttagcag 377 || || |||||||| || ||||||||||| ||||||||||| |||| Sbjct: 570 catatctcaggtccagtagtctcatagtgtatctttgggttggcag 525
>emb|Z97337.2|ATFCA2 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 2 Length = 202860 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcct 328 |||||||||||||| | ||||| |||||||||| ||||||||| || || || |||||| Sbjct: 84212 gtaatggtaccaccagtaccaatcccagaaacaaagccatcgattttgccaccagtgcct 84271 Query: 329 ttccagatttcaggtccggttgtctcatagtgaatct 365 ||||| || |||||||| || ||||||||||| |||| Sbjct: 84272 ttccatatctcaggtcccgtagtctcatagtggatct 84308
>emb|AJ272027.1|ATH272027 Arabidopsis thaliana oasA1 gene for O-acetylserine (thiol) lyase A1, exons 1-11 Length = 5340 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Minus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcct 328 |||||||||||||| | ||||| |||||||||| ||||||||| || || || |||||| Sbjct: 3054 gtaatggtaccaccagtaccaatcccagaaacaaagccatcgattttgccaccagtgcct 2995 Query: 329 ttccagatttcaggtccggttgtctcatagtgaatct 365 ||||| || |||||||| || ||||||||||| |||| Sbjct: 2994 ttccatatctcaggtcccgtagtctcatagtggatct 2958
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 81.8 bits (41), Expect = 2e-12 Identities = 83/97 (85%) Strand = Plus / Plus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcct 328 |||||||||||||| | ||||| |||||||||| ||||||||| || || || |||||| Sbjct: 29666 gtaatggtaccaccagtaccaatcccagaaacaaagccatcgattttgccaccagtgcct 29725 Query: 329 ttccagatttcaggtccggttgtctcatagtgaatct 365 ||||| || |||||||| || ||||||||||| |||| Sbjct: 29726 ttccatatctcaggtcccgtagtctcatagtggatct 29762
>gb|AF044172.1|AF044172 Solanum tuberosum cysteine synthase mRNA, complete cds Length = 1308 Score = 75.8 bits (38), Expect = 1e-10 Identities = 77/90 (85%) Strand = Plus / Minus Query: 325 gcctttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctc 384 |||||||||||| ||||| || || ||||||||||| |||||||||||||||| || || Sbjct: 547 gcctttccagatctcaggaccagtggtctcatagtgtatctttgggttagcagggttttc 488 Query: 385 gaattgctgaaggatgtatgaattgggtgt 414 ||||||||||| || || || |||||||| Sbjct: 487 aaattgctgaagaatataggagttgggtgt 458
>gb|AY353092.1| Populus x canescens O-acetylserine (thiol)lyase mRNA, partial cds Length = 1192 Score = 73.8 bits (37), Expect = 5e-10 Identities = 151/189 (79%) Strand = Plus / Minus Query: 230 atattaggattttgctctttgaggtattttccagatccagtaatggtaccacctctccca 289 |||| ||| |||||||| ||||| || || || | |||||| || ||||| || |||| Sbjct: 509 atatcagggttttgctccttgagatacttccctgctccagttattgtacccccggtccct 450 Query: 290 atgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggtccggtt 349 || |||||||||| | |||| | || || |||| |||||||||||| || ||||| ||| Sbjct: 449 atcccagaaacaaaggcatcaactttcccacctgagcctttccagatctctggtccagtt 390 Query: 350 gtctcatagtgaatctttgggttagcagcattctcgaattgctgaaggatgtatgaattg 409 || |||||||||| ||||||||| |||| ||| || ||||| || || || || ||||| Sbjct: 389 gtgtcatagtgaacctttgggttggcaggattttcaaattgttgcagaatataagaatta 330 Query: 410 ggtgtcttt 418 ||||||||| Sbjct: 329 ggtgtcttt 321
>dbj|AB029511.2| Solanum tuberosum PCS-1 mRNA for cytosolic cysteine synthase, complete cds Length = 1354 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 325 gcctttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctc 384 |||||||||||| ||||| || || ||||||||||| |||||||||||||||| || || Sbjct: 597 gcctttccagatctcaggaccagtggtctcatagtgtatctttgggttagcagggttttc 538 Query: 385 gaattgctgaag 396 ||||||||||| Sbjct: 537 aaattgctgaag 526
>dbj|D28777.1|CNAPCCS7 Citrullus vulgaris mRNA for cysteine synthase, complete cds Length = 1855 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 311 atctttcctcctgtgcctttccagatttcaggtccggttgtctcatagtgaatctttggg 370 |||||||| |||| ||| ||||||| || || || || ||||||||||| ||||| ||| Sbjct: 1090 atctttccacctgagcccctccagatctctggaccagtggtctcatagtggatcttcggg 1031 Query: 371 ttagcagcattctcgaattgctgaaggatgtatgaattgggtgt 414 ||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1030 ttagcagggttttcaaattgctgaaggatgtaagaattaggtgt 987
