>NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor (EC 3.4.23.-)|
           (Nepenthesin-II)
          Length = 438

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
 Frame = -3

Query: 496 GAVMDSGAVVTQLPPQVYXXXXXXXXXXXXAYGPLAAPVRNLDTCYDF-TRFPDVKVPKV 320
           G ++DSG  +T LP   Y                +      L TC+   +    V+VP++
Sbjct: 311 GMIIDSGTTLTYLPQDAYNAVAQAFTDQINL-PTVDESSSGLSTCFQQPSDGSTVQVPEI 369

Query: 319 SLVFAGGATLDLEPASIILDG-----CLAFAATPGEESVGFIGNVQQQTYEVLYDVGGGK 155
           S+ F GG  L+L   +I++       CLA  ++  +  +   GN+QQQ  +VLYD+    
Sbjct: 370 SMQFDGGV-LNLGEQNILISPAEGVICLAMGSS-SQLGISIFGNIQQQETQVLYDLQNLA 427

Query: 154 VGFRRGAC 131
           V F    C
Sbjct: 428 VSFVPTQC 435

>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)|
           (Nepenthesin-I)
          Length = 437

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 9/131 (6%)
 Frame = -3

Query: 496 GAVMDSGAVVTQLPPQVYXXXXXXXXXXXXAYGPLAAPVRN-----LDTCYDFTRFP-DV 335
           G ++DSG  +T      Y                +  PV N      D C+     P ++
Sbjct: 311 GIIIDSGTTLTYFVNNAYQSVRQEFISQ------INLPVVNGSSSGFDLCFQTPSDPSNL 364

Query: 334 KVPKVSLVFAGGATLDLEPASIIL---DGCLAFAATPGEESVGFIGNVQQQTYEVLYDVG 164
           ++P   + F GG  L+L   +  +   +G +  A     + +   GN+QQQ   V+YD G
Sbjct: 365 QIPTFVMHFDGG-DLELPSENYFISPSNGLICLAMGSSSQGMSIFGNIQQQNMLVVYDTG 423

Query: 163 GGKVGFRRGAC 131
              V F    C
Sbjct: 424 NSVVSFASAQC 434

>ASPP_AEDAE (Q03168) Lysosomal aspartic protease precursor (EC 3.4.23.-)|
          Length = 387

 Score = 35.4 bits (80), Expect = 0.088
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 11/91 (12%)
 Frame = -3

Query: 385 PVRNLDTCYDFTRFPDVKVPKVSLVFAGGATLDLEPA-----------SIILDGCLAFAA 239
           P+ N +   D +  P  K+PK+S V  GG + DLE A           +I L G +    
Sbjct: 296 PIMNGEYMVDCSLIP--KLPKISFVL-GGKSFDLEGADYVLRVAQMGKTICLSGFMGIDI 352

Query: 238 TPGEESVGFIGNVQQQTYEVLYDVGGGKVGF 146
            P    +  +G+V    Y   +D+G  +VGF
Sbjct: 353 PPPNGPLWILGDVFIGKYYTEFDMGNDRVGF 383

>PEPC_CALJA (Q9N2D3) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
          Length = 388

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
 Frame = -3

Query: 493 AVMDSGAVVTQLPPQVYXXXXXXXXXXXXAYGPLAA---PVRNLDTCYDFTRFPDVKVPK 323
           A++D+G  +  +P Q               YG        ++NL T        +  +P 
Sbjct: 273 AIVDTGTSLLTVPQQYMSAFLEATGAQEDEYGQFLVNCDSIQNLPTLTFIINGVEFPLPP 332

Query: 322 VSLVFA--GGATLDLEPASIILDGCLAFAATPGEESVGFIGNVQQQTYEVLYDVGGGKVG 149
            S + +  G  T+ +EP          + ++   + +  +G+V  ++Y  ++D+G  +VG
Sbjct: 333 SSYILSNNGYCTVGVEPT---------YLSSQNSQPLWILGDVFLRSYYSVFDLGNNRVG 383

Query: 148 FRRGA 134
           F   A
Sbjct: 384 FATAA 388

>PEPC_HUMAN (P20142) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
          Length = 388

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
 Frame = -3

Query: 493 AVMDSGAVVTQLPPQVYXXXXXXXXXXXXAYGPLAA---PVRNLDTCYDFTRFPDVKVPK 323
           A++D+G  +  +P Q               YG        ++NL +        +  +P 
Sbjct: 273 AIVDTGTSLLTVPQQYMSALLQATGAQEDEYGQFLVNCNSIQNLPSLTFIINGVEFPLPP 332

