ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart19a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190039.1| Oryza sativa (japonica cultivar-group), predic... 98 3e-17
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
3dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
4dbj|AK103927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
5dbj|AK059985.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
6gb|AF309383.1| Oryza sativa (japonica cultivar-group) clone S102... 90 7e-15
7gb|BT009259.1| Triticum aestivum clone wlk4.pk0015.a10:fis, full... 84 4e-13
8emb|AJ440794.1|TAE440794 Triticum aestivum mRNA for glutathione ... 84 4e-13
9emb|AJ010295.1|ZMA010295 Zea mays mRNA for glutathione transfera... 52 0.002
10ref|NM_197602.1| Oryza sativa (japonica cultivar-group) putative... 44 0.37
11gb|AC072039.19| Homo sapiens 3 BAC RP11-305O4 (Roswell Park Canc... 44 0.37
12emb|AL096853.13|HSFF96H12 Human DNA sequence from clone CITF22-9... 44 0.37
13gb|BT009137.1| Triticum aestivum clone wl1n.pk0040.b1:fis, full ... 44 0.37
14emb|X04455.1|ZMGGST3B Maize mRNA for glutathione-S-transferase G... 44 0.37
15emb|X06755.1|ZMGST3 Maize mRNA for GSH gluthathione S-transferas... 44 0.37
16emb|X04375.1|ZMGST3A Maize mRNA for glutathione-S-transferase GS... 44 0.37
17emb|AJ010296.1|ZMA010296 Zea mays mRNA for glutathione transfera... 44 0.37
18gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 geno... 44 0.37
19dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.37
20gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.37
21dbj|AB103350.1| Oryza sativa (japonica cultivar-group) GST mRNA ... 44 0.37
22dbj|AK068795.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.37
23gb|AY105647.1| Zea mays PCO132886 mRNA sequence 44 0.37
24gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.37
25gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequ... 42 1.5
26gb|CP000097.1| Synechococcus sp. CC9902, complete genome 40 5.8
27ref|XM_470191.1| Oryza sativa (japonica cultivar-group), predic... 40 5.8
28ref|XM_507407.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
29ref|NM_186107.2| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
30ref|XM_506553.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
31gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 5.8
32gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.8
33gb|AY533123.1| Oryza sativa (japonica cultivar-group) glutathion... 40 5.8
34gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 5.8
35gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.8
36ref|XM_755540.1| Ustilago maydis 521 hypothetical protein (UM044... 40 5.8
37gb|AC073094.11| Homo sapiens BAC clone RP11-369D24 from 7, compl... 40 5.8
38emb|AL591431.8| Human DNA sequence from clone RP11-1057F13 on ch... 40 5.8
39emb|AL512592.14| Human DNA sequence from clone RP11-35D6 on chro... 40 5.8
40gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
41emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome... 40 5.8
42emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 5.8
43gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.8
44gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete se... 40 5.8
45gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 5.8
46gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 5.8
47dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosom... 40 5.8
50dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
51dbj|AK110228.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
52dbj|AK105114.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
53dbj|AK103292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
54ref|NM_207866.1| Eremothecium gossypii AAL029Wp (AAL029W), mRNA 40 5.8
55emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.8
56dbj|AK063550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
57dbj|AK059955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
58gb|AY108505.1| Zea mays PCO143785 mRNA sequence 40 5.8
59emb|BX294124.8| Mouse DNA sequence from clone RP23-80H12 on chro... 40 5.8 
>ref|NM_190039.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 666

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 91/105 (86%)
 Strand = Plus / Minus

                                                                       
Query: 186 gccggcgggagggggagcgcggcgacggtcttcttccaggcggggcgggcggagatctcg 245
           |||||||||| |||||  |||||| ||||||||||||| || ||||| | |||||| |||
Sbjct: 659 gccggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcg 600

                                                        
Query: 246 tcccaccacgcctgcacgtgcggcctggcggccacgagctccgcc 290
           |||||||||||||  |||||||||||||  || ||||||||||||
Sbjct: 599 tcccaccacgccttgacgtgcggcctggacgcgacgagctccgcc 555



