ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart19b04 |
|---|---|
| Clone Library Name | barley_pub |
>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 663 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKK-CSDKFIATDKVCLMCNKPCKERNLVNL 238 C C N NT A+ TCGHVFC C ++ A + C CNKP +L+++ Sbjct: 611 CSLCSKNWKNT----ALKTCGHVFCDVCCKERLAARMRKCPTCNKPFSSNDLLSI 661
>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 693 Score = 43.5 bits (101), Expect = 3e-04 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Frame = -2 Query: 450 EENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKK-CSDKFIATDKVCLMC 274 +E++ + ++ C C N N +AI TCGHVFC+ C ++ A + C C Sbjct: 624 DEDSMAEELENFRTLVYCSLCSKNWKN----MAIRTCGHVFCEDCCKERLAARMRKCPTC 679 Query: 273 NKPCKERNLV 244 NKP +L+ Sbjct: 680 NKPFSSNDLL 689
>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)| Length = 707 Score = 42.7 bits (99), Expect = 6e-04 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 8/83 (9%) Frame = -2 Query: 492 EKLKLKSLFPISFTEENARQK--SNKSVEKSYI-----CPSCKSNLTNTMSLVAISTCGH 334 EKLK++ L +S + + K SN + E+ + C C+SN NT+ + CGH Sbjct: 618 EKLKVR-LDKVSSERDKWKTKCQSNSTEEEEMLRNLVLCSVCRSNFKNTI----LKGCGH 672 Query: 333 VFCKKCSDKFIATD-KVCLMCNK 268 VFC +C D +A + C CNK Sbjct: 673 VFCNECVDNRLANRMRKCPSCNK 695
>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein| Length = 229 Score = 42.7 bits (99), Expect = 6e-04 Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKV-----CLMCNKPCK 259 K ++ +CP C+ +L +S + CGH+FC+ C + + C +C KPC Sbjct: 6 KDNQEEGVCPICQESLKEAVS----TNCGHLFCRVCLTQHVEKASASGVFCCPLCRKPCS 61 Query: 258 ERNLVNLEKGGTGF 217 E L GTG+ Sbjct: 62 EEVL------GTGY 69
>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 700 Score = 42.4 bits (98), Expect = 7e-04 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = -2 Query: 402 ICPSCKSNLTNTMSLVAISTCGHVFCKKCS-DKFIATDKVCLMCNKPCKERNLVNL 238 +C C N +T A+ CGHVFC +C+ D+ A + C CNKP + +L+ + Sbjct: 647 MCSLCSKNWKDT----ALKVCGHVFCHQCAQDRLDARLRKCPNCNKPFSQNDLLTV 698
>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin| A-sensitivity protein 1) Length = 700 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKK-CSDKFIATDKVCLMCNKPCKERNLVNL 238 C C N N +AI TCGHVFC+ C ++ A + C CNK +L+ + Sbjct: 648 CSLCSKNWKN----MAIKTCGHVFCENCCKERLAARMRKCPTCNKAFSSNDLLTV 698
>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 681 Score = 40.4 bits (93), Expect = 0.003 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%) Frame = -2 Query: 450 EENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCS-DKFIATDKVCLMC 274 E+ + ++ +S+ K C C N +T AI+ CGHVFC KC+ ++ A + C C Sbjct: 615 EDEQQLEALRSIAK---CSVCSKNWKDT----AITVCGHVFCSKCTQERLAARLRRCPSC 667 Query: 273 NKPCKERNLVNL 238 N+ +L+++ Sbjct: 668 NRGFSANDLLSI 679
>TRI26_MOUSE (Q99PN3) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 40.0 bits (92), Expect = 0.004 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD---KFIATDKVCLMCNKPCKER 253 +S+E+ C C L + +++ CGHVFC+ C+ VC +C KP K+ Sbjct: 8 RSLEEEVTCSICLDYLRDPVTI----DCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKE 63 Query: 252 NL 247 N+ Sbjct: 64 NI 65
>TRI26_PANTR (Q7YR34) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 539 Score = 40.0 bits (92), Expect = 0.004 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD---KFIATDKVCLMCNKPCKER 253 +S+E+ C C L + +++ CGHVFC+ C+ + VC +C KP K+ Sbjct: 8 RSLEEEVTCSICLDYLRDPVTI----DCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKE 63 Query: 252 NL 247 N+ Sbjct: 64 NI 65
>TRI26_HUMAN (Q12899) Tripartite motif protein 26 (Zinc finger protein 173)| (Acid finger protein) (AFP) (RING finger protein 95) Length = 539 Score = 40.0 bits (92), Expect = 0.004 Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD---KFIATDKVCLMCNKPCKER 253 +S+E+ C C L + +++ CGHVFC+ C+ + VC +C KP K+ Sbjct: 8 RSLEEEVTCSICLDYLRDPVTI----DCGHVFCRSCTTDVRPISGSRPVCPLCKKPFKKE 63 Query: 252 NL 247 N+ Sbjct: 64 NI 65
>TRI26_RAT (P62603) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 542 Score = 40.0 bits (92), Expect = 0.004 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD---KFIATDKVCLMCNKPCKER 253 +S+E+ C C L + +++ CGHVFC+ C+ VC +C KP K+ Sbjct: 8 RSLEEEVTCSICLDYLRDPVTI----DCGHVFCRSCTSDIRPISGNRPVCPLCKKPFKKE 63 Query: 252 NL 247 N+ Sbjct: 64 NI 65
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 691 Score = 39.7 bits (91), Expect = 0.005 Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 2/84 (2%) Frame = -2 Query: 483 KLKSLFPISFTEENARQ-KSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCS-D 310 K K+ S +E+ RQ ++ +S+ K C C N +T AI+ CGHVFC C+ + Sbjct: 613 KYKTNNTSSILQEDERQLEALRSIAK---CSVCSKNWKDT----AITVCGHVFCLGCTQE 665 Query: 309 KFIATDKVCLMCNKPCKERNLVNL 238 + A + C CNK +L+++ Sbjct: 666 RLAARLRRCPTCNKGFSANDLLSI 689
>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 703 Score = 39.7 bits (91), Expect = 0.005 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%) Frame = -2 Query: 492 EKLKLKSLFPISFTEENARQK--SNKSVEKSYI-----CPSCKSNLTNTMSLVAISTCGH 334 EK+K++ L +N + K SN S E+ + C C++N NT A+ TCGH Sbjct: 614 EKMKVR-LEHAQKDRDNWKNKALSNSSEEEEMLRTFALCTICRNNFKNT----ALKTCGH 668 Query: 333 VFCKKCSDKFIATD-KVCLMCNK 268 +FC +C D I+ + C C++ Sbjct: 669 LFCNQCVDDRISNRMRKCPTCSR 691
>RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1085 Score = 38.9 bits (89), Expect = 0.008 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 6/80 (7%) Frame = -2 Query: 456 FTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFI------AT 295 F E+ + N K C C + ++ V + CGH FC+ C ++I + Sbjct: 813 FIEDFKTKYPNSDALKDLECSICTCEAISPLTSVVFTRCGHPFCESCLLEYIQFQNKKGS 872 Query: 294 DKVCLMCNKPCKERNLVNLE 235 + +C C + R L+ LE Sbjct: 873 ETICPNCRAAVESRYLLKLE 892
>RNF4_HUMAN (P78317) RING finger protein 4| Length = 190 Score = 38.5 bits (88), Expect = 0.011 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSVEKS--YICPSCK---SNLTNTMSLVAISTCG 337 + +E + + ++ + T NAR + + S CP C S + L+ + CG Sbjct: 96 DDEELSRDRDVYVTTHTPRNARDEGATGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECG 155 Query: 336 HVFCKKCSDKFIATDKVCLMCNK 268 HVFC +C + C C K Sbjct: 156 HVFCSQCLRDSLKNANTCPTCRK 178
>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1114 Score = 37.7 bits (86), Expect = 0.018 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Frame = -2 Query: 408 SYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK------VCLMCNKPCKERNL 247 S+ C C + +S V+I+ C H FC+ C ++I + C C P E N+ Sbjct: 855 SFECAICTTECIEPLSAVSITECLHTFCEPCLAEYIEFQQNKKLSINCPYCRMPISEANV 914 Query: 246 VNLEK 232 + L++ Sbjct: 915 LKLKE 919
>BRE1_ASHGO (Q757D9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)| Length = 643 Score = 37.7 bits (86), Expect = 0.018 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKK-CSDKFIATDKVCLMCNKPCKERNLV 244 C C N +T+ I TCGHVFC C ++ A + C CNK +L+ Sbjct: 591 CSLCSKNWKDTV----IKTCGHVFCADCCKERLAARMRKCPTCNKGFSSNDLL 639
>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)| Length = 258 Score = 37.4 bits (85), Expect = 0.023 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 6/62 (9%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKV------CLMCNKPC 262 K ++ +CP C+ +L +S + CGH+FC+ C + + C +C KP Sbjct: 6 KDNQEEGVCPICQESLKEAVS----TNCGHLFCRVCLTQHVEKASASGVFCCCPLCRKPS 61 Query: 261 KE 256 +E Sbjct: 62 EE 63
>TRI26_PIG (O77666) Tripartite motif protein 26 (Zinc finger protein 173)| Length = 545 Score = 37.4 bits (85), Expect = 0.023 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATD---KVCLMCNKPCKER 253 +S+E+ C C L + +++ CGHVFC+ C+ VC +C KP + Sbjct: 8 RSLEEEVTCSICLDYLRDPVTI----DCGHVFCRSCTTDIHPVSGGRPVCPLCKKPFTKE 63 Query: 252 NL 247 N+ Sbjct: 64 NI 65
>PEX12_MOUSE (Q8VC48) Peroxisome assembly protein 12 (Peroxin-12)| Length = 359 Score = 37.0 bits (84), Expect = 0.031 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSV--EKSYICPSCKSNLTNTMSLVAISTCGHVF 328 E QE +K + P + S+ + + +CP C+ N ++T G+VF Sbjct: 268 ENQEAIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVND---TVLATSGYVF 324 Query: 327 CKKCSDKFIATDKVCLMCNKPCKERNLVNL 238 C +C ++ + + C + P + ++L+ L Sbjct: 325 CYRCVFNYVRSHQACPITGYPTEVQHLIKL 354
>PEX12_CRILO (Q9ET67) Peroxisome assembly protein 12 (Peroxin-12)| Length = 359 Score = 37.0 bits (84), Expect = 0.031 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSV--EKSYICPSCKSNLTNTMSLVAISTCGHVF 328 E QE +K + P + S+ + + +CP C+ N ++T G+VF Sbjct: 268 ENQETIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVND---TVLATSGYVF 324 Query: 327 CKKCSDKFIATDKVCLMCNKPCKERNLVNL 238 C +C ++ + + C + P + ++L+ L Sbjct: 325 CYRCVFNYVRSHQACPITGYPTEVQHLIKL 354
>ATL3I_ARATH (Q7X843) RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion| protein) Length = 349 Score = 37.0 bits (84), Expect = 0.031 Identities = 14/58 (24%), Positives = 28/58 (48%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNL 247 S+E+ + C C + ++T L + C H F C D ++ ++ C +C + N+ Sbjct: 200 SLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSLSTSNV 257
>BRE1_CAEBR (Q60YN5) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 828 Score = 37.0 bits (84), Expect = 0.031 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = -2 Query: 453 TEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLM 277 T + Q++N+ ++++ CPSCK+ + + L C H+FC+ C T + C Sbjct: 758 TGDQVLQEANRQMKETLTCPSCKTRPKDCIML----KCYHLFCETCIKTMYDTRQRKCPK 813 Query: 276 CN 271 CN Sbjct: 814 CN 815
>RNF4_RAT (O88846) RING finger protein 4 (SNURF)| Length = 194 Score = 37.0 bits (84), Expect = 0.031 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 5/83 (6%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSVEKS--YICPSCK---SNLTNTMSLVAISTCG 337 + +E K K ++ + T + + + + S CP C S + L+ + CG Sbjct: 100 DDEELSKDKDVYVTTHTPRSTKDEGTTGLRPSGTVSCPICMDGYSEIVQNGRLIVSTECG 159 Query: 336 HVFCKKCSDKFIATDKVCLMCNK 268 HVFC +C + C C K Sbjct: 160 HVFCSQCLRDSLKNANTCPTCRK 182
>PEX12_HUMAN (O00623) Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome| assembly factor 3) (PAF-3) Length = 359 Score = 36.6 bits (83), Expect = 0.040 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSV--EKSYICPSCKSNLTNTMSLVAISTCGHVF 328 E QE +K + P + S+ + + +CP C+ N ++T G+VF Sbjct: 268 ENQETIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKTRVND---TVLATSGYVF 324 Query: 327 CKKCSDKFIATDKVCLMCNKPCKERNLVNL 238 C +C ++ + + C + P + ++L+ L Sbjct: 325 CYRCVFHYVRSHQACPITGYPTEVQHLIKL 354
>CWC24_CANAL (Q5ACW2) Pre-mRNA-splicing factor CWC24| Length = 216 Score = 36.2 bits (82), Expect = 0.052 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Frame = -2 Query: 465 PISFTEENARQKSNKSVEK-SYICPSCKSNLTNTMSLVAISTCGHVFCKKC-SDKFIATD 292 PI E QK K E + C CKS+ + + + CGH+FCK C D++ A Sbjct: 133 PIKKDWEIGGQKEVKEKEDIPFKCVLCKSDYKSPIK----TECGHIFCKACFLDRYKAKK 188 Query: 291 K-VCLMCNKPCKERNL-VNLEK 232 K C +C+K + VN++K Sbjct: 189 KGTCFICHKETNGTMVPVNIDK 210
>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5| protein 24) (Cell cycle control protein cwf24) Length = 533 Score = 36.2 bits (82), Expect = 0.052 Identities = 16/63 (25%), Positives = 29/63 (46%) Frame = -2 Query: 447 ENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 E K+ K + ++C CK + + ++ +TCGH FC++C+ C+ C Sbjct: 238 EEGMVKNEKKEDIPFVCLICKKDYRSPIA----TTCGHHFCEQCAITRYRKTPTCIQCGA 293 Query: 267 PCK 259 K Sbjct: 294 DTK 296
>PEX12_RAT (O88177) Peroxisome assembly protein 12 (Peroxin-12) (Peroxisome| assembly factor 3) (PAF-3) Length = 359 Score = 36.2 bits (82), Expect = 0.052 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 2/90 (2%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSV--EKSYICPSCKSNLTNTMSLVAISTCGHVF 328 E QE +K + P + S+ + + +CP C+ N ++T G+VF Sbjct: 268 ENQETIKSLTALPTPPPPVHLDYNSDSPLLPKMKTVCPLCRKARVND---TVLATSGYVF 324 Query: 327 CKKCSDKFIATDKVCLMCNKPCKERNLVNL 238 C +C ++ + + C + P + ++L+ L Sbjct: 325 CYRCVFNYVRSHQACPITGYPTEVQHLIKL 354
>RAD18_NEUCR (P33288) Postreplication repair ubiquitin-protein ligase E3 rad-18| (EC 6.-.-.-) (UV radiation sensitivity protein 2) Length = 501 Score = 36.2 bits (82), Expect = 0.052 Identities = 16/57 (28%), Positives = 28/57 (49%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNL 247 VE+++ C CK + M +++C H FC C + ++ D C +C +E L Sbjct: 28 VEQAFRCHVCKDFYDSPM----LTSCNHTFCSLCIRRCLSVDSKCPLCRATDQESKL 80
