>XTH29_ARATH (Q8L7H3) Probable xyloglucan endotransglucosylase/hydrolase protein|
           29 precursor (EC 2.4.1.207) (At-XTH29) (XTH-29)
          Length = 357

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
 Frame = -3

Query: 454 AEFSDLVLSGCGAGNVADPEG------------CQVD---LLTHDVAVMAPAKRAAMRGF 320
           +EF D+ L GC   +    E             C V    L+++D + ++P +  AMR F
Sbjct: 230 SEFKDIALDGCNVSDSFPGENNNNNIGNYNNINCSVSDQFLMSNDYSTISPKQATAMRRF 289

Query: 319 REQHLTYTACRDRVRYKTTVFPEC 248
           RE+++ Y+ C D +RY     PEC
Sbjct: 290 RERYMYYSYCYDTIRYSVPP-PEC 312

>XTH28_ARATH (Q38909) Probable xyloglucan endotransglucosylase/hydrolase protein|
           28 precursor (EC 2.4.1.207) (At-XTH28) (XTH-28)
          Length = 332

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = -3

Query: 454 AEFSDLVLSGCGAGNVADPEGCQVDLLTHD--VAVMAPAKRAAMRGFREQHLTYTACRDR 281
           ++F+DL+L GC          C+ + + +    + +  ++R  M  FR++H+TY+ C D 
Sbjct: 221 SQFTDLILHGCAVDPTEKFPSCKDEAVQNLRLASEITESQRNKMEIFRQKHMTYSYCYDH 280

Query: 280 VRYKTTVFPEC 248
           +RYK  V  EC
Sbjct: 281 MRYK-VVLSEC 290

>XTH30_ARATH (Q38908) Probable xyloglucan endotransglucosylase/hydrolase protein|
           30 precursor (EC 2.4.1.207) (At-XTH30) (XTH-30)
          Length = 343

 Score = 42.0 bits (97), Expect = 7e-04
 Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
 Frame = -3

Query: 454 AEFSDLVLSGCGAGNVAD-PEGCQ--VDLL-THDVAVMAPAKRAAMRGFREQHLTYTACR 287
           AEF    L GC    + + P  C   VD L + D + +   +RAAMR FR++ + Y+ C 
Sbjct: 222 AEFKSFSLDGCSVDPIQEVPMDCSDSVDFLESQDYSSINSHQRAAMRRFRQRFMYYSYCY 281

Query: 286 DRVRYKTTVFPEC 248
           D +RY   + PEC
Sbjct: 282 DTLRYPEPL-PEC 293

>XTH27_ARATH (Q8LDS2) Probable xyloglucan endotransglucosylase/hydrolase protein|
           27 precursor (EC 2.4.1.207) (At-XTH27) (XTH-27)
          Length = 333

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = -3

Query: 454 AEFSDLVLSGCGAGNVAD----PEGCQVDLLTHDVAVMAPAKRAAMRGFREQHLTYTACR 287
           A FSDLVL GC    +       EG   D+       + P++R+ M  FR + +TY+ C 
Sbjct: 221 ARFSDLVLHGCPVDPIEQFPRCDEGAAEDMRA--AQEITPSQRSKMDVFRRRLMTYSYCY 278

Query: 286 DRVRYKTTVFPEC 248
           DR RY   +  EC
Sbjct: 279 DRARYNVAL-SEC 290

>Y2910_MYCBO (P65046) Hypothetical protein Mb2910c|
          Length = 295

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = +2

Query: 281 PVAARRVG*VLLAE-----PSHGGALGRCHDCDVVREQVDLAPLGVGDVARAAAAQDEVG 445
           PV ARRVG V+L +     P   G    C       ++VDL    VG  A A A Q  VG
Sbjct: 127 PVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVG 186

Query: 446 KL 451
           K+
Sbjct: 187 KV 188

>Y2886_MYCTU (P65045) Hypothetical protein Rv2886c/MT2954|
          Length = 295

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
 Frame = +2

Query: 281 PVAARRVG*VLLAE-----PSHGGALGRCHDCDVVREQVDLAPLGVGDVARAAAAQDEVG 445
           PV ARRVG V+L +     P   G    C       ++VDL    VG  A A A Q  VG
Sbjct: 127 PVPARRVGRVILVDEPAGQPGRWGRTAVCARLSSADQKVDLDRQVVGVTAWATAEQIPVG 186

Query: 446 KL 451
           K+
Sbjct: 187 KV 188

>ATM_NEUCR (Q7RZT9) Serine/threonine-protein kinase tel-1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase tel-1) (Telomere length
           regulation protein 1) (ATM homolog)
          Length = 2953