 Score = 46.1 bits (23), Expect = 0.095
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 382 cggcgaggtgcgcgtcgtatacgtcgagcac 412
           |||||||||| |||||||| |||||||||||
Sbjct: 469 cggcgaggtgggcgtcgtagacgtcgagcac 439
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                            
Query: 186      gccggcgggagggggagcgcggcgacggtcttcttccaggcggggcgggcggagatctcg 245
                |||||||||| |||||  |||||| ||||||||||||| || ||||| | |||||| |||
Sbjct: 40955229 gccggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcg 40955288

                                                             
Query: 246      tcccaccacgcctgcacgtgcggcctggcggccacgagctccgcc 290
                |||||||||||||  |||||||||||||  || ||||||||||||
Sbjct: 40955289 tcccaccacgccttgacgtgcggcctggacgcgacgagctccgcc 40955333



 Score = 46.1 bits (23), Expect = 0.095
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 382      cggcgaggtgcgcgtcgtatacgtcgagcac 412
                |||||||||| |||||||| |||||||||||
Sbjct: 40955419 cggcgaggtgggcgtcgtagacgtcgagcac 40955449
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>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0423A12
          Length = 178649

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                         
Query: 186   gccggcgggagggggagcgcggcgacggtcttcttccaggcggggcgggcggagatctcg 245
             |||||||||| |||||  |||||| ||||||||||||| || ||||| | |||||| |||
Sbjct: 83654 gccggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcg 83713

                                                          
Query: 246   tcccaccacgcctgcacgtgcggcctggcggccacgagctccgcc 290
             |||||||||||||  |||||||||||||  || ||||||||||||
Sbjct: 83714 tcccaccacgccttgacgtgcggcctggacgcgacgagctccgcc 83758



 Score = 46.1 bits (23), Expect = 0.095
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 382   cggcgaggtgcgcgtcgtatacgtcgagcac 412
             |||||||||| |||||||| |||||||||||
Sbjct: 83844 cggcgaggtgggcgtcgtagacgtcgagcac 83874
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>dbj|AK103927.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D04, full
           insert sequence
          Length = 871

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 91/105 (86%)
 Strand = Plus / Minus

                                                                       
Query: 186 gccggcgggagggggagcgcggcgacggtcttcttccaggcggggcgggcggagatctcg 245
           |||||||||| |||||  |||||| ||||||||||||| || ||||| | |||||| |||
Sbjct: 740 gccggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcg 681

                                                        
Query: 246 tcccaccacgcctgcacgtgcggcctggcggccacgagctccgcc 290
           |||||||||||||  |||||||||||||  || ||||||||||||
Sbjct: 680 tcccaccacgccttgacgtgcggcctggacgcgacgagctccgcc 636



 Score = 46.1 bits (23), Expect = 0.095
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 382 cggcgaggtgcgcgtcgtatacgtcgagcac 412
           |||||||||| |||||||| |||||||||||
Sbjct: 550 cggcgaggtgggcgtcgtagacgtcgagcac 520
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>dbj|AK059985.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-G06, full
           insert sequence
          Length = 963

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 91/105 (86%)
 Strand = Plus / Minus

                                                                       
Query: 186 gccggcgggagggggagcgcggcgacggtcttcttccaggcggggcgggcggagatctcg 245
           |||||||||| |||||  |||||| ||||||||||||| || ||||| | |||||| |||
Sbjct: 815 gccggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcg 756

                                                        
Query: 246 tcccaccacgcctgcacgtgcggcctggcggccacgagctccgcc 290
           |||||||||||||  |||||||||||||  || ||||||||||||
Sbjct: 755 tcccaccacgccttgacgtgcggcctggacgcgacgagctccgcc 711



 Score = 46.1 bits (23), Expect = 0.095
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 382 cggcgaggtgcgcgtcgtatacgtcgagcac 412
           |||||||||| |||||||| |||||||||||
Sbjct: 625 cggcgaggtgggcgtcgtagacgtcgagcac 595
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>gb|AF309383.1| Oryza sativa (japonica cultivar-group) clone S10202_1A putative
           glutathione S-transferase OsGSTF4 mRNA, complete cds
          Length = 1032

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                       
Query: 186 gccggcgggagggggagcgcggcgacggtcttcttccaggcggggcgggcggagatctcg 245
           |||||||||| |||||  |||||| ||||||||||||| || ||||| | |||||| |||
Sbjct: 739 gccggcgggaaggggatggcggcggcggtcttcttccacgccgggcgcgaggagatgtcg 680