>ATL2A_ARATH (O22755) RING-H2 finger protein ATL2A (RING-H2 zinc finger protein| RHA3a) Length = 185 Score = 35.8 bits (81), Expect = 0.068 Identities = 19/78 (24%), Positives = 35/78 (44%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCK 322 +G +K L+SL +FT + + S C C ++ + + + CGH F Sbjct: 68 KGLKKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHV 127 Query: 321 KCSDKFIATDKVCLMCNK 268 +C DK++ + C C + Sbjct: 128 ECIDKWLVSRSSCPSCRR 145
>MAT1_MOUSE (P51949) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (p36) (p35) Length = 309 Score = 35.8 bits (81), Expect = 0.068 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = -2 Query: 399 CPSCKSNLTNTMSL-VAISTCGHVFCKKCSD-KFIATDKVCLMCNKPCKERN 250 CP CK+ SL + ++ CGH C+ C D F+ C C P ++ N Sbjct: 6 CPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSN 57
>MAT1_HUMAN (P51948) CDK-activating kinase assembly factor MAT1 (RING finger| protein MAT1) (Menage a trois) (CDK7/cyclin H assembly factor) (p36) (p35) (Cyclin G1-interacting protein) (RING finger protein 66) Length = 309 Score = 35.8 bits (81), Expect = 0.068 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = -2 Query: 399 CPSCKSNLTNTMSL-VAISTCGHVFCKKCSD-KFIATDKVCLMCNKPCKERN 250 CP CK+ SL + ++ CGH C+ C D F+ C C P ++ N Sbjct: 6 CPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSN 57
>DTX3_MOUSE (Q80V91) Protein deltex-3 (Deltex-3) (Deltex3) (mDTX3)| Length = 347 Score = 35.4 bits (80), Expect = 0.089 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 E+ CP C + N +L C H FC+ C + + K C MC + Sbjct: 159 EQETTCPICLGEIQNAKTL---EKCRHSFCEGCITRALQVKKACPMCGR 204
>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)| Length = 347 Score = 35.4 bits (80), Expect = 0.089 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 E+ CP C + N +L C H FC+ C + + K C MC + Sbjct: 159 EQESTCPICLGEIQNAKTL---EKCRHSFCEGCITRALQVKKACPMCGR 204
>YAT9_SCHPO (Q10154) Hypothetical protein C1D4.09c in chromosome I| Length = 240 Score = 35.4 bits (80), Expect = 0.089 Identities = 15/54 (27%), Positives = 30/54 (55%) Frame = -2 Query: 405 YICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLV 244 ++CP + +++T I CGHVF +F +K+C CN+ +E++++ Sbjct: 103 WLCPITRHVMSDTYQFAYIVPCGHVFEYSALKQF--GEKMCFQCNQVYEEKDVI 154
>TRI32_MOUSE (Q8CH72) Tripartite motif protein 32 (EC 6.3.2.-)| Length = 655 Score = 35.0 bits (79), Expect = 0.12 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATD---KVCLMCNKPCKERNLVNL 238 CP C + T + CGH C++C +K +A+ C C+K + +L L Sbjct: 21 CPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQL 77
>PEP7_SCHPO (O13786) Vacuolar segregation protein pep7| Length = 536 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 6/76 (7%) Frame = -2 Query: 402 ICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK-----VCLMCNKPCKERNLVNL 238 ICP C ++ T T CG V C+ C + +C+ CN+ L Sbjct: 280 ICPECNNSFTLTRRRRHCRLCGRVICRFCVLEISLPQHPQPLLICMSCNQNYFRNVLYQT 339 Query: 237 EKG-GTGFAAHDDHLE 193 E+ G+ H +HL+ Sbjct: 340 ERSKSLGYIRHIEHLQ 355
>TRI36_HUMAN (Q9NQ86) Tripartite motif protein 36 (Zinc-binding protein Rbcc728)| (RING finger protein 98) Length = 728 Score = 35.0 bits (79), Expect = 0.12 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT 295 K++E+ ICP+CK T+ + I C H C KC + + T Sbjct: 25 KNIERELICPACKELFTHPL----ILPCQHSICHKCVKELLLT 63
>LNX1_HUMAN (Q8TBB1) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)| (Ligand of Numb-protein X 1) Length = 728 Score = 35.0 bits (79), Expect = 0.12 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Frame = -2 Query: 450 EENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN 271 EEN + V+ IC C L + + + CGH +C C F+ C M Sbjct: 24 EENHFYSYPEEVDDDLICHICLQALLDPLD----TPCGHTYCTLCLTNFLVEKDFCPMDR 79 Query: 270 KP-----CKERNLV 244 KP CK+ +++ Sbjct: 80 KPLVLQHCKKSSIL 93
>CWC24_CANGA (Q6FXX1) Pre-mRNA-splicing factor CWC24| Length = 226 Score = 35.0 bits (79), Expect = 0.12 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 C CK + + + CGH FC+KC I DK C +C + Sbjct: 165 CVLCKESYERPVK----TNCGHYFCQKCFVNRIKIDKSCFICGE 204
>BRE1_CAEEL (P34537) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-) (RING finger| protein rfp-1) Length = 837 Score = 35.0 bits (79), Expect = 0.12 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = -2 Query: 492 EKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCS 313 E++K P + + +++N+ ++++ CPSCK+ + + L C H+FC+ C Sbjct: 755 ERVKRNESVPAQ-SGDQVLEEANRQMKETLTCPSCKTRPKDCIML----KCYHLFCETCI 809 Query: 312 DKFIAT-DKVCLMCN 271 T + C CN Sbjct: 810 KTMYDTRQRKCPKCN 824
>TRI40_RAT (Q6MFY8) Tripartite motif protein 40 (RING finger protein 35)| Length = 247 Score = 35.0 bits (79), Expect = 0.12 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Frame = -2 Query: 402 ICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKV-----CLMCNKPCKE 256 ICP C L +S + C H+FC+ C + + V C +C KPC E Sbjct: 11 ICPICLDPLKEAVS----TDCRHLFCRMCLIRHMDKASVSGVLSCPVCRKPCSE 60
>TRI32_HUMAN (Q13049) Tripartite motif protein 32 (EC 6.3.2.-) (Zinc-finger| protein HT2A) (72 kDa Tat-interacting protein) Length = 653 Score = 35.0 bits (79), Expect = 0.12 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATD---KVCLMCNKPCKERNLVNL 238 CP C + T + CGH C++C +K +A+ C C+K + +L L Sbjct: 20 CPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSLTQL 76
>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 344 Score = 34.7 bits (78), Expect = 0.15 Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIA-TDKVCLMCNKPCKERNL 247 K V+++ C CK T M I+ CGH FC C +++ T + C C +E+ + Sbjct: 20 KDVDETLRCHICKEFFTAPM----ITGCGHTFCSLCIQRYLTNTSQRCPTC---MQEQQI 72 Query: 246 VNLEKGGT 223 L K T Sbjct: 73 SQLRKNVT 80
>PPIL2_MOUSE (Q9D787) Peptidyl-prolyl cis-trans isomerase-like 2 (EC 5.2.1.8)| (PPIase) (Rotamase) (Cyclophilin-60) (Cyclophilin-like protein Cyp-60) Length = 521 Score = 34.7 bits (78), Expect = 0.15 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 2/113 (1%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 P EKL KSL ++F K+ E Y CP S T+ +VAI T G+V+ Sbjct: 77 PSTGEKLDGKSLIKLNFA---------KNSEGQYHCPVLYSVFTDNTHIVAIRTTGNVYT 127 Query: 324 KKCSDKFIATDKVC--LMCNKPCKERNLVNLEKGGTGFAAHDDHLEAKNFKHL 172 + ++ K L+ ++P ++++ L+ + D NF H+ Sbjct: 128 YEAVEQLNIKAKNLRDLLTDEPFSRQDIITLQD-----PTNLDKFNVSNFFHV 175
>RAD18_ASPFU (Q4WZJ6) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 418 Score = 34.7 bits (78), Expect = 0.15 Identities = 17/57 (29%), Positives = 26/57 (45%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNL 247 +E S C CK N + I++C H FC C + ++T+ C C +E L Sbjct: 24 LESSLRCQVCKDFFDNPV----ITSCSHTFCSLCIRRCLSTEGKCPACRSSDQELKL 76
>LNX2_HUMAN (Q8N448) Ligand of Numb-protein X 2 (Numb-binding protein 2) (PDZ| domain-containing RING finger protein 1) Length = 690 Score = 34.7 bits (78), Expect = 0.15 Identities = 22/82 (26%), Positives = 30/82 (36%), Gaps = 7/82 (8%) Frame = -2 Query: 492 EKLKLKSLFPISF-------TEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGH 334 E+ SL P+ F T EN V+ +C C L + + CGH Sbjct: 12 EQTSSSSLNPLCFECGQQHWTRENHLYNYQNEVDDDLVCHICLQPLLQPLD----TPCGH 67 Query: 333 VFCKKCSDKFIATDKVCLMCNK 268 FC KC F+ C + K Sbjct: 68 TFCYKCLRNFLQEKDFCPLDRK 89
>RNF4_MOUSE (Q9QZS2) RING finger protein 4| Length = 194 Score = 34.7 bits (78), Expect = 0.15 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 3/47 (6%) Frame = -2 Query: 399 CPSCK---SNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 CP C S + L+ + CGHVFC +C + C C K Sbjct: 136 CPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRK 182
>TRI36_MOUSE (Q80WG7) Tripartite motif protein 36 (Haprin) (Acrosome RBCC| protein) Length = 729 Score = 34.3 bits (77), Expect = 0.20 Identities = 15/36 (41%), Positives = 20/36 (55%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC 316 K++EK ICP+CK T+ + I C H C KC Sbjct: 25 KNIEKELICPACKELFTHPL----ILPCQHSVCHKC 56
>RNF38_HUMAN (Q9H0F5) RING finger protein 38| Length = 515 Score = 34.3 bits (77), Expect = 0.20 Identities = 19/83 (22%), Positives = 33/83 (39%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 P G K ++ L F N + + +C C + + L+ + C H F Sbjct: 435 PRGLTKADIEQLPSYRFNPNNHQSEQT-------LCVVCMCDF-ESRQLLRVLPCNHEFH 486 Query: 324 KKCSDKFIATDKVCLMCNKPCKE 256 KC DK++ ++ C +C E Sbjct: 487 AKCVDKWLKANRTCPICRADASE 509
>ATL3E_ARATH (Q9LUL6) Putative RING-H2 finger protein ATL3E| Length = 204 Score = 34.3 bits (77), Expect = 0.20 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK-PCKERNLVNLEKGGT 223 C C S L + + +C H F +C D ++ ++ C +C K C +++ E GG Sbjct: 88 CVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCLKQSRTRPELGGR 147 Query: 222 GFAAHDDH 199 + + +H Sbjct: 148 DKSFNQNH 155
>TRI55_HUMAN (Q9BYV6) Tripartite motif-containing 55 (Muscle-specific RING| finger protein 2) (MuRF2) (MURF-2) (RING finger protein 29) Length = 548 Score = 34.3 bits (77), Expect = 0.20 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = -2 Query: 459 SFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC-SDKFIATD 292 SF++E Q++ ++EK ICP C T V I C H C+KC SD F A++ Sbjct: 9 SFSKE---QQTMDNLEKQLICPICLEMFTKP---VVILPCQHNLCRKCASDIFQASN 59
>SM3L1_ARATH (Q9FF61) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 1 (EC 3.6.1.-) (SMARCA3-like protein 1) Length = 881 Score = 34.3 bits (77), Expect = 0.20 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = -2 Query: 411 KSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK-VCLMCNKPCKERNLVN 241 + + CP C S TN + I+ C H+FC+ C + + K +C +C + +L N Sbjct: 631 EDFDCPICISPPTN----IIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDLYN 684
>TRI55_RAT (Q5PQN5) Tripartite motif-containing 63 (Muscle-specific RING| finger protein 2) (MuRF2) (MURF-2) (RING finger protein 29) Length = 545 Score = 34.3 bits (77), Expect = 0.20 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%) Frame = -2 Query: 459 SFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC-SDKFIATD 292 SF++E Q++ ++EK ICP C T V I C H C+KC SD F A++ Sbjct: 9 SFSKE---QQTMDNLEKQLICPICLEMFTKP---VVILPCQHNLCRKCASDIFQASN 59
>PEX10_ARATH (Q9SYU4) Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10)| (Pex10p) (PER8) Length = 381 Score = 34.3 bits (77), Expect = 0.20 Identities = 20/64 (31%), Positives = 30/64 (46%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERN 250 S ++V K +C S + + T T CGHVFC C ++ + C +C P + Sbjct: 320 STEAVGKCTLCLSTRQHPTAT-------PCGHVFCWSCIMEWCNEKQECPLCRTPNTHSS 372 Query: 249 LVNL 238 LV L Sbjct: 373 LVCL 376
>MIB1_MOUSE (Q80SY4) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) Length = 1006 Score = 34.3 bits (77), Expect = 0.20 Identities = 18/64 (28%), Positives = 30/64 (46%) Frame = -2 Query: 435 QKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKE 256 Q+ + +++ +CP C L N + L CGH C+ C D+ C +C K + Sbjct: 951 QQQLQDIKEQTMCPVCLDRLKNMIFL-----CGHGTCQLCGDRM----SECPICRKAIER 1001 Query: 255 RNLV 244 R L+ Sbjct: 1002 RILL 1005
>MIB1_HUMAN (Q86YT6) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) (DAPK-interacting protein 1) (DIP-1) (Zinc finger ZZ type with ankyrin repeat domain protein 2) Length = 1006 Score = 34.3 bits (77), Expect = 0.20 Identities = 18/64 (28%), Positives = 30/64 (46%) Frame = -2 Query: 435 QKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKE 256 Q+ + +++ +CP C L N + L CGH C+ C D+ C +C K + Sbjct: 951 QQQLQDIKEQTMCPVCLDRLKNMIFL-----CGHGTCQLCGDRM----SECPICRKAIER 1001 Query: 255 RNLV 244 R L+ Sbjct: 1002 RILL 1005
>RNF24_MOUSE (Q8BGI1) RING finger protein 24| Length = 148 Score = 33.9 bits (76), Expect = 0.26 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKP 265 K + +C C + L I C H F +KC K++ KVC +CN P Sbjct: 70 KELNLHELCAVCLEDFKPRDEL-GICPCKHAFHRKCLVKWLEVRKVCPLCNMP 121
>RNF24_HUMAN (Q9Y225) RING finger protein 24| Length = 148 Score = 33.9 bits (76), Expect = 0.26 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKP 265 K + +C C + L I C H F +KC K++ KVC +CN P Sbjct: 70 KELNLHELCAVCLEDFKPRDEL-GICPCKHAFHRKCLIKWLEVRKVCPLCNMP 121
>DG17_DICDI (P11467) Protein DG17| Length = 458 Score = 33.9 bits (76), Expect = 0.26 Identities = 23/71 (32%), Positives = 30/71 (42%) Frame = -2 Query: 462 ISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVC 283 I F +E+ QK NK Y CP C + S GH CK+C +K + T K C Sbjct: 12 ILFNQESL-QKKNK-----YTCPICFEFIYKKQIYQCKS--GHHACKECWEKSLETKKEC 63 Query: 282 LMCNKPCKERN 250 + C N Sbjct: 64 MTCKSVVNSYN 74