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +3

Query: 99  AMHRSTRLIRSETITYCML-EEYCSGEDDRRRLFLDSPQRWKLESPSARSSHSGKTVVL 272
           A  R+ +  R   + Y +L E+    ED  +    D P+R ++ +  + SSHS K ++L
Sbjct: 671 AQFRAVQKQRHAMLRYLLLLEDEAPPEDSHKATSTDQPKREEIRAADSSSSHSAKRLIL 729

>TLK1_MOUSE (Q8C0V0) Serine/threonine-protein kinase tousled-like 1 (EC|
           2.7.11.1) (Tousled-like kinase 1)
          Length = 766

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 30  SCVLYCVHFR*MNEPRSTKLLDHAMHRSTRLIRSETITYCMLEEYCSGED 179
           +C  Y +H + ++ PR  KL D+           +T T+C + EYC G D
Sbjct: 505 ACREYRIH-KELDHPRIVKLYDY--------FSLDTDTFCTVLEYCEGND 545

>TLK1_HUMAN (Q9UKI8) Serine/threonine-protein kinase tousled-like 1 (EC|
           2.7.11.1) (Tousled-like kinase 1) (PKU-beta)
          Length = 766

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 30  SCVLYCVHFR*MNEPRSTKLLDHAMHRSTRLIRSETITYCMLEEYCSGED 179
           +C  Y +H + ++ PR  KL D+           +T T+C + EYC G D
Sbjct: 505 ACREYRIH-KELDHPRIVKLYDY--------FSLDTDTFCTVLEYCEGND 545

>KCNA4_RAT (P15385) Potassium voltage-gated channel subfamily A member 4|
           (Voltage-gated potassium channel subunit Kv1.4) (RCK4)
           (RHK1) (RK3)
          Length = 655

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 328 RGFREQHLTYTACRDRVRYKTTVFPECDDLADGDS 224
           RG RE+  T T  + ++ ++ + FP C DL    S
Sbjct: 80  RGSREEEATRTEKKKKLHHRQSSFPHCSDLMPSGS 114

>BEDC2_PSEPU (Q07945) Benzene 1,2-dioxygenase beta subunit (EC 1.14.12.3)|
          Length = 187

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = +3

Query: 108 RSTRLIRSETITYCMLEEYCSGEDDR-----RRLFLDSPQRWKLESPSARSSHSGKTVVL 272
           R+TR++R   + Y  L +Y   +DD      R   + S   W  E+P++R+ H    V++
Sbjct: 60  RTTRIMRDSRLEYSGLRDYAHFDDDATMMKGRLRKITSDVSWS-ENPASRTRHIVSNVMI 118

Query: 273 YRT 281
             T
Sbjct: 119 IPT 121

>YIJF_ECOLI (P32668) Hypothetical protein yijF precursor|
          Length = 205

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 177 DDRRRLFLDSPQRWKLESPSARSSHSGKTVVLYRTLSRHAV*VRCCSRNP 326
           +D  + F + PQ+WKL+ P +   H  +   L    SRH    R  S+NP
Sbjct: 95  EDMAKNFAEYPQKWKLKRPDSNIDHR-RVPNLETWFSRHDK-TRPTSKNP 142

>XTH19_ARATH (Q9M0D1) Probable xyloglucan endotransglucosylase/hydrolase protein|
           19 precursor (EC 2.4.1.207) (At-XTH19) (XTH-19)
          Length = 277

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 331 MRGFREQHLTYTACRDRVRYKTTVFPEC 248
           M+G + +++ Y  C D+ R+   V PEC
Sbjct: 249 MKGVQSKYMVYNYCSDKKRFPRGVPPEC 276

>CWC27_ASPFU (Q4WE62) Peptidyl-prolyl isomerase cwc27 (EC 5.2.1.8)|
          Length = 559

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 20/80 (25%), Positives = 37/80 (46%)
 Frame = +3

Query: 168 SGEDDRRRLFLDSPQRWKLESPSARSSHSGKTVVLYRTLSRHAV*VRCCSRNPLMAARLA 347
           + ED+  R+F  +  + KLES  A+S   GKT +     +++    +  +      A+L 
Sbjct: 396 AAEDETLRMF--NAFKAKLESADAKSGPHGKTSISASDTTKYTSQAKSNTEPEDEEAQLC 453

Query: 348 GAMTATSCVSRSTWHPSGSA 407
                 +C S  +W  +G+A
Sbjct: 454 DLHFIANCQSCKSWDDTGTA 473


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,208,804
Number of Sequences: 219361
Number of extensions: 913065
Number of successful extensions: 2873
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2871
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)