                                                        
Query: 246 tcccaccacgcctgcacgtgcggcctggcggccacgagctccgcc 290
           |||||||||||||  ||||||||||||   || ||||||||||||
Sbjct: 679 tcccaccacgccttgacgtgcggcctgaacgcgacgagctccgcc 635



 Score = 46.1 bits (23), Expect = 0.095
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 382 cggcgaggtgcgcgtcgtatacgtcgagcac 412
           |||||||||| |||||||| |||||||||||
Sbjct: 549 cggcgaggtgggcgtcgtagacgtcgagcac 519
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>gb|BT009259.1| Triticum aestivum clone wlk4.pk0015.a10:fis, full insert mRNA
           sequence
          Length = 788

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 189 ggcgggagggggagcgcggcgacggtcttcttccaggcggggcgggcggagatctcgtcc 248
           |||||||||||||  | ||||||||||||   |||||||||||||||||||||||| |||
Sbjct: 694 ggcgggagggggatggaggcgacggtcttggcccaggcggggcgggcggagatctcctcc 635

                                                     
Query: 249 caccacgcctgcacgtgcggcctggcggccacgagctccgcc 290
           ||||| ||||  |||||||| | || |||||| || ||||||
Sbjct: 634 caccaggccttgacgtgcgggcgggaggccaccaggtccgcc 593



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 73/85 (85%)
 Strand = Plus / Minus

                                                                       
Query: 327 atgtggttcacgtcggcgagagtgaactgctcgccggcgaggtacctgttcccggcggcg 386
           ||||||||  |||||||||| |||||    |||||||| |||||| ||||||||||||||
Sbjct: 559 atgtggttggcgtcggcgagcgtgaaggcgtcgccggccaggtacttgttcccggcggcg 500

                                    
Query: 387 aggtgcgcgtcgtatacgtcgagca 411
           ||||| || ||||| ||||||||||
Sbjct: 499 aggtgggcctcgtagacgtcgagca 475
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>emb|AJ440794.1|TAE440794 Triticum aestivum mRNA for glutathione transferase F5 (gstf5 gene)
          Length = 866

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 87/102 (85%)
 Strand = Plus / Minus

                                                                       
Query: 189 ggcgggagggggagcgcggcgacggtcttcttccaggcggggcgggcggagatctcgtcc 248
           |||||||||||||  | ||||||||||||   |||||||||||||||||||||||| |||
Sbjct: 676 ggcgggagggggatggaggcgacggtcttggcccaggcggggcgggcggagatctcctcc 617

                                                     
Query: 249 caccacgcctgcacgtgcggcctggcggccacgagctccgcc 290
           ||||| ||||  |||||||| | || |||||| || ||||||
Sbjct: 616 caccaggccttgacgtgcgggcgggaggccaccaggtccgcc 575



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                  
Query: 357 tcgccggcgaggtacctgttcccggcggcgaggtgcgcgtcgtatacgtcgagca 411
           |||||||| |||||| ||||||||||||||||||| || ||||| ||||||||||
Sbjct: 511 tcgccggccaggtacttgttcccggcggcgaggtgggcctcgtagacgtcgagca 457
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>emb|AJ010295.1|ZMA010295 Zea mays mRNA for glutathione transferase III(a)
          Length = 906

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 64/76 (84%), Gaps = 3/76 (3%)
 Strand = Plus / Minus

                                                                       
Query: 337 cgtcggcgagagtgaactgctcgccggcgaggtacctgttcccggcggcgaggtgcgcgt 396
           |||||||||| |||||||  || |||||||||||| ||||   |  |||||||||||| |
Sbjct: 575 cgtcggcgagcgtgaactcgtccccggcgaggtacttgtt---gcgggcgaggtgcgcct 519

                           
Query: 397 cgtatacgtcgagcac 412
           |||| |||||||||||
Sbjct: 518 cgtacacgtcgagcac 503
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>ref|NM_197602.1| Oryza sativa (japonica cultivar-group) putative glutathione
           S-transferase (OSJNBb0015I11.25), mRNA
          Length = 1206

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 338 gtcggcgagagtgaactgctcgccggcgaggtac 371
           ||||||||| |||||||  |||||||||||||||
Sbjct: 756 gtcggcgagggtgaacttgtcgccggcgaggtac 723
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>gb|AC072039.19| Homo sapiens 3 BAC RP11-305O4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154964

