>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 19/65 (29%), Positives = 25/65 (38%)
 Frame = +3

Query: 126 PKQN*TPIQKQEPIILPGLFVIHPPIRGLQKPENACQDHWEYAWPGTATGLSSPPRRKPA 305
           P++   P QK +  + P      PP      PE A  D      P   T +  PPR+K  
Sbjct: 793 PREKPAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPRKKTPIQKPPRKKSR 852

Query: 306 YHLGE 320
              GE
Sbjct: 853 EAAGE 857

>M3K13_PONPY (Q5R8X7) Mitogen-activated protein kinase kinase kinase 13 (EC|
           2.7.11.25)
          Length = 966

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = +2

Query: 128 QAKLNSHPKTRTNHPPRLIRHPSSYSGATKA*KCVPRSLGIRLAGDSHRPELAATEEAGI 307
           QA    +P T   HP R I HP++     K  K VP   G++    + RP+L  +E  GI
Sbjct: 505 QAVEKKYPGTYKRHPVRPIIHPNAMEKLMKR-KGVPHKSGMQ----TKRPDLLRSE--GI 557

Query: 308 P 310
           P
Sbjct: 558 P 558

>M3K13_HUMAN (O43283) Mitogen-activated protein kinase kinase kinase 13 (EC|
           2.7.11.25) (Mixed lineage kinase) (MLK) (Leucine
           zipper-bearing kinase)
          Length = 966

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = +2

Query: 128 QAKLNSHPKTRTNHPPRLIRHPSSYSGATKA*KCVPRSLGIRLAGDSHRPELAATEEAGI 307
           QA    +P T   HP R I HP++     K  K VP   G++    + RP+L  +E  GI
Sbjct: 505 QAVEKKYPGTYKRHPVRPIIHPNAMEKLMKR-KGVPHKSGMQ----TKRPDLLRSE--GI 557

Query: 308 P 310
           P
Sbjct: 558 P 558

>OPSR_XENLA (O12948) Red-sensitive opsin (Red cone photoreceptor pigment)|
          Length = 365

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
 Frame = -2

Query: 238 SWHAFSGFCSPRIGGWMTNKPGRMIGSCFW-MGVQFCLGSRIYTSASLESIVPYPL*MFI 62
           SW   +G+C+P + GW          S FW  G++   G  +++ +S   +  Y L + I
Sbjct: 175 SWVWSAGWCAPPMFGW----------SRFWPHGLKTSCGPDVFSGSSDPGVQSYMLVLMI 224

Query: 61  LMYV--LKILIYFDMYTWCRI 5
              +  L I+I   ++ W  I
Sbjct: 225 TCCIIPLAIIILCYLHVWWTI 245

>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent|
           regulator of chromatin subfamily A member 3-like 3 (EC
           3.6.1.-) (SMARCA3-like protein 3)
          Length = 1277

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = -1

Query: 98  GVDCSLSIINVHPDVCAENINIFRYVYMVSD 6
           G DC++ +  V P++C +N+ + +   M++D
Sbjct: 178 GCDCNVKVEVVDPELCVDNLVVVKEEEMIAD 208

>SGO1_YEAST (Q08490) Shugoshin|
          Length = 590

 Score = 28.1 bits (61), Expect = 5.8
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 3/26 (11%)
 Frame = +2

Query: 113 INPTAQAKLNSHPKTRTNH---PPRL 181
           + P++ +  NSHPKT+  H   PPR+
Sbjct: 316 VYPSSSSSTNSHPKTKIKHSMKPPRI 341

>PT494_SACBA (O59961) COX3 mRNA-specific translational activator PET494|
          Length = 489

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 126 AVGFIHLLLWSRLFLIHYKCSS 61
           ++G +  LLW RL+ +HYK ++
Sbjct: 9   SIGTVWRLLWKRLYSVHYKTNT 30

>PSAB_AMPCA (P58383) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 644

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -3

Query: 180 SLGG*LVLVFGWEF---NFAWAVGFIHLLLW 97
           SLG   + V+ W F   + AWA GF+ L+ W
Sbjct: 549 SLGSNDLAVWAWAFLLAHLAWATGFMFLISW 579