>CWC24_CRYNE (Q5KB05) Pre-mRNA-splicing factor CWC24| Length = 329 Score = 33.9 bits (76), Expect = 0.26 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 2/64 (3%) Frame = -2 Query: 450 EENARQKSNKSVEKS--YICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLM 277 EE R+ + E+ + C C+ T + ++ CGH FC C+ K C Sbjct: 218 EEGVREVEEEDEEEEVPFACLICRQPFTQPV----VTKCGHYFCMGCAAKRFQKSPKCYA 273 Query: 276 CNKP 265 C P Sbjct: 274 CGAP 277
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 33.9 bits (76), Expect = 0.26 Identities = 15/34 (44%), Positives = 18/34 (52%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC 316 +EK CP C LT +SL CGH FC+ C Sbjct: 9 IEKEVTCPICLELLTEPLSL----DCGHSFCQAC 38
>RAD5_CANGA (Q6FY76) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1151 Score = 33.9 bits (76), Expect = 0.26 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 23/114 (20%) Frame = -2 Query: 492 EKLKLKSLFPISFTEENA--------RQKSNKSVEKSYI---------CPSCKSNLTNTM 364 E + +K+L P + EE+ K +SVE +I C C + + Sbjct: 849 ESVDVKTLIPDTEEEEDEVPPFENDELDKLIESVEAKFIDSNQLIPVECSICTAEPIESS 908 Query: 363 SLVAISTCGHVFCKKCSDKF------IATDKVCLMCNKPCKERNLVNLEKGGTG 220 S V ++ C HVFCK+C +++ + + C C + + EKG G Sbjct: 909 SAV-VTECEHVFCKECLEEYGNFQKEKSLQQKCPNCRRDINLNRCLAFEKGSDG 961
>LNX1_MOUSE (O70263) Ubiquitin ligase LNX (EC 6.3.2.-) (Numb-binding protein 1)| (Ligand of Numb-binding protein 1) (Ligand of Numb-protein X 1) Length = 728 Score = 33.9 bits (76), Expect = 0.26 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Frame = -2 Query: 450 EENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN 271 EEN + V+ IC C L + + + CGH +C C F+ C + Sbjct: 28 EENHFYTYTEDVDDDLICHICLQALLDPLD----TPCGHTYCTLCLTNFLVEKDFCPVDR 83 Query: 270 KP-----CKERNLV 244 KP CK+ +++ Sbjct: 84 KPVVLQHCKKSSIL 97
>ATL3J_ARATH (Q9LY41) RING-H2 finger protein ATL3J (RING-H2 finger protein ATL4)| (RING-H2 finger protein RHX1a) Length = 334 Score = 33.9 bits (76), Expect = 0.26 Identities = 21/80 (26%), Positives = 31/80 (38%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 PE + L SL F+ R S S + C C S L + C H F Sbjct: 86 PETERSSVLDSLPIFKFSSVTRRSSSMNSGD----CAVCLSKFEPEDQLRLLPLCCHAFH 141 Query: 324 KKCSDKFIATDKVCLMCNKP 265 C D ++ +++ C +C P Sbjct: 142 ADCIDIWLVSNQTCPLCRSP 161
>ATL1F_ARATH (Q9LQM2) Putative RING-H2 finger protein ATL1F precursor| Length = 332 Score = 33.9 bits (76), Expect = 0.26 Identities = 16/56 (28%), Positives = 25/56 (44%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLVNLEK 232 C C + + ++ ISTC H F C D + K C +C + + +LEK Sbjct: 154 CSICLTEFMDDDTIRLISTCNHSFHTICIDLWFEGHKTCPVCRRELDVEDRTSLEK 209
>RAD18_EMENI (Q02398) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) Length = 443 Score = 33.9 bits (76), Expect = 0.26 Identities = 17/56 (30%), Positives = 25/56 (44%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNL 247 E S C CK N + I++C H FC C + ++T+ C C +E L Sbjct: 25 ETSLRCQVCKDFFDNPV----ITSCSHTFCSLCIRRCLSTEGKCPTCRSSDQELKL 76
>TRAF3_MOUSE (Q60803) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (TRAFAMN) Length = 567 Score = 33.9 bits (76), Expect = 0.26 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -2 Query: 438 RQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK-VCLMCNK 268 ++K K+VE Y C C+ L N + CGH FC+ C +++ C C + Sbjct: 39 KEKFVKTVEDKYKCEKCRLVLCNPKQ----TECGHRFCESCMAALLSSSSPKCTACQE 92
>PEX10_PICAN (Q00940) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PER8) Length = 295 Score = 33.9 bits (76), Expect = 0.26 Identities = 18/59 (30%), Positives = 27/59 (45%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLVNL 238 E S C C S + + + CGHVFC KC ++ + C +C +E L+ L Sbjct: 240 EASRTCMLCLSPMKDP----SCGECGHVFCWKCVLDWVKERQECPLCRAKMRESQLLPL 294
>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic| region Length = 274 Score = 33.9 bits (76), Expect = 0.26 Identities = 16/58 (27%), Positives = 23/58 (39%) Frame = -2 Query: 456 FTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVC 283 F EE K Y CP C + ++ CGHVFC C + + + + C Sbjct: 187 FQEETKEAPKEYGAAKDYRCPICFEPPETAL----MTLCGHVFCCPCLFQMVNSSRTC 240
>CWC24_YEAST (P53769) Pre-mRNA-splicing factor CWC24 (Complexed with CEF1| protein 24) Length = 259 Score = 33.9 bits (76), Expect = 0.26 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Frame = -2 Query: 450 EENARQKSNKSV----EK-SYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKV 286 E NA ++ +K+V EK + C CK + + + ++ CGH FC C K + Sbjct: 177 EWNADKEDSKAVTLDLEKIPFKCTLCKEDYKSPV----VTNCGHYFCGSCFAKDMKKGTK 232 Query: 285 CLMCNK 268 C +C+K Sbjct: 233 CFICHK 238
>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (mCOP1) Length = 733 Score = 33.5 bits (75), Expect = 0.34 Identities = 15/58 (25%), Positives = 24/58 (41%) Frame = -2 Query: 444 NARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN 271 N S + ++CP C + ++ CGH FC KC + + + C CN Sbjct: 123 NGLLNSYEDKSNDFVCPICFDMIEEAY----MTKCGHSFCYKCIHQSLEDNNRCPKCN 176
>MIB1_XENLA (Q6GNY1) Ubiquitin ligase protein MIB1 (EC 6.3.2.-) (Mind bomb| homolog 1) Length = 1011 Score = 33.5 bits (75), Expect = 0.34 Identities = 18/64 (28%), Positives = 29/64 (45%) Frame = -2 Query: 435 QKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKE 256 Q+ + +++ +CP C L N I CGH C+ C D+ C +C K + Sbjct: 952 QQQLQDIKEQTMCPVCLDRLKN-----MIFMCGHGTCQLCGDRM----SECPICRKAIER 1002 Query: 255 RNLV 244 R L+ Sbjct: 1003 RILL 1006
>RNF38_MOUSE (Q8BI21) RING finger protein 38| Length = 518 Score = 33.5 bits (75), Expect = 0.34 Identities = 19/83 (22%), Positives = 33/83 (39%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 P G K ++ L F N + + +C C + + L+ + C H F Sbjct: 438 PRGLTKADIEQLPSYRFNPSNHQSEQT-------LCVVCMCDF-ESRQLLRVLPCNHEFH 489 Query: 324 KKCSDKFIATDKVCLMCNKPCKE 256 KC DK++ ++ C +C E Sbjct: 490 AKCVDKWLKGNRTCPICRADASE 512
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 33.5 bits (75), Expect = 0.34 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -2 Query: 402 ICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN-KPCKERNLVNLEKGG 226 +C C + ++V C H FCK C +++ T+K C MC+ + K R L+++ Sbjct: 17 MCALCGGYFIDATTIVE---CLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDK 73 Query: 225 T 223 T Sbjct: 74 T 74
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 33.5 bits (75), Expect = 0.34 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = -2 Query: 402 ICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN-KPCKERNLVNLEKGG 226 +C C + ++V C H FCK C +++ T+K C MC+ + K R L+++ Sbjct: 17 MCALCGGYFIDATTIVE---CLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDK 73 Query: 225 T 223 T Sbjct: 74 T 74
>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 411 Score = 33.5 bits (75), Expect = 0.34 Identities = 15/51 (29%), Positives = 24/51 (47%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNL 247 C CK L N + ++ CGH FC C +++ + C +C +E L Sbjct: 27 CHICKDFLKNPV----LTPCGHTFCSLCIRGYLSNEPKCPLCLHELRESML 73
>MIB1_BRARE (Q804S5) Ubiquitin ligase protein mib (EC 6.3.2.-) (Mind bomb| protein) Length = 1030 Score = 33.5 bits (75), Expect = 0.34 Identities = 18/64 (28%), Positives = 29/64 (45%) Frame = -2 Query: 435 QKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKE 256 Q+ + +++ +CP C L N I CGH C+ C D+ C +C K + Sbjct: 975 QQQLQDIKEQTMCPVCLDRLKN-----MIFMCGHGTCQLCGDRM----SECPICRKAIER 1025 Query: 255 RNLV 244 R L+ Sbjct: 1026 RILL 1029
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 33.5 bits (75), Expect = 0.34 Identities = 16/62 (25%), Positives = 27/62 (43%) Frame = -2 Query: 432 KSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKER 253 K S+++ YIC + I++C H FC C +++ + C +C E Sbjct: 28 KELDSLQRCYICKEF-------LKAPVITSCNHTFCSHCIREYLIVNSHCPLCKAEQFES 80 Query: 252 NL 247 NL Sbjct: 81 NL 82
>TRAF4_MOUSE (Q61382) TNF receptor-associated factor 4 (Cysteine-rich motif| associated to RING and Traf domains protein 1) Length = 470 Score = 33.1 bits (74), Expect = 0.44 Identities = 12/39 (30%), Positives = 23/39 (58%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIA 298 ++ +CP C + ++ V +STCGH +C C +F++ Sbjct: 13 KRRLLCPLCGKPMRDS---VEVSTCGHRYCDNCLQEFLS 48
>RAD5_ASPFU (Q4WVM1) DNA repair protein rad5 (EC 3.6.1.-)| Length = 1245 Score = 33.1 bits (74), Expect = 0.44 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFI--ATDK----VCLMCNKPCKER 253 E S CP C M A++ C H CKKC + +I TDK C C P R Sbjct: 936 ESSGECPICSEE---PMIDPAVTACWHSACKKCLEDYIRHQTDKGVPPRCFSCRAPVTSR 992 Query: 252 NL 247 ++ Sbjct: 993 DI 994
>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)| (Ubiquitin-protein ligase COP1) (Constitutive photomorphogenesis protein 1 homolog) (hCOP1) Length = 731 Score = 33.1 bits (74), Expect = 0.44 Identities = 15/58 (25%), Positives = 24/58 (41%) Frame = -2 Query: 444 NARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN 271 N S + ++CP C + ++ CGH FC KC + + + C CN Sbjct: 121 NGLINSYEDKSNDFVCPICFDMIEEAY----MTKCGHSFCYKCIHQSLEDNNRCPKCN 174
>PRT1_ARATH (Q8LBL5) Ubiquitin protein ligase PRT1 (EC 6.3.2.-) (Proteolysis 1| protein) Length = 410 Score = 33.1 bits (74), Expect = 0.44 Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEK----SYICPSCKSNLTNTMSLVAISTCG 337 P+ QE K+L EN K NK ++ +C +CK L + L CG Sbjct: 157 PKNQEPTDAKALN----VHENELLKDNKVSKQISKDDLLCSACKELLVRPVVL----NCG 208 Query: 336 HVFCKKC-SDKFIATDKV-CLMCN 271 HV+C+ C D ++K+ C CN Sbjct: 209 HVYCEGCVVDMAEESEKIKCQECN 232
>PCSK5_MOUSE (Q04592) Proprotein convertase subtilisin/kexin type 5 precursor (EC| 3.4.21.-) (Proprotein convertase PC5) (Subtilisin/kexin-like protease PC5) (PC6) (Subtilisin-like proprotein convertase 6) (SPC6) Length = 1877 Score = 33.1 bits (74), Expect = 0.44 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFC-KKCSDKFIATDKVCLMCNKPCKE 256 C +C+ N T+ S H C K C +K +A + VC C + C++ Sbjct: 1311 CKTCEGNATSCNSCEGDFVLDHGVCWKTCPEKHVAVEGVCKHCPERCQD 1359
>RAG1_ONCMY (Q91187) V(D)J recombination-activating protein 1 (RAG-1)| Length = 1073 Score = 33.1 bits (74), Expect = 0.44 Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = -2 Query: 408 SYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFI-ATDKVCLMCNKPCKERNLVNLEK 232 S C C L+ + S C H+FC+ C K+I + C C PC +L K Sbjct: 307 SVTCQVCDHLLSEPVQ----SPCRHLFCRSCIAKYIYSLGPHCPACTLPCGPADLTAPAK 362 Query: 231 GGTG 220 G G Sbjct: 363 GFLG 366
>TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-rich domain| associated with RING and Traf domains protein 1) (Malignant 62) (RING finger protein 83) Length = 470 Score = 32.7 bits (73), Expect = 0.58 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIA 298 ++ +CP C + V +STCGH FC C +F++ Sbjct: 13 KRRLLCPLCGKPMREP---VQVSTCGHRFCDTCLQEFLS 48
>PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) (RING finger protein 51) Length = 326 Score = 32.7 bits (73), Expect = 0.58 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -2 Query: 351 ISTCGHVFCKKCSDKFIATDKVCLMCN-KPCKERNLVNLEKGGT 223 I C H FCK C +++ T K C +C+ + K R L+N+ T Sbjct: 31 IIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKT 74
>PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 326 Score = 32.7 bits (73), Expect = 0.58 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -2 Query: 351 ISTCGHVFCKKCSDKFIATDKVCLMCN-KPCKERNLVNLEKGGT 223 I C H FCK C +++ T K C +C+ + K R L+N+ T Sbjct: 31 IIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKT 74
>RN141_BRARE (Q6IV56) RING finger protein 141| Length = 222 Score = 32.7 bits (73), Expect = 0.58 Identities = 18/55 (32%), Positives = 25/55 (45%) Frame = -2 Query: 438 RQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 R K E+ IC K++L I C H FC+KC DK+ + C +C Sbjct: 137 RVKQLTDEEECCICMDGKADL--------ILPCAHSFCQKCIDKWSGQSRNCPVC 183
>CHFR_HUMAN (Q96EP1) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 32.7 bits (73), Expect = 0.58 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 6/76 (7%) Frame = -2 Query: 447 ENARQKSNK--SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 E+ R + K +E++ C C+ L + +SL C H FC C ++ +C C Sbjct: 286 EDVRAAAGKPDKMEETLTCIICQDLLHDCVSL---QPCMHTFCAACYSGWMERSSLCPTC 342 Query: 273 NKP----CKERNLVNL 238 P CK L NL Sbjct: 343 RCPVERICKNHILNNL 358
>PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 324 Score = 32.7 bits (73), Expect = 0.58 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = -2 Query: 351 ISTCGHVFCKKCSDKFIATDKVCLMCN-KPCKERNLVNLEKGGT 223 I C H FCK C +++ T K C +C+ + K R L+N+ T Sbjct: 31 IIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKT 74
>ATL4O_ARATH (Q8W571) RING-H2 finger protein ATL4O precursor| Length = 322 Score = 32.7 bits (73), Expect = 0.58 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%) Frame = -2 Query: 432 KSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKER 253 K +K K C C + L + ++ + C H+F C D ++ + C +C + Sbjct: 112 KESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAK 171 Query: 252 -NLVNLEKGGTGFAAHDDHL 196 N E G AA DH+ Sbjct: 172 SNKPGDEDDGVPLAAMRDHV 191
>RAD5_GIBZE (Q4IJ84) DNA repair protein RAD5 (EC 3.6.1.-)| Length = 1154 Score = 32.7 bits (73), Expect = 0.58 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFI--ATDKV----CLMCNKPCKERNLVNL 238 CP C N + ++ C H CKKC +I TDK C C +P +R+L + Sbjct: 900 CPLCFEEPMNDQT---VTGCWHSACKKCLLDYIKHQTDKAEVPRCFSCREPINKRDLFEV 956 Query: 237 EKGGTGFAAHDD 202 + HDD Sbjct: 957 VR-------HDD 961
>SMRA3_HUMAN (Q14527) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (DNA binding protein/plasminogen activator inhibitor 1 regulator) (Helicase-like tran Length = 1009 Score = 32.3 bits (72), Expect = 0.75 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERNLV 244 C C +LT + I+ C HVFCK C + I ++ C +C E NL+ Sbjct: 760 CAICLDSLT----VPVITHCAHVFCKPCICQVIQNEQPHAKCPLCRNDIHEDNLL 810
>ATL5L_ARATH (Q9FIR0) Putative RING-H2 finger protein ATL5L| Length = 289 Score = 32.3 bits (72), Expect = 0.75 Identities = 10/28 (35%), Positives = 21/28 (75%) Frame = -2 Query: 351 ISTCGHVFCKKCSDKFIATDKVCLMCNK 268 ++TC HVF ++C D+++ ++K C +C + Sbjct: 131 LTTCYHVFHQECIDQWLESNKTCPVCRR 158
>MIB_DROME (Q9VUX2) Ubiquitin ligase protein mind-bomb (EC 6.3.2.-) (Mind bomb| homolog) (D-mib) Length = 1226 Score = 32.3 bits (72), Expect = 0.75 Identities = 16/60 (26%), Positives = 30/60 (50%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLV 244 + +++ +CP C + N + L CGH C+ C D+ + C +C K ++R L+ Sbjct: 1175 QDIKEQTMCPVCFDRIKNMVFL-----CGHGTCQMCGDQI----EGCPICRKTVEKRILL 1225
>RNF5_CAEEL (Q09463) RING finger protein 5| Length = 235 Score = 32.3 bits (72), Expect = 0.75 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 447 ENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT---DKVCLM 277 E SNK + C C + + +S CGH+FC C +++ T ++VC + Sbjct: 10 EEPTSSSNKDESARFECNICLDAAKDAV----VSLCGHLFCWPCLSQWLDTRPNNQVCPV 65 Query: 276 C 274 C Sbjct: 66 C 66
>RN126_MOUSE (Q91YL2) RING finger protein 126| Length = 313 Score = 32.3 bits (72), Expect = 0.75 Identities = 24/95 (25%), Positives = 38/95 (40%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 P +K K+++L + TEE+ V CP CK + S+ + C H+F Sbjct: 204 PPPADKEKIQALPTVPVTEEH--------VGSGLECPVCKEDYALGESVRQLP-CNHLFH 254 Query: 324 KKCSDKFIATDKVCLMCNKPCKERNLVNLEKGGTG 220 C ++ C +C K +N G TG Sbjct: 255 DSCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTG 289
>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint| with forkhead and RING finger domains protein) Length = 664 Score = 32.3 bits (72), Expect = 0.75 Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = -2 Query: 447 ENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 ++A K +K +E++ C C+ L + +SL C H FC C ++ +C C Sbjct: 288 KDASVKPDK-MEETLTCIICQDLLHDCVSL---QPCMHTFCAACYSGWMERSSLCPTCRC 343 Query: 267 P----CKERNLVNL 238 P CK L NL Sbjct: 344 PVERICKNHILNNL 357
>ATL1B_ARATH (Q9LM69) RING-H2 finger protein ATL1B| Length = 197 Score = 32.3 bits (72), Expect = 0.75 Identities = 20/78 (25%), Positives = 34/78 (43%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCK 322 +G +K L+SL ++F+ E+ EK C C + + L + CGH F Sbjct: 83 KGLKKKVLQSLPKLTFSPESPES------EKFAECAICLAEFSAGDELRVLPQCGHGFHV 136 Query: 321 KCSDKFIATDKVCLMCNK 268 C D ++ + C C + Sbjct: 137 ACIDTWLGSHSSCPSCRQ 154
>RN126_XENTR (Q6DIP3) RING finger protein 126| Length = 311 Score = 32.0 bits (71), Expect = 0.98 Identities = 24/94 (25%), Positives = 37/94 (39%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 P + K+++L I TEE+ V CP CK + T S+ + C H+F Sbjct: 200 PPPADTEKIQALPTIQITEEH--------VGSGLECPVCKEDYTVGESVRQLP-CNHLFH 250 Query: 324 KKCSDKFIATDKVCLMCNKPCKERNLVNLEKGGT 223 C ++ C +C K +N G T Sbjct: 251 NDCIIPWLEQHDTCPVCRKSLSGQNTATNPPGLT 284
>PEX10_YEAST (Q05568) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 337 Score = 32.0 bits (71), Expect = 0.98 Identities = 15/61 (24%), Positives = 29/61 (47%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLVNLE 235 E S C C N+++ + + CGH+FC C + C +C + C+ + ++ L Sbjct: 281 EASRKCILCLMNMSDP----SCAPCGHLFCWSCLMSWCKERPECPLCRQHCQPQEILVLR 336 Query: 234 K 232 + Sbjct: 337 Q 337
>ATL5F_ARATH (Q9LX93) RING-H2 finger protein ATL5F| Length = 301 Score = 32.0 bits (71), Expect = 0.98 Identities = 13/45 (28%), Positives = 19/45 (42%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKP 265 C C + SL + C H F C D ++ + K C +C P Sbjct: 135 CSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAP 179
>ATL1C_ARATH (Q9SK92) RING-H2 finger protein ATL1C precursor (RING-H2 finger| protein ATL15) Length = 381 Score = 32.0 bits (71), Expect = 0.98 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 CP C + + +L I C HVF C D ++ + C +C Sbjct: 118 CPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLC 159
>RFFL_HUMAN (Q8WZ73) Rififylin (RING finger and FYVE-like domain-containing| protein 1) (FYVE-RING finger protein Sakura) (Fring) (Caspases-8 and -10-associated RING finger protein 2) (CARP-2) (Caspase regulator CARP2) (RING finger protein 189) (RING finge Length = 363 Score = 32.0 bits (71), Expect = 0.98 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 C SC ++ NT C FC CS + ++CL+C + Sbjct: 47 CKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQR 90
>CWC24_NEUCR (Q7SDY3) Pre-mRNA-splicing factor cwc-24| Length = 405 Score = 32.0 bits (71), Expect = 0.98 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 1/60 (1%) Frame = -2 Query: 450 EENARQKSNKSVEK-SYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 EE+A +E + C C+ +N+ ++ CGH FC+ C+ K D C C Sbjct: 292 EEDADAAEEALLENIPFACIICRGPYSNSP---VVTRCGHYFCEACALKRYRKDPSCAAC 348
>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 672 Score = 32.0 bits (71), Expect = 0.98 Identities = 14/57 (24%), Positives = 23/57 (40%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNL 247 ++K ++CP C + + ++ CGH FC C + C C NL Sbjct: 41 LDKDFLCPICMQIIKDAF----LTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNL 93
>PEX12_CAEEL (Q19189) Putative peroxisome assembly protein 12 (Peroxin-12)| Length = 359 Score = 32.0 bits (71), Expect = 0.98 Identities = 15/54 (27%), Positives = 25/54 (46%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLVNL 238 CP C N A+ G+VFC C ++++ T C + P ++L+ L Sbjct: 307 CPICLKKRVND---TALFVSGYVFCYTCINQYVNTYNKCPVTGCPANVQHLIRL 357
>ATL5K_ARATH (Q9LSW9) RING-H2 finger protein ATL5K (RING-H2 finger protein| ATL16) Length = 375 Score = 32.0 bits (71), Expect = 0.98 Identities = 17/61 (27%), Positives = 26/61 (42%) Frame = -2 Query: 456 FTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLM 277 FT E ++ +S E C C S + L I C H+F C D ++ + C + Sbjct: 123 FTGEGEEEEEKRSQE----CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPL 178 Query: 276 C 274 C Sbjct: 179 C 179
>TRIM5_HUMAN (Q9C035) Tripartite motif protein 5 (EC 6.3.2.-) (RING finger| protein 88) Length = 493 Score = 31.6 bits (70), Expect = 1.3 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC 316 +V++ CP C LT +SL CGH FC+ C Sbjct: 8 NVKEEVTCPICLELLTQPLSL----DCGHSFCQAC 38
>RNG2A_XENLA (Q66J69) Ubiquitin ligase protein RING2-A (EC 6.3.2.-) (RING finger| protein 2-A) (RING finger protein 1B-A) (RING1b-A) Length = 344 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 38 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCSDCIVTALRSGNKECPTCRK 89
>RING1_RAT (Q6MGB6) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 38 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCSDCIVTALRSGNKECPTCRK 89
>RING1_MOUSE (O35730) Polycomb complex protein RING1 (RING finger protein 1)| (Transcription repressor Ring1A) Length = 406 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 38 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCSDCIVTALRSGNKECPTCRK 89
>RING1_MACMU (Q8WMN5) Polycomb complex protein RING1 (RING finger protein 1)| Length = 377 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 9 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCSDCIVTALRSGNKECPTCRK 60
>RING1_HUMAN (Q06587) Polycomb complex protein RING1 (RING finger protein 1)| Length = 406 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 38 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCSDCIVTALRSGNKECPTCRK 89
>RING1_CANFA (Q5TJF3) Ubiquitin ligase protein RING1 (EC 6.3.2.-) (RING finger| protein 1) (RING1a) Length = 406 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 38 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCSDCIVTALRSGNKECPTCRK 89
>BRE1B_PONPY (Q5RAU7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 31.6 bits (70), Expect = 1.3 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 1/100 (1%) Frame = -2 Query: 495 QEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC 316 + KL+ + + + Q+ K + CP C + + + ++ C HVFC +C Sbjct: 916 RRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAV----LTKCFHVFCFEC 971 Query: 315 -SDKFIATDKVCLMCNKPCKERNLVNLEKGGTGFAAHDDH 199 ++ A + C CN F AHD H Sbjct: 972 VRGRYEARQRKCPKCN---------------AAFGAHDFH 996
>BRE1B_MOUSE (Q3U319) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 31.6 bits (70), Expect = 1.3 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 1/100 (1%) Frame = -2 Query: 495 QEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC 316 + KL+ + + + Q+ K + CP C + + + ++ C HVFC +C Sbjct: 916 RRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAV----LTKCFHVFCFEC 971 Query: 315 -SDKFIATDKVCLMCNKPCKERNLVNLEKGGTGFAAHDDH 199 ++ A + C CN F AHD H Sbjct: 972 VRGRYEARQRKCPKCN---------------AAFGAHDFH 996
>BRE1B_MACFA (Q4R7K7) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) Length = 1001 Score = 31.6 bits (70), Expect = 1.3 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 1/100 (1%) Frame = -2 Query: 495 QEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC 316 + KL+ + + + Q+ K + CP C + + + ++ C HVFC +C Sbjct: 916 RRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAV----LTKCFHVFCFEC 971 Query: 315 -SDKFIATDKVCLMCNKPCKERNLVNLEKGGTGFAAHDDH 199 ++ A + C CN F AHD H Sbjct: 972 VRGRYEARQRKCPKCN---------------AAFGAHDFH 996
>BRE1B_HUMAN (O75150) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95) Length = 1001 Score = 31.6 bits (70), Expect = 1.3 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 1/100 (1%) Frame = -2 Query: 495 QEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC 316 + KL+ + + + Q+ K + CP C + + + ++ C HVFC +C Sbjct: 916 RRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAV----LTKCFHVFCFEC 971 Query: 315 -SDKFIATDKVCLMCNKPCKERNLVNLEKGGTGFAAHDDH 199 ++ A + C CN F AHD H Sbjct: 972 VRGRYEARQRKCPKCN---------------AAFGAHDFH 996
>ATL1L_ARATH (Q6NQG7) RING-H2 finger protein ATL1L| Length = 219 Score = 31.6 bits (70), Expect = 1.3 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 12/77 (15%) Frame = -2 Query: 468 FPISFTEENARQKSNKSVEK-SYI-----------CPSCKSNLTNTMSLVAISTCGHVFC 325 +P+ T ++K+ KS + SY C C S + + TC H F Sbjct: 96 YPVRLTNTGVKRKALKSFQTVSYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFH 155 Query: 324 KKCSDKFIATDKVCLMC 274 +C DK++++ C C Sbjct: 156 VRCIDKWLSSHSSCPTC 172
>BRE1B_RAT (Q8CJB9) Ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING| finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) Length = 1002 Score = 31.6 bits (70), Expect = 1.3 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 1/100 (1%) Frame = -2 Query: 495 QEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC 316 + KL+ + + + Q+ K + CP C + + + ++ C HVFC +C Sbjct: 917 RRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAV----LTKCFHVFCFEC 972 Query: 315 -SDKFIATDKVCLMCNKPCKERNLVNLEKGGTGFAAHDDH 199 ++ A + C CN F AHD H Sbjct: 973 VRGRYEARQRKCPKCN---------------AAFGAHDFH 997