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 52    tcagctgttcataatcatacca 73
             ||||||||||||||||||||||
Sbjct: 32094 tcagctgttcataatcatacca 32115
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>emb|AL096853.13|HSFF96H12 Human DNA sequence from clone CITF22-96H12 on chromosome 22, complete
             sequence
          Length = 17027

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 188   cggcgggagggggagcgcggcg 209
             ||||||||||||||||||||||
Sbjct: 11115 cggcgggagggggagcgcggcg 11094
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>gb|BT009137.1| Triticum aestivum clone wl1n.pk0040.b1:fis, full insert mRNA
           sequence
          Length = 920

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 63/76 (82%), Gaps = 3/76 (3%)
 Strand = Plus / Minus

                                                                       
Query: 337 cgtcggcgagagtgaactgctcgccggcgaggtacctgttcccggcggcgaggtgcgcgt 396
           |||||||||| |||||||  || |||||||||||| ||||   |  ||| |||||||| |
Sbjct: 560 cgtcggcgagcgtgaactcgtccccggcgaggtacttgtt---gcgggccaggtgcgcct 504

                           
Query: 397 cgtatacgtcgagcac 412
           |||| |||||||||||
Sbjct: 503 cgtacacgtcgagcac 488



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                       
Query: 204 gcggcgacggtcttcttccaggcggggcgggcggagatctcgtcccaccacgcctgcacg 263
           ||||||||||||||||   | ||||||||||||| |||  | |||||||| ||||  |||
Sbjct: 690 gcggcgacggtcttctggaacgcggggcgggcggcgatggcctcccaccaggccttgacg 631

                                
Query: 264 tgcggcctggcggccacgagc 284
           || || | |||||| ||||||
Sbjct: 630 tgggggcgggcggcgacgagc 610
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>emb|X04455.1|ZMGGST3B Maize mRNA for glutathione-S-transferase GSTIII (clone GSTIIIB)
          Length = 859

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 64/76 (84%), Gaps = 4/76 (5%)
 Strand = Plus / Minus

                                                                       
Query: 337 cgtcggcgagagtgaactgctcgccggcgaggtacctgttcccggcggcgaggtgcgcgt 396
           |||||||||| |||||||  || |||||||||||| ||||   |  |||||||||||| |
Sbjct: 525 cgtcggcgagcgtgaactcgtccccggcgaggtacttgtt---gcgggcgaggtgcgc-t 470

                           
Query: 397 cgtatacgtcgagcac 412
           |||| |||||||||||
Sbjct: 469 cgtacacgtcgagcac 454
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>emb|X06755.1|ZMGST3 Maize mRNA for GSH gluthathione S-transferase III (GST;EC 2.5.1.18)
          Length = 913

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 63/76 (82%), Gaps = 3/76 (3%)
 Strand = Plus / Minus

                                                                       
Query: 337 cgtcggcgagagtgaactgctcgccggcgaggtacctgttcccggcggcgaggtgcgcgt 396
           |||||||||| |||||||  || |||||||||||| ||||   |  ||| |||||||| |
Sbjct: 573 cgtcggcgagcgtgaactcgtccccggcgaggtacttgtt---gcgggccaggtgcgcct 517

                           
Query: 397 cgtatacgtcgagcac 412
           |||| |||||||||||
Sbjct: 516 cgtacacgtcgagcac 501
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>emb|X04375.1|ZMGST3A Maize mRNA for glutathione-S-transferase GSTIII (clone GSTIIIA)
          Length = 840

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 64/76 (84%), Gaps = 4/76 (5%)
 Strand = Plus / Minus

                                                                       
Query: 337 cgtcggcgagagtgaactgctcgccggcgaggtacctgttcccggcggcgaggtgcgcgt 396
           |||||||||| |||||||  || |||||||||||| ||||   |  |||||||||||| |
Sbjct: 506 cgtcggcgagcgtgaactcgtccccggcgaggtacttgtt---gcgggcgaggtgcgc-t 451

                           
Query: 397 cgtatacgtcgagcac 412
           |||| |||||||||||
Sbjct: 450 cgtacacgtcgagcac 435
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>emb|AJ010296.1|ZMA010296 Zea mays mRNA for glutathione transferase III(b)
          Length = 944

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 63/76 (82%), Gaps = 3/76 (3%)
 Strand = Plus / Minus

