ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart19a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
2dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D... 109 8e-21
3gb|AY109899.1| Zea mays CL54750_1 mRNA sequence 52 0.002
4gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 46 0.099
5gb|AC140455.2| Mus musculus BAC clone RP23-24B2 from chromosome ... 46 0.099
6gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosom... 46 0.099
7emb|Z99105.2|BSUB0002 Bacillus subtilis complete genome (section... 46 0.099
8emb|X77636.1|BSPAAT B.subtilis putative amino acid transporter gene 46 0.099
9emb|X70356.1|BSSRFAP B.subtilis srfA-sfp gene region for surfact... 46 0.099
10gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 46 0.099
11dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 46 0.099
12dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 46 0.099
13gb|L17438.1|BACSFPO Bacillus subtilis surfactin (sfpo) gene, com... 46 0.099
14dbj|D50453.1| Bacillus subtilis DNA for 25-36 degree region cont... 46 0.099
15ref|XM_508594.1| PREDICTED: Pan troglodytes similar to KIAA1394 ... 44 0.39
16ref|XM_462875.1| Oryza sativa (japonica cultivar-group), predic... 44 0.39
17ref|XM_361022.1| Magnaporthe grisea 70-15 hypothetical protein (... 44 0.39
18gb|AY657549.1| Synthetic construct Peudomonas aeruginosa clone F... 44 0.39
19emb|AJ010321.1|CAJ10321 Caulobacter crescentus partial tig gene ... 44 0.39
20gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 0.39
21dbj|AK127616.1| Homo sapiens cDNA FLJ45714 fis, clone FEKID20026... 44 0.39
22gb|AE005869.1| Caulobacter crescentus CB15 section 195 of 359 of... 44 0.39
23dbj|AK098311.1| Homo sapiens cDNA FLJ40992 fis, clone UTERU20152... 44 0.39
24ref|XM_941962.1| PREDICTED: Homo sapiens KIAA1394 protein, trans... 44 0.39
25ref|XM_208522.5| PREDICTED: Homo sapiens KIAA1394 protein, trans... 44 0.39
26gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.39
27dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
28gb|AE004677.1| Pseudomonas aeruginosa PAO1, section 238 of 529 o... 44 0.39
29gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 44 0.39
30dbj|AP003257.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
31dbj|AP003021.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
32dbj|AK107733.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
33dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CT... 44 0.39
34dbj|AB037815.1| Homo sapiens mRNA for KIAA1394 protein, partial cds 44 0.39
35ref|NM_183808.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
36ref|NM_183797.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
37ref|NM_204308.1| Gallus gallus amyloid beta (A4) precursor prote... 42 1.6
38gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.6
39ref|XM_957066.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.6
40ref|XM_327305.1| Neurospora crassa OR74A hypothetical protein (N... 42 1.6
41ref|XM_540816.2| PREDICTED: Canis familiaris hypothetical LOC483... 42 1.6
42gb|AF289219.1| Gallus gallus beta-amyloid precursor protein 751 ... 42 1.6
43gb|AF289218.1| Gallus gallus beta-amyloid precursor protein 695 ... 42 1.6
44emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.6
45emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.6
46emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 42 1.6
47gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome... 42 1.6
48dbj|AK029703.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 1.6
49gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.6
50gb|AF111796.1|AF111796 Bordetella bronchiseptica strain GP1 adhe... 42 1.6
51dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
52dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
53gb|AF140678.1|AF140678 Bordetella bronchiseptica FhaB gene, part... 42 1.6
54gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.6
55gb|AC139294.4| Mus musculus BAC clone RP24-239E14 from 14, compl... 42 1.6
56dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.6
57gb|M32730.1|CHKPGRE1E7 Chicken progesterone receptor gene, encod... 42 1.6
58dbj|AB055419.1| Oryza sativa (indica cultivar-group) transposon ... 42 1.6
59gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.1
60gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.1
61ref|XM_466126.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
62ref|XM_518372.1| PREDICTED: Pan troglodytes similar to NG5 prote... 40 6.1
63gb|AC101391.15| Mus musculus chromosome 5, clone RP23-119E13, co... 40 6.1
64ref|XM_369621.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 6.1
65gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 6.1
66gb|AY505177.1| Pseudomonas stutzeri isolate WM88 operon phn, com... 40 6.1
67ref|XM_591329.2| PREDICTED: Bos taurus hypothetical LOC513620, t... 40 6.1
68ref|XM_865449.1| PREDICTED: Bos taurus hypothetical LOC513620, t... 40 6.1
69ref|XM_712033.1| Candida albicans SC5314 putative peroxisomal ma... 40 6.1
70ref|XM_711954.1| Candida albicans SC5314 putative peroxisomal ma... 40 6.1
71gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 6.1
72gb|AC002487.1| Homo sapiens BAC clone CTA-369K23 from 7, complet... 40 6.1
73emb|Z84496.1|HSN75H12 Human DNA sequence from clone LL22NC03-75H... 40 6.1
74emb|AL392043.21| Human DNA sequence from clone RP11-288G11 on ch... 40 6.1
75gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 40 6.1
76gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.1
77gb|AF541923.1| Homo sapiens prostate apoptosis response protein ... 40 6.1
78emb|Z99124.2|BSUB0021 Bacillus subtilis complete genome (section... 40 6.1
79gb|AF503628.1| Homo sapiens prostate apoptosis response protein ... 40 6.1
80gb|AC151985.2| Mus musculus BAC clone RP23-381C14 from chromosom... 40 6.1
81emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.1
82emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.1
83emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 40 6.1
84emb|BX640423.1| Bordetella parapertussis strain 12822, complete ... 40 6.1
85emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 40 6.1
86gb|AY300794.1| Homo sapiens PRKC, apoptosis, WT1, regulator (PAW... 40 6.1
87emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB 40 6.1
88gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequ... 40 6.1
89gb|DQ397551.1| Cenarchaeum symbiosum clone C05D09, complete sequ... 40 6.1
90gb|AC110776.5| Homo sapiens BAC clone RP11-291M14 from 4, comple... 40 6.1
91dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.1
92gb|AC073569.26| Homo sapiens 12 BAC RP11-530C5 (Roswell Park Can... 40 6.1
93gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.1
94dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
95dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
96gb|J01725.1|INSISH1 H.halobium transposable element ISH1 which i... 40 6.1
97gb|AF124980.1|AF124980 Arthrobacter sp. A-6 inulin fructotransfe... 40 6.1
98dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
99gb|AE004972.1| Halobacterium sp. NRC-1 section 3 of 170 of the c... 40 6.1
100dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
101dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
102dbj|AB108448.1| Homo sapiens Par-4 gene for prostate apoptosis r... 40 6.1
103gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.1
104gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.1
105emb|AJ556110.1|HSA556110 Homo sapiens PAR-4 gene for prostate ap... 40 6.1
106dbj|D45912.1| Bacillus subtilis genome sequence between the iol ... 40 6.1 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  109 bits (55), Expect = 8e-21
 Identities = 158/191 (82%), Gaps = 6/191 (3%)
 Strand = Plus / Minus