>BRCA1_MOUSE (P48754) Breast cancer type 1 susceptibility protein homolog| Length = 1812 Score = 31.6 bits (70), Expect = 1.3 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 3/72 (4%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERN 250 +++K CP C + +S + C H+FCK C K + K C +C +R+ Sbjct: 17 AMQKILECPICLELIKEPVS----TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRS 72 Query: 249 LVNLEKGGTGFA 214 L +G T F+ Sbjct: 73 L----QGSTRFS 80
>PRP19_CAEEL (Q10051) PRP19/PSO4 homolog| Length = 492 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/65 (32%), Positives = 33/65 (50%) Frame = -2 Query: 408 SYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLVNLEKG 229 S++C LT + +S GH+F ++ KFIA + + + E LV+L+ G Sbjct: 2 SFVC-GISGELTEDPVVSQVS--GHIFDRRLIVKFIAENGTDPISHGELSEDQLVSLKSG 58 Query: 228 GTGFA 214 GTG A Sbjct: 59 GTGSA 63
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183| Length = 343 Score = 31.6 bits (70), Expect = 1.3 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 14/99 (14%) Frame = -2 Query: 456 FTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLM 277 + +EN S++ E + C C+ N + ++ C H FC+ C+ + T C + Sbjct: 244 YEDENYEVGSDEE-EIPFKCFICRQTFQNPV----VTKCRHYFCESCALQHFRTTPRCYV 298 Query: 276 CNK-------PCKERNLVNLEK-------GGTGFAAHDD 202 C++ P KE + LEK G +GF D Sbjct: 299 CDQQTNGVFNPAKEL-IAKLEKHRAAEGGGASGFPEDPD 336
>TOPRS_DROME (Q9V8P9) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (dTopors) Length = 1038 Score = 31.6 bits (70), Expect = 1.3 Identities = 15/56 (26%), Positives = 26/56 (46%) Frame = -2 Query: 432 KSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKP 265 + N +VE++ P+C L+ +C H FC KC ++ C +C +P Sbjct: 88 EENGTVERNSPPPNCAICLSRCRRKCFTDSCMHQFCFKCLCEWSKIKPECPLCKQP 143
>RNG2B_XENLA (Q7ZWM8) Ubiquitin ligase protein RING2-B (EC 6.3.2.-) (RING finger| protein 2-B) (RING finger protein 1B-B) (RING1b-B) Length = 343 Score = 31.6 bits (70), Expect = 1.3 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 37 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCSDCIVTALRSGNKECPTCRK 88
>TRI63_MOUSE (Q38HM4) Ubiquitin ligase TRIM63 (EC 6.3.2.-) (Tripartite| motif-containing 63) (Muscle-specific RING finger protein 1) (MuRF1) (MURF-1) (Muscle RING finger protein 1) Length = 350 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD 310 +++EK ICP C T V I C H C+KC++ Sbjct: 15 ENLEKQLICPICLEMFTKP---VVILPCQHNLCRKCAN 49
>RING2_RAT (Q4KLY4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 308 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 41 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCADCIITALRSGNKECPTCRK 92
>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)| Length = 687 Score = 31.2 bits (69), Expect = 1.7 Identities = 16/63 (25%), Positives = 23/63 (36%) Frame = -2 Query: 456 FTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLM 277 + EN V+ +C C L + + CGH FC KC F+ C + Sbjct: 32 WARENHLYNYQGEVDDDLVCHICLQPLLQPLD----TPCGHTFCHKCLRNFLQEKDFCPL 87 Query: 276 CNK 268 K Sbjct: 88 DRK 90
>CWC24_DEBHA (Q6BYU0) Pre-mRNA-splicing factor CWC24| Length = 232 Score = 31.2 bits (69), Expect = 1.7 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%) Frame = -2 Query: 495 QEKLKLKSLFPISFTEENARQKSNKSVEK-SYICPSCKSNLTNTMSLVAISTCGHVFCKK 319 +++LK + + +QK +KS E+ Y C C + T L + C H+FC+K Sbjct: 139 RDELKQRKPIEKEWETVTEQQKPDKSKEQVPYRCVLCSKDYT----LPVKTECNHLFCQK 194 Query: 318 C-SDKFIATDKV-CLMCNK 268 C +++ K C +C K Sbjct: 195 CFMNRYRNLKKPNCFICGK 213
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 31.2 bits (69), Expect = 1.7 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 C CK L ++ ++ CGH FC C K++ + C +C Sbjct: 32 CHICKDFLKASV----LTPCGHSFCSICIRKYLQKESKCPLC 69
>RING2_PONPY (Q5R9J5) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 41 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCADCIITALRSGNKECPTCRK 92
>RING2_MOUSE (Q9CQJ4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 41 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCADCIITALRSGNKECPTCRK 92
>RING2_HUMAN (Q99496) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) (RING finger protein BAP-1) (DinG protein) (Huntingtin-interacting protein 2-interacting protein 3) (HIP2-interacting protein 3) Length = 336 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 41 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCADCIITALRSGNKECPTCRK 92
>RING2_BRARE (Q803I4) Ubiquitin ligase protein RING2 (EC 6.3.2.-) (RING finger| protein 2) (RING finger protein 1B) (RING1b) Length = 336 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT-DKVCLMCNK 268 S +S+ +CP C L NTM+ C H FC C + + +K C C K Sbjct: 41 SPRSLHSELMCPICLDMLKNTMT---TKECLHRFCADCIITALRSGNKECPTCRK 92
>ATL1E_ARATH (Q9C7E9) Putative RING-H2 finger protein ATL1E| Length = 336 Score = 31.2 bits (69), Expect = 1.7 Identities = 12/43 (27%), Positives = 21/43 (48%) Frame = -2 Query: 402 ICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 ICP C S + ++ + C H F +C D+++ C +C Sbjct: 289 ICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVC 331
>A33_PLEWA (Q02084) Zinc-binding protein A33| Length = 624 Score = 31.2 bits (69), Expect = 1.7 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKF--IATDKVCLMCNKPCKER 253 CP C+S + L CGH FCK C DK A+ C C + ER Sbjct: 162 CPLCRSLFKEPVIL----ECGHNFCKHCIDKSWESASAFSCPECKEVLTER 208
>TRAF3_HUMAN (Q13114) TNF receptor-associated factor 3 (CD40 receptor-associated| factor 1) (CRAF1) (CD40-binding protein) (CD40BP) (LMP1-associated protein) (LAP1) (CAP-1) Length = 568 Score = 31.2 bits (69), Expect = 1.7 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = -2 Query: 465 PISFTEENA-RQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK 289 P+ E+ ++K K+VE Y C C L + + CGH FC+ C +++ Sbjct: 30 PVFVPEQGGYKEKFVKTVEDKYKCEKCHLVLCSPKQ----TECGHRFCESCMAALLSSSS 85 Query: 288 -VCLMCNK 268 C C + Sbjct: 86 PKCTACQE 93
>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 352 Score = 31.2 bits (69), Expect = 1.7 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 9/86 (10%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSVEKSY---------ICPSCKSNLTNTMSLVAI 349 E +E+ + + + S E RQ S E+ +C CK L + + I Sbjct: 93 EEEEEEEEEDMSHFSLRLEGGRQDSEDEEERLINLSELTPYILCSICKGYLIDATT---I 149 Query: 348 STCGHVFCKKCSDKFIATDKVCLMCN 271 + C H FCK C + C CN Sbjct: 150 TECLHTFCKSCIVRHFYYSNRCPKCN 175
>ATL5J_ARATH (Q8L9W3) RING-H2 finger protein ATL5J| Length = 163 Score = 31.2 bits (69), Expect = 1.7 Identities = 12/48 (25%), Positives = 24/48 (50%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 + +S C C ++ + S + C H F + C+D +++ VC +C Sbjct: 98 IARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVC 145
>TRI63_RAT (Q91Z63) Ubiquitin ligase TRIM63 (EC 6.3.2.-) (Tripartite| motif-containing 63) (Muscle-specific RING finger protein 1) (MuRF1) (MURF-1) Length = 351 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD 310 +++EK ICP C T V I C H C+KC++ Sbjct: 15 ENLEKQLICPICLEMFTKP---VVILPCQHNLCRKCAN 49
>TRI63_HUMAN (Q969Q1) Ubiquitin ligase TRIM63 (EC 6.3.2.-) (Tripartite| motif-containing 63) (Muscle-specific RING finger protein 1) (MuRF1) (MURF-1) (RING finger protein 28) (Striated muscle RING zinc finger protein) (Iris RING finger protein) Length = 353 Score = 31.2 bits (69), Expect = 1.7 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD 310 +++EK ICP C T V I C H C+KC++ Sbjct: 15 ENLEKQLICPICLEMFTKP---VVILPCQHNLCRKCAN 49
>CWC24_USTMA (Q4P400) Pre-mRNA-splicing factor CWC24| Length = 355 Score = 31.2 bits (69), Expect = 1.7 Identities = 12/46 (26%), Positives = 21/46 (45%) Frame = -2 Query: 405 YICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 + C C+ T+ + ++ C H FC C+ K A + C C + Sbjct: 262 FACLICRKAFTDPV----VTRCAHYFCSSCAIKRFAKNSKCFACGQ 303
>R126A_XENLA (Q7T0Q3) RING finger protein 126-A| Length = 312 Score = 31.2 bits (69), Expect = 1.7 Identities = 22/85 (25%), Positives = 33/85 (38%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 P + K+++L I TEE+ V CP CK + T V C H+F Sbjct: 201 PPPADNEKIQALPTIQITEEH--------VGSGLECPVCKEDYT-VGECVRQLPCNHLFH 251 Query: 324 KKCSDKFIATDKVCLMCNKPCKERN 250 C ++ C +C K +N Sbjct: 252 NDCIIPWLEQHDTCPVCRKSLSGQN 276
>ATL2D_ARATH (Q9SL78) Putative RING-H2 finger protein ATL2D precursor (RING-H2| finger protein ATL12) Length = 390 Score = 31.2 bits (69), Expect = 1.7 Identities = 17/63 (26%), Positives = 27/63 (42%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLV 244 K +++ C C S + L + C H F C D+++ C +C RN V Sbjct: 116 KGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLC------RNRV 169 Query: 243 NLE 235 N+E Sbjct: 170 NIE 172
>ATL2E_ARATH (Q9SJJ7) RING-H2 finger protein ATL2E| Length = 237 Score = 31.2 bits (69), Expect = 1.7 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 C C S+ ++ I CGHVF C D ++++ C +C Sbjct: 140 CVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLC 181
>BRE1_DROME (Q9VRP9) Ubiquitin-protein ligase Bre1 (EC 6.3.2.-) (dBre1)| Length = 1044 Score = 31.2 bits (69), Expect = 1.7 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC-SDKFIATDKVCLMCN 271 + +++ CPSCK + + +S C HVFC C ++ + C CN Sbjct: 983 REYKETLTCPSCKVKRKDAV----LSKCFHVFCYDCLRTRYETRQRKCPKCN 1030
>ZN364_HUMAN (Q9Y4L5) Zinc finger protein 364 (Rabring 7) (RING finger protein| 115) Length = 304 Score = 30.8 bits (68), Expect = 2.2 Identities = 20/79 (25%), Positives = 32/79 (40%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 P +K K+ SL ++ T+E V+ CP CK + T + + C H F Sbjct: 201 PPPADKEKITSLPTVTVTQEQ--------VDMGLECPVCKEDYTVEEEVRQLP-CNHFFH 251 Query: 324 KKCSDKFIATDKVCLMCNK 268 C ++ C +C K Sbjct: 252 SSCIVPWLELHDTCPVCRK 270
>RNF41_BRARE (Q7ZW16) RING finger protein 41| Length = 318 Score = 30.8 bits (68), Expect = 2.2 Identities = 13/45 (28%), Positives = 20/45 (44%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVC 283 V++ +CP C L V C H FC C ++ A ++C Sbjct: 12 VDEDLLCPICSGVLEEP---VRAPHCEHAFCNACITQWFAQQQIC 53
>BRCA1_RAT (O54952) Breast cancer type 1 susceptibility protein homolog| Length = 1817 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERN 250 +++K CP C + +S + C H+FCK C K + K C +C +R+ Sbjct: 17 AMQKILECPICLELIKEPVS----TQCDHIFCKFCMLKLLNQKKGPSQCPLCKNEITKRS 72 Query: 249 L 247 L Sbjct: 73 L 73
>BRCA1_PONPY (Q6J6J0) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERN 250 +++K CP C + +S + C H+FCK C K + K C +C +R+ Sbjct: 17 AMQKILECPICLELIKEPVS----TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 Query: 249 L 247 L Sbjct: 73 L 73
>BRCA1_PANTR (Q9GKK8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERN 250 +++K CP C + +S + C H+FCK C K + K C +C +R+ Sbjct: 17 AMQKILECPICLELIKEPVS----TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 Query: 249 L 247 L Sbjct: 73 L 73
>BRCA1_HUMAN (P38398) Breast cancer type 1 susceptibility protein (RING finger| protein 53) Length = 1863 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERN 250 +++K CP C + +S + C H+FCK C K + K C +C +R+ Sbjct: 17 AMQKILECPICLELIKEPVS----TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 Query: 249 L 247 L Sbjct: 73 L 73
>BRCA1_GORGO (Q6J6I8) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERN 250 +++K CP C + +S + C H+FCK C K + K C +C +R+ Sbjct: 17 AMQKILECPICLELIKEPVS----TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 Query: 249 L 247 L Sbjct: 73 L 73
>RN141_CHICK (Q5ZM74) RING finger protein 141| Length = 230 Score = 30.8 bits (68), Expect = 2.2 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -2 Query: 351 ISTCGHVFCKKCSDKFIATDKVCLMCNK 268 I C H FC+KC DK+ + C +C + Sbjct: 166 ILPCAHSFCQKCIDKWSDRHRSCPVCRR 193
>BRCA1_BOVIN (Q864U1) Breast cancer type 1 susceptibility protein homolog| Length = 1849 Score = 30.8 bits (68), Expect = 2.2 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERN 250 +++K CP C + +S + C H+FCK C K + K C +C +R+ Sbjct: 17 AMQKILECPICLELIKEPVS----TKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRS 72 Query: 249 L 247 L Sbjct: 73 L 73
