ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart19b09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066695.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 2e-58
2dbj|AK063158.1| Oryza sativa (japonica cultivar-group) cDNA clon... 234 2e-58
3dbj|AB070254.1| Oryza sativa (japonica cultivar-group) OsRPT4b m... 234 2e-58
4gb|AY112008.1| Zea mays CL39798_1 mRNA sequence 161 3e-36
5ref|XM_464508.1| Oryza sativa (japonica cultivar-group), mRNA 155 2e-34
6dbj|AK104698.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
7dbj|AK099357.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
8dbj|AK067026.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
9dbj|AB033536.1| Oryza sativa (japonica cultivar-group) OsRPT4 mR... 155 2e-34
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
11dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
12dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
13gb|DQ191627.1| Solanum tuberosum 26S proteasome AAA-ATPase subun... 105 1e-19
14dbj|AB061249.1| Solanum tuberosum StRPT4a mRNA for 26S proteasom... 105 1e-19
15gb|BT018476.1| Zea mays clone EL01N0423G12.d mRNA sequence 101 2e-18
16gb|BT017713.1| Zea mays clone EL01N0446G05.c mRNA sequence 101 2e-18
17ref|NM_123667.2| Arabidopsis thaliana RPT4A; ATPase AT5G43010 (R... 98 3e-17
18gb|AY078040.1| Arabidopsis thaliana AT5g43010/MBD2_21 mRNA, comp... 98 3e-17
19dbj|AK220732.1| Arabidopsis thaliana mRNA for 26S proteasome AAA... 98 3e-17
20gb|AF372945.1|AF372945 Arabidopsis thaliana AT5g43010/MBD2_21 mR... 98 3e-17
21emb|BX830758.1|CNS0A0SI Arabidopsis thaliana Full-length cDNA Co... 98 3e-17
22gb|AF123393.1|AF123393 Arabidopsis thaliana 26S proteasome AAA-A... 98 3e-17
23gb|AY109445.1| Zea mays CL337_1 mRNA sequence 94 5e-16
24gb|AY241962.1| Dermacentor variabilis 26S proteasome regulatory ... 88 3e-14
25dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
26dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
27dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
28dbj|AB120534.1| Nicotiana tabacum mRNA, transcriptionally up-reg... 78 3e-11
29ref|NM_103580.3| Arabidopsis thaliana ATP binding / ATPase/ hydr... 68 3e-08
30gb|AY114673.1| Arabidopsis thaliana 26S proteasome AAA-ATPase su... 68 3e-08
31gb|AY062709.1| Arabidopsis thaliana similar to 26S proteasome AA... 68 3e-08
32ref|NM_132080.2| Drosophila melanogaster Rpt4 CG3455-RA (Rpt4), ... 66 1e-07
33gb|AF145310.1|AF145310 Drosophila melanogaster 26S proteasome re... 66 1e-07
34ref|XM_812559.1| Trypanosoma cruzi strain CL Brener 26S protease... 62 2e-06
35gb|AY348234.1| Drosophila crucigera RPT4 (Rpt4) gene, partial cds 60 7e-06
36emb|BX815467.1|CNS0ABDM Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
37gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana... 60 7e-06
38gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete s... 58 3e-05
39gb|AY071182.1| Drosophila melanogaster RE23388 full length cDNA 58 3e-05
40ref|XM_808730.1| Trypanosoma cruzi strain CL Brener 26S protease... 56 1e-04
41gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell... 56 1e-04
42gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell ... 56 1e-04
43gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 ... 56 1e-04
44gb|AY348236.1| Drosophila bipolita RPT4 (Rpt4) gene, partial cds 48 0.028
45gb|AY348235.1| Drosophila canipolita RPT4 (Rpt4) gene, partial cds 48 0.028
46gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, co... 46 0.11
47ref|XM_962695.1| PREDICTED: Tribolium castaneum similar to CG345... 46 0.11
48emb|CR931792.9| Zebrafish DNA sequence from clone DKEY-180L1 in ... 44 0.44
49emb|CR731783.2|CNS0GRL8 Tetraodon nigroviridis full-length cDNA 44 0.44
50emb|CR731667.2|CNS0GRI0 Tetraodon nigroviridis full-length cDNA 44 0.44
51emb|CR728890.2|CNS0GPCW Tetraodon nigroviridis full-length cDNA 44 0.44
52emb|CR727745.2|CNS0GOH3 Tetraodon nigroviridis full-length cDNA 44 0.44
53emb|CR727398.2|CNS0GO7G Tetraodon nigroviridis full-length cDNA 44 0.44
54emb|CR685292.1|CNS0FRQ0 Tetraodon nigroviridis full-length cDNA 44 0.44
55emb|CR679775.2|CNS0FNGR Tetraodon nigroviridis full-length cDNA 44 0.44
56emb|CR679558.2|CNS0FNAQ Tetraodon nigroviridis full-length cDNA 44 0.44
57emb|CR676800.2|CNS0FL6K Tetraodon nigroviridis full-length cDNA 44 0.44
58emb|CR675817.2|CNS0FKFJ Tetraodon nigroviridis full-length cDNA 44 0.44
59emb|CR675913.1|CNS0FKI7 Tetraodon nigroviridis full-length cDNA 44 0.44
60emb|CR675385.2|CNS0FK3J Tetraodon nigroviridis full-length cDNA 44 0.44
61emb|CR674301.2|CNS0FJ9F Tetraodon nigroviridis full-length cDNA 44 0.44
62emb|CR672027.2|CNS0FHI9 Tetraodon nigroviridis full-length cDNA 44 0.44
63emb|CR671714.2|CNS0FH9K Tetraodon nigroviridis full-length cDNA 44 0.44
64emb|CR670430.2|CNS0FG9W Tetraodon nigroviridis full-length cDNA 44 0.44
65emb|CR667294.2|CNS0FDUS Tetraodon nigroviridis full-length cDNA 44 0.44
66emb|CR666785.2|CNS0FDGN Tetraodon nigroviridis full-length cDNA 44 0.44
67emb|CR666640.2|CNS0FDCM Tetraodon nigroviridis full-length cDNA 44 0.44
68emb|CR664610.2|CNS0FBS8 Tetraodon nigroviridis full-length cDNA 44 0.44
69emb|CR665620.2|CNS0FCKA Tetraodon nigroviridis full-length cDNA 44 0.44
70emb|CR665248.2|CNS0FC9Y Tetraodon nigroviridis full-length cDNA 44 0.44
71emb|CR660805.2|CNS0F8UJ Tetraodon nigroviridis full-length cDNA 44 0.44
72emb|CR659548.2|CNS0F7VM Tetraodon nigroviridis full-length cDNA 44 0.44
73emb|CR658573.2|CNS0F74J Tetraodon nigroviridis full-length cDNA 44 0.44
74emb|CR657800.2|CNS0F6J2 Tetraodon nigroviridis full-length cDNA 44 0.44
75emb|CR657024.2|CNS0F5XI Tetraodon nigroviridis full-length cDNA 44 0.44
76dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.44
77gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosom... 40 6.9
78gb|BC073644.1| Xenopus laevis similar to proteasome 26S ATPase s... 40 6.9
79gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 6.9
80gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome... 40 6.9
81gb|BC045087.1| Xenopus laevis similar to proteasome 26S ATPase s... 40 6.9
82emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chro... 40 6.9
83ref|XM_502698.1| Yarrowia lipolytica CLIB122, YALI0D11418g predi... 40 6.9
84emb|AL355589.8| Human DNA sequence from clone RP11-168F17 on chr... 40 6.9
85emb|BX548246.17| Zebrafish DNA sequence from clone CH211-274P15 ... 40 6.9
86ref|NM_200862.1| Danio rerio zgc:77855 (zgc:77855), mRNA 40 6.9
87dbj|AK163154.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 40 6.9
88gb|AY208828.1| Rhipicephalus appendiculatus proteasome-like prot... 40 6.9
89emb|BX682545.5| Mouse DNA sequence from clone RP23-311B24 on chr... 40 6.9
90gb|BC062862.1| Danio rerio zgc:77855, mRNA (cDNA clone MGC:77855... 40 6.9
91emb|BX927255.9| Zebrafish DNA sequence from clone CH211-266I18 i... 40 6.9
92emb|BX537272.5| Zebrafish DNA sequence from clone DKEY-25E12 in ... 40 6.9
93gb|AC006952.6|AC006952 Homo sapiens chromosome 9, clone hRPK.374... 40 6.9
94gb|AE015925.1| Chlamydophila caviae GPIC, complete genome 40 6.9
95emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 6.9
96emb|AL049849.1|HSB1L1C6 Homo sapiens chromosome 21 BAC B1L1C6, c... 40 6.9
97emb|AL671995.4| Mouse DNA sequence from clone RP23-109E24 on chr... 40 6.9 
>dbj|AK066695.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074G13, full
            insert sequence
          Length = 1556