>emb|X81697.1|ATCYTACS1 A.thaliana cytACS1 mRNA for cysteine synthase Length = 1278 Score = 67.9 bits (34), Expect = 3e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 269 gtaatggtaccacctctcccaatgccagaaacaaggccatcgatctttcctcctgtgcct 328 |||||||||||||| | ||||| |||||||||| ||||||||| || | || |||||| Sbjct: 658 gtaatggtaccaccagtaccaatcccagaaacaaagccatcgattttagcaccagtgcct 599 Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctcgaat 388 ||||| || |||||||| || | ||||||||| || | |||||| || | ||||| || Sbjct: 598 ttccatatctcaggtcccgtcggctcatagtggatttctgggttggccgggttctcaaac 539 Query: 389 tgctgaaggatgta 402 |||||||| ||||| Sbjct: 538 tgctgaagcatgta 525
>dbj|AB040503.1| Allium tuberosum Bsas1 mRNA for cysteine synthase, complete cds Length = 1671 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttag 374 ||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 925 ttccatatttcagggccggttgtctcataatgaatctttgggttag 880
>gb|BT014000.1| Lycopersicon esculentum clone 133047R, mRNA sequence Length = 1307 Score = 63.9 bits (32), Expect = 5e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 325 gcctttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctc 384 |||||||||||| ||||| || || || |||||||| |||||||||||||||| || || Sbjct: 571 gcctttccagatctcaggaccagtggtttcatagtgtatctttgggttagcagggttttc 512 Query: 385 gaattgctgaag 396 ||||||||||| Sbjct: 511 aaattgctgaag 500
>dbj|D10476.1|SPIOAL Spinach mRNA for O-acetylserine(thiol)-lyase, complete cds Length = 1281 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 314 tttcctcctgtgcctttccagatttcaggtccggttgtctcatagtgaatctttgggtta 373 ||||| |||||||||||||| ||||| ||||| ||||| ||||| |||| ||||||||| Sbjct: 575 tttccacctgtgcctttccaaatttctggtccagttgtttcataatgaacctttgggttg 516 Query: 374 gcag 377 |||| Sbjct: 515 gcag 512
>ref|XM_469737.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1343 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctcgaat 388 ||||| || |||||||| |||||||||||||| ||||||||||| |||| ||||| || Sbjct: 633 ttccaaatctcaggtccagttgtctcatagtggatctttgggtttgcagggttctcaaac 574 Query: 389 tgctgaaggatgta 402 ||||| || ||||| Sbjct: 573 tgctggagaatgta 560
>dbj|AK071279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084C02, full insert sequence Length = 1337 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctcgaat 388 ||||| || |||||||| |||||||||||||| ||||||||||| |||| ||||| || Sbjct: 622 ttccaaatctcaggtccagttgtctcatagtggatctttgggtttgcagggttctcaaac 563 Query: 389 tgctgaaggatgta 402 ||||| || ||||| Sbjct: 562 tgctggagaatgta 549
>gb|AF073697.1|AF073697 Oryza sativa cysteine synthase (rcs3) mRNA, complete cds Length = 1363 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 329 ttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctcgaat 388 ||||| || |||||||| |||||||||||||| ||||||||||| |||| ||||| || Sbjct: 647 ttccaaatctcaggtccagttgtctcatagtggatctttgggtttgcagggttctcaaac 588 Query: 389 tgctgaaggatgta 402 ||||| || ||||| Sbjct: 587 tgctggagaatgta 574
>gb|AY450295.1| Nicotiana plumbaginifolia cysteine synthase (Cs1) mRNA, partial cds Length = 1247 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 325 gcctttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctc 384 |||||||||||| ||||| || || ||||||||||| | ||||||||| |||| || || Sbjct: 507 gcctttccagatctcaggaccagtggtctcatagtgtacctttgggtttgcagggttttc 448 Query: 385 gaattgctgaaggatgtatgaattgggtgtctt 417 ||||||||||| || | || ||||||||||| Sbjct: 447 aaattgctgaagaataaaggagttgggtgtctt 415
>emb|AM087458.1| Nicotiana tabacum mRNA for putative cytosolic cysteine synthase 7 (oas7 gene) Length = 1256 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 325 gcctttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattctc 384 |||||||||||| ||||| || || ||||||||||| | ||||||||| |||| || || Sbjct: 567 gcctttccagatctcaggaccagtggtctcatagtgtacctttgggtttgcagggttttc 508 Query: 385 gaattgctgaag 396 ||||||||||| Sbjct: 507 aaattgctgaag 496