                                                                       
Query: 337 cgtcggcgagagtgaactgctcgccggcgaggtacctgttcccggcggcgaggtgcgcgt 396
           |||||||||| |||||||  || |||||||||||| ||||   |  ||| |||||||| |
Sbjct: 564 cgtcggcgagcgtgaactcgtccccggcgaggtacttgtt---gcgggccaggtgcgcct 508

                           
Query: 397 cgtatacgtcgagcac 412
           |||| |||||||||||
Sbjct: 507 cgtacacgtcgagcac 492



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                       
Query: 204 gcggcgacggtcttcttccaggcggggcgggcggagatctcgtcccaccacgcctgcacg 263
           ||||||||||||||||   | ||||||||||||| |||  | |||||||| ||||  |||
Sbjct: 694 gcggcgacggtcttctggaacgcggggcgggcggcgatggcctcccaccaggccttgacg 635

                                
Query: 264 tgcggcctggcggccacgagc 284
           || || | |||||| ||||||
Sbjct: 634 tgggggcgggcggcgacgagc 614
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>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete
              sequence
          Length = 138824

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 338    gtcggcgagagtgaactgctcgccggcgaggtac 371
              ||||||||| |||||||  |||||||||||||||
Sbjct: 114325 gtcggcgagggtgaacttgtcgccggcgaggtac 114358
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 338      gtcggcgagagtgaactgctcgccggcgaggtac 371
                ||||||||| |||||||  |||||||||||||||
Sbjct: 20712873 gtcggcgagggtgaacttgtcgccggcgaggtac 20712906
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 377     cccggcggcgaggtgcgcgtcg 398
               ||||||||||||||||||||||
Sbjct: 4959307 cccggcggcgaggtgcgcgtcg 4959286
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>dbj|AB103350.1| Oryza sativa (japonica cultivar-group) GST mRNA for glutathione
           S-transferase, complete cd
          Length = 1238

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 338 gtcggcgagagtgaactgctcgccggcgaggtac 371
           ||||||||| |||||||  |||||||||||||||
Sbjct: 756 gtcggcgagggtgaacttgtcgccggcgaggtac 723
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>dbj|AK068795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169J03, full
            insert sequence
          Length = 2516

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 136  aacattatacagtacaccttta 157
            ||||||||||||||||||||||
Sbjct: 2141 aacattatacagtacaccttta 2120
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>gb|AY105647.1| Zea mays PCO132886 mRNA sequence
          Length = 1003

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 63/76 (82%), Gaps = 3/76 (3%)
 Strand = Plus / Minus

                                                                       
Query: 337 cgtcggcgagagtgaactgctcgccggcgaggtacctgttcccggcggcgaggtgcgcgt 396
           |||||||||| |||||||  || |||||||||||| ||||   |  ||| |||||||| |
Sbjct: 643 cgtcggcgagcgtgaactcgtccccggcgaggtacttgtt---gcgggccaggtgcgcct 587

                           
Query: 397 cgtatacgtcgagcac 412
           |||| |||||||||||
Sbjct: 586 cgtacacgtcgagcac 571



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                       
Query: 204 gcggcgacggtcttcttccaggcggggcgggcggagatctcgtcccaccacgcctgcacg 263
           ||||||||||||||||   | ||||||||||||| |||  | |||||||| ||||  |||
Sbjct: 773 gcggcgacggtcttctggaacgcggggcgggcggcgatggcctcccaccaggccttgacg 714

                                
Query: 264 tgcggcctggcggccacgagc 284
           || || | |||||| ||||||
Sbjct: 713 tgggggcgggcggcgacgagc 693
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 338      gtcggcgagagtgaactgctcgccggcgaggtac 371
                ||||||||| |||||||  |||||||||||||||
Sbjct: 20724145 gtcggcgagggtgaacttgtcgccggcgaggtac 20724178
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>gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequence
          Length = 184338

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 394    cgtcgtatacgtcgagcacgtcggc 418
              ||||||||||| |||||||||||||
Sbjct: 140295 cgtcgtatacgccgagcacgtcggc 140271
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>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 406     cgagcacgtcggccaccttgccgg 429
               |||||| |||||||||||||||||
Sbjct: 1997680 cgagcaggtcggccaccttgccgg 1997703
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>ref|XM_470191.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 678