 Score =  234 bits (118), Expect = 2e-58
 Identities = 193/218 (88%)
 Strand = Plus / Minus

                                                                        
Query: 286  tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 345
            ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 1307 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 1248

                                                                        
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 405
            || ||||||||||||||||| ||||| || ||||| ||||| |||||||||||||| |||
Sbjct: 1247 ttgcgcaccgccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagca 1188

                                                                        
Query: 406  gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 465
            ||||||||||||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 1187 gccatgccagcctcagtgcagacattgcgcagatcggcaccattgaagccttcagctagc 1128

                                                  
Query: 466  ttaaccacagcctcgtaatcaatttcaccatgcttagc 503
            || || ||||| || ||||| ||||||||||| |||||
Sbjct: 1127 ttcacgacagcttcataatcgatttcaccatgtttagc 1090
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>dbj|AK063158.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-C12, full
            insert sequence
          Length = 1695

 Score =  234 bits (118), Expect = 2e-58
 Identities = 193/218 (88%)
 Strand = Plus / Minus

                                                                        
Query: 286  tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 345
            ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 1310 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 1251

                                                                        
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 405
            || ||||||||||||||||| ||||| || ||||| ||||| |||||||||||||| |||
Sbjct: 1250 ttgcgcaccgccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagca 1191

                                                                        
Query: 406  gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 465
            ||||||||||||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 1190 gccatgccagcctcagtgcagacattgcgcagatcggcaccattgaagccttcagctagc 1131

                                                  
Query: 466  ttaaccacagcctcgtaatcaatttcaccatgcttagc 503
            || || ||||| || ||||| ||||||||||| |||||
Sbjct: 1130 ttcacgacagcttcataatcgatttcaccatgtttagc 1093
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>dbj|AB070254.1| Oryza sativa (japonica cultivar-group) OsRPT4b mRNA for 26S
            proteasome regulatory particle triple-A ATPase subunit4b,
            partial cds
          Length = 1390

 Score =  234 bits (118), Expect = 2e-58
 Identities = 193/218 (88%)
 Strand = Plus / Minus

                                                                        
Query: 286  tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 345
            ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 1131 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 1072

                                                                        
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 405
            || ||||||||||||||||| ||||| || ||||| ||||| |||||||||||||| |||
Sbjct: 1071 ttgcgcaccgccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagca 1012

                                                                        
Query: 406  gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 465
            ||||||||||||||||||||||||||||| |||||||||||||||||||| || || |||
Sbjct: 1011 gccatgccagcctcagtgcagacattgcgcagatcggcaccattgaagccttcagctagc 952

                                                  
Query: 466  ttaaccacagcctcgtaatcaatttcaccatgcttagc 503
            || || ||||| || ||||| ||||||||||| |||||
Sbjct: 951  ttcacgacagcttcataatcgatttcaccatgtttagc 914
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>gb|AY112008.1| Zea mays CL39798_1 mRNA sequence
          Length = 728

 Score =  161 bits (81), Expect = 3e-36
 Identities = 186/221 (84%)
 Strand = Plus / Plus

                                                                       
Query: 286 tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 345
           ||||| || ||||| |||||||||||||| |||||||||||||||||||| |||||||  
Sbjct: 257 tccttgccgaagtcagcactgtagtgcgcactggactcgagcttcttggcatcattcagc 316

                                                                       
Query: 346 ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 405
           || ||||| |||||||||||||| ||||| ||||| ||||||||||| ||||| || |||
Sbjct: 317 ttgcgcacagccttcatgaagtcctcgtgaatgacatagtcacgctccgctcggatagca 376

                                                                       
Query: 406 gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 465
           |||||||| || || ||||| |  ||||| | |||||| |||||||||||||| || || 
Sbjct: 377 gccatgccggcttctgtgcacaagttgcgcatatcggctccattgaagccctcagctagt 436

                                                    
Query: 466 ttaaccacagcctcgtaatcaatttcaccatgcttagcgat 506
           || || ||||| || || ||||| || |||||||| |||||
Sbjct: 437 ttgactacagcttcatagtcaatctccccatgctttgcgat 477
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>ref|XM_464508.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1693

 Score =  155 bits (78), Expect = 2e-34
 Identities = 174/206 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcacc 354
            ||||| ||||||||||| |||||||| || |||||||||||||| ||||  ||||  || 
Sbjct: 1267 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttcagcttcctgaca 1208

                                                                        
Query: 355  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 414
            |||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || 
Sbjct: 1207 gccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccataccc 1148

                                                                        
Query: 415  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 474
            || ||||||||||| ||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 1147 gcttcagtgcagacgttgcgaagatcagccccattgaagccctcagccagtttaacaact 1088

                                      
Query: 475  gcctcgtaatcaatttcaccatgctt 500
            ||||| ||||||||||| ||||||||
Sbjct: 1087 gcctcataatcaatttctccatgctt 1062
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>dbj|AK104698.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C01, full
           insert sequence
          Length = 1326

 Score =  155 bits (78), Expect = 2e-34
 Identities = 174/206 (84%)
 Strand = Plus / Minus

                                                                       
Query: 295 aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcacc 354
           ||||| ||||||||||| |||||||| || |||||||||||||| ||||  ||||  || 
Sbjct: 900 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttcagcttcctgaca 841

                                                                       
Query: 355 gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 414
           |||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || 
Sbjct: 840 gccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccataccc 781

                                                                       
Query: 415 gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 474
           || ||||||||||| ||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 780 gcttcagtgcagacgttgcgaagatcagccccattgaagccctcagccagtttaacaact 721

                                     
Query: 475 gcctcgtaatcaatttcaccatgctt 500
           ||||| ||||||||||| ||||||||
Sbjct: 720 gcctcataatcaatttctccatgctt 695
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>dbj|AK099357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041G07, full
            insert sequence
          Length = 1692