>gb|AY766094.1| Allium sativum cysteine synthase GCS3 (gcs3) mRNA, complete cds Length = 1296 Score = 52.0 bits (26), Expect = 0.002 Identities = 116/146 (79%) Strand = Plus / Minus Query: 224 accttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacct 283 ||||| ||||| |||||||||||||| | ||| | || | ||||||||| |||||||| Sbjct: 732 acctttatattgggattttgctcttttaaatatctccccgttccagtaatcgtaccacca 673 Query: 284 ctcccaatgccagaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggt 343 | ||||| |||| ||||| |||| || || || || | || |||||||| || || Sbjct: 672 gttccaataccagcaacaaaagcatcaattttccccccagacccattccagatctcgggg 613 Query: 344 ccggttgtctcatagtgaatctttgg 369 || ||||||||||||||||||||||| Sbjct: 612 ccagttgtctcatagtgaatctttgg 587
>dbj|AB029513.2| Solanum tuberosum PCS-2-2 mRNA for plastidic cysteine synthase 2, complete cds Length = 1375 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 322 tgtgcctttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcatt 381 |||| ||| |||||| || || || ||||| |||||||| ||||||||||| |||| ||| Sbjct: 753 tgtgtcttcccagatctctggacccgttgtttcatagtgtatctttgggttggcaggatt 694 Query: 382 ctcgaattgctgaaggat 399 || ||||| |||||||| Sbjct: 693 gtcaaattgttgaaggat 676
>gb|DQ336288.1| Vitis pseudoreticulata cysteine synthase mRNA, complete cds Length = 756 Score = 48.1 bits (24), Expect = 0.028 Identities = 78/96 (81%) Strand = Plus / Minus Query: 323 gtgcctttccagatttcaggtccggttgtctcatagtgaatctttgggttagcagcattc 382 |||||| ||||||| || ||||| || || ||||| |||||||| || || |||| || Sbjct: 515 gtgcctctccagatctcgggtccagtggtttcataatgaatcttcggattggcagggttt 456 Query: 383 tcgaattgctgaaggatgtatgaattgggtgtcttt 418 || ||||||||||| || || ||||| ||||||||| Sbjct: 455 tcaaattgctgaagaatataggaattaggtgtcttt 420
>gb|AC104663.3| Homo sapiens BAC clone RP11-713M6 from 4, complete sequence Length = 137625 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 237 gattttgctctttgaggtattttccagatc 266 ||||| ||| |||||||||||||||||||| Sbjct: 55329 gatttggctttttgaggtattttccagatc 55300
>gb|AC115109.2| Homo sapiens BAC clone RP11-78I10 from 2, complete sequence Length = 59356 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 attttgctctttgaggtatttt 259 |||||||||||||||||||||| Sbjct: 12166 attttgctctttgaggtatttt 12145
>gb|BC070775.1| Xenopus laevis hypothetical protein MGC83810, mRNA (cDNA clone MGC:83810 IMAGE:6642369), complete cds Length = 3984 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 atatttagcactaaaagaaat 180 ||||||||||||||||||||| Sbjct: 1861 atatttagcactaaaagaaat 1881
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 329 ttccagatttcaggtccggttgtctcatagtgaatct 365 ||||| || |||||||| |||||||||||||| |||| Sbjct: 30469415 ttccaaatctcaggtccagttgtctcatagtggatct 30469379
>ref|XM_745675.1| Aspergillus fumigatus Af293 C6 transcription factor PrnA (Afu6g08790) partial mRNA Length = 2412 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 ttgccagctcttcggactttt 440 ||||||||||||||||||||| Sbjct: 2198 ttgccagctcttcggactttt 2218
>gb|AC145868.2| Pan troglodytes BAC clone RP43-39F11 from 7, complete sequence Length = 209787 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 tatttagcactaaaagaaatg 181 ||||||||||||||||||||| Sbjct: 2571 tatttagcactaaaagaaatg 2591
>gb|AC074000.8| Homo sapiens BAC clone CTD-2023N18 from 7, complete sequence Length = 136723 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 tatttagcactaaaagaaatg 181 ||||||||||||||||||||| Sbjct: 122669 tatttagcactaaaagaaatg 122649
>emb|AL663085.5| Human DNA sequence from clone RP11-367H2 on chromosome 1 Contains part of the DAB1 gene for disabled homolog 1 (Drosophila), complete sequence Length = 31141 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 ggtattttccagatccagtaa 272 ||||||||||||||||||||| Sbjct: 21787 ggtattttccagatccagtaa 21767