>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24| Length = 229 Score = 30.8 bits (68), Expect = 2.2 Identities = 18/72 (25%), Positives = 31/72 (43%) Frame = -2 Query: 483 KLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKF 304 KL + + + T+E K + + + C CK T+ + ++ C H FC C K Sbjct: 145 KLNTDWKVDETQEKEVLKELEEIP--FRCFLCKKEYTSPV----VTKCNHYFCSSCFMKQ 198 Query: 303 IATDKVCLMCNK 268 + C +C K Sbjct: 199 MKVSTNCPICGK 210
>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive| photomorphogenesis protein 1) Length = 675 Score = 30.8 bits (68), Expect = 2.2 Identities = 15/59 (25%), Positives = 25/59 (42%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLVN 241 ++K +CP C + + ++ CGH FC C + C PC ++L N Sbjct: 46 LDKDLLCPICMQIIKDAF----LTACGHSFCYMCIITHLRNKSDC-----PCCSQHLTN 95
>ATL1O_ARATH (Q8LFY8) RING-H2 finger protein ATL1O (RING-H2 finger protein| ATL11) Length = 413 Score = 30.8 bits (68), Expect = 2.2 Identities = 12/42 (28%), Positives = 19/42 (45%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 CP C + SL + C H F C D ++++ C +C Sbjct: 177 CPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLC 218
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)| Length = 322 Score = 30.8 bits (68), Expect = 2.2 Identities = 13/62 (20%), Positives = 28/62 (45%) Frame = -2 Query: 450 EENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN 271 E+ + ++ E + C C+ N + ++ C H FC+ C+ + C +C+ Sbjct: 239 EDENHEVGSEEEEIPFRCFICRQAFQNPV----VTKCRHYFCESCALEHFRATPRCYICD 294 Query: 270 KP 265 +P Sbjct: 295 QP 296
>ZN364_MOUSE (Q9D0C1) Zinc finger protein 364 (Rabring 7)| Length = 305 Score = 30.8 bits (68), Expect = 2.2 Identities = 22/79 (27%), Positives = 32/79 (40%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 P +K K+ SL ++ T+E N +E CP CK + T V C H F Sbjct: 202 PPPADKEKITSLPTVTVTQEQV----NTGLE----CPVCKEDYT-VEEKVRQLPCNHFFH 252 Query: 324 KKCSDKFIATDKVCLMCNK 268 C ++ C +C K Sbjct: 253 SSCIVPWLELHDTCPVCRK 271
>TRI48_HUMAN (Q8IWZ4) Tripartite motif protein 48 (RING finger protein 101)| Length = 375 Score = 30.8 bits (68), Expect = 2.2 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 5/61 (8%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC-----SDKFIATDKVCLMCNKPCKERN 250 ++ CP C + + +++ CGH FC+ C D I T C C K ++RN Sbjct: 10 QRELTCPICMNYFIDPVTI----DCGHSFCRPCFYLNWQDIPILTQ--CFECIKTIQQRN 63 Query: 249 L 247 L Sbjct: 64 L 64
>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18| (EC 6.-.-.-) (RAD18 homolog) Length = 387 Score = 30.8 bits (68), Expect = 2.2 Identities = 16/61 (26%), Positives = 25/61 (40%) Frame = -2 Query: 429 SNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERN 250 S K ++ S C C + I++C H FC C ++ +C C P +E Sbjct: 19 SLKGLDSSLRCLICHEYFRAPL----ITSCSHTFCSFCIRDYLREHPMCPACRAPEQESR 74 Query: 249 L 247 L Sbjct: 75 L 75
>ATL3D_ARATH (Q9SRM0) Probable RING-H2 finger protein ATL3D| Length = 158 Score = 30.8 bits (68), Expect = 2.2 Identities = 15/75 (20%), Positives = 31/75 (41%) Frame = -2 Query: 498 GQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKK 319 G + +++SL + E A ++ K C C + + C H + + Sbjct: 80 GLDPAEIRSLPVVLCRRERAEEEEEKE------CCICLGGFEEGEKMKVLPPCSHCYHCE 133 Query: 318 CSDKFIATDKVCLMC 274 C D+++ T+ C +C Sbjct: 134 CVDRWLKTESSCPLC 148
>TFB3_YARLI (Q6C7D0) RNA polymerase II transcription factor B subunit 3 (RNA| polymerase II transcription factor B p38 subunit) (RNA polymerase II transcription factor B 38 kDa subunit) Length = 346 Score = 30.8 bits (68), Expect = 2.2 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%) Frame = -2 Query: 414 EKSYICPSCKSN--LTNTMSLVAISTCGHVFCKKCSDKFIA 298 E ICP CKS+ L M + C H C+ C D+ A Sbjct: 3 EDGDICPICKSSRYLNPDMKFLVNPQCYHKMCESCVDRLFA 43
>ATL4A_ARATH (Q9M0R7) Putative RING-H2 finger protein ATL4A| Length = 132 Score = 30.4 bits (67), Expect = 2.9 Identities = 18/77 (23%), Positives = 31/77 (40%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 P G + +KS +TE + +E C C + + +L + C HVF Sbjct: 54 PRGLDAEAIKSFPSFVYTEARGIEPGIGELE----CVVCLNEFKDDETLRLVPPCVHVFH 109 Query: 324 KKCSDKFIATDKVCLMC 274 C D +++ C +C Sbjct: 110 ADCVDIWLSHSSTCPIC 126
>TRAF6_MOUSE (P70196) TNF receptor-associated factor 6| Length = 530 Score = 30.4 bits (67), Expect = 2.9 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFI 301 +E Y CP C L + + CGH FCK C K I Sbjct: 64 LESKYECPICLMALREAVQ----TPCGHRFCKACIIKSI 98
>ATL5N_ARATH (Q9FHG8) Putative RING-H2 finger protein ATL5N| Length = 210 Score = 30.4 bits (67), Expect = 2.9 Identities = 12/42 (28%), Positives = 18/42 (42%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 C C T L + C H F +C D ++ T+ C +C Sbjct: 122 CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLC 163
>ATL4I_ARATH (O49691) Putative RING-H2 finger protein ATL4I| Length = 289 Score = 30.4 bits (67), Expect = 2.9 Identities = 12/44 (27%), Positives = 21/44 (47%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 C C L ++TC HVF ++C D + + + C +C + Sbjct: 110 CAICLLEFDGDHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRR 153
>TRI39_HUMAN (Q9HCM9) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 518 Score = 30.4 bits (67), Expect = 2.9 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Frame = -2 Query: 426 NKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKF---IATDKVCLMCNKPCKE 256 N VE S C C L + I CGH FCK C ++ + D C +C K + Sbjct: 22 NLQVEAS--CSVCLEYLKEPV----IIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY 75 Query: 255 RNL 247 R+L Sbjct: 76 RSL 78
>RN141_RAT (Q6IV57) RING finger protein 141| Length = 230 Score = 30.4 bits (67), Expect = 2.9 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = -2 Query: 438 RQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 R K E+ IC +++L I C H FC+KC DK+ + C +C Sbjct: 145 RVKQLTDEEECCICMDGRADL--------ILPCAHSFCQKCIDKWSDRHRNCPIC 191
>RN141_PONPY (Q5R7K8) RING finger protein 141| Length = 230 Score = 30.4 bits (67), Expect = 2.9 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = -2 Query: 438 RQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 R K E+ IC +++L I C H FC+KC DK+ + C +C Sbjct: 145 RVKQLTDEEECCICMDGRADL--------ILPCAHSFCQKCIDKWSDRHRNCPIC 191
>RN141_MOUSE (Q99MB7) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 30.4 bits (67), Expect = 2.9 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = -2 Query: 438 RQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 R K E+ IC +++L I C H FC+KC DK+ + C +C Sbjct: 145 RVKQLTDEEECCICMDGRADL--------ILPCAHSFCQKCIDKWSDRHRNCPIC 191
>RN141_HUMAN (Q8WVD5) RING finger protein 141 (Zinc finger protein 230)| Length = 230 Score = 30.4 bits (67), Expect = 2.9 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = -2 Query: 438 RQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 R K E+ IC +++L I C H FC+KC DK+ + C +C Sbjct: 145 RVKQLTDEEECCICMDGRADL--------ILPCAHSFCQKCIDKWSDRHRNCPIC 191
>PEX10_MACFA (Q8HXW8) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) Length = 326 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/62 (20%), Positives = 30/62 (48%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLV 244 ++V ++ +C C + + + CGH+FC +C + ++ C +C + + L+ Sbjct: 265 RAVSRNPLCTLCLEERRHPTA----TPCGHLFCWECITAWCSSKAECPLCREKFPPQKLI 320 Query: 243 NL 238 L Sbjct: 321 YL 322
>PEX10_HUMAN (O60683) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (RING finger protein 69) Length = 326 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/62 (20%), Positives = 30/62 (48%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLV 244 ++V ++ +C C + + + CGH+FC +C + ++ C +C + + L+ Sbjct: 265 RAVSRNPLCTLCLEERRHPTA----TPCGHLFCWECITAWCSSKAECPLCREKFPPQKLI 320 Query: 243 NL 238 L Sbjct: 321 YL 322
>DIAP3_HUMAN (Q9NSV4) Protein diaphanous homolog 3 (Diaphanous-related formin-3)| (DRF3) Length = 1110 Score = 30.4 bits (67), Expect = 2.9 Identities = 22/59 (37%), Positives = 29/59 (49%) Frame = +2 Query: 140 GFTNPRPEPLPKCLKFFASRWSSCAAKPVPPFSKLTKFLSLHGLLHIKQTLSVAMNLSE 316 G RP PLP FAS S C+A P+ K LS + LL + + + MNL+E Sbjct: 82 GSKKERP-PLPNLKTAFAS--SDCSAAPLEMMENFPKPLSENELLELFEKMMEDMNLNE 137
>ATL5I_ARATH (Q9FL07) RING-H2 finger protein ATL5I| Length = 376 Score = 30.4 bits (67), Expect = 2.9 Identities = 11/51 (21%), Positives = 22/51 (43%) Frame = -2 Query: 426 NKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 N + ++ + C C + L + C H F C D ++ ++ C +C Sbjct: 134 NGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLC 184
>ATL1R_ARATH (Q8LC69) RING-H2 finger protein ATL1R (RING-H2 finger protein ATL8)| Length = 185 Score = 30.4 bits (67), Expect = 2.9 Identities = 18/78 (23%), Positives = 33/78 (42%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCK 322 +G +K L+SL ++++ ++ EK C C + L + CGH F Sbjct: 76 KGLKKKVLRSLPKLTYSPDSP------PAEKLVECAICLTEFAAGDELRVLPQCGHGFHV 129 Query: 321 KCSDKFIATDKVCLMCNK 268 C D ++ + C C + Sbjct: 130 SCIDTWLGSHSSCPSCRQ 147
>ARI1_MOUSE (Q9Z1K5) Protein ariadne-1 homolog (ARI-1) (Ubiquitin-conjugating| enzyme E2-binding protein 1) (UbcH7-binding protein) (UbcM4-interacting protein 77) Length = 555 Score = 30.4 bits (67), Expect = 2.9 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = -2 Query: 450 EENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT 295 + RQ + +S + C C N N S CGH FC +C +++ T Sbjct: 167 KSRTRQMNTRSSAQDMPCQICYLNYPN--SYFTGLECGHKFCMQCWSEYLTT 216
>TRI54_BOVIN (Q58D15) Tripartite motif protein 54| Length = 366 Score = 30.4 bits (67), Expect = 2.9 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = -2 Query: 468 FPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD 310 F + F S ++EK ICP C + V I C H C+KC++ Sbjct: 3 FTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKP---VVILPCQHNLCRKCAN 52
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 30.4 bits (67), Expect = 2.9 Identities = 12/42 (28%), Positives = 20/42 (47%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 C CK L + ++ CGH FC C +++ + C +C Sbjct: 32 CHICKDMLQTPV----LTQCGHTFCSLCIREYLNKESRCPLC 69
>R126B_XENLA (Q6IRP0) RING finger protein 126-B| Length = 312 Score = 30.4 bits (67), Expect = 2.9 Identities = 23/87 (26%), Positives = 35/87 (40%) Frame = -2 Query: 483 KLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKF 304 K+++L I TEE+ V CP CK + T S+ + C H+F C + Sbjct: 208 KIQALPTIQITEEH--------VGFGLECPVCKEDYTVGESVRQLP-CNHLFHNDCIIPW 258 Query: 303 IATDKVCLMCNKPCKERNLVNLEKGGT 223 + C +C K +N G T Sbjct: 259 LEQHDTCPVCRKSLSGQNTATNPPGLT 285
>BRCA1_CANFA (Q95153) Breast cancer type 1 susceptibility protein homolog| Length = 1878 Score = 30.4 bits (67), Expect = 2.9 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERN 250 +++K CP C + +S + C H+FCK C K + K C +C +R+ Sbjct: 17 AMQKILECPICLELIKEPVS----TKCDHIFCKFCMLKLLNQRKGPSQCPLCKNDITKRS 72 Query: 249 L 247 L Sbjct: 73 L 73
>TRI54_PONPY (Q5REJ9) Tripartite motif protein 54| Length = 358 Score = 30.4 bits (67), Expect = 2.9 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = -2 Query: 468 FPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD 310 F + F S ++EK ICP C + V I C H C+KC++ Sbjct: 3 FTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKP---VVILPCQHNLCRKCAN 52
>TRI54_HUMAN (Q9BYV2) Tripartite motif protein 54 (Muscle-specific RING finger| protein 3) (MuRF3) (MURF-3) (Muscle-specific RING finger protein) (MuRF) (RING finger protein 30) Length = 358 Score = 30.4 bits (67), Expect = 2.9 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = -2 Query: 468 FPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD 310 F + F S ++EK ICP C + V I C H C+KC++ Sbjct: 3 FTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKP---VVILPCQHNLCRKCAN 52
>ATL1D_ARATH (Q8GW38) RING-H2 finger protein ATL1D| Length = 369 Score = 30.4 bits (67), Expect = 2.9 Identities = 12/53 (22%), Positives = 22/53 (41%) Frame = -2 Query: 432 KSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 K K ++ + C C + L + C H F C D ++ ++ C +C Sbjct: 133 KEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLC 185
>TRI39_RAT (Q6MFZ5) Tripartite motif protein 39 (RING finger protein 23)| Length = 488 Score = 30.4 bits (67), Expect = 2.9 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Frame = -2 Query: 426 NKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKF---IATDKVCLMCNKPCKE 256 N VE S C C L + I CGH FCK C ++ + D C +C K + Sbjct: 22 NLQVEAS--CSVCLEYLKEPV----IIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY 75 Query: 255 RNL 247 R+L Sbjct: 76 RSL 78