 Score =  155 bits (78), Expect = 2e-34
 Identities = 174/206 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcacc 354
            ||||| ||||||||||| |||||||| || |||||||||||||| ||||  ||||  || 
Sbjct: 1266 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttcagcttcctgaca 1207

                                                                        
Query: 355  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 414
            |||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || 
Sbjct: 1206 gccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccataccc 1147

                                                                        
Query: 415  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 474
            || ||||||||||| ||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 1146 gcttcagtgcagacgttgcgaagatcagccccattgaagccctcagccagtttaacaact 1087

                                      
Query: 475  gcctcgtaatcaatttcaccatgctt 500
            ||||| ||||||||||| ||||||||
Sbjct: 1086 gcctcataatcaatttctccatgctt 1061
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>dbj|AK067026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091H06, full
            insert sequence
          Length = 1718

 Score =  155 bits (78), Expect = 2e-34
 Identities = 174/206 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcacc 354
            ||||| ||||||||||| |||||||| || |||||||||||||| ||||  ||||  || 
Sbjct: 1349 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttcagcttcctgaca 1290

                                                                        
Query: 355  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 414
            |||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || 
Sbjct: 1289 gccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccataccc 1230

                                                                        
Query: 415  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 474
            || ||||||||||| ||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 1229 gcttcagtgcagacgttgcgaagatcagccccattgaagccctcagccagtttaacaact 1170

                                      
Query: 475  gcctcgtaatcaatttcaccatgctt 500
            ||||| ||||||||||| ||||||||
Sbjct: 1169 gcctcataatcaatttctccatgctt 1144
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>dbj|AB033536.1| Oryza sativa (japonica cultivar-group) OsRPT4 mRNA for 26S proteasome
            regulatory particle triple-A ATPase subunit4, complete
            cds
          Length = 1637

 Score =  155 bits (78), Expect = 2e-34
 Identities = 174/206 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcacc 354
            ||||| ||||||||||| |||||||| || |||||||||||||| ||||  ||||  || 
Sbjct: 1267 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttcagcttcctgaca 1208

                                                                        
Query: 355  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 414
            |||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || 
Sbjct: 1207 gccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccataccc 1148

                                                                        
Query: 415  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 474
            || ||||||||||| ||||||||||| || |||||||||||||| || || ||||| || 
Sbjct: 1147 gcttcagtgcagacgttgcgaagatcagccccattgaagccctcagccagtttaacaact 1088

                                      
Query: 475  gcctcgtaatcaatttcaccatgctt 500
            ||||| ||||||||||| ||||||||
Sbjct: 1087 gcctcataatcaatttctccatgctt 1062
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  147 bits (74), Expect = 4e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                            
Query: 356      ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 415
                |||||||||| ||||| || ||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 23802386 ccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagcagccatgccag 23802327

                                                          
Query: 416      cctcagtgcagacattgcgaagatcggcaccattgaagccct 457
                ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 23802326 cctcagtgcagacattgcgcagatcggcaccattgaagccct 23802285



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                            
Query: 286      tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 345
                ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 23802560 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 23802501

                             
Query: 346      ttccgcaccgcct 358
                || ||||||||||
Sbjct: 23802500 ttgcgcaccgcct 23802488
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>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0029C06
          Length = 156500

 Score =  147 bits (74), Expect = 4e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                          
Query: 356    ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 415
              |||||||||| ||||| || ||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 150462 ccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagcagccatgccag 150403

                                                        
Query: 416    cctcagtgcagacattgcgaagatcggcaccattgaagccct 457
              ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 150402 cctcagtgcagacattgcgcagatcggcaccattgaagccct 150361



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                          
Query: 286    tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 345
              ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 150636 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 150577

                           
Query: 346    ttccgcaccgcct 358
              || ||||||||||
Sbjct: 150576 ttgcgcaccgcct 150564
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>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0556B08
          Length = 136775

 Score =  147 bits (74), Expect = 4e-32
 Identities = 95/102 (93%)
 Strand = Plus / Minus

                                                                         
Query: 356   ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 415
             |||||||||| ||||| || ||||| ||||| |||||||||||||| |||||||||||||
Sbjct: 42051 ccttcatgaaatcttcatgaatgacatagtcgcgctctgctcgaatagcagccatgccag 41992

                                                       
Query: 416   cctcagtgcagacattgcgaagatcggcaccattgaagccct 457
             ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 41991 cctcagtgcagacattgcgcagatcggcaccattgaagccct 41950



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 64/73 (87%)
 Strand = Plus / Minus

                                                                         
Query: 286   tccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattcaat 345
             ||||| |||||||| || ||||||||||| || |||||||||||||||||||| ||||  
Sbjct: 42225 tccttgccaaagtccgcgctgtagtgcgcactagactcgagcttcttggcgtcgttcagc 42166

                          
Query: 346   ttccgcaccgcct 358
             || ||||||||||
Sbjct: 42165 ttgcgcaccgcct 42153
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>gb|DQ191627.1| Solanum tuberosum 26S proteasome AAA-ATPase subunit RPT4a-like
            protein mRNA, complete cds
          Length = 1567

 Score =  105 bits (53), Expect = 1e-19
 Identities = 176/217 (81%)
 Strand = Plus / Minus

                                                                        
Query: 281  cttagtccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcat 340
            |||| ||||||||||| || ||||||||||| || || || || || ||||| || ||||
Sbjct: 1267 cttattccttaccaaaatcagcactgtagtgagcacttgattcaagtttctttgcttcat 1208

                                                                        
Query: 341  tcaatttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaa 400
            ||| |||||  || ||||||||||| || || |||||||| || ||||||||||| ||||
Sbjct: 1207 tcagtttccttacagccttcatgaaatcctcatggatgacataatcacgctctgcacgaa 1148

                                                                        
Query: 401  tggcagccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcgg 460
            | |||  ||| || || |||||||| ||||| || | ||| || ||||| || ||||| |
Sbjct: 1147 ttgcaaacataccggcttcagtgcaaacattccgcatatcagccccattaaatccctcag 1088

                                                 
Query: 461  caagcttaaccacagcctcgtaatcaatttcaccatg 497
            | |||||||   ||||||| |||||||||||||||||
Sbjct: 1087 cgagcttaatagcagcctcataatcaatttcaccatg 1051
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>dbj|AB061249.1| Solanum tuberosum StRPT4a mRNA for 26S proteasome AAA-ATPase subunit
            RPT4a, complete cds
          Length = 1484

 Score =  105 bits (53), Expect = 1e-19
 Identities = 176/217 (81%)
 Strand = Plus / Minus

                                                                        
Query: 281  cttagtccttaccaaagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcat 340
            |||| ||||||||||| || ||||||||||| || || || || || ||||| || ||||
Sbjct: 1255 cttattccttaccaaaatcagcactgtagtgagcacttgattcaagtttctttgcttcat 1196

                                                                        
Query: 341  tcaatttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaa 400
            ||| |||||  || ||||||||||| || || |||||||| || ||||||||||| ||||
Sbjct: 1195 tcagtttccttacagccttcatgaaatcctcatggatgacataatcacgctctgcacgaa 1136

                                                                        
Query: 401  tggcagccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcgg 460
            | |||  ||| || || |||||||| ||||| || | ||| || ||||| || ||||| |
Sbjct: 1135 ttgcaaacataccggcttcagtgcaaacattccgcatatcagccccattaaatccctcag 1076