                                                                            
Query: 262      gctagagccggagcaggcggcggagctcgtcggtggcgccgacgtccacgcccccgccag 321
                ||||||||||||| || || |||||||||||||| || ||||||||||||   |||||| 
Sbjct: 20924066 gctagagccggagtagccgccggagctcgtcggtcgctccgacgtccacg---ccgccac 20924010

                                                                            
Query: 322      cgccagccacctgcacggcgcacggggtcggcaccttcttgcgcccggcgccggcggcca 381
                |||| ||||||| ||||||||||| ||||| | |||||   | ||||||  | ||  | |
Sbjct: 20924009 cgccggccacctccacggcgcacgcggtcgccgccttc---ctcccggccgctgcaccga 20923953

                                                                            
Query: 382      gcagcagcgacgtcggcatcgggacgctactcggcggcggcgacaccgaatacatcgagt 441
                 |||||| |||||||||||||| ||||  |||||||||||||||||||| |||| |||||
Sbjct: 20923952 ccagcagggacgtcggcatcggaacgcagctcggcggcggcgacaccgagtacagcgagt 20923893

                           
Query: 442      ccatcgacgtc 452
                || ||| ||||
Sbjct: 20923892 ccgtcgtcgtc 20923882
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>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1274F11
          Length = 171257

 Score =  109 bits (55), Expect = 8e-21
 Identities = 158/191 (82%), Gaps = 6/191 (3%)
 Strand = Plus / Minus

                                                                         
Query: 262   gctagagccggagcaggcggcggagctcgtcggtggcgccgacgtccacgcccccgccag 321
             ||||||||||||| || || |||||||||||||| || ||||||||||||   |||||| 
Sbjct: 16155 gctagagccggagtagccgccggagctcgtcggtcgctccgacgtccacg---ccgccac 16099

                                                                         
Query: 322   cgccagccacctgcacggcgcacggggtcggcaccttcttgcgcccggcgccggcggcca 381
             |||| ||||||| ||||||||||| ||||| | |||||   | ||||||  | ||  | |
Sbjct: 16098 cgccggccacctccacggcgcacgcggtcgccgccttc---ctcccggccgctgcaccga 16042

                                                                         
Query: 382   gcagcagcgacgtcggcatcgggacgctactcggcggcggcgacaccgaatacatcgagt 441
              |||||| |||||||||||||| ||||  |||||||||||||||||||| |||| |||||
Sbjct: 16041 ccagcagggacgtcggcatcggaacgcagctcggcggcggcgacaccgagtacagcgagt 15982

                        
Query: 442   ccatcgacgtc 452
             || ||| ||||
Sbjct: 15981 ccgtcgtcgtc 15971
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>gb|AY109899.1| Zea mays CL54750_1 mRNA sequence
          Length = 737