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 338 gtcggcgagagtgaactgctcgccggcgaggtacctgttc 377
           |||||| || |||||||  ||||||||||||||| |||||
Sbjct: 507 gtcggccagggtgaactcgtcgccggcgaggtacttgttc 468
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>ref|XM_507407.1| PREDICTED Oryza sativa (japonica cultivar-group), P0625E02.105 mRNA
          Length = 2058

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 361 cggcgaggtacctgttcccggcggcgag 388
           |||||| ||||||| |||||||||||||
Sbjct: 239 cggcgaagtacctgctcccggcggcgag 212
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>ref|NM_186107.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1627

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 361 cggcgaggtacctgttcccggcggcgag 388
           |||||| ||||||| |||||||||||||
Sbjct: 247 cggcgaagtacctgctcccggcggcgag 220
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>ref|XM_506553.2| PREDICTED Oryza sativa (japonica cultivar-group), P0625E02.105 mRNA
          Length = 2368

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 361 cggcgaggtacctgttcccggcggcgag 388
           |||||| ||||||| |||||||||||||
Sbjct: 251 cggcgaagtacctgctcccggcggcgag 224
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 406     cgagcacgtcggccaccttg 425
               ||||||||||||||||||||
Sbjct: 3772690 cgagcacgtcggccaccttg 3772709
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     cggggcgggcggagatctcg 245
               ||||||||||||||||||||
Sbjct: 1453948 cggggcgggcggagatctcg 1453967
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>gb|AY533123.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase
           GSTF15 mRNA, complete cds
          Length = 678

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 338 gtcggcgagagtgaactgctcgccggcgaggtacctgttc 377
           |||||| || |||||||  ||||||||||||||| |||||
Sbjct: 507 gtcggccagggtgaactcgtcgccggcgaggtacttgttc 468
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 30      attgccttggcaaacagttt 49
               ||||||||||||||||||||
Sbjct: 5194956 attgccttggcaaacagttt 5194937
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 338     gtcggcgagagtgaactgctcgccggcgaggtacctgttc 377
               |||||| || |||||||  ||||||||||||||| |||||
Sbjct: 1929173 gtcggccagggtgaactcgtcgccggcgaggtacttgttc 1929212
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>ref|XM_755540.1| Ustilago maydis 521 hypothetical protein (UM04486.1) partial mRNA
          Length = 3528

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 317  cagctgcgcaatgtggttca 336
            ||||||||||||||||||||
Sbjct: 1794 cagctgcgcaatgtggttca 1775
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>gb|AC073094.11| Homo sapiens BAC clone RP11-369D24 from 7, complete sequence
          Length = 189126

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 269   cctggcggccacgagctccg 288
             ||||||||||||||||||||
Sbjct: 51134 cctggcggccacgagctccg 51153
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>emb|AL591431.8| Human DNA sequence from clone RP11-1057F13 on chromosome Xq21.1-21.2
             Contains the 5' end of a novel pseudogene, gene MGC26999
             and a CpG island, complete sequence
          Length = 151017

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 15    caaagaagccacaacattgccttg 38
             |||||||||||||||||| |||||
Sbjct: 68084 caaagaagccacaacattcccttg 68061
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>emb|AL512592.14| Human DNA sequence from clone RP11-35D6 on chromosome 6 Contains part
             of a novel gene (FLJ00197), complete sequence
          Length = 60858

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 117   atcatctgctcctgctaaaa 136
             ||||||||||||||||||||
Sbjct: 45537 atcatctgctcctgctaaaa 45556
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>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06,
             complete sequence
          Length = 122218

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 338   gtcggcgagagtgaactgctcgccggcgaggtacctgttc 377
             |||||| || |||||||  ||||||||||||||| |||||
Sbjct: 46238 gtcggccagggtgaactcgtcgccggcgaggtacttgttc 46199
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>emb|BX842582.1| Mycobacterium tuberculosis H37Rv complete genome; segment 11/13
          Length = 349563

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    cgagcacgtcggccaccttg 425
              ||||||||||||||||||||
Sbjct: 312794 cgagcacgtcggccaccttg 312813
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>emb|BX248345.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 12/14
          Length = 308050

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 406    cgagcacgtcggccaccttg 425
              ||||||||||||||||||||
Sbjct: 291097 cgagcacgtcggccaccttg 291116
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 407    gagcacgtcggccaccttgccggcgagc 434
              |||| |||||||||||||||||| ||||
Sbjct: 897569 gagctcgtcggccaccttgccggtgagc 897542
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>gb|AC151614.2| Emiliania huxleyi clone JGIACCU-13K1, complete sequence
          Length = 42022