                                                 
Query: 461  caagcttaaccacagcctcgtaatcaatttcaccatg 497
            | |||||||   ||||||| |||||||||||||||||
Sbjct: 1075 cgagcttaatagcagcctcataatcaatttcaccatg 1039
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>gb|BT018476.1| Zea mays clone EL01N0423G12.d mRNA sequence
          Length = 1608

 Score =  101 bits (51), Expect = 2e-18
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                        
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 405
            |||||||| ||||||||||||||||||||||  || || || | |||||| ||||| |||
Sbjct: 1175 ttccgcacagccttcatgaagtcttcgtggactacataatctctctctgcacgaattgca 1116

                                                                        
Query: 406  gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 465
            ||||| ||||| |||||||| || || |||||||| ||||||||||| || || || || 
Sbjct: 1115 gccataccagcttcagtgcacacgttccgaagatcagcaccattgaaaccttcagctagt 1056

                                               
Query: 466  ttaaccacagcctcgtaatcaatttcaccatgctt 500
            || || || || || ||||||||||| ||||||||
Sbjct: 1055 ttcacgactgcttcataatcaatttccccatgctt 1021
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>gb|BT017713.1| Zea mays clone EL01N0446G05.c mRNA sequence
          Length = 635

 Score =  101 bits (51), Expect = 2e-18
 Identities = 129/155 (83%)
 Strand = Plus / Minus

                                                                       
Query: 346 ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 405
           |||||||| ||||||||||||||||||||||  || || || | |||||| ||||| |||
Sbjct: 220 ttccgcacagccttcatgaagtcttcgtggactacataatctctctctgcacgaattgca 161

                                                                       
Query: 406 gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagc 465
           ||||| ||||| |||||||| || || |||||||| ||||||||||| || || || || 
Sbjct: 160 gccataccagcttcagtgcacacgttccgaagatcagcaccattgaaaccttcagctagt 101

                                              
Query: 466 ttaaccacagcctcgtaatcaatttcaccatgctt 500
           || || || || || ||||||||||| ||||||||
Sbjct: 100 ttcacgactgcttcataatcaatttccccatgctt 66
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>ref|NM_123667.2| Arabidopsis thaliana RPT4A; ATPase AT5G43010 (RPT4A) mRNA, complete
            cds
          Length = 1505

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 163/201 (81%)
 Strand = Plus / Minus

                                                                        
Query: 307  tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 366
            |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 1295 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 1236

                                                                        
Query: 367  tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 426
            ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 1235 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 1176

                                                                        
Query: 427  acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 486
            |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 1175 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 1116

                                 
Query: 487  atttcaccatgcttagcgata 507
            ||||||||||| || ||||||
Sbjct: 1115 atttcaccatgtttggcgata 1095
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>gb|AY078040.1| Arabidopsis thaliana AT5g43010/MBD2_21 mRNA, complete cds
          Length = 1200

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 163/201 (81%)
 Strand = Plus / Minus

                                                                        
Query: 307  tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 366
            |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 1175 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 1116

                                                                        
Query: 367  tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 426
            ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 1115 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 1056

                                                                        
Query: 427  acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 486
            |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 1055 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 996

                                 
Query: 487  atttcaccatgcttagcgata 507
            ||||||||||| || ||||||
Sbjct: 995  atttcaccatgtttggcgata 975
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>dbj|AK220732.1| Arabidopsis thaliana mRNA for 26S proteasome AAA-ATPase subunit
           RPT4a, complete cds, clone: RAFL22-07-L12
          Length = 547

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 163/201 (81%)
 Strand = Plus / Minus

                                                                       
Query: 307 tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 366
           |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 248 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 189

                                                                       
Query: 367 tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 426
           ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 188 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 129

                                                                       
Query: 427 acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 486
           |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 128 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 69

                                
Query: 487 atttcaccatgcttagcgata 507
           ||||||||||| || ||||||
Sbjct: 68  atttcaccatgtttggcgata 48
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>gb|AF372945.1|AF372945 Arabidopsis thaliana AT5g43010/MBD2_21 mRNA, complete cds
          Length = 1508

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 163/201 (81%)
 Strand = Plus / Minus

                                                                        
Query: 307  tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 366
            |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 1295 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 1236

                                                                        
Query: 367  tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 426
            ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 1235 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 1176

                                                                        
Query: 427  acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 486
            |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 1175 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 1116

                                 
Query: 487  atttcaccatgcttagcgata 507
            ||||||||||| || ||||||
Sbjct: 1115 atttcaccatgtttggcgata 1095
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>emb|BX830758.1|CNS0A0SI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS20ZE06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1468

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 163/201 (81%)
 Strand = Plus / Minus

                                                                        
Query: 307  tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 366
            |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 1280 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 1221

                                                                        
Query: 367  tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 426
            ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 1220 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 1161

                                                                        
Query: 427  acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 486
            |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 1160 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 1101

                                 
Query: 487  atttcaccatgcttagcgata 507
            ||||||||||| || ||||||
Sbjct: 1100 atttcaccatgtttggcgata 1080
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>gb|AF123393.1|AF123393 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT4a (RPT4a)
            mRNA, complete cds
          Length = 1360

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 163/201 (81%)
 Strand = Plus / Minus

                                                                        
Query: 307  tagtgcgcgctggactcgagcttcttggcgtcattcaatttccgcaccgccttcatgaag 366
            |||||||  |||||||| || |||||||| ||| |||  || | ||||||||||||||| 
Sbjct: 1183 tagtgcgaactggactccagtttcttggcctcactcagctttctcaccgccttcatgaaa 1124

                                                                        
Query: 367  tcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcctcagtgcag 426
            ||||| ||||| || || || ||||||||||| || |||  ||| ||||| || ||||| 
Sbjct: 1123 tcttcatggatcacataatcccgctctgctcggattgcaaacattccagcttccgtgcat 1064

                                                                        
Query: 427  acattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcctcgtaatca 486
            |  || || ||||| ||||||||||| ||||| ||||| || || | |||||||||||| 
Sbjct: 1063 atgttacgcagatcagcaccattgaatccctctgcaagtttgacaatagcctcgtaatcg 1004

                                 
Query: 487  atttcaccatgcttagcgata 507
            ||||||||||| || ||||||
Sbjct: 1003 atttcaccatgtttggcgata 983
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>gb|AY109445.1| Zea mays CL337_1 mRNA sequence
          Length = 2107

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 405
            |||||||| ||||||||||||||||||||||  || || || | |||||| ||||| |||
Sbjct: 1589 ttccgcacagccttcatgaagtcttcgtggactacataatctctctctgcacgaattgca 1530

                                                           
Query: 406  gccatgccagcctcagtgcagacattgcgaagatcggcaccattgaa 452
            ||||| ||||| |||||||| || || |||||||| |||||||||||
Sbjct: 1529 gccataccagcttcagtgcacacgttccgaagatcagcaccattgaa 1483
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>gb|AY241962.1| Dermacentor variabilis 26S proteasome regulatory subunit mRNA,
            complete cds
          Length = 1322

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 125/152 (82%)
 Strand = Plus / Minus

                                                                        
Query: 349  cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagcc 408
            ||||||||||||||||||||||| |  |||||| | || || || || |||||||||  |
Sbjct: 1166 cgcaccgccttcatgaagtcttcctcaatgacgaactcccggtcggcacgaatggcaaac 1107

