ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart19a07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 158 gccgccgccgacgtcgtatagaacttcgtaagtctgctgctgcacattgccgatgaaccc 217 |||||||||||||||||| || || |||| |||||||||||||| || |||||||| || Sbjct: 1154099 gccgccgccgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagcc 1154040 Query: 218 ga 219 || Sbjct: 1154039 ga 1154038 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 158 gccgccgccgacgtcgtatagaacttcgtaagtctgctgctgcacattgccgatgaaccc 217 ||||||| |||||||||| || || |||| |||||||||||||| || |||||||| || Sbjct: 1137553 gccgccgacgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagcc 1137494 Query: 218 ga 219 || Sbjct: 1137493 ga 1137492 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 1063113 ggtgaagtcgtagcaggtgtcgagg 1063137 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 1061852 ggtgaagtcgtagcacgtgtcgagg 1061876 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ccaccttgccgccgccgacgtcgt 174 ||||||||||||||||| |||||| Sbjct: 12027232 ccaccttgccgccgccgccgtcgt 12027255 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgag 373 ||||||||||||||| |||||||| Sbjct: 11426964 ggtgaagtcgtagcacgtgtcgag 11426941
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 158 gccgccgccgacgtcgtatagaacttcgtaagtctgctgctgcacattgccgatgaaccc 217 |||||||||||||||||| || || |||| |||||||||||||| || |||||||| || Sbjct: 130322 gccgccgccgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagcc 130263 Query: 218 ga 219 || Sbjct: 130262 ga 130261 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 158 gccgccgccgacgtcgtatagaacttcgtaagtctgctgctgcacattgccgatgaaccc 217 ||||||| |||||||||| || || |||| |||||||||||||| || |||||||| || Sbjct: 113776 gccgccgacgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagcc 113717 Query: 218 ga 219 || Sbjct: 113716 ga 113715 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 39336 ggtgaagtcgtagcaggtgtcgagg 39360 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 38075 ggtgaagtcgtagcacgtgtcgagg 38099
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 60.0 bits (30), Expect = 7e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 158 gccgccgccgacgtcgtatagaacttcgtaagtctgctgctgcacattgccgatgaaccc 217 |||||||||||||||||| || || |||| |||||||||||||| || |||||||| || Sbjct: 6052 gccgccgccgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagcc 5993 Query: 218 ga 219 || Sbjct: 5992 ga 5991
>dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E01, full insert sequence Length = 1389 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 158 gccgccgccgacgtcgtatagaacttcgtaagtctgctgctgcacattgccgatgaaccc 217 ||||||| |||||||||| || || |||| |||||||||||||| || |||||||| || Sbjct: 1312 gccgccgacgacgtcgtagagcacctcgtgcgtctgctgctgcacgttcccgatgaagcc 1253 Query: 218 ga 219 || Sbjct: 1252 ga 1251
>ref|NM_192718.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1413 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Minus Query: 158 gccgccgccgacgtcgtatagaacttcgtaagtctgctgctgcacattgccgatg 212 |||||||||||||||||| || || ||| | || |||||||||| ||||||||| Sbjct: 1383 gccgccgccgacgtcgtacaggacctcgaacgtgcgctgctgcacgttgccgatg 1329
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Minus Query: 158 gccgccgccgacgtcgtatagaacttcgtaagtctgctgctgcacattgccgatg 212 |||||||||||||||||| || || ||| | || |||||||||| ||||||||| Sbjct: 24016022 gccgccgccgacgtcgtacaggacctcgaacgtgcgctgctgcacgttgccgatg 24015968
>dbj|AP003216.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0090K04 Length = 152556 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Minus Query: 158 gccgccgccgacgtcgtatagaacttcgtaagtctgctgctgcacattgccgatg 212 |||||||||||||||||| || || ||| | || |||||||||| ||||||||| Sbjct: 130544 gccgccgccgacgtcgtacaggacctcgaacgtgcgctgctgcacgttgccgatg 130490
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 228 tcaccgggggtggccgcgaacgccag 253 ||||||| |||||||||||||||||| Sbjct: 2348786 tcaccggcggtggccgcgaacgccag 2348811
>ref|XM_482275.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2499 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 ccttgccgccgccgacgtcgt 174 ||||||||||||||||||||| Sbjct: 475 ccttgccgccgccgacgtcgt 455
>ref|XM_550548.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1886 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 1337 ggtgaagtcgtagcaggtgtcgagg 1313
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 8414 ggtgaagtcgtagcacgtgtcgagg 8390
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 18480408 ggtgaagtcgtagcacgtgtcgagg 18480384 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 18468949 ggtgaagtcgtagcacgtgtcgagg 18468925
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 ccttgccgccgccgacgtcgt 174 ||||||||||||||||||||| Sbjct: 19168557 ccttgccgccgccgacgtcgt 19168577
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 142282 ggtgaagtcgtagcacgtgtcgagg 142258 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 130823 ggtgaagtcgtagcacgtgtcgagg 130799
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J13 Length = 152837 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 125986 ggtgaagtcgtagcaggtgtcgagg 126010 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 124725 ggtgaagtcgtagcacgtgtcgagg 124749