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 282 cggagctcgtcggtggcgccgacgtccacg 311
           ||||||||||||||||||||||| ||||||
Sbjct: 149 cggagctcgtcggtggcgccgacatccacg 178
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 361     tgcgcccggcgccggcggccagcagca 387
               ||||| |||||||||||||||||||||
Sbjct: 1965076 tgcgcgcggcgccggcggccagcagca 1965050
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>gb|AC140455.2| Mus musculus BAC clone RP23-24B2 from chromosome 18, complete sequence
          Length = 242533

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 30     aacacatgaaggtcgtaacatag 52
              |||||||||||||||||||||||
Sbjct: 123269 aacacatgaaggtcgtaacatag 123247
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>gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosome 18, complete sequence
          Length = 211919

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 30     aacacatgaaggtcgtaacatag 52
              |||||||||||||||||||||||
Sbjct: 196715 aacacatgaaggtcgtaacatag 196693
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>emb|Z99105.2|BSUB0002 Bacillus subtilis complete genome (section 2 of 21): from 213031 to
              415798
          Length = 202768

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Minus

                                             
Query: 372    ccggcggccagcagcagcgacgtcggcatcg 402
              ||||||||||||||||||| |||||||||||
Sbjct: 196066 ccggcggccagcagcagcg-cgtcggcatcg 196037
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>emb|X77636.1|BSPAAT B.subtilis putative amino acid transporter gene
          Length = 2605

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                           
Query: 372  ccggcggccagcagcagcgacgtcggcatcg 402
            ||||||||||||||||||| |||||||||||
Sbjct: 2051 ccggcggccagcagcagcg-cgtcggcatcg 2080
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>emb|X70356.1|BSSRFAP B.subtilis srfA-sfp gene region for surfactin synthetase
          Length = 32802

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Minus

                                            
Query: 372   ccggcggccagcagcagcgacgtcggcatcg 402
             ||||||||||||||||||| |||||||||||
Sbjct: 32572 ccggcggccagcagcagcg-cgtcggcatcg 32543
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Minus

                                              
Query: 372     ccggcggccagcagcagcgacgtcggcatcg 402
               ||||||||||||||||||| |||||||||||
Sbjct: 2372312 ccggcggccagcagcagcg-cgtcggcatcg 2372283
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 367     cggcgccggcggccagcagcagcgacg 393
               |||||||||| ||||||||||||||||
Sbjct: 7853976 cggcgccggcagccagcagcagcgacg 7854002
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Minus

                                              
Query: 372     ccggcggccagcagcagcgacgtcggcatcg 402
               ||||||||||||||||||| |||||||||||
Sbjct: 6063962 ccggcggccagcagcagcg-cgtcggcatcg 6063933



 Score = 46.1 bits (23), Expect = 0.099
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                              
Query: 372     ccggcggccagcagcagcgacgtcggcatcg 402
               ||||||||||||||||||| |||||||||||
Sbjct: 3053284 ccggcggccagcagcagcg-cgtcggcatcg 3053313
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>gb|L17438.1|BACSFPO Bacillus subtilis surfactin (sfpo) gene, complete cds
          Length = 3370

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Plus

                                          
Query: 372 ccggcggccagcagcagcgacgtcggcatcg 402
           ||||||||||||||||||| |||||||||||
Sbjct: 791 ccggcggccagcagcagcg-cgtcggcatcg 820
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>dbj|D50453.1| Bacillus subtilis DNA for 25-36 degree region containing the amyE-srfA
             region, complete cds
          Length = 146191

 Score = 46.1 bits (23), Expect = 0.099
 Identities = 30/31 (96%), Gaps = 1/31 (3%)
 Strand = Plus / Minus

                                            
Query: 372   ccggcggccagcagcagcgacgtcggcatcg 402
             ||||||||||||||||||| |||||||||||
Sbjct: 88761 ccggcggccagcagcagcg-cgtcggcatcg 88732
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>ref|XM_508594.1| PREDICTED: Pan troglodytes similar to KIAA1394 protein (LOC451368),
            mRNA
          Length = 4191

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 310  cgcccccgccagcgccagccac 331
            ||||||||||||||||||||||
Sbjct: 1397 cgcccccgccagcgccagccac 1376
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>ref|XM_462875.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 639

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 383 cagcagcgacgtcggcatcgggacgc 408
           |||||| |||||||||||||||||||
Sbjct: 432 cagcagggacgtcggcatcgggacgc 407
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>ref|XM_361022.1| Magnaporthe grisea 70-15 hypothetical protein (MG03565.4) partial
            mRNA
          Length = 1590

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 367  cggcgccggcggccagcagcag 388
            ||||||||||||||||||||||
Sbjct: 1512 cggcgccggcggccagcagcag 1533
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>gb|AY657549.1| Synthetic construct Peudomonas aeruginosa clone FLH040788.01F
           PA2498 gene, partial cds
          Length = 633