>gb|AC131571.4| Homo sapiens chromosome 11, clone RP11-151O13, complete sequence Length = 179812 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 tatttagcactaaaagaaatg 181 ||||||||||||||||||||| Sbjct: 127146 tatttagcactaaaagaaatg 127126
>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome Length = 5064019 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 331 ccagatttcaggtccggttgtctcatagtgaatctttgggttagc 375 |||||||||||| ||||| |||| | |||||||| ||||||||| Sbjct: 997210 ccagatttcagggccggtggtcttttcgtgaatctctgggttagc 997254
>emb|AJ006024.1|CAR6024 Cicer arietinum mRNA for cysteine synthase, partial Length = 953 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Minus Query: 230 atattaggattttgctctttgaggtattttccagatccagtaatggtaccacc 282 ||||| |||||||||||||| || ||||| |||| || || ||||||||||| Sbjct: 433 atattgggattttgctctttaagatatttcccagcacctgttatggtaccacc 381 Score = 40.1 bits (20), Expect = 6.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 386 aattgctgaaggatgtatgaattgggtgtctt 417 ||||||||||| ||||| | |||||||||||| Sbjct: 277 aattgctgaagtatgtaggcattgggtgtctt 246
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 329 ttccagatttcaggtccggttgtctcatagtgaatct 365 ||||| || |||||||| |||||||||||||| |||| Sbjct: 7600 ttccaaatctcaggtccagttgtctcatagtggatct 7636
>gb|AC107311.8| Homo sapiens 3 BAC RP11-576M8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 192233 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 tatttagcactaaaagaaatg 181 ||||||||||||||||||||| Sbjct: 165632 tatttagcactaaaagaaatg 165612
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 291 tgccagaaacaaggccatcgatctt 315 ||||||||| ||||||||||||||| Sbjct: 900334 tgccagaaataaggccatcgatctt 900358
>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete sequence Length = 139872 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 329 ttccagatttcaggtccggttgtctcatagtgaatct 365 ||||| || |||||||| |||||||||||||| |||| Sbjct: 988 ttccaaatctcaggtccagttgtctcatagtggatct 952
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Minus Query: 329 ttccagatttcaggtccggttgtctcatagtgaatct 365 ||||| || |||||||| |||||||||||||| |||| Sbjct: 30560837 ttccaaatctcaggtccagttgtctcatagtggatct 30560801
>emb|Z83308.1|HSSRL11M2 Human DNA sequence from clone XX-SRL11M20 on chromosome 11, complete sequence Length = 44373 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 161 tatttagcactaaaagaaatg 181 ||||||||||||||||||||| Sbjct: 1528 tatttagcactaaaagaaatg 1548
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tattttccagatccagtaat 273 |||||||||||||||||||| Sbjct: 1624475 tattttccagatccagtaat 1624494
>gb|AC151281.3| Mus musculus BAC clone RP24-144E8 from chromosome 17, complete sequence Length = 171820 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 439 ttggacaactcctttcattcccaaaagt 466 ||||||||||| |||||||||| ||||| Sbjct: 39749 ttggacaactcatttcattccctaaagt 39722
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tattttccagatccagtaat 273 |||||||||||||||||||| Sbjct: 1817912 tattttccagatccagtaat 1817931
>gb|AC135320.6| Medicago truncatula clone mth2-28e9, complete sequence Length = 108644 Score = 40.1 bits (20), Expect = 6.8 Identities = 50/60 (83%) Strand = Plus / Plus Query: 223 aaccttgatattaggattttgctctttgaggtattttccagatccagtaatggtaccacc 282 |||||| ||||| | |||||||||||| || ||||| |||| || || ||||||||||| Sbjct: 101003 aacctttatattggaattttgctctttaagatatttcccagcaccggttatggtaccacc 101062
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tattttccagatccagtaat 273 |||||||||||||||||||| Sbjct: 1697708 tattttccagatccagtaat 1697727
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tattttccagatccagtaat 273 |||||||||||||||||||| Sbjct: 1655229 tattttccagatccagtaat 1655248