>dbj|AP005388.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0086F04 Length = 163579 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 154 ccttgccgccgccgacgtcgt 174 ||||||||||||||||||||| Sbjct: 90922 ccttgccgccgccgacgtcgt 90942
>dbj|AK108029.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-B01, full insert sequence Length = 1723 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 636 ggtgaagtcgtagcacgtgtcgagg 660
>dbj|AK105666.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H10, full insert sequence Length = 1608 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 1305 ggtgaagtcgtagcacgtgtcgagg 1281
>dbj|AK104685.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-C01, full insert sequence Length = 1886 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 1337 ggtgaagtcgtagcaggtgtcgagg 1313
>dbj|AK066409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067G18, full insert sequence Length = 1900 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgagg 374 ||||||||||||||| ||||||||| Sbjct: 1329 ggtgaagtcgtagcaggtgtcgagg 1305
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 484 ccatcaccgcgccggtggcga 504 ||||||||||||||||||||| Sbjct: 2863481 ccatcaccgcgccggtggcga 2863461
>ref|NM_194582.1| Oryza sativa (japonica cultivar-group) putative NADPH-dependent oxidoreductase (OSJNBb0012A20.19), mRNA Length = 969 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cgccggagtccatcaccgcg 494 |||||||||||||||||||| Sbjct: 703 cgccggagtccatcaccgcg 684
>ref|XM_464776.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ccaccttgccgccgccgacg 170 |||||||||||||||||||| Sbjct: 28 ccaccttgccgccgccgacg 9
>gb|AC149375.2| Phakopsora pachyrhizi clone JGIAFNA-5A12, complete sequence Length = 34839 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttccatttattt 32 |||||||||||||||||||| Sbjct: 19587 tcttcttcttccatttattt 19568
>gb|AY534675.1| Anolis ernestwilliamsi cytochrome b (cytb) gene, partial cds; mitochondrial Length = 642 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 cgcattacatcttcttcttccatttatt 31 |||||| ||| ||||||||||||||||| Sbjct: 441 cgcattccattttcttcttccatttatt 468
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cgccggagtccatcaccgcg 494 |||||||||||||||||||| Sbjct: 130082 cgccggagtccatcaccgcg 130063
>ref|XM_607483.2| PREDICTED: Bos taurus similar to Rho guanine nucleotide exchange factor (GEF) 10-like isoform 1 (LOC529043), mRNA Length = 3729 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gcacgggggccgccagtggg 398 |||||||||||||||||||| Sbjct: 2464 gcacgggggccgccagtggg 2445
>gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome 7, complete sequence Length = 218291 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttccatttattt 32 |||||||||||||||||||| Sbjct: 4684 tcttcttcttccatttattt 4703
>gb|DQ026190.1| Cephaloleia cf. erichsonii 028 voucher 028 cytochrome b (cytb) gene, partial cds; mitochondrial Length = 449 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 ttacatcttcttcttccatttatt 31 |||||| ||||||||||||||||| Sbjct: 136 ttacattttcttcttccatttatt 159
>gb|AC162901.4| Mus musculus BAC clone RP23-417K5 from chromosome 8, complete sequence Length = 205244 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tagaacttcgtaagtctgct 195 |||||||||||||||||||| Sbjct: 123536 tagaacttcgtaagtctgct 123517
>gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosome 12, complete sequence Length = 199956 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 tcttcttcttccatttatttataa 36 ||||||||||| |||||||||||| Sbjct: 21654 tcttcttcttcaatttatttataa 21677
>gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosome 7, complete sequence Length = 163841 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcttcttcttccatttattt 32 |||||||||||||||||||| Sbjct: 84087 tcttcttcttccatttattt 84106
>emb|X70354.1|PGLIP P.glumae genes lipA and lipB Length = 2900 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 catcaccgcgccggtggcga 504 |||||||||||||||||||| Sbjct: 1361 catcaccgcgccggtggcga 1342
>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence Length = 188819 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 tcttcttcttccatttatttataa 36 ||||||||||| |||||||||||| Sbjct: 131554 tcttcttcttcaatttatttataa 131577
>gb|BC114112.1| Bos taurus similar to Rho guanine nucleotide exchange factor (GEF) 10-like isoform 1, mRNA (cDNA clone MGC:137435 IMAGE:8178880), complete cds Length = 4221 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 gcacgggggccgccagtggg 398 |||||||||||||||||||| Sbjct: 2587 gcacgggggccgccagtggg 2568
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cgccggagtccatcaccgcg 494 |||||||||||||||||||| Sbjct: 849225 cgccggagtccatcaccgcg 849206
>ref|XM_777602.1| PREDICTED: Strongylocentrotus purpuratus similar to dynein, axonemal, heavy polypeptide 5 (LOC577371), mRNA Length = 13014 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 agatccaaggtggcaccacc 304 |||||||||||||||||||| Sbjct: 10430 agatccaaggtggcaccacc 10411
>emb|CR381585.11| Zebrafish DNA sequence from clone DKEY-27P7 in linkage group 20 Contains the gene for a novel protein similar to mouse and human integrin beta 1 binding protein 1 (ITGB1BP1), the gene for a novel protein similar to vertebrate development and differentiation enhancing factor 2 (DDEF2) and three CpG islands, complete sequence Length = 209698 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 tcttcttcttccatttattt 32 |||||||||||||||||||| Sbjct: 25094 tcttcttcttccatttattt 25075