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 368 ggcgccggcggccagcagcagc 389
           ||||||||||||||||||||||
Sbjct: 627 ggcgccggcggccagcagcagc 606
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>emb|AJ010321.1|CAJ10321 Caulobacter crescentus partial tig gene and clpP, cicA, clpX, lon
            genes
          Length = 6710

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 367  cggcgccggcggccagcagcagcgac 392
            ||||||| ||||||||||||||||||
Sbjct: 1534 cggcgcccgcggccagcagcagcgac 1509
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 362     gcgcccggcgccggcggccagcagca 387
               ||||||||||| ||||||||||||||
Sbjct: 3024310 gcgcccggcgcaggcggccagcagca 3024335



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 368     ggcgccggcggccagcagcagcgac 392
               ||||| |||||||||||||||||||
Sbjct: 5468045 ggcgctggcggccagcagcagcgac 5468069



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 372     ccggcggccagcagcagcga 391
               ||||||||||||||||||||
Sbjct: 2404051 ccggcggccagcagcagcga 2404070
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>dbj|AK127616.1| Homo sapiens cDNA FLJ45714 fis, clone FEKID2002637, highly  similar
           to Serine/threonine protein phosphatase PP1-alpha 1
           catalytic subunit (EC 3.1.3.16)
          Length = 1685

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 310 cgcccccgccagcgccagccac 331
           ||||||||||||||||||||||
Sbjct: 279 cgcccccgccagcgccagccac 300
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>gb|AE005869.1| Caulobacter crescentus CB15 section 195 of 359 of the complete genome
          Length = 10960

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 367  cggcgccggcggccagcagcagcgac 392
            ||||||| ||||||||||||||||||
Sbjct: 8951 cggcgcccgcggccagcagcagcgac 8976
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>dbj|AK098311.1| Homo sapiens cDNA FLJ40992 fis, clone UTERU2015202, highly similar
           to Human protein phosphatase I alpha subunit (PPPIA)
           mRNA
          Length = 2279

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 310 cgcccccgccagcgccagccac 331
           ||||||||||||||||||||||
Sbjct: 871 cgcccccgccagcgccagccac 892
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>ref|XM_941962.1| PREDICTED: Homo sapiens KIAA1394 protein, transcript variant 3
            (KIAA1394), mRNA
          Length = 5056

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 310  cgcccccgccagcgccagccac 331
            ||||||||||||||||||||||
Sbjct: 2092 cgcccccgccagcgccagccac 2071
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>ref|XM_208522.5| PREDICTED: Homo sapiens KIAA1394 protein, transcript variant 1
            (KIAA1394), mRNA
          Length = 5055

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 310  cgcccccgccagcgccagccac 331
            ||||||||||||||||||||||
Sbjct: 2092 cgcccccgccagcgccagccac 2071
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 371     gccggcggccagcagcagcgac 392
               ||||||||||||||||||||||
Sbjct: 2941684 gccggcggccagcagcagcgac 2941663



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 34/38 (89%), Gaps = 3/38 (7%)
 Strand = Plus / Minus

                                                    
Query: 389    cgacgtcggcatcgggacgctac---tcggcggcggcg 423
              ||||| |||||||||||||||||   ||||||||||||
Sbjct: 451167 cgacgacggcatcgggacgctacgggtcggcggcggcg 451130
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 383      cagcagcgacgtcggcatcgggacgc 408
                |||||| |||||||||||||||||||
Sbjct: 14768672 cagcagggacgtcggcatcgggacgc 14768697



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 274      gcaggcggcggagctcgtcgg 294
                |||||||||||||||||||||
Sbjct: 12472580 gcaggcggcggagctcgtcgg 12472600



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 274      gcaggcggcggagctcgtcgg 294
                |||||||||||||||||||||
Sbjct: 12359180 gcaggcggcggagctcgtcgg 12359160
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>gb|AE004677.1| Pseudomonas aeruginosa PAO1, section 238 of 529 of the complete
            genome
          Length = 9950

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 368  ggcgccggcggccagcagcagc 389
            ||||||||||||||||||||||
Sbjct: 2314 ggcgccggcggccagcagcagc 2293
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 388     gcgacgtcggcatcgggacgctactcggcg 417
               ||||||||| ||||||| ||||||||||||
Sbjct: 2451381 gcgacgtcgccatcggggcgctactcggcg 2451410
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>dbj|AP003257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0460H02
          Length = 155012

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 383    cagcagcgacgtcggcatcgggacgc 408
              |||||| |||||||||||||||||||
Sbjct: 137772 cagcagggacgtcggcatcgggacgc 137797
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>dbj|AP003021.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0503E05
          Length = 168258

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 383  cagcagcgacgtcggcatcgggacgc 408
            |||||| |||||||||||||||||||
Sbjct: 4716 cagcagggacgtcggcatcgggacgc 4741
to top
>dbj|AK107733.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-F11, full
           insert sequence
          Length = 743

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 383 cagcagcgacgtcggcatcgggacgc 408
           |||||| |||||||||||||||||||
Sbjct: 470 cagcagggacgtcggcatcgggacgc 445
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>dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-1337H24, complete
             sequence
          Length = 168565

