ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart19c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BACH2_HUMAN (Q9BYV9) Transcription regulator protein BACH2 (BTB ... 34 0.076

>BACH2_HUMAN (Q9BYV9) Transcription regulator protein BACH2 (BTB and CNC homolog|
           2)
          Length = 841

 Score = 34.3 bits (77), Expect = 0.076
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 241 LTGDHLPGRFR*KCLCSCPRCQICSAHPPLSMRTK 345
           L  DHLPGR R    C  P  ++C   PPL  RT+
Sbjct: 485 LMADHLPGRMRPNTSCPVP-IKVCPRSPPLETRTR 518


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,882,907
Number of Sequences: 219361
Number of extensions: 988045
Number of successful extensions: 2030
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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