>6PGL_XYLFA (Q9PEG5) 6-phosphogluconolactonase (EC 3.1.1.31) (6PGL)|
          Length = 239

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 320 LPQVVCRLPPWRRAQAGGCPRPGVFPV 240
           LP+ +  L P+    A GCP  GV+P+
Sbjct: 154 LPKAISTLQPYVALDATGCPGAGVWPL 180

>TT8_ARATH (Q9FT81) TRANSPARENT TESTA 8 protein (Basic helix-loop-helix|
           protein 42) (bHLH42) (AtbHLH042)
          Length = 518

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 318 PPSGMPASSVAASSGRWLSPARRIPS 241
           PPSGMP  + A     WLS A  + S
Sbjct: 127 PPSGMPGKAYARRKHVWLSGANEVDS 152

>PSBZ_ADICA (Q85FM4) Photosystem II reaction center Z protein|
          Length = 62

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 217 FCSPRIGGWMTNKPGRMIGSCFWMGVQFCLG 125
           F SP  GGW  NK     G+  W+G+ F +G
Sbjct: 27  FASP--GGWSDNKNIVFSGASLWIGLVFLVG 55

>OPN4_PHOSU (Q5XXP2) Melanopsin (Opsin-4)|
          Length = 469

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = -2

Query: 208 PRIGGWMTNKPGRMIGSCFWMGVQFCLGSRIYTSASLESIVPYPL*MFILMYV 50
           P   GW    P  ++ SC W  V F    R YT      +   PL + I  Y+
Sbjct: 203 PPFFGWSAYVPEGLLTSCSWDYVTFTPQVRAYTMLLFCFVFFLPLLVIIFCYI 255

>FAT2_RAT (O88277) Protocadherin Fat 2 precursor (Multiple epidermal growth|
            factor-like domains 1)
          Length = 4351

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = +3

Query: 159  EPIIL---PGLFVIHPPIRGLQKPENACQDHWEYAWPGTATGLSSP-PRR 296
            EPII     G  +++P    +  P  + + HWEY  P T  G   P PRR
Sbjct: 4162 EPIIKRTWSGEELVYPSGAAVWPPTYSRKKHWEYPHPETMQGTLPPSPRR 4211

>HNRPL_HUMAN (P14866) Heterogeneous nuclear ribonucleoprotein L (hnRNP L)|
          Length = 558

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 116 NPTAQAKLNSHPKTRTNHPPRLIRHPSSYSG 208
           N + Q    S+P  R   PP L  HP+ Y G
Sbjct: 258 NLSGQGDPGSNPNKRQRQPPLLGDHPAEYGG 288

>HNRPL_MOUSE (Q8R081) Heterogeneous nuclear ribonucleoprotein L (hnRNP L)|
          Length = 555

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 116 NPTAQAKLNSHPKTRTNHPPRLIRHPSSYSG 208
           N + Q    S+P  R   PP L  HP+ Y G
Sbjct: 255 NLSGQGDPGSNPNKRQRQPPLLGDHPAEYGG 285

>BFSP2_HUMAN (Q13515) Phakinin (Beaded filament structural protein 2) (Lens|
           fiber cell beaded filament protein CP 49) (CP49) (49 kDa
           cytoskeletal protein) (CP 47) (CP47) (Lens intermediate
           filament-like light) (LIFL-L)
          Length = 415

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 95  LQRSRCI--NPTAQAKLNSHPKTRTNHPPRLIRHPSSYSG 208
           LQR R     P + + L S P +RTN    L+R P  Y G
Sbjct: 20  LQRRRASFRGPRSSSSLESPPASRTNAMSGLVRAPGVYVG 59

>Y451_MYCPN (Q50361) Hypothetical protein MG316 homolog (H08_orf369)|
          Length = 369

 Score = 27.3 bits (59), Expect = 9.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 61  LMYVLKILIYFDMYTWCRIW 2
           L+Y +  + Y+D   WCR W
Sbjct: 335 LLYTVGTVFYYDRSLWCRYW 354


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,047,040
Number of Sequences: 219361
Number of extensions: 1216977
Number of successful extensions: 3054
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3050
length of database: 80,573,946
effective HSP length: 82
effective length of database: 62,586,344
effective search space used: 1502072256
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)