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 310   cgcccccgccagcgccagccac 331
             ||||||||||||||||||||||
Sbjct: 99989 cgcccccgccagcgccagccac 99968
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>dbj|AB037815.1| Homo sapiens mRNA for KIAA1394 protein, partial cds
          Length = 5065

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 310  cgcccccgccagcgccagccac 331
            ||||||||||||||||||||||
Sbjct: 2098 cgcccccgccagcgccagccac 2077
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>ref|NM_183808.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1638

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 274 gcaggcggcggagctcgtcgg 294
           |||||||||||||||||||||
Sbjct: 706 gcaggcggcggagctcgtcgg 686
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>ref|NM_183797.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 867

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 274 gcaggcggcggagctcgtcgg 294
           |||||||||||||||||||||
Sbjct: 706 gcaggcggcggagctcgtcgg 686
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>ref|NM_204308.1| Gallus gallus amyloid beta (A4) precursor protein (peptidase
           nexin-II, Alzheimer disease) (APP), mRNA
          Length = 3081

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 367 cggcgccggcggccagcagca 387
           |||||||||||||||||||||
Sbjct: 151 cggcgccggcggccagcagca 131
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 366     ccggcgccggcggccagcagcagcg 390
               |||||||||||| ||||||||||||
Sbjct: 2519089 ccggcgccggcgtccagcagcagcg 2519065



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 372     ccggcggccagcagcagcgac 392
               |||||||||||||||||||||
Sbjct: 1906002 ccggcggccagcagcagcgac 1906022
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>ref|XM_957066.1| Neurospora crassa OR74A hypothetical protein (NCU07020.1) partial
            mRNA
          Length = 1989

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 306  tccacgcccccgccagcgcca 326
            |||||||||||||||||||||
Sbjct: 1835 tccacgcccccgccagcgcca 1815
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>ref|XM_327305.1| Neurospora crassa OR74A hypothetical protein (NCU07020.1) partial
            mRNA
          Length = 1989

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 306  tccacgcccccgccagcgcca 326
            |||||||||||||||||||||
Sbjct: 1835 tccacgcccccgccagcgcca 1815
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>ref|XM_540816.2| PREDICTED: Canis familiaris hypothetical LOC483695 (LOC483695),
           mRNA
          Length = 2781

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 311 gcccccgccagcgccagccac 331
           |||||||||||||||||||||
Sbjct: 940 gcccccgccagcgccagccac 920
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>gb|AF289219.1| Gallus gallus beta-amyloid precursor protein 751 isoform mRNA,
           complete cds
          Length = 3081

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 367 cggcgccggcggccagcagca 387
           |||||||||||||||||||||
Sbjct: 151 cggcgccggcggccagcagca 131
to top
>gb|AF289218.1| Gallus gallus beta-amyloid precursor protein 695 isoform mRNA,
           complete cds
          Length = 2913

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 367 cggcgccggcggccagcagca 387
           |||||||||||||||||||||
Sbjct: 151 cggcgccggcggccagcagca 131
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>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16
          Length = 348642

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   gcccggcgccggcggccagca 384
             |||||||||||||||||||||
Sbjct: 55952 gcccggcgccggcggccagca 55972
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 364   gcccggcgccggcggccagca 384
             |||||||||||||||||||||
Sbjct: 24308 gcccggcgccggcggccagca 24288
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>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 364    gcccggcgccggcggccagca 384
              |||||||||||||||||||||
Sbjct: 129300 gcccggcgccggcggccagca 129320
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>gb|AC151836.3| Mus musculus BAC clone RP23-359F5 from chromosome 14, complete sequence
          Length = 230502

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 92     agtggcaatgctgaatcagta 112
              |||||||||||||||||||||
Sbjct: 181566 agtggcaatgctgaatcagta 181546
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>dbj|AK029703.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930484D16 product:SH3 domain protein 4,
            full insert sequence
          Length = 2417

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 92   agtggcaatgctgaatcagta 112
            |||||||||||||||||||||
Sbjct: 2363 agtggcaatgctgaatcagta 2383
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 272     gagcaggcggcggagctcgtc 292
               |||||||||||||||||||||
Sbjct: 4162492 gagcaggcggcggagctcgtc 4162512



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 266    gagccggagcaggcggcggag 286
              |||||||||||||||||||||
Sbjct: 687684 gagccggagcaggcggcggag 687704



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 367     cggcgccggcggccagcagc 386
               ||||||||||||||||||||
Sbjct: 2812248 cggcgccggcggccagcagc 2812267
to top
>gb|AF111796.1|AF111796 Bordetella bronchiseptica strain GP1 adhesin (fhaB) and putative
            major fimbrial structural subunit (fimA) genes, complete
            cds
          Length = 12256

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 364  gcccggcgccggcggccagca 384
            |||||||||||||||||||||
Sbjct: 6869 gcccggcgccggcggccagca 6849
to top
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1135C02
          Length = 152306