Query: 322 VSLVFA--GGATLDLEPASIILDGCLAFAATPGEESVGFIGNVQQQTYEVLYDVGGGKVG 149
            S + +  G  T+ +EP          + ++   + +  +G+V  ++Y  +YD+G  +VG
Sbjct: 333 SSYILSNNGYCTVGVEPT---------YLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVG 383

Query: 148 FRRGA 134
           F   A
Sbjct: 384 FATAA 388

>PEPC_SUNMU (P81498) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C-1)|
          Length = 389

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 25/128 (19%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
 Frame = -3

Query: 493 AVMDSGAVVTQLPPQVYXXXXXXXXXXXXAYGPLAAPVRNLDTCYDFTRFPDVKVPKVSL 314
           A++D+G  +  +P Q               YG LA    ++ +           +P ++ 
Sbjct: 274 AIVDTGTSLLTVPQQFMSALQQATGAQQDQYGQLAVNCNSIQS-----------LPTLTF 322

Query: 313 VFAGGATLDLEPASIILDG---CL-----AFAATPGEESVGFIGNVQQQTYEVLYDVGGG 158
           +   G    L P++ +L+    C       +  +   + +  +G+V  ++Y  +YD+G  
Sbjct: 323 II-NGVQFPLPPSAYVLNTNGYCFLGVEPTYLPSQNGQPLWILGDVFLRSYYSVYDMGNN 381

Query: 157 KVGFRRGA 134
           +VGF   A
Sbjct: 382 RVGFATAA 389

>PEPC_CAVPO (Q64411) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
          Length = 394

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
 Frame = -3

Query: 331 VPKVSLVFAGGATLDLEPASIILDG---CLA-----FAATPGEESVGFIGNVQQQTYEVL 176
           +P ++ V +G     L P++ IL G   C+      + +  G E V  +G+V  ++Y  +
Sbjct: 322 LPTLTFVISG-VEFPLSPSAYILSGENYCMVGLESTYVSPGGGEPVWILGDVFLRSYYSV 380

Query: 175 YDVGGGKVGFRRGA 134
           YD+   +VGF   A
Sbjct: 381 YDLANNRVGFATAA 394

>LIMD1_HUMAN (Q9UGP4) LIM domains-containing protein 1|
          Length = 676

 Score = 32.0 bits (71), Expect = 0.97
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +1

Query: 235 GWPRTPGSHPKLWKPVRDPRWHHQRIREKPLGPSHQGSG*SRSMCRGCARGPPVG 399
           GWP +PGS P L KP  D   +H+++       S    G   S   G +   P G
Sbjct: 207 GWPSSPGSDPPLPKPCGDHPLNHRQLSLSSSRSSEGSLGGQNSGIGGRSSEKPTG 261

>HAIR_HUMAN (O43593) Protein hairless|
          Length = 1189

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 16/99 (16%)
 Frame = +3

Query: 63  ACIPQ-IHTIGPSHDWLSC---NLPHQHAPRRNPTLPPPTSYRTS*VCCCTLPMNPT--- 221
           AC P  +HT+G  + W      NL +Q  P   P  P P    T   CC + P  PT   
Sbjct: 281 ACPPGLVHTLG--NVWAGPGDGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYP--PTKGG 336

Query: 222 DSSP---------GVAANARQPSKIMEAGSRSKVAPPAN 311
           D  P         G A+ A +PS+ +   S  +  PP++
Sbjct: 337 DLGPCGKCQEGLEGGASGASEPSEEVNKASGPRACPPSH 375

>PEPC_SORUN (Q9GMY4) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
          Length = 389

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 5/125 (4%)
 Frame = -3

Query: 493 AVMDSGAVVTQLPPQVYXXXXXXXXXXXXAYGPLAAPVRNLDTCYDFTRFPD-VKVPKVS 317
           A++D+G  +  +P Q                G +     N+      T   + V+ P + 
Sbjct: 274 AIVDTGTSLLTVPQQYLSALQQATGAQLDQDGQMVVNCNNIQNLPTLTFVINGVQFPLLP 333

Query: 316 LVFA----GGATLDLEPASIILDGCLAFAATPGEESVGFIGNVQQQTYEVLYDVGGGKVG 149
             +     G  TL +EP          +  +P  + +  +G+V  ++Y  +YD+G  +VG
Sbjct: 334 SAYVLNNNGYCTLGVEPT---------YLPSPTGQPLWILGDVFLRSYYSVYDMGNNRVG 384

Query: 148 FRRGA 134
           F   A
Sbjct: 385 FATAA 389

>PEPC_MACFU (P03955) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
           (Fragment)
          Length = 377