                                                                        
Query: 409  atgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagctta 468
            || ||||| |||||||| || ||||| ||||| ||||| |||||||| || | |||||| 
Sbjct: 1106 ataccagcttcagtgcacacgttgcgcagatctgcaccgttgaagccatctgaaagcttc 1047

                                            
Query: 469  accacagcctcgtaatcaatttcaccatgctt 500
            |||||||||||  | |||| ||| ||||||||
Sbjct: 1046 accacagcctcccagtcaacttcgccatgctt 1015
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                           
Query: 356     ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 415
               ||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || |
Sbjct: 5595972 ccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccatacccg 5596031

                                                         
Query: 416     cctcagtgcagacattgcgaagatcggcaccattgaagccct 457
               | ||||||||||| ||||||||||| || |||||||||||||
Sbjct: 5596032 cttcagtgcagacgttgcgaagatcagccccattgaagccct 5596073



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                
Query: 295     aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattca 343
               ||||| ||||||||||| |||||||| || |||||||||||||| ||||
Sbjct: 5595826 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttca 5595874
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>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0026H03
          Length = 151827

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                          
Query: 356    ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 415
              ||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || |
Sbjct: 140707 ccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccatacccg 140766

                                                        
Query: 416    cctcagtgcagacattgcgaagatcggcaccattgaagccct 457
              | ||||||||||| ||||||||||| || |||||||||||||
Sbjct: 140767 cttcagtgcagacgttgcgaagatcagccccattgaagccct 140808



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                               
Query: 295    aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattca 343
              ||||| ||||||||||| |||||||| || |||||||||||||| ||||
Sbjct: 140561 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttca 140609
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>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0419A09
          Length = 168064

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                         
Query: 356   ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 415
             ||||||||||||| || ||||  |||||||| || || || ||||| |||||||| || |
Sbjct: 23708 ccttcatgaagtcctcatggacaacgtagtcccgttcagcacgaattgcagccatacccg 23767

                                                       
Query: 416   cctcagtgcagacattgcgaagatcggcaccattgaagccct 457
             | ||||||||||| ||||||||||| || |||||||||||||
Sbjct: 23768 cttcagtgcagacgttgcgaagatcagccccattgaagccct 23809



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 295   aagtcggcactgtagtgcgcgctggactcgagcttcttggcgtcattca 343
             ||||| ||||||||||| |||||||| || |||||||||||||| ||||
Sbjct: 23562 aagtctgcactgtagtgggcgctggattccagcttcttggcgtcgttca 23610
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>dbj|AB120534.1| Nicotiana tabacum mRNA, transcriptionally up-regulated region
           associated with genomic hypomethylation, clone: O17
          Length = 1085

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 90/107 (84%)
 Strand = Plus / Plus

                                                                       
Query: 391 tctgctcgaatggcagccatgccagcctcagtgcagacattgcgaagatcggcaccattg 450
           ||||| ||||| || | ||||||||||||||| || ||||| || || || || ||||||
Sbjct: 281 tctgcacgaatagctgacatgccagcctcagtacatacattacggaggtcagctccattg 340

                                                          
Query: 451 aagccctcggcaagcttaaccacagcctcgtaatcaatttcaccatg 497
           |||||||| || |||||||| ||||| || |||||||| ||||||||
Sbjct: 341 aagccctctgcgagcttaacgacagcttcataatcaatctcaccatg 387
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>ref|NM_103580.3| Arabidopsis thaliana ATP binding / ATPase/ hydrolase/
            nucleoside-triphosphatase/ nucleotide binding AT1G45000
            mRNA, complete cds
          Length = 1555

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 355  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 414
            ||||||||||||||||| || || || ||||||||||||||||  || ||   ||| |||
Sbjct: 1203 gccttcatgaagtcttcatgtattacatagtcacgctctgctctgattgcgaacattcca 1144

                                                                        
Query: 415  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 474
            || |||||||| |  || || ||||||||||||||||| |||||  |||| || || | |
Sbjct: 1143 gcttcagtgcatatgttacgcagatcggcaccattgaaaccctctccaagtttcacgata 1084

                                      
Query: 475  gcctcgtaatcaatttcaccatgctt 500
            ||||| || || ||||| ||||||||
Sbjct: 1083 gcctcatagtctatttctccatgctt 1058
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>gb|AY114673.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT4a-like
            protein (At1g45000) mRNA, complete cds
          Length = 1254

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 355  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 414
            ||||||||||||||||| || || || ||||||||||||||||  || ||   ||| |||
Sbjct: 1127 gccttcatgaagtcttcatgtattacatagtcacgctctgctctgattgcgaacattcca 1068

                                                                        
Query: 415  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 474
            || |||||||| |  || || ||||||||||||||||| |||||  |||| || || | |
Sbjct: 1067 gcttcagtgcatatgttacgcagatcggcaccattgaaaccctctccaagtttcacgata 1008

                                      
Query: 475  gcctcgtaatcaatttcaccatgctt 500
            ||||| || || ||||| ||||||||
Sbjct: 1007 gcctcatagtctatttctccatgctt 982
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>gb|AY062709.1| Arabidopsis thaliana similar to 26S proteasome AAA-ATPase subunit
            RPT4a (At1g45000; F27F5.8) mRNA, complete cds
          Length = 1465

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 118/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 355  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 414
            ||||||||||||||||| || || || ||||||||||||||||  || ||   ||| |||
Sbjct: 1203 gccttcatgaagtcttcatgtattacatagtcacgctctgctctgattgcgaacattcca 1144

                                                                        
Query: 415  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 474
            || |||||||| |  || || ||||||||||||||||| |||||  |||| || || | |
Sbjct: 1143 gcttcagtgcatatgttacgcagatcggcaccattgaaaccctctccaagtttcacgata 1084

                                      
Query: 475  gcctcgtaatcaatttcaccatgctt 500
            ||||| || || ||||| ||||||||
Sbjct: 1083 gcctcatagtctatttctccatgctt 1058
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>ref|NM_132080.2| Drosophila melanogaster Rpt4 CG3455-RA (Rpt4), mRNA
          Length = 1465

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Minus

                                                                        
Query: 349  cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagcc 408
            |||||||||||||||||||| || ||||||||||| || ||||| || |||||||||   
Sbjct: 1259 cgcaccgccttcatgaagtcctcctggatgacgtactcccgctccgcacgaatggcaaag 1200

                                                     
Query: 409  atgccagcctcagtgcagacattgcgaagatcggcaccatt 449
            |  || ||||| ||||||||||| || ||||| || |||||
Sbjct: 1199 agacccgcctccgtgcagacattacgcagatcagcgccatt 1159
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>gb|AF145310.1|AF145310 Drosophila melanogaster 26S proteasome regulatory complex subunit
            p42D mRNA, complete cds
          Length = 1173

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 51/57 (89%)
 Strand = Plus / Minus

                                                                     
Query: 349  cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggca 405
            |||||||||||||||||||| || ||||||||||| || ||||| || |||||||||
Sbjct: 1118 cgcaccgccttcatgaagtcctcctggatgacgtactcccgctccgcacgaatggca 1062
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>ref|XM_812559.1| Trypanosoma cruzi strain CL Brener 26S protease regulatory subunit
            (Tc00.1047053510311.70) partial mRNA
          Length = 1197