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 274   gcaggcggcggagctcgtcgg 294
             |||||||||||||||||||||
Sbjct: 58195 gcaggcggcggagctcgtcgg 58215
to top
>dbj|AP003211.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0011P19
          Length = 150811

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   gcaggcggcggagctcgtcgg 294
             |||||||||||||||||||||
Sbjct: 44825 gcaggcggcggagctcgtcgg 44805
to top
>gb|AF140678.1|AF140678 Bordetella bronchiseptica FhaB gene, partial cds
          Length = 1728

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 364  gcccggcgccggcggccagca 384
            |||||||||||||||||||||
Sbjct: 1522 gcccggcgccggcggccagca 1502
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 370     cgccggcggccagcagcagcg 390
               |||||||||||||||||||||
Sbjct: 1866441 cgccggcggccagcagcagcg 1866421



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 370    cgccggcggccagcagcagcg 390
              |||||||||||||||||||||
Sbjct: 935855 cgccggcggccagcagcagcg 935875



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 371    gccggcggccagcagcagcga 391
              |||||||||||||||||||||
Sbjct: 248913 gccggcggccagcagcagcga 248933
to top
>gb|AC139294.4| Mus musculus BAC clone RP24-239E14 from 14, complete sequence
          Length = 183363

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 92    agtggcaatgctgaatcagta 112
             |||||||||||||||||||||
Sbjct: 64163 agtggcaatgctgaatcagta 64143
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 368     ggcgccggcggccagcagcag 388
               |||||||||||||||||||||
Sbjct: 2806476 ggcgccggcggccagcagcag 2806456
to top
>gb|M32730.1|CHKPGRE1E7 Chicken progesterone receptor gene, encoding forms A and B, exon 7
          Length = 1826

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 64  aaggaactgaaaagaaatcaacatt 88
           ||||||||||||||||| |||||||
Sbjct: 351 aaggaactgaaaagaaagcaacatt 327
to top
>dbj|AB055419.1| Oryza sativa (indica cultivar-group) transposon RMu2-IR36b DNA,
           complete sequence
          Length = 929

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 384 agcagcgacgtcggcatcgggacgc 408
           ||||| |||||||||||||||||||
Sbjct: 324 agcagggacgtcggcatcgggacgc 348
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 373     cggcggccagcagcagcgacgtcggcat 400
               |||||||||||||||||| |||||||||
Sbjct: 1633967 cggcggccagcagcagcg-cgtcggcat 1633993
to top
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940130D9, complete sequence
          Length = 117683

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 372   ccggcggccagcagcagcgacgtc 395
             ||||||||||||||||||| ||||
Sbjct: 41774 ccggcggccagcagcagcgtcgtc 41797
to top
>ref|XM_466126.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 984

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 368 ggcgccggcggccagcagca 387
           ||||||||||||||||||||
Sbjct: 201 ggcgccggcggccagcagca 220
to top
>ref|XM_518372.1| PREDICTED: Pan troglodytes similar to NG5 protein (LOC462579), mRNA
          Length = 841

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 310 cgcccccgccagcgccagcc 329
           ||||||||||||||||||||
Sbjct: 492 cgcccccgccagcgccagcc 511
to top
>gb|AC101391.15| Mus musculus chromosome 5, clone RP23-119E13, complete sequence
          Length = 209590

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     cacaacacaaggaactgaaa 75
              ||||||||||||||||||||
Sbjct: 137433 cacaacacaaggaactgaaa 137452
to top
>ref|XM_369621.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG05843.4) partial mRNA
          Length = 1425

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 366 ccggcgccggcggccagcag 385
           ||||||||||||||||||||
Sbjct: 206 ccggcgccggcggccagcag 225
to top
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 103    tgaatcagtacatcgttgttacagctcg 130
              ||||| |||||| |||||||||||||||
Sbjct: 109707 tgaattagtacaacgttgttacagctcg 109680
to top
>gb|AY505177.1| Pseudomonas stutzeri isolate WM88 operon phn, complete sequence
          Length = 10577

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 372 ccggcggccagcagcagcga 391
           ||||||||||||||||||||
Sbjct: 461 ccggcggccagcagcagcga 480
to top
>ref|XM_591329.2| PREDICTED: Bos taurus hypothetical LOC513620, transcript variant 1
           (LOC513620), mRNA
          Length = 2960

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 313 ccccgccagcgccagccacc 332
           ||||||||||||||||||||
Sbjct: 694 ccccgccagcgccagccacc 675
to top
>ref|XM_865449.1| PREDICTED: Bos taurus hypothetical LOC513620, transcript variant 3
           (LOC513620), mRNA
          Length = 2922

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 313 ccccgccagcgccagccacc 332
           ||||||||||||||||||||
Sbjct: 656 ccccgccagcgccagccacc 637
to top
>ref|XM_712033.1| Candida albicans SC5314 putative peroxisomal malate dehydrogenase
           (CaO19_5323), mRNA
          Length = 1029