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 5/125 (4%)
 Frame = -3

Query: 493 AVMDSGAVVTQLPPQVYXXXXXXXXXXXXAYGPLAA---PVRNLDTCYDFTRFPDVKVPK 323
           A++D+G  +  +P Q               YG        ++NL T        +  +P 
Sbjct: 262 AIVDTGTSLLTVPQQYMSALLQATGAQEDEYGQFLVNCNSIQNLPTLTFIINGVEFPLPP 321

Query: 322 VSLVFA--GGATLDLEPASIILDGCLAFAATPGEESVGFIGNVQQQTYEVLYDVGGGKVG 149
            S +    G  T+ +EP          + +    + +  +G+V  ++Y  +YD+   +VG
Sbjct: 322 SSYILNNNGYCTVGVEPT---------YLSAQNSQPLWILGDVFLRSYYSVYDLSNNRVG 372

Query: 148 FRRGA 134
           F   A
Sbjct: 373 FATAA 377

>CIC_DROME (Q9U1H0) Putative transcription factor capicua (Protein fettucine)|
          Length = 1403

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +3

Query: 126  HQHAPRRNPTLPPPTSYRTS*VCCCTLPMNPTDSSPGVAANARQPSKIMEAGSRSKVA 299
            H ++   +  LP PTS  T+      LP+ PT SS     N +QP   M+    S  A
Sbjct: 1116 HVNSSNLSSALPTPTSSTTTPNSDEQLPLTPTTSSSNSNLNQQQPKSPMKGAPGSTAA 1173

>COBT_RHIME (Q92P98) Nicotinate-nucleotide--dimethylbenzimidazole|
           phosphoribosyltransferase (EC 2.4.2.21) (NN:DBI PRT)
           (N(1)-alpha-phosphoribosyltransferase)
          Length = 338

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = -1

Query: 306 LVVPPWISNRLP*--FWMAAWRSRPPPVKNP 220
           L  PP    RL    FW+AAW  RPP V  P
Sbjct: 36  LTKPPGALGRLEEIAFWLAAWTGRPPAVNRP 66

>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +3

Query: 138  PRRNPTLPPPTSYRTS*VCCCTLPMNPTDSSPGVAANARQPSKIMEAGSRSKVAPPANT 314
            P    T PPPT+  +  +   T P+  T  SP ++     P     +   +  +PP  T
Sbjct: 1425 PTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTT 1483

>PEPC_RHIFE (Q9GMY3) Gastricsin precursor (EC 3.4.23.3) (Pepsinogen C)|
          Length = 389

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 5/125 (4%)
 Frame = -3

Query: 493 AVMDSGAVVTQLPPQVYXXXXXXXXXXXXAYGPLAAP---VRNLDTCYDFTRFPDVKVPK 323
           A++D+G  +  +P Q               YG        ++NL T           +P 
Sbjct: 274 AIVDTGTSLLTVPQQYMSALLQATGAQEDQYGQFFVNCNYIQNLPTFTFIINGVQFPLPP 333

Query: 322 VSLVFA--GGATLDLEPASIILDGCLAFAATPGEESVGFIGNVQQQTYEVLYDVGGGKVG 149
            S +    G  T+ +EP          +  +   + +  +G+V  ++Y  +YD+G  +VG
Sbjct: 334 SSYILNNNGYCTVGVEPT---------YLPSQNGQPLWILGDVFLRSYYSVYDMGNNRVG 384

Query: 148 FRRGA 134
           F   A
Sbjct: 385 FATAA 389

>ASPRX_ORYSA (P42211) Aspartic proteinase precursor (EC 3.4.23.-)|
          Length = 496

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = -3

Query: 274 SIILDGCLAFAATPGEESVGFIGNVQQQTYEVLYDVGGGKVGFRRGA 134
           ++ + G +AF   P    +  +G+V    Y  ++D G  ++GF + A
Sbjct: 450 TVCISGFMAFDIPPPRGPLWILGDVFMGAYHTVFDFGKDRIGFAKSA 496

>RCOR2_XENLA (Q6NRZ0) REST corepressor 2|
          Length = 503

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 21/62 (33%), Positives = 26/62 (41%)
 Frame = +3

Query: 123 PHQHAPRRNPTLPPPTSYRTS*VCCCTLPMNPTDSSPGVAANARQPSKIMEAGSRSKVAP 302
           P   A   + +LPPP   R +  C  TL   P    PG     R P  +  A  +S  AP
Sbjct: 432 PPAAAAAASLSLPPPL-LRPAIPCAPTLHRQPPPLQPGRLLQPRPPPLVRPAPRQSPRAP 490