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    cactcacatcaacaacatta 104
             ||||||||||||||||||||
Sbjct: 10353 cactcacatcaacaacatta 10372
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 160     ccgcaccttgccaccggcgtcatc 183
               |||| |||||||||||||||||||
Sbjct: 3828501 ccgcgccttgccaccggcgtcatc 3828524
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>gb|AE016814.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome I,
              complete sequence
          Length = 691920

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    ggagatctcgtcccaccacg 255
              ||||||||||||||||||||
Sbjct: 291122 ggagatctcgtcccaccacg 291103
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 361      cggcgaggtacctgttcccggcggcgag 388
                |||||| ||||||| |||||||||||||
Sbjct: 28194012 cggcgaagtacctgctcccggcggcgag 28193985
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                       
Query: 338     gtcggcgagagtgaactgctcgccggcgaggtacctgttc 377
               |||||| || |||||||  ||||||||||||||| |||||
Sbjct: 1929171 gtcggccagggtgaactcgtcgccggcgaggtacttgttc 1929210
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>gb|AC154320.2| Mus musculus BAC clone RP23-308E16 from chromosome 13, complete
             sequence
          Length = 202134

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   gcgggagggggagcgcggcg 209
             ||||||||||||||||||||
Sbjct: 98685 gcgggagggggagcgcggcg 98666
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>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0625E02
          Length = 153921

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 361   cggcgaggtacctgttcccggcggcgag 388
             |||||| ||||||| |||||||||||||
Sbjct: 49557 cggcgaagtacctgctcccggcggcgag 49530
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>dbj|AK110228.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-E12, full
           insert sequence
          Length = 4976

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 gccaccggcgtcatcaagcc 188
           ||||||||||||||||||||
Sbjct: 971 gccaccggcgtcatcaagcc 952
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>dbj|AK105114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G09, full
           insert sequence
          Length = 2058

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 361 cggcgaggtacctgttcccggcggcgag 388
           |||||| ||||||| |||||||||||||
Sbjct: 239 cggcgaagtacctgctcccggcggcgag 212
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>dbj|AK103292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125A06, full
           insert sequence
          Length = 2370

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 361 cggcgaggtacctgttcccggcggcgag 388
           |||||| ||||||| |||||||||||||
Sbjct: 251 cggcgaagtacctgctcccggcggcgag 224
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>ref|NM_207866.1| Eremothecium gossypii AAL029Wp (AAL029W), mRNA
          Length = 1605

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 236  ggagatctcgtcccaccacg 255
            ||||||||||||||||||||
Sbjct: 1134 ggagatctcgtcccaccacg 1115
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 412     cgtcggccaccttgccggcg 431
               ||||||||||||||||||||
Sbjct: 3130031 cgtcggccaccttgccggcg 3130012
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>dbj|AK063550.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-D12, full
           insert sequence
          Length = 1627

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 361 cggcgaggtacctgttcccggcggcgag 388
           |||||| ||||||| |||||||||||||
Sbjct: 247 cggcgaagtacctgctcccggcggcgag 220
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>dbj|AK059955.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D02, full
           insert sequence
          Length = 951

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 338 gtcggcgagagtgaactgctcgccggcgaggtacctgttc 377
           |||||| || |||||||  ||||||||||||||| |||||
Sbjct: 615 gtcggccagggtgaactcgtcgccggcgaggtacttgttc 576
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>gb|AY108505.1| Zea mays PCO143785 mRNA sequence
          Length = 812

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 271 tggcggccacgagctccgcc 290
           ||||||||||||||||||||
Sbjct: 84  tggcggccacgagctccgcc 103
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>emb|BX294124.8| Mouse DNA sequence from clone RP23-80H12 on chromosome X, complete
             sequence
          Length = 181854

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 19    gaagccacaacattgccttggcaaacag 46
             |||||| |||||||||||| ||||||||
Sbjct: 13851 gaagcctcaacattgccttagcaaacag 13824


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,356,285
Number of Sequences: 3902068
Number of extensions: 3356285
Number of successful extensions: 103231
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102138
Number of HSP's gapped (non-prelim): 1093
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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