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  ggaactgaaaagaaatcaac 85
           ||||||||||||||||||||
Sbjct: 872 ggaactgaaaagaaatcaac 853
to top
>ref|XM_711954.1| Candida albicans SC5314 putative peroxisomal malate dehydrogenase
           (CaO19_12783), mRNA
          Length = 1029

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 66  ggaactgaaaagaaatcaac 85
           ||||||||||||||||||||
Sbjct: 872 ggaactgaaaagaaatcaac 853
to top
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 364     gcccggcgccggcggccagcagca 387
               |||||| |||||||||||||||||
Sbjct: 4798685 gcccggtgccggcggccagcagca 4798708
to top
>gb|AC002487.1| Homo sapiens BAC clone CTA-369K23 from 7, complete sequence
          Length = 181588

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 271   ggagcaggcggcggagctcgtcgg 294
             |||||||| |||||||||||||||
Sbjct: 28532 ggagcagggggcggagctcgtcgg 28555
to top
>emb|Z84496.1|HSN75H12 Human DNA sequence from clone LL22NC03-75H12 on chromosome 22, complete
             sequence
          Length = 46144

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   ccagcgccagccacctgcac 337
             ||||||||||||||||||||
Sbjct: 33733 ccagcgccagccacctgcac 33752
to top
>emb|AL392043.21| Human DNA sequence from clone RP11-288G11 on chromosome 10 Contains the
              3' end of the INPP5A gene for inositol
              polyphosphate-5-phosphatase 40kDa, a novel gene, the NKX6-2
              gene for NK6 transcription factor related locus 2, a novel
              gene (DKFZp434A1721), the 3' end of a novel gene and ten
              CpG islands, complete sequence
          Length = 208064

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 271    ggagcaggcggcggagctcgtcgg 294
              |||||||| |||||||||||||||
Sbjct: 123542 ggagcagggggcggagctcgtcgg 123565



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 271  ggagcaggcggcggagctcgtcgg 294
            |||||||| |||||||||||||||
Sbjct: 3548 ggagcagggggcggagctcgtcgg 3525
to top
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 372     ccggcggccagcagcagcga 391
               ||||||||||||||||||||
Sbjct: 2214520 ccggcggccagcagcagcga 2214539
to top
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940141D9, complete sequence
          Length = 117679

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 372   ccggcggccagcagcagcgacgtc 395
             ||||||||||||||||||| ||||
Sbjct: 75908 ccggcggccagcagcagcgtcgtc 75885
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>gb|AF541923.1| Homo sapiens prostate apoptosis response protein PAR-4 gene, promoter
            region, 5'UTR and partial cds
          Length = 2007

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 254  cggcggtggctagagc-cggagcaggcg 280
            |||||||||||||||| |||||||||||
Sbjct: 1510 cggcggtggctagagcgcggagcaggcg 1537
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>emb|Z99124.2|BSUB0021 Bacillus subtilis complete genome (section 21 of 21): from 4010730 to
             4214630
          Length = 203901

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   ccggcggccagcagcagcga 391
             ||||||||||||||||||||
Sbjct: 46644 ccggcggccagcagcagcga 46625
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>gb|AF503628.1| Homo sapiens prostate apoptosis response protein PAR-4 gene, promoter
            region, 5'UTR and partial cds
          Length = 5935

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 254  cggcggtggctagagc-cggagcaggcg 280
            |||||||||||||||| |||||||||||
Sbjct: 5250 cggcggtggctagagcgcggagcaggcg 5277
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>gb|AC151985.2| Mus musculus BAC clone RP23-381C14 from chromosome 5, complete sequence
          Length = 204862

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    cacaacacaaggaactgaaa 75
             ||||||||||||||||||||
Sbjct: 66783 cacaacacaaggaactgaaa 66802
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 367    cggcgccggcggccagcagc 386
              ||||||||||||||||||||
Sbjct: 107409 cggcgccggcggccagcagc 107390
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>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    ccggcgccggcggccagcag 385
              ||||||||||||||||||||
Sbjct: 296053 ccggcgccggcggccagcag 296034
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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 367   cggcgccggcggccagcagc 386
             ||||||||||||||||||||
Sbjct: 23402 cggcgccggcggccagcagc 23383
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>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    ccggcgccggcggccagcag 385
              ||||||||||||||||||||
Sbjct: 300706 ccggcgccggcggccagcag 300687
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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   cgtcggtggcgccgacgtcc 308
             ||||||||||||||||||||
Sbjct: 46660 cgtcggtggcgccgacgtcc 46641
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>gb|AY300794.1| Homo sapiens PRKC, apoptosis, WT1, regulator (PAWR) gene, complete
           cds
          Length = 100636

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                       
Query: 254 cggcggtggctagagc-cggagcaggcg 280
           |||||||||||||||| |||||||||||
Sbjct: 682 cggcggtggctagagcgcggagcaggcg 709
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>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB
          Length = 1683333