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                       
Query: 412  ccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaac 470
            |||||||||||||| ||||| || | ||||||||||||||| ||||| | |||||||||
Sbjct: 1076 ccagcctcagtgcacacattccgtaaatcggcaccattgaatccctccgaaagcttaac 1018
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>gb|AY348234.1| Drosophila crucigera RPT4 (Rpt4) gene, partial cds
          Length = 483

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 355 gccttcatgaagtcttcgtggatgacgtagtcacgctc 392
           ||||||||||||||||| ||||||||||| ||||||||
Sbjct: 475 gccttcatgaagtcttcytggatgacgtattcacgctc 438



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 415 gcctcagtgcagacattgcgaagatcggcaccattgaa 452
           ||||| ||||| | ||||||||||||||| ||||||||
Sbjct: 415 gcctcggtgcaaatattgcgaagatcggcgccattgaa 378
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>emb|BX815467.1|CNS0ABDM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS62ZE04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1297

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 117/146 (80%)
 Strand = Plus / Minus

                                                                        
Query: 355  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 414
            ||||||||||||||||| || || || ||||||||||||||||  || ||   ||| |||
Sbjct: 1123 gccttcatgaagtcttcatgtattacatagtcacgctctgctctgattgcgaacattcca 1064

                                                                        
Query: 415  gcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccaca 474
            || |||||||| |  || || ||||||||||||||||  |||||  |||| || || | |
Sbjct: 1063 gcttcagtgcatatgttacgcagatcggcaccattgagaccctctccaagtttcacgata 1004

                                      
Query: 475  gcctcgtaatcaatttcaccatgctt 500
            ||||| || || ||||| ||||||||
Sbjct: 1003 gcctcatagtctatttctccatgctt 978
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>gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana BAC F27F5 from chromosome I,
             complete sequence
          Length = 137336

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 84/102 (82%)
 Strand = Plus / Minus

                                                                         
Query: 356   ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 415
             |||||||||||||||| || || || ||||||||||||||||  || ||   ||| ||||
Sbjct: 37409 ccttcatgaagtcttcatgtattacatagtcacgctctgctctgattgcgaacattccag 37350

                                                       
Query: 416   cctcagtgcagacattgcgaagatcggcaccattgaagccct 457
             | |||||||| |  || || ||||||||||||||||| ||||
Sbjct: 37349 cttcagtgcatatgttacgcagatcggcaccattgaaaccct 37308
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>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence
          Length = 97982

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                         
Query: 385   tcacgctctgctcgaatggcagccatgccagcctcagtgcagacattgcgaagatcggca 444
             ||||| ||||| |||||||||| ||| ||||| |||||||| |  || |||||||| |||
Sbjct: 87267 tcacgttctgcacgaatggcagacattccagcttcagtgcaaatgttacgaagatcagca 87326

                          
Query: 445   ccattgaagccct 457
             |||||||| ||||
Sbjct: 87327 ccattgaacccct 87339



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 455   cctcggcaagcttaaccacagcctcgtaatcaatttcaccatgctt 500
             |||||||||| ||||| || || || || |||||||||||||||||
Sbjct: 87451 cctcggcaagtttaacaaccgcttcatagtcaatttcaccatgctt 87496
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>gb|AY071182.1| Drosophila melanogaster RE23388 full length cDNA
          Length = 1479

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 83/101 (82%)
 Strand = Plus / Minus

                                                                        
Query: 349  cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagcc 408
            ||||||||||||||||||||  | ||||||||||| || ||||| || |||||||||   
Sbjct: 1259 cgcaccgccttcatgaagtccccctggatgacgtactcccgctccgcacgaatggcaaag 1200

                                                     
Query: 409  atgccagcctcagtgcagacattgcgaagatcggcaccatt 449
            |  || ||||| ||||||||||| || ||||| || |||||
Sbjct: 1199 agacccgcctccgtgcagacattacgcagatcagcgccatt 1159
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>ref|XM_808730.1| Trypanosoma cruzi strain CL Brener 26S protease regulatory subunit
            (Tc00.1047053510265.20) partial mRNA
          Length = 1197

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                    
Query: 412  ccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagctt 467
            |||||||||||||| ||||| || | ||||||||||||||| ||||| | ||||||
Sbjct: 1076 ccagcctcagtgcacacattccgtaaatcggcaccattgaatccctccgaaagctt 1021
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>gb|AC113619.5| Drosophila melanogaster X BAC RP98-22D21 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 160001

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 349   cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctc 392
             |||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 20756 cgcaccgccttcatgaagtcctcctggatgacgtactcccgctc 20713
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>gb|AC023710.5| Drosophila melanogaster X BAC RP98-19D3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 189976

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 349   cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctc 392
             |||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 65477 cgcaccgccttcatgaagtcctcctggatgacgtactcccgctc 65520
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>gb|AE003437.3| Drosophila melanogaster chromosome X, section 21 of 74 of the complete
             sequence
          Length = 305376

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 349   cgcaccgccttcatgaagtcttcgtggatgacgtagtcacgctc 392
             |||||||||||||||||||| || ||||||||||| || |||||
Sbjct: 55336 cgcaccgccttcatgaagtcctcctggatgacgtactcccgctc 55379
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>gb|AY348236.1| Drosophila bipolita RPT4 (Rpt4) gene, partial cds
          Length = 458

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 357 cttcatgaagtcttcgtggatgacgtagtcacgctc 392
           ||||||||||||||| |||||||| || ||||||||
Sbjct: 456 cttcatgaagtcttcytggatgacatattcacgctc 421
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>gb|AY348235.1| Drosophila canipolita RPT4 (Rpt4) gene, partial cds
          Length = 466

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 357 cttcatgaagtcttcgtggatgacgtagtcacgctc 392
           ||||||||||||||| |||||||| || ||||||||
Sbjct: 463 cttcatgaagtcttcttggatgacatattcacgctc 428
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>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence
          Length = 384518

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 408    catgccagcctcagtgcagacattgcgaagatcggcaccattgaagccctc 458
              |||||| ||||| ||||| || ||||| ||||| ||||| |||||||||||
Sbjct: 203040 catgccggcctccgtgcacacgttgcgcagatcagcaccgttgaagccctc 202990
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>ref|XM_962695.1| PREDICTED: Tribolium castaneum similar to CG3455-PA (LOC656146), mRNA
          Length = 1300

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 59/71 (83%)
 Strand = Plus / Minus

                                                                        
Query: 355  gccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgcca 414
            |||||||| |||||||| ||||| ||||| || || || | ||||||||||  ||  |||
Sbjct: 1199 gccttcataaagtcttcttggattacgtattcccgttcagatcgaatggcaaacaaacca 1140

                       
Query: 415  gcctcagtgca 425
            |||||||||||
Sbjct: 1139 gcctcagtgca 1129
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>emb|CR931792.9| Zebrafish DNA sequence from clone DKEY-180L1 in linkage group 13,
             complete sequence
          Length = 163673

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 67    aaacaaacaatgtaaatctaac 88
             ||||||||||||||||||||||
Sbjct: 82936 aaacaaacaatgtaaatctaac 82957
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>emb|CR731783.2|CNS0GRL8 Tetraodon nigroviridis full-length cDNA
          Length = 1227