Query: 303 PA 308
           PA
Sbjct: 491 PA 492

>H1_CHICK (P09987) Histone H1|
          Length = 217

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 18/63 (28%), Positives = 28/63 (44%)
 Frame = +3

Query: 216 PTDSSPGVAANARQPSKIMEAGSRSKVAPPANTRETFGTFTSGKRVKS*HVSRLRTGAAS 395
           P  S+PG  A A++P K        K A P+ T       ++ K  K   ++ L+   A+
Sbjct: 9   PAVSAPGAKAAAKKPKKAAGGAKPRKPAGPSVTELITKAVSASKERKGLSLAALKKALAA 68

Query: 396 GPY 404
           G Y
Sbjct: 69  GGY 71

>SNPH_HUMAN (O15079) Syntaphilin|
          Length = 538

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 207 PMNPTDSSPGVAANARQPSKIMEAGSRSKVAPPANTRETFGT 332
           P+ P   +  + A +   S+   AGSR + +PP + R+ +GT
Sbjct: 34  PIPPLTRTHSLMAMSLPGSRRTSAGSRRRTSPPVSVRDAYGT 75

>CFAH_BOVIN (Q28085) Complement factor H (H factor 1) (Fragments)|
          Length = 685

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 492 R*WTPAQLSRSCHHKCTLHCEPPSEAPWQHMA 397
           R + PA++++   + C  H  PPS+  W H+A
Sbjct: 265 RGYFPARVNQQFVYSCDHHFVPPSQRSWDHLA 296

>RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1|
          Length = 334

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 2/106 (1%)
 Frame = +1

Query: 184 RKSAAAHCR*TRRILHRGWPRTPGSHPKLWKPVRDPRWH--HQRIREKPLGPSHQGSG*S 357
           R+S+++    +R    +   R P S  + W   R PR H   +R R +    S  GS   
Sbjct: 22  RRSSSSSSSDSRTYSRKKGGRRPRSESRSWSRDRQPRSHSYERRRRRRSSSSSSYGSRRK 81

Query: 358 RSMCRGCARGPPVGHMLPWRF*RRLAVQRTLVVAAA*QLRRSPSPR 495
           RS  R   RG            +   VQR+   +   + R  P PR
Sbjct: 82  RSRSRSRGRG------------KSYRVQRSRSKSRTRRSRSRPRPR 115

>SECR_HUMAN (P09683) Secretin precursor|
          Length = 121

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +3

Query: 267 IMEAGSRSKVAPPANTRETFGTFTSGKRVKS*HVSRLRTGA 389
           ++  GS ++ APP   R + GTFTS        +SRLR GA
Sbjct: 11  LLLGGSAARPAPPRARRHSDGTFTS-------ELSRLREGA 44

>CUTL1_HUMAN (P39880) Homeobox protein cut-like 1 (CCAAT displacement protein)|
           (CDP)
          Length = 1505

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 201 TLPMNPTDSSPGVAANARQPSKIMEAGSRSKVAPPANTRE 320
           T PM    S P +A + ++PS   EAG+ +   PPA  +E
Sbjct: 748 TSPMPTVSSYPPLAISLKKPSAAPEAGASALPNPPALKKE 787

>ARGB_SYNEL (P59303) Acetylglutamate kinase (EC 2.7.2.8) (NAG kinase) (AGK)|
           (N-acetyl-L-glutamate 5-phosphotransferase)
          Length = 295

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -3

Query: 262 DGCLAFAATPGEESVGFIGNVQ 197
           DG L  A   GEES+GF+G VQ
Sbjct: 126 DGNLIRARAKGEESIGFVGEVQ 147

>YKC2_CAEEL (P41993) Hypothetical protein B0280.2|
          Length = 627

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
 Frame = +3

Query: 93  PSHDWLSCNLPHQHAPRRNPTLPPPTSYRTS*VCCCTLPMNPTDSSPGVAAN---ARQPS 263
           P+H   S   P   AP R P  P P    ++ +C       PT S+P    N   A  P+
Sbjct: 386 PNHTHCS-EKPIAEAPLRPPVRPAPIVPTSAGLCLVLAASFPTSSTPSRFLNPFPAPLPA 444

Query: 264 KIMEAGSRSKVA 299
           +     S+SK+A
Sbjct: 445 ESFFGNSKSKIA 456


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,967,133
Number of Sequences: 219361
Number of extensions: 1962207
Number of successful extensions: 5645
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5642
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)