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 372    ccggcggccagcagcagcga 391
              ||||||||||||||||||||
Sbjct: 174526 ccggcggccagcagcagcga 174545
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>gb|DQ397600.1| Cenarchaeum symbiosum clone C07B08, complete sequence
          Length = 41295

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 370   cgccggcggccagcagcagc 389
             ||||||||||||||||||||
Sbjct: 24607 cgccggcggccagcagcagc 24626
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>gb|DQ397551.1| Cenarchaeum symbiosum clone C05D09, complete sequence
          Length = 43893

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 370  cgccggcggccagcagcagc 389
            ||||||||||||||||||||
Sbjct: 2368 cgccggcggccagcagcagc 2387
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>gb|AC110776.5| Homo sapiens BAC clone RP11-291M14 from 4, complete sequence
          Length = 138838

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   catccacagctccctcgcct 230
             ||||||||||||||||||||
Sbjct: 80325 catccacagctccctcgcct 80306
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 406     cgctactcggcggcggcgacaccg 429
               |||| |||||||||||||||||||
Sbjct: 4918504 cgctcctcggcggcggcgacaccg 4918481
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>gb|AC073569.26| Homo sapiens 12 BAC RP11-530C5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 177734

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 254   cggcggtggctagagc-cggagcaggcg 280
             |||||||||||||||| |||||||||||
Sbjct: 40459 cggcggtggctagagcgcggagcaggcg 40432
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 373     cggcggccagcagcagcgacgtcg 396
               |||||||||||||||||| |||||
Sbjct: 1623095 cggcggccagcagcagcgtcgtcg 1623118
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 204      cttcatccatccacagctcc 223
                ||||||||||||||||||||
Sbjct: 18995291 cttcatccatccacagctcc 18995272
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 368      ggcgccggcggccagcagca 387
                ||||||||||||||||||||
Sbjct: 20554915 ggcgccggcggccagcagca 20554934
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>gb|J01725.1|INSISH1 H.halobium transposable element ISH1 which inserts into the
           bacterio-opsin (BO) gene
          Length = 1118

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 cggagcaggcggcggagctc 289
           ||||||||||||||||||||
Sbjct: 385 cggagcaggcggcggagctc 366
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>gb|AF124980.1|AF124980 Arthrobacter sp. A-6 inulin fructotransferase precursor (ift) gene,
           complete cds
          Length = 2367

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 367 cggcgccggcggccagcagc 386
           ||||||||||||||||||||
Sbjct: 438 cggcgccggcggccagcagc 419
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>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1198_B10
          Length = 119768

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   cttcatccatccacagctcc 223
             ||||||||||||||||||||
Sbjct: 80211 cttcatccatccacagctcc 80192
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>gb|AE004972.1| Halobacterium sp. NRC-1 section 3 of 170 of the complete genome
          Length = 10053

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 270  cggagcaggcggcggagctc 289
            ||||||||||||||||||||
Sbjct: 7864 cggagcaggcggcggagctc 7883
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>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0051E21
          Length = 137959

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 368   ggcgccggcggccagcagca 387
             ||||||||||||||||||||
Sbjct: 50473 ggcgccggcggccagcagca 50492
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>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1051_A08
          Length = 137583

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   cttcatccatccacagctcc 223
             ||||||||||||||||||||
Sbjct: 20078 cttcatccatccacagctcc 20059
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>dbj|AB108448.1| Homo sapiens Par-4 gene for prostate apoptosis response-4, complete
            cds
          Length = 2007

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 254  cggcggtggctagagc-cggagcaggcg 280
            |||||||||||||||| |||||||||||
Sbjct: 1510 cggcggtggctagagcgcggagcaggcg 1537
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    gcagcagcgacgtcggcatc 401
              ||||||||||||||||||||
Sbjct: 891630 gcagcagcgacgtcggcatc 891611



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 411    ctcggcggcggcgacaccga 430
              ||||||||||||||||||||
Sbjct: 519285 ctcggcggcggcgacaccga 519266
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 367     cggcgccggcggccagcagc 386
               ||||||||||||||||||||
Sbjct: 4537874 cggcgccggcggccagcagc 4537855
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>emb|AJ556110.1|HSA556110 Homo sapiens PAR-4 gene for prostate apoptosis response-4
          Length = 2007

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                        
Query: 254  cggcggtggctagagc-cggagcaggcg 280
            |||||||||||||||| |||||||||||
Sbjct: 1510 cggcggtggctagagcgcggagcaggcg 1537
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>dbj|D45912.1| Bacillus subtilis genome sequence between the iol and hut operon,
             partial and complete cds
          Length = 23351

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 372   ccggcggccagcagcagcga 391
             ||||||||||||||||||||
Sbjct: 13609 ccggcggccagcagcagcga 13628


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,665,098
Number of Sequences: 3902068
Number of extensions: 3665098
Number of successful extensions: 86407
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 82392
Number of HSP's gapped (non-prelim): 4033
length of query: 455
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 433
effective length of database: 17,147,199,772
effective search space: 7424737501276
effective search space used: 7424737501276
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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