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 ccgccgccgacgtcgtatag 178 |||||||||||||||||||| Sbjct: 600281 ccgccgccgacgtcgtatag 600300
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12, complete sequence Length = 129420 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 475 cgccggagtccatcaccgcg 494 |||||||||||||||||||| Sbjct: 86957 cgccggagtccatcaccgcg 86976
>gb|AC117383.4| Homo sapiens 3 BAC RP11-789L4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194991 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 catcttcttcttccatttatttat 34 ||||||||||||| |||||||||| Sbjct: 188114 catcttcttcttctatttatttat 188137
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 484 ccatcaccgcgccggtggcg 503 |||||||||||||||||||| Sbjct: 2936727 ccatcaccgcgccggtggcg 2936708
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cgccggagtccatcaccgcg 494 |||||||||||||||||||| Sbjct: 849225 cgccggagtccatcaccgcg 849206
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ccaccttgccgccgccgacg 170 |||||||||||||||||||| Sbjct: 7299712 ccaccttgccgccgccgacg 7299693
>gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome 17, complete sequence Length = 224908 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 catcttcttcttccatttatttat 34 ||||||||||||| |||||||||| Sbjct: 89538 catcttcttcttctatttatttat 89561
>dbj|AP005968.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1156C07 Length = 182153 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 ccaccttgccgccgccgacgtcgt 174 ||||||||||||||||| |||||| Sbjct: 76095 ccaccttgccgccgccgccgtcgt 76118
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 ggtgaagtcgtagcatgtgtcgag 373 ||||||||||||||| |||||||| Sbjct: 114673 ggtgaagtcgtagcacgtgtcgag 114650
>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ccaccttgccgccgccgacg 170 |||||||||||||||||||| Sbjct: 75520 ccaccttgccgccgccgacg 75501
>ref|XM_317709.2| Anopheles gambiae str. PEST ENSANGP00000010303 (ENSANGG00000007814), partial mRNA Length = 1425 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 ctgctgctgcacattgccga 210 |||||||||||||||||||| Sbjct: 757 ctgctgctgcacattgccga 776
>dbj|AK103772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143K18, full insert sequence Length = 1208 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cgccggagtccatcaccgcg 494 |||||||||||||||||||| Sbjct: 728 cgccggagtccatcaccgcg 709
>dbj|AK059942.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-F11, full insert sequence Length = 1093 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cgccggagtccatcaccgcg 494 |||||||||||||||||||| Sbjct: 680 cgccggagtccatcaccgcg 661
>emb|AL356032.4|CNS05TDD Human chromosome 14 DNA sequence BAC R-802A16 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 169936 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ttcttcttccatttatttat 34 |||||||||||||||||||| Sbjct: 64627 ttcttcttccatttatttat 64646
>dbj|AP000763.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-809N8, complete sequence Length = 189920 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cctttgggaccttcacatca 341 |||||||||||||||||||| Sbjct: 7623 cctttgggaccttcacatca 7604
>dbj|AP000562.5| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-40O16, complete sequence Length = 94000 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 cctttgggaccttcacatca 341 |||||||||||||||||||| Sbjct: 93634 cctttgggaccttcacatca 93615
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 gtccatcaccgcgccggtgg 501 |||||||||||||||||||| Sbjct: 468550 gtccatcaccgcgccggtgg 468569
>emb|CT009715.15| Mouse DNA sequence from clone RP23-85E24 on chromosome 17, complete sequence Length = 178948 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 catcttcttcttccatttatttat 34 ||||||||||||| |||||||||| Sbjct: 164247 catcttcttcttctatttatttat 164270
>gb|AC124491.5| Mus musculus BAC clone RP23-454B2 from chromosome 8, complete sequence Length = 187779 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tagaacttcgtaagtctgct 195 |||||||||||||||||||| Sbjct: 10972 tagaacttcgtaagtctgct 10991
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 475 cgccggagtccatcaccgcg 494 |||||||||||||||||||| Sbjct: 849222 cgccggagtccatcaccgcg 849203
>gb|U78485.1|DAU78485 Drosophila acanthoptera cytochrome P450 mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1995 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 gtctgctgctgcacattgcc 208 |||||||||||||||||||| Sbjct: 273 gtctgctgctgcacattgcc 254
>emb|AL672049.13| Mouse DNA sequence from clone RP23-188K3 on chromosome 11, complete sequence Length = 224034 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 11 catcttcttcttccatttatttat 34 ||||||||| |||||||||||||| Sbjct: 221099 catcttctttttccatttatttat 221122 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,634,456 Number of Sequences: 3902068 Number of extensions: 4634456 Number of successful extensions: 79567 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 78640 Number of HSP's gapped (non-prelim): 929 length of query: 504 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 482 effective length of database: 17,147,199,772 effective search space: 8264950290104 effective search space used: 8264950290104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