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1070 ttccgcacagccttcatgaagtcctcctgggtgacgta 1033
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>emb|CR731667.2|CNS0GRI0 Tetraodon nigroviridis full-length cDNA
          Length = 1236

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1079 ttccgcacagccttcatgaagtcctcctgggtgacgta 1042
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>emb|CR728890.2|CNS0GPCW Tetraodon nigroviridis full-length cDNA
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1140 ttccgcacagccttcatgaagtcctcctgggtgacgta 1103
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>emb|CR727745.2|CNS0GOH3 Tetraodon nigroviridis full-length cDNA
          Length = 1086

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 346 ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 936 ttccgcacagccttcatgaagtcctcctgggtgacgta 899
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>emb|CR727398.2|CNS0GO7G Tetraodon nigroviridis full-length cDNA
          Length = 1226

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1086 ttccgcacagccttcatgaagtcctcctgggtgacgta 1049
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>emb|CR685292.1|CNS0FRQ0 Tetraodon nigroviridis full-length cDNA
          Length = 1274

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1127 ttccgcacagccttcatgaagtcctcctgggtgacgta 1090
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>emb|CR679775.2|CNS0FNGR Tetraodon nigroviridis full-length cDNA
          Length = 1291

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1141 ttccgcacagccttcatgaagtcctcctgggtgacgta 1104
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>emb|CR679558.2|CNS0FNAQ Tetraodon nigroviridis full-length cDNA
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1146 ttccgcacagccttcatgaagtcctcctgggtgacgta 1109
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>emb|CR676800.2|CNS0FL6K Tetraodon nigroviridis full-length cDNA
          Length = 1295

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1146 ttccgcacagccttcatgaagtcctcctgggtgacgta 1109
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>emb|CR675817.2|CNS0FKFJ Tetraodon nigroviridis full-length cDNA
          Length = 1285

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1136 ttccgcacagccttcatgaagtcctcctgggtgacgta 1099
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>emb|CR675913.1|CNS0FKI7 Tetraodon nigroviridis full-length cDNA
          Length = 1282

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1157 ttccgcacagccttcatgaagtcctcctgggtgacgta 1120
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>emb|CR675385.2|CNS0FK3J Tetraodon nigroviridis full-length cDNA
          Length = 1296

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1145 ttccgcacagccttcatgaagtcctcctgggtgacgta 1108
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>emb|CR674301.2|CNS0FJ9F Tetraodon nigroviridis full-length cDNA
          Length = 951

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 346 ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 818 ttccgcacagccttcatgaagtcctcctgggtgacgta 781
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>emb|CR672027.2|CNS0FHI9 Tetraodon nigroviridis full-length cDNA
          Length = 1282

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1134 ttccgcacagccttcatgaagtcctcctgggtgacgta 1097
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>emb|CR671714.2|CNS0FH9K Tetraodon nigroviridis full-length cDNA
          Length = 1255

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1119 ttccgcacagccttcatgaagtcctcctgggtgacgta 1082
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>emb|CR670430.2|CNS0FG9W Tetraodon nigroviridis full-length cDNA
          Length = 1295

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1145 ttccgcacagccttcatgaagtcctcctgggtgacgta 1108
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>emb|CR667294.2|CNS0FDUS Tetraodon nigroviridis full-length cDNA
          Length = 1283

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1135 ttccgcacagccttcatgaagtcctcctgggtgacgta 1098
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>emb|CR666785.2|CNS0FDGN Tetraodon nigroviridis full-length cDNA
          Length = 1282

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1134 ttccgcacagccttcatgaagtcctcctgggtgacgta 1097
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>emb|CR666640.2|CNS0FDCM Tetraodon nigroviridis full-length cDNA
          Length = 1107

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 346 ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 956 ttccgcacagccttcatgaagtcctcctgggtgacgta 919
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>emb|CR664610.2|CNS0FBS8 Tetraodon nigroviridis full-length cDNA
          Length = 1325

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1177 ttccgcacagccttcatgaagtcctcctgggtgacgta 1140
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>emb|CR665620.2|CNS0FCKA Tetraodon nigroviridis full-length cDNA
          Length = 1102

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 346 ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 955 ttccgcacagccttcatgaagtcctcctgggtgacgta 918
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>emb|CR665248.2|CNS0FC9Y Tetraodon nigroviridis full-length cDNA
          Length = 1282

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1134 ttccgcacagccttcatgaagtcctcctgggtgacgta 1097
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>emb|CR660805.2|CNS0F8UJ Tetraodon nigroviridis full-length cDNA
          Length = 1287

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 346  ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
            |||||||| |||||||||||||| || ||| |||||||
Sbjct: 1136 ttccgcacagccttcatgaagtcctcctgggtgacgta 1099
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>emb|CR659548.2|CNS0F7VM Tetraodon nigroviridis full-length cDNA
          Length = 559

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 346 ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 404 ttccgcacagccttcatgaagtcctcctgggtgacgta 367
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>emb|CR658573.2|CNS0F74J Tetraodon nigroviridis full-length cDNA
          Length = 680

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 346 ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 523 ttccgcacagccttcatgaagtcctcctgggtgacgta 486
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>emb|CR657800.2|CNS0F6J2 Tetraodon nigroviridis full-length cDNA
          Length = 936

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 346 ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 779 ttccgcacagccttcatgaagtcctcctgggtgacgta 742
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>emb|CR657024.2|CNS0F5XI Tetraodon nigroviridis full-length cDNA
          Length = 1104

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 346 ttccgcaccgccttcatgaagtcttcgtggatgacgta 383
           |||||||| |||||||||||||| || ||| |||||||
Sbjct: 956 ttccgcacagccttcatgaagtcctcctgggtgacgta 919
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>dbj|AB008264.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBD2
          Length = 79976

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 474   agcctcgtaatcaatttcaccatgcttagcgata 507
             |||||||||||| ||||||||||| || ||||||
Sbjct: 77848 agcctcgtaatcgatttcaccatgtttggcgata 77881



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 82/102 (80%)
 Strand = Plus / Plus

                                                                         
Query: 356   ccttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccag 415
             |||||||||| ||||| ||||| || || || ||||||||||| || |||  ||| ||||
Sbjct: 77643 ccttcatgaaatcttcatggatcacataatcccgctctgctcggattgcaaacattccag 77702

                                                       
Query: 416   cctcagtgcagacattgcgaagatcggcaccattgaagccct 457
             | || ||||| |  || || ||||| ||||||||||| ||||
Sbjct: 77703 cttccgtgcatatgttacgcagatcagcaccattgaatccct 77744
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>gb|AC140468.2| Mus musculus BAC clone RP24-394C15 from chromosome 3, complete sequence
          Length = 168853

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    gtaacttcatctcaaaaaag 50
             ||||||||||||||||||||
Sbjct: 71071 gtaacttcatctcaaaaaag 71090
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>gb|BC073644.1| Xenopus laevis similar to proteasome 26S ATPase subunit 6, mRNA (cDNA
            clone IMAGE:5515801), partial cds
          Length = 1552

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 110/140 (78%)
 Strand = Plus / Minus

                                                                        
Query: 358  ttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcc 417
            |||||||||||||| ||||  ||  ||||| | |||||||| || |||  ||| || || 
Sbjct: 1116 ttcatgaagtcttcctggacaacaaagtcatggtctgctcggattgcaaacatccccgct 1057