>TRI39_MOUSE (Q9ESN2) Tripartite motif protein 39 (RING finger protein 23)| (Testis-abundant finger protein) Length = 488 Score = 30.4 bits (67), Expect = 2.9 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Frame = -2 Query: 426 NKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKF---IATDKVCLMCNKPCKE 256 N VE S C C L + I CGH FCK C ++ + D C +C K + Sbjct: 22 NLQVEAS--CSVCLEYLKEPV----IIECGHNFCKACITRWWEDLERDFPCPVCRKTSRY 75 Query: 255 RNL 247 R+L Sbjct: 76 RSL 78
>TRAF6_HUMAN (Q9Y4K3) TNF receptor-associated factor 6 (Interleukin 1 signal| transducer) (RING finger protein 85) Length = 522 Score = 30.4 bits (67), Expect = 2.9 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFI 301 +E Y CP C L + + CGH FCK C K I Sbjct: 64 LESKYECPICLMALREAVQ----TPCGHRFCKACIIKSI 98
>TRI12_MOUSE (Q99PQ1) Tripartite motif protein 12| Length = 284 Score = 30.4 bits (67), Expect = 2.9 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = -2 Query: 423 KSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKF---IATDKVCLMC 274 K++++ CP C + + +S + CGH FC+ C + I DK +C Sbjct: 7 KNLKEEVTCPVCLNLMVKPVS----ADCGHTFCQGCITLYFESIKCDKKVFIC 55
>TRI10_PANTR (Q7YR32) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 7/52 (13%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKF-------IATDKVCLMCNKP 265 CP C+ L +++ CGH FC+ C ++ + C +C +P Sbjct: 16 CPICQGTLREPVTI----DCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEP 63
>TRI10_HUMAN (Q9UDY6) Tripartite motif protein 10 (RING finger protein 9)| (B30-RING finger protein) Length = 481 Score = 30.4 bits (67), Expect = 2.9 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 7/52 (13%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKF-------IATDKVCLMCNKP 265 CP C+ L +++ CGH FC+ C ++ + C +C +P Sbjct: 16 CPICQGTLREPVTI----DCGHNFCRACLTRYCEIPGPDLEESPTCPLCKEP 63
>ARI1_HUMAN (Q9Y4X5) Protein ariadne-1 homolog (ARI-1) (Ubiquitin-conjugating| enzyme E2-binding protein 1) (UbcH7-binding protein) (UbcM4-interacting protein) (HHARI) (H7-AP2) (MOP-6) Length = 557 Score = 30.4 bits (67), Expect = 2.9 Identities = 15/52 (28%), Positives = 23/52 (44%) Frame = -2 Query: 450 EENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIAT 295 + RQ + +S + C C N N S CGH FC +C +++ T Sbjct: 169 KSRTRQMNTRSSAQDMPCQICYLNYPN--SYFTGLECGHKFCMQCWSEYLTT 218
>RHA1B_ARATH (Q9SUS5) RING-H2 zinc finger protein RHA1b| Length = 157 Score = 30.0 bits (66), Expect = 3.7 Identities = 14/44 (31%), Positives = 21/44 (47%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 C C S+ + + + CGHVF +C D++I CNK Sbjct: 85 CTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVD------CNK 122
>TFB3_ASHGO (Q75D20) RNA polymerase II transcription factor B subunit 3 (RNA| polymerase II transcription factor B p38 subunit) (RNA polymerase II transcription factor B 38 kDa subunit) Length = 318 Score = 30.0 bits (66), Expect = 3.7 Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Frame = -2 Query: 414 EKSYICPSCKSN--LTNTMSLVAISTCGHVFCKKCSDKFIA 298 EK +CP CK++ L+ M + C H C+ C D+ + Sbjct: 5 EKKDMCPICKTDRYLSPDMKFLVNPECYHKICESCVDRIFS 45
>RNF6_HUMAN (Q9Y252) RING finger protein 6 (RING-H2 protein)| Length = 685 Score = 30.0 bits (66), Expect = 3.7 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Frame = -2 Query: 501 EGQEKLKLKSLFPISFTEENARQKSNKSVEKSY--ICPSCKSNLTNTMSLVAISTCGHVF 328 E + +++ L + R + S++ IC C S+ L + C H F Sbjct: 596 ESDDDDRIRGLTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLP-CMHEF 654 Query: 327 CKKCSDKFIATDKVCLMCNKPCKERNLVN 241 C D++++ + C +C +P N+ N Sbjct: 655 HIHCIDRWLSENCTCPICRQPVLGSNIAN 683
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 30.0 bits (66), Expect = 3.7 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 399 CPSCKSNLTN-TMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKP 265 CP C + +N +M+L C H FC C ++I + C +C P Sbjct: 8 CPICLEDPSNYSMAL----PCLHAFCYVCITRWIRQNPTCPLCKVP 49
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 30.0 bits (66), Expect = 3.7 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%) Frame = -2 Query: 399 CPSCKSNLTN-TMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKP 265 CP C + +N +M+L C H FC C ++I + C +C P Sbjct: 8 CPICLEDPSNYSMAL----PCLHAFCYVCITRWIRQNPTCPLCKVP 49
>RN126_HUMAN (Q9BV68) RING finger protein 126| Length = 326 Score = 30.0 bits (66), Expect = 3.7 Identities = 24/95 (25%), Positives = 36/95 (37%) Frame = -2 Query: 504 PEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFC 325 P +K K+++L + TEE+ V CP CK + V C H+F Sbjct: 202 PPPADKEKIQALPTVPVTEEH--------VGSGLECPVCKDDYA-LGERVRQLPCNHLFH 252 Query: 324 KKCSDKFIATDKVCLMCNKPCKERNLVNLEKGGTG 220 C ++ C +C K +N G TG Sbjct: 253 DGCIVPWLEQHDSCPVCRKSLTGQNTATNPPGLTG 287
>ATL2C_ARATH (Q9ZV53) Putative RING-H2 finger protein ATL2C| Length = 423 Score = 30.0 bits (66), Expect = 3.7 Identities = 16/64 (25%), Positives = 26/64 (40%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLVNLEKGGTG 220 CP C L + C H F +C D ++ + C +C NL+ +G Sbjct: 126 CPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRS-----NLL------SG 174 Query: 219 FAAH 208 F++H Sbjct: 175 FSSH 178
>RHA1A_ARATH (Q9SUS4) RING-H2 zinc finger protein RHA1a| Length = 159 Score = 30.0 bits (66), Expect = 3.7 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 2/74 (2%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIA--TDKVCLMCNKPCKERNLVNLEKGG 226 C C S+ + + + CGHVF C D++I C +C + G Sbjct: 86 CTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMKCPVCRHRFLPKEKYTQSDWG 145 Query: 225 TGFAAHDDHLEAKN 184 +G D +E+ N Sbjct: 146 SGSDWFSDEVESTN 159
>ZN313_RAT (Q6J2U6) Zinc finger protein 313| Length = 229 Score = 30.0 bits (66), Expect = 3.7 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = -2 Query: 447 ENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK-VCLMC 274 ++A+ S + CP C + + CGHVFC C + + K VC +C Sbjct: 14 QSAKPASETDPLSRFTCPVCLEVFEKPVQV----PCGHVFCSACLQECLKPKKPVCGVC 68
>ZN313_MOUSE (Q9ET26) Zinc finger protein 313| Length = 229 Score = 30.0 bits (66), Expect = 3.7 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%) Frame = -2 Query: 447 ENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK-VCLMC 274 ++A+ S + CP C + + CGHVFC C + + K VC +C Sbjct: 14 QSAKPASETDPLSRFTCPVCLEVFEKPVQV----PCGHVFCSACLQECLKPKKPVCGVC 68
>CM007_MOUSE (Q8K2Y0) Protein C13orf7 homolog| Length = 722 Score = 30.0 bits (66), Expect = 3.7 Identities = 14/43 (32%), Positives = 18/43 (41%) Frame = -2 Query: 351 ISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLVNLEKGGT 223 + T HVFC C D ++ + C C P N GGT Sbjct: 30 VCTNNHVFCSICIDLWLKNNSQCPACRVPITPENPCKEIIGGT 72
>ATL3B_ARATH (Q8RXX9) RING-H2 finger protein ATL3B precursor (RING-H2 finger| protein ATL6) Length = 398 Score = 30.0 bits (66), Expect = 3.7 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 2/72 (2%) Frame = -2 Query: 432 KSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKER 253 K+ K + C C + + +L + C HVF C D ++ C +C E+ Sbjct: 117 KTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQ 176 Query: 252 --NLVNLEKGGT 223 ++E GGT Sbjct: 177 VAEGESVEPGGT 188
>TRIM2_MOUSE (Q9ESN6) Tripartite motif protein 2 (Neural activity-related RING| finger protein) Length = 744 Score = 30.0 bits (66), Expect = 3.7 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = -2 Query: 423 KSVEKSY-ICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNL 247 + ++K + IC C N L C H FC++C +I + L C C++ ++ Sbjct: 14 RQIDKQFLICSICLERYKNPKVL----PCLHTFCERCLQNYIPAHSLTLSC-PVCRQTSI 68 Query: 246 VNLEKG 229 + EKG Sbjct: 69 LP-EKG 73
>TRIM2_HUMAN (Q9C040) Tripartite motif protein 2 (RING finger protein 86)| Length = 744 Score = 30.0 bits (66), Expect = 3.7 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = -2 Query: 423 KSVEKSY-ICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNL 247 + ++K + IC C N L C H FC++C +I + L C C++ ++ Sbjct: 14 RQIDKQFLICSICLERYKNPKVL----PCLHTFCERCLQNYIPAHSLTLSC-PVCRQTSI 68 Query: 246 VNLEKG 229 + EKG Sbjct: 69 LP-EKG 73
>ATL4E_ARATH (Q9SN28) RING-H2 finger protein ATL4E| Length = 236 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/48 (25%), Positives = 21/48 (43%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 + K C C + L + +CGH F +C D ++ + C +C Sbjct: 105 IVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLC 152
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 30.0 bits (66), Expect = 3.7 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 7/80 (8%) Frame = -2 Query: 450 EENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN 271 E+ + + E + C C+ + N + ++ C H FC+ C+ + T C +C+ Sbjct: 245 EDENYEVGSDDEEIPFKCFICRQSFQNPV----VTKCRHYFCESCALQHFRTTPRCYVCD 300 Query: 270 K-------PCKERNLVNLEK 232 + P KE + LEK Sbjct: 301 QQTNGVFNPAKEL-IAKLEK 319
>POL_RTBVP (P27502) Polyprotein (P194 protein) [Contains: Coat protein; Protease| (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] Length = 1675 Score = 30.0 bits (66), Expect = 3.7 Identities = 17/58 (29%), Positives = 26/58 (44%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNLVN 241 +K +C C S T+ V+ TC +CK CSD+ KP KE +++ Sbjct: 846 KKDKVCEIC-SYFTDYNKTVSCKTCETQYCKTCSDQLALE---VTEVKKPTKEETMID 899
>PEX10_PICPA (Q92265) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome| biogenesis factor 10) (Peroxisome assembly protein PAS7) Length = 419 Score = 30.0 bits (66), Expect = 3.7 Identities = 17/55 (30%), Positives = 22/55 (40%) Frame = -2 Query: 414 EKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERN 250 E S C C S +TN + + CGH FC C + + L K C N Sbjct: 293 ESSRQCMLCLSYMTNPTA----ANCGHCFCWSCIIDWCKERQTVLCVGKKCWNSN 343
>GOLI_HUMAN (Q86XS8) Goliath homolog precursor (RING finger protein 130)| Length = 419 Score = 30.0 bits (66), Expect = 3.7 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 12/55 (21%) Frame = -2 Query: 360 LVAISTCGHVFCKKCSDKFIATDKVCLMC------------NKPCKERNLVNLEK 232 +V I C HVF K C D +++ C MC N PC + ++E+ Sbjct: 276 VVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMER 330
>ATL2K_ARATH (Q9SLC4) RING-H2 finger protein ATL2K| Length = 217 Score = 30.0 bits (66), Expect = 3.7 Identities = 13/42 (30%), Positives = 18/42 (42%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 C C S L + + C HVF C D ++ T C +C Sbjct: 100 CAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVC 141
>TIF1G_HUMAN (Q9UPN9) Transcription intermediary factor 1-gamma (TIF1-gamma)| (RET-fused gene 7 protein) (Rfg7 protein) (Tripartite motif protein 33) Length = 1127 Score = 29.6 bits (65), Expect = 4.9 Identities = 15/64 (23%), Positives = 27/64 (42%) Frame = -2 Query: 507 CPEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVF 328 CP +++ + L F ++ + S+ + +C SC+ N + V CG Sbjct: 181 CPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNASAVGFCV---ECGEWL 237 Query: 327 CKKC 316 CK C Sbjct: 238 CKTC 241
>BRCA1_MACMU (Q6J6I9) Breast cancer type 1 susceptibility protein homolog| Length = 1863 Score = 29.6 bits (65), Expect = 4.9 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERN 250 +++K CP C + +S + C H+FC+ C K + K C +C +R+ Sbjct: 17 AMQKILECPICLELIKEPVS----TKCDHIFCRFCMLKLLNQKKGPSQCPLCKNDITKRS 72 Query: 249 L 247 L Sbjct: 73 L 73
>TIF1G_MOUSE (Q99PP7) Transcription intermediary factor 1-gamma (TIF1-gamma)| (Tripartite motif protein 33) Length = 1142 Score = 29.6 bits (65), Expect = 4.9 Identities = 15/64 (23%), Positives = 27/64 (42%) Frame = -2 Query: 507 CPEGQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVF 328 CP +++ + L F ++ + S+ + +C SC+ N + V CG Sbjct: 197 CPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDNASAVGFCV---ECGEWL 253 Query: 327 CKKC 316 CK C Sbjct: 254 CKTC 257
>ATL4B_ARATH (Q9M0R6) Putative RING-H2 finger protein ATL4B precursor| Length = 302 Score = 29.6 bits (65), Expect = 4.9 Identities = 21/75 (28%), Positives = 31/75 (41%) Frame = -2 Query: 498 GQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKK 319 G EK ++S FPI E K K + C C S + +L + C H F Sbjct: 94 GLEKELVES-FPIFLYSEVKGLKIGKGGVE---CAICLSEFVDKETLRWMPPCSHTFHAN 149 Query: 318 CSDKFIATDKVCLMC 274 C D ++++ C C Sbjct: 150 CIDVWLSSQSTCPAC 164