>gb|AC102076.9| Mus musculus chromosome 7, clone RP23-401P12, complete sequence Length = 199219 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 tttgaggtattttccagatc 266 |||||||||||||||||||| Sbjct: 65359 tttgaggtattttccagatc 65340
>emb|AL732464.19| Mouse DNA sequence from clone RP23-453F10 on chromosome 4, complete sequence Length = 192919 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 473 gtgaggatcagctcagcaccaaaa 496 ||||| |||||||||||||||||| Sbjct: 97625 gtgagcatcagctcagcaccaaaa 97648
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tattttccagatccagtaat 273 |||||||||||||||||||| Sbjct: 1658919 tattttccagatccagtaat 1658938
>tpg|BK000924.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M320, complete sequence Length = 11538 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cgatctttcctcctgtgcct 328 |||||||||||||||||||| Sbjct: 7790 cgatctttcctcctgtgcct 7809
>gb|AC092484.1|AC092484 Homo sapiens clone RP11-114K22, complete sequence Length = 73900 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 actcctttcattcccaaaag 465 |||||||||||||||||||| Sbjct: 67770 actcctttcattcccaaaag 67789
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cgatctttcctcctgtgcct 328 |||||||||||||||||||| Sbjct: 23429457 cgatctttcctcctgtgcct 23429476
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tattttccagatccagtaat 273 |||||||||||||||||||| Sbjct: 1664102 tattttccagatccagtaat 1664121
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cgatctttcctcctgtgcct 328 |||||||||||||||||||| Sbjct: 155155 cgatctttcctcctgtgcct 155174
>gb|AY112530.1| Zea mays CL5251_1 mRNA sequence Length = 1258 Score = 40.1 bits (20), Expect = 6.8 Identities = 56/68 (82%) Strand = Plus / Minus Query: 350 gtctcatagtgaatctttgggttagcagcattctcgaattgctgaaggatgtatgaattg 409 |||||||| || | ||| ||||| |||| || ||||| || ||||| ||||| |||||| Sbjct: 473 gtctcataatgtaccttagggttggcagggttatcgaactgttgaagcatgtaagaattg 414 Query: 410 ggtgtctt 417 |||||||| Sbjct: 413 ggtgtctt 406
>dbj|AB029512.2| Solanum tuberosum PCS-2-1 mRNA for plastidic cysteine synthase 1, complete cds Length = 1378 Score = 40.1 bits (20), Expect = 6.8 Identities = 128/164 (78%) Strand = Plus / Minus Query: 236 ggattttgctctttgaggtattttccagatccagtaatggtaccacctctcccaatgcca 295 |||||||||||||| ||| || || | ||| |||||||| ||||| | ||||||||| Sbjct: 839 ggattttgctctttaaggaatcggcctgttcctgtaatggttccaccagttccaatgcca 780 Query: 296 gaaacaaggccatcgatctttcctcctgtgcctttccagatttcaggtccggttgtctca 355 | |||||| || ||||| ||| |||| ||| |||||| || || || ||||| ||| Sbjct: 779 gcaacaagtatgtcaatcttgccttttgtgtcttcccagatctctggacccgttgtttca 720 Query: 356 tagtgaatctttgggttagcagcattctcgaattgctgaaggat 399 ||||| ||||| ||||| || | ||| || ||||| |||||||| Sbjct: 719 tagtgtatcttggggttggcgggattgtcaaattgttgaaggat 676
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tattttccagatccagtaat 273 |||||||||||||||||||| Sbjct: 2332293 tattttccagatccagtaat 2332312
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tattttccagatccagtaat 273 |||||||||||||||||||| Sbjct: 2257008 tattttccagatccagtaat 2257027
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 tattttccagatccagtaat 273 |||||||||||||||||||| Sbjct: 1440436 tattttccagatccagtaat 1440417
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 tattttccagatccagtaat 273 |||||||||||||||||||| Sbjct: 1537612 tattttccagatccagtaat 1537593 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,497,462 Number of Sequences: 3902068 Number of extensions: 3497462 Number of successful extensions: 60580 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 60198 Number of HSP's gapped (non-prelim): 372 length of query: 505 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 483 effective length of database: 17,147,199,772 effective search space: 8282097489876 effective search space used: 8282097489876 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)