                                                                        
Query: 418  tcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcc 477
            || ||||||||||| | ||| ||||| ||||| || || || | |||||| || |  || 
Sbjct: 1056 tctgtgcagacattcctaaggtcggctccattaaaaccatctgaaagctttactatggct 997

                                
Query: 478  tcgtaatcaatttcaccatg 497
            || |||||||||||||||||
Sbjct: 996  tcataatcaatttcaccatg 977
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 318     ggactcgagcttcttggcgt 337
               ||||||||||||||||||||
Sbjct: 1559415 ggactcgagcttcttggcgt 1559434
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>gb|AC161600.6| Mus musculus BAC clone RP23-350K3 from chromosome 3, complete sequence
          Length = 218929

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    gtaacttcatctcaaaaaag 50
             ||||||||||||||||||||
Sbjct: 22127 gtaacttcatctcaaaaaag 22146
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>gb|BC045087.1| Xenopus laevis similar to proteasome 26S ATPase subunit 6, mRNA (cDNA
            clone IMAGE:5542937), partial cds
          Length = 1585

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 110/140 (78%)
 Strand = Plus / Minus

                                                                        
Query: 358  ttcatgaagtcttcgtggatgacgtagtcacgctctgctcgaatggcagccatgccagcc 417
            |||||||||||||| ||||  ||  ||||| | |||||||| || |||  ||| || || 
Sbjct: 1149 ttcatgaagtcttcctggacaacaaagtcatggtctgctcggattgcaaacatccccgct 1090

                                                                        
Query: 418  tcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaaccacagcc 477
            || ||||||||||| | ||| ||||| ||||| || || || | |||||| || |  || 
Sbjct: 1089 tctgtgcagacattcctaaggtcggctccattaaaaccatctgaaagctttactatggct 1030

                                
Query: 478  tcgtaatcaatttcaccatg 497
            || |||||||||||||||||
Sbjct: 1029 tcataatcaatttcaccatg 1010
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>emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chromosome X Contains a
             novel gene, the 5' end of the PLAC1 gene for
             placenta-specific 1, a ribosomal protein L21 (RPL21)
             pseudogene, a ribosomal protein S7 (RPS7) pseudogene and
             the 3' end of the LOC169090 gene, complete sequence
          Length = 209317

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   caaactccaccatggtacaa 239
             ||||||||||||||||||||
Sbjct: 37055 caaactccaccatggtacaa 37074
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>ref|XM_502698.1| Yarrowia lipolytica CLIB122, YALI0D11418g predicted mRNA
          Length = 1311

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 394  gctcgaatggcagccatgccagcctcagtgca 425
            ||||||||||||  |||||| |||||||||||
Sbjct: 1205 gctcgaatggcaaacatgccggcctcagtgca 1174
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>emb|AL355589.8| Human DNA sequence from clone RP11-168F17 on chromosome 9 Contains a CpG
              island, complete sequence
          Length = 143499

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    tagtcatcccacaacatata 174
              ||||||||||||||||||||
Sbjct: 120557 tagtcatcccacaacatata 120576
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>emb|BX548246.17| Zebrafish DNA sequence from clone CH211-274P15 in linkage group 14,
              complete sequence
          Length = 155919

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    gtagtcatcccacaacatat 173
              ||||||||||||||||||||
Sbjct: 105976 gtagtcatcccacaacatat 105995
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>ref|NM_200862.1| Danio rerio zgc:77855 (zgc:77855), mRNA
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 355 gccttcatgaagtcttcgtggatg 378
           ||||||||||||||||| ||||||
Sbjct: 736 gccttcatgaagtcttcctggatg 759
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>dbj|AK163154.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730041F15 product:ash1 (absent,
            small, or homeotic)-like (Drosophila), full insert
            sequence
          Length = 3770

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 31   gtaacttcatctcaaaaaag 50
            ||||||||||||||||||||
Sbjct: 3717 gtaacttcatctcaaaaaag 3736
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>gb|AY208828.1| Rhipicephalus appendiculatus proteasome-like protein mRNA, complete
            cds
          Length = 1366

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                        
Query: 412  ccagcctcagtgcagacattgcgaagatcggcaccattgaagccctcggcaagcttaacc 471
            ||||| |||||||| || ||||||||||| || || ||||| || || | |||||| |||
Sbjct: 1148 ccagcttcagtgcacacgttgcgaagatctgcgccgttgaatccgtccgaaagcttcacc 1089

                    
Query: 472  acagcctc 479
            || |||||
Sbjct: 1088 acggcctc 1081
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>emb|BX682545.5| Mouse DNA sequence from clone RP23-311B24 on chromosome 4, complete
             sequence
          Length = 217751

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   tacaagaaaacagacagtgc 254
             ||||||||||||||||||||
Sbjct: 25103 tacaagaaaacagacagtgc 25084
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>gb|BC062862.1| Danio rerio zgc:77855, mRNA (cDNA clone MGC:77855 IMAGE:7002341),
           complete cds
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 355 gccttcatgaagtcttcgtggatg 378
           ||||||||||||||||| ||||||
Sbjct: 736 gccttcatgaagtcttcctggatg 759
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>emb|BX927255.9| Zebrafish DNA sequence from clone CH211-266I18 in linkage group 20,
              complete sequence
          Length = 155519

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 355    gccttcatgaagtcttcgtggatg 378
              ||||||||||||||||| ||||||
Sbjct: 113126 gccttcatgaagtcttcctggatg 113103
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>emb|BX537272.5| Zebrafish DNA sequence from clone DKEY-25E12 in linkage group 20,
              complete sequence
          Length = 210184

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 355    gccttcatgaagtcttcgtggatg 378
              ||||||||||||||||| ||||||
Sbjct: 138473 gccttcatgaagtcttcctggatg 138450
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>gb|AC006952.6|AC006952 Homo sapiens chromosome 9, clone hRPK.374_B_16, complete sequence
          Length = 219345

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   tagtcatcccacaacatata 174
             ||||||||||||||||||||
Sbjct: 30320 tagtcatcccacaacatata 30339
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>gb|AE015925.1| Chlamydophila caviae GPIC, complete genome
          Length = 1173390

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 422    tgcagacattgcgaagatcg 441
              ||||||||||||||||||||
Sbjct: 795894 tgcagacattgcgaagatcg 795875
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 394     gctcgaatggcagccatgccagcctcagtgca 425
               ||||||||||||  |||||| |||||||||||
Sbjct: 1428485 gctcgaatggcaaacatgccggcctcagtgca 1428516
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>emb|AL049849.1|HSB1L1C6 Homo sapiens chromosome 21 BAC B1L1C6, complete sequence
          Length = 41185

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    aaacaaacaatgtaaatcta 86
             ||||||||||||||||||||
Sbjct: 20970 aaacaaacaatgtaaatcta 20989
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>emb|AL671995.4| Mouse DNA sequence from clone RP23-109E24 on chromosome X, complete
              sequence
          Length = 155349

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 34     acttcatctcaaaaaaggca 53
              ||||||||||||||||||||
Sbjct: 114536 acttcatctcaaaaaaggca 114517


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,290,154
Number of Sequences: 3902068
Number of extensions: 4290154
Number of successful extensions: 78206
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 77950
Number of HSP's gapped (non-prelim): 249
length of query: 507
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 485
effective length of database: 17,147,199,772
effective search space: 8316391889420
effective search space used: 8316391889420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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