>PCGF6_RAT (Q5XI70) Polycomb group RING finger protein 6 (RING finger protein| 134) Length = 351 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/44 (31%), Positives = 19/44 (43%) Frame = -2 Query: 402 ICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN 271 +C CK L + + I+ C H FCK C + C CN Sbjct: 134 LCSICKGYLIDATT---ITECLHTFCKSCIVRHFYYSNRCPKCN 174
>ATL5M_ARATH (Q9FGJ6) RING-H2 finger protein ATL5M precursor| Length = 166 Score = 29.6 bits (65), Expect = 4.9 Identities = 13/42 (30%), Positives = 18/42 (42%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 C C S S+ + C H F KC K+++T C C Sbjct: 107 CAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTC 148
>RNF8_HUMAN (O76064) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger| protein 8) Length = 485 Score = 29.6 bits (65), Expect = 4.9 Identities = 15/66 (22%), Positives = 25/66 (37%) Frame = -2 Query: 450 EENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN 271 +E N +E C C ++L C H FC C ++++ C +C Sbjct: 386 KEEVLSHMNDVLENELQCIICSEYFIEAVTL----NCAHSFCSYCINEWMKRKIECPICR 441 Query: 270 KPCKER 253 K K + Sbjct: 442 KDIKSK 447
>RAD18_CANAL (Q5A4N5) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 378 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/57 (24%), Positives = 23/57 (40%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKPCKERNL 247 +++ YIC + T C H +C +C +F+ D C +C E L Sbjct: 26 LKRCYICKDLLNAPVRTQ-------CDHTYCSQCIREFLLRDNRCPLCKTEVFESGL 75
>TRAF7_MOUSE (Q922B6) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) Length = 594 Score = 29.6 bits (65), Expect = 4.9 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Frame = -2 Query: 495 QEKLKLKSLFPISFTEEN------ARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGH 334 + + L+S F + EE A Q S K C C S + + I+TCGH Sbjct: 22 ESSMSLRSTFSLPEEEEEPEPLVFAEQPSVK-----LCCQLCCSVFKDPV----ITTCGH 72 Query: 333 VFCKKCSDK 307 FC++C+ K Sbjct: 73 TFCRRCALK 81
>SRCH_RABIT (P16230) Sarcoplasmic reticulum histidine-rich calcium-binding| protein precursor Length = 852 Score = 29.6 bits (65), Expect = 4.9 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 9/60 (15%) Frame = -1 Query: 499 GAGEAQAEITLPYFFH*---------GERSSEEQ*VSGEKLHLPQLQVQSHKHNVPGGDQ 347 G G+ +AE+T H G++ EE+ VS + H QV H H+ PGG++ Sbjct: 508 GHGKEEAEVTSDEHHHHVPDHGHQGHGDKEGEEEGVSTDHWH----QVPRHAHHGPGGEE 563
>RBX1_SCHPO (O13959) RING-box protein pip1 (Pop-interacting protein 1)| (RING-box protein 1) Length = 107 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -2 Query: 402 ICPSCKSNLTNTMS---LVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 +C C++N + + VA TC H F C +++ T VC + N+ Sbjct: 51 LCIECQANTDSAAAQECTVAWGTCNHAFHFHCISRWLNTRNVCPLDNR 98
>PCGF6_MOUSE (Q99NA9) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 353 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/44 (31%), Positives = 19/44 (43%) Frame = -2 Query: 402 ICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCN 271 +C CK L + + I+ C H FCK C + C CN Sbjct: 136 LCSICKGYLIDATT---ITECLHTFCKSCIVRHFYYSNRCPKCN 176
>TRIM6_HUMAN (Q9C030) Tripartite motif protein 6 (RING finger protein 89)| Length = 488 Score = 29.6 bits (65), Expect = 4.9 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -2 Query: 417 VEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKC 316 + + CP C LT +S+ CGH FC+ C Sbjct: 9 IREEVTCPICLELLTEPLSI----DCGHSFCQAC 38
>CWC24_ASPFU (Q4WUA0) Pre-mRNA-splicing factor cwc24| Length = 339 Score = 29.6 bits (65), Expect = 4.9 Identities = 12/44 (27%), Positives = 22/44 (50%) Frame = -2 Query: 405 YICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 + C CKS+ + + ++ CGH FC+ C+ + + C C Sbjct: 251 FACIICKSSYKSPI----VTKCGHYFCESCALQRYRKNPSCAAC 290
>ATL4C_ARATH (Q9M0R5) Putative RING-H2 finger protein ATL4C precursor| Length = 345 Score = 29.6 bits (65), Expect = 4.9 Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 7/122 (5%) Frame = -2 Query: 498 GQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKK 319 G EK ++S ++E + VE C C S + +L + C H F Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVE----CAICLSEFEDQETLRWMPPCSHTFHAN 149 Query: 318 CSDKFIATDKVCLMCN-----KPCKERNLVNL--EKGGTGFAAHDDHLEAKNFKHLGSGS 160 C D ++++ C +C KP + +N+ E GG ++ L + + Sbjct: 150 CIDVWLSSWSTCPVCRANLSLKPGESYPYLNMDVETGGVQKLPNERSLTGNSVTTRSRST 209 Query: 159 GL 154 GL Sbjct: 210 GL 211
>RBX1_SALSA (Q8QG64) RING-box protein 1 (Rbx1) (Hyperosmotic protein 21)| Length = 108 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -2 Query: 402 ICPSCKSNLTNTMS---LVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 +C C++N + S VA C H F C +++ T +VC + N+ Sbjct: 52 LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 99
>RBX1_MOUSE (P62878) RING-box protein 1 (Rbx1)| Length = 108 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -2 Query: 402 ICPSCKSNLTNTMS---LVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 +C C++N + S VA C H F C +++ T +VC + N+ Sbjct: 52 LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 99
>RBX1_HUMAN (P62877) RING-box protein 1 (Rbx1) (Regulator of cullins 1) (RING| finger protein 75) (ZYP protein) Length = 108 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -2 Query: 402 ICPSCKSNLTNTMS---LVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 +C C++N + S VA C H F C +++ T +VC + N+ Sbjct: 52 LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 99
>RBX1A_DROME (Q9W5E1) RING-box protein 1A (Regulator of cullins 1a) (dRbx1)| Length = 108 Score = 29.6 bits (65), Expect = 4.9 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = -2 Query: 402 ICPSCKSNLTNTMS---LVAISTCGHVFCKKCSDKFIATDKVCLMCNK 268 +C C++N + S VA C H F C +++ T +VC + N+ Sbjct: 52 LCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 99
>GOLI_RAT (Q6Y290) Goliath homolog precursor (RING finger protein 130)| (R-goliath) Length = 419 Score = 29.6 bits (65), Expect = 4.9 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 12/55 (21%) Frame = -2 Query: 360 LVAISTCGHVFCKKCSDKFIATDKVCLMC------------NKPCKERNLVNLEK 232 +V + C HVF K C D +++ C MC N PC + ++E+ Sbjct: 276 VVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMER 330
>GOLI_MOUSE (Q8VEM1) Goliath homolog precursor (RING finger protein 130)| (G1-related zinc finger protein) Length = 419 Score = 29.6 bits (65), Expect = 4.9 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 12/55 (21%) Frame = -2 Query: 360 LVAISTCGHVFCKKCSDKFIATDKVCLMC------------NKPCKERNLVNLEK 232 +V + C HVF K C D +++ C MC N PC + ++E+ Sbjct: 276 VVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMER 330
>ATL4F_ARATH (Q9SN27) RING-H2 finger protein ATL4F| Length = 225 Score = 29.6 bits (65), Expect = 4.9 Identities = 11/42 (26%), Positives = 19/42 (45%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 C C + L + +CGH F +C D ++ + C +C Sbjct: 97 CSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLC 138
>ATL4D_ARATH (Q9M0R4) Putative RING-H2 finger protein ATL4D precursor| Length = 357 Score = 29.6 bits (65), Expect = 4.9 Identities = 18/75 (24%), Positives = 32/75 (42%) Frame = -2 Query: 498 GQEKLKLKSLFPISFTEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKK 319 G +K ++S ++E A + N VE C C + L + C H F Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVE----CAICLCEFEDEEPLRWMPPCSHTFHAN 146 Query: 318 CSDKFIATDKVCLMC 274 C D+++++ C +C Sbjct: 147 CIDEWLSSRSTCPVC 161
>TRAF7_HUMAN (Q6Q0C0) E3 ubiquitin protein ligase TRAF7 (EC 6.3.2.-) (TNF| receptor-associated factor 7) (Ring finger and WD repeat domain 1) (RING finger protein 119) Length = 670 Score = 29.6 bits (65), Expect = 4.9 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Frame = -2 Query: 495 QEKLKLKSLFPISFTEEN------ARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGH 334 + + L+S F + EE A Q S K C C S + + I+TCGH Sbjct: 98 ESSMSLRSTFSLPEEEEEPEPLVFAEQPSVK-----LCCQLCCSVFKDPV----ITTCGH 148 Query: 333 VFCKKCSDK 307 FC++C+ K Sbjct: 149 TFCRRCALK 157
>TOPRS_MOUSE (Q80Z37) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1033 Score = 29.3 bits (64), Expect = 6.4 Identities = 13/45 (28%), Positives = 18/45 (40%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKP 265 CP C N L C H FC +C ++ C +C +P Sbjct: 104 CPICLDRFDNVSYL---DRCLHKFCFRCVQEWSKNKAECPLCKQP 145
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 29.3 bits (64), Expect = 6.4 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 +V IC C+ L N ++V C H FC C + ++ C C Sbjct: 256 AVNPHIICHLCQGYLINATTIVE---CLHSFCHSCLINHLRKERFCPRC 301
>EL5_ORYSA (Q9LRB7) E3 ubiquitin ligase EL5 (EC 6.3.2.-)| Length = 325 Score = 29.3 bits (64), Expect = 6.4 Identities = 13/60 (21%), Positives = 25/60 (41%) Frame = -2 Query: 453 TEENARQKSNKSVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 T A ++ + + C C + L + + CGH F +C D ++ + C +C Sbjct: 116 TAAAAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLC 175
>TRI54_RAT (Q5XIH6) Tripartite motif protein 54 (RING finger protein 30)| Length = 364 Score = 29.3 bits (64), Expect = 6.4 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD 310 ++EK ICP C + V I C H C+KC++ Sbjct: 19 NLEKQLICPICLEMFSKP---VVILPCQHNLCRKCAN 52
>ATL5E_ARATH (Q9FL42) Putative RING-H2 finger protein ATL5E| Length = 159 Score = 29.3 bits (64), Expect = 6.4 Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 1/50 (2%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC-NKPCKER 253 C C + + I C H F C D+++ T C +C N P R Sbjct: 94 CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSR 143
>TOPRS_HUMAN (Q9NS56) Ubiquitin-protein E3 ligase Topors (EC 6.3.2.-)| (SUMO1-protein E3 ligase Topors) (Topoisomerase I-binding RING finger protein) (Topoisomerase I-binding arginine/serine-rich protein) (Tumor suppressor p53-binding protein 3) (p53-bindi Length = 1045 Score = 29.3 bits (64), Expect = 6.4 Identities = 13/45 (28%), Positives = 18/45 (40%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMCNKP 265 CP C N L C H FC +C ++ C +C +P Sbjct: 103 CPICLDRFDNVSYL---DRCLHKFCFRCVQEWSKNKAECPLCKQP 144
>YEEA_SCHPO (O13826) Hypothetical RING finger protein C19A8.10 in chromosome I| Length = 254 Score = 29.3 bits (64), Expect = 6.4 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 4/42 (9%) Frame = -2 Query: 402 ICPSCKSNL----TNTMSLVAISTCGHVFCKKCSDKFIATDK 289 +CP C+ L + S + + CGHV+C C+ K + T K Sbjct: 188 VCPRCQEPLGTSKSKEKSALWATKCGHVYCGSCA-KVLKTSK 228
>TRI54_MOUSE (Q9ERP3) Tripartite motif protein 54 (Muscle-specific RING finger| protein 3) (MuRF3) (MURF-3) (Muscle-specific RING finger protein) (MuRF) (RING finger protein 30) Length = 366 Score = 29.3 bits (64), Expect = 6.4 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = -2 Query: 420 SVEKSYICPSCKSNLTNTMSLVAISTCGHVFCKKCSD 310 ++EK ICP C + V I C H C+KC++ Sbjct: 19 NLEKQLICPICLEMFSKP---VVILPCQHNLCRKCAN 52
>SMRA3_MOUSE (Q6PCN7) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (TNF-response element-binding protein) (P113) Length = 1003 Score = 29.3 bits (64), Expect = 6.4 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERNLV 244 C C +LT I+ C HVFCK C + I +++ C +C NL+ Sbjct: 754 CAICLDSLT----FPVITHCAHVFCKPCICQVIHSEQPHAKCPLCRNEIHGDNLL 804
>ATL2H_ARATH (Q6NKR1) RING-H2 finger protein ATL2H| Length = 254 Score = 29.3 bits (64), Expect = 6.4 Identities = 12/42 (28%), Positives = 19/42 (45%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDKVCLMC 274 C C S ++ ++ I+ C H F C D + K C +C Sbjct: 103 CAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVC 144
>SMRA3_RABIT (Q95216) SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3 (EC 3.6.1.-) (Sucrose nonfermenting protein 2-like 3) (RUSH-1) Length = 1005 Score = 29.3 bits (64), Expect = 6.4 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 3/55 (5%) Frame = -2 Query: 399 CPSCKSNLTNTMSLVAISTCGHVFCKKCSDKFIATDK---VCLMCNKPCKERNLV 244 C C +LT + I+ C HVFCK C + I ++ C +C NL+ Sbjct: 757 CAICLDSLT----VPVITHCAHVFCKPCICQCIQNEQPHAKCPLCRNDIHGDNLL 807 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,507,708 Number of Sequences: 219361 Number of extensions: 1427877 Number of successful extensions: 4567 Number of sequences better than 10.0: 292 Number of HSP's better than 10.0 without gapping: 4313 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4539 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
