>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb|
           chitinase-1) (TBC-1)
          Length = 314

 Score =  109 bits (272), Expect = 4e-24
 Identities = 52/112 (46%), Positives = 73/112 (65%), Gaps = 2/112 (1%)
 Frame = -3

Query: 474 YYQTLWAAHGTAIDYVNFQFYAYGASTTAAQYVSLFDEQIANYPGANILASFTTAATNTS 295
           +YQ LW  +G  IDYVNFQFYAY A T+  Q++  F+EQ +NY G  +L SF+T ++   
Sbjct: 193 HYQALWEKYGHQIDYVNFQFYAYSARTSVEQFLKYFEEQSSNYHGGKVLVSFSTDSSGGL 252

Query: 294 VPVDTALSACRTLQEQGKLYGIFVWAADHS--RNQGFKYETQSQALLTDATA 145
            P +    AC  L++QGKL+GIFVW+AD S   N  F+YE Q+Q++L    +
Sbjct: 253 KPDNGFFRACSILKKQGKLHGIFVWSADDSLMSNNVFRYEMQAQSMLASVNS 304

>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)|
          Length = 275

 Score =  105 bits (262), Expect = 6e-23
 Identities = 51/107 (47%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = -3

Query: 474 YYQTLWAAHGTAIDYVNFQFYAYGASTTAAQYVSLFDEQIANYPGANILASFTTAATNTS 295
           +YQ LW  +G  IDYVNFQFY Y +  +  Q++  F+ Q +NYPG  +L SF+T  +   
Sbjct: 167 HYQALWEKYGHQIDYVNFQFYVYSSRMSVEQFLKYFEMQRSNYPGGKVLVSFSTDNSGGL 226

Query: 294 VPVDTALSACRTLQEQGKLYGIFVWAADHS--RNQGFKYETQSQALL 160
            P +    AC  L++QGKL+GIFVW+AD S   N  FKYE Q+Q+LL
Sbjct: 227 KPRNGFFDACSILKKQGKLHGIFVWSADDSLMSNDVFKYEMQAQSLL 273

>CHI1_RHIOL (P29026) Chitinase 1 precursor (EC 3.2.1.14)|
          Length = 540

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
 Frame = -3

Query: 450 HGTAIDYVNFQFYAYGASTTAAQY-VSLFDEQI-ANYPGANILASFT-----TAATNTSV 292
           +  + DYVN QFY    S T + +    +D       P  N+   FT     TAA +  V
Sbjct: 208 NSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVKIMFTIPGSPTAAGSGYV 267

Query: 291 PVDTALSACRTLQEQGKLY-GIFVWAADHSRNQG 193
           P+ T  +   +L  +   Y G+ VW A  + N G
Sbjct: 268 PMSTLQTIVPSLASEYSSYGGVSVWDASQAWNNG 301

>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)|
          Length = 542

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
 Frame = -3

Query: 450 HGTAIDYVNFQFYAYGASTTAAQY-VSLFDEQI-ANYPGANILASFT-----TAATNTSV 292
           +  + DYVN QFY    S T + +    +D       P  N+   FT     TAA +  V
Sbjct: 208 NSASFDYVNVQFYNNYCSATGSSFNFDTWDNWAKTTSPNKNVKIMFTVPGSSTAAGSGYV 267

Query: 291 PVDTALSACRTLQEQGKLY-GIFVWAADHSRNQG 193
           P+ T  +   +L  +   Y G+ VW A  + N G
Sbjct: 268 PMSTLQTIVPSLASKYSSYGGVSVWDASQAWNNG 301

>AP180_RAT (Q05140) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 915

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 19/46 (41%), Positives = 20/46 (43%)
 Frame = -3

Query: 402 ASTTAAQYVSLFDEQIANYPGANILASFTTAATNTSVPVDTALSAC 265
           A T A   V LF +  A  PG    AS    A  T  PV  AL AC
Sbjct: 425 AVTAATTEVDLFGDAFAASPGEAPAASEGATAPATPAPVAAALDAC 470

>VL2_HPV2A (P25487) Minor capsid protein L2|
          Length = 524

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +1

Query: 220 PDKDAVELALLLQSPASTKRGVDRHRGIGRR---RGEAGQDVGSRV 348
           PD D +++  L +   +++RG  R   +GRR   R  +G+ +G+RV
Sbjct: 330 PDPDFLDIVALHRPALTSRRGTVRFSRLGRRATLRTRSGKQIGARV 375

>AP180_HUMAN (O60641) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein)
          Length = 907

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 18/44 (40%), Positives = 19/44 (43%)
 Frame = -3

Query: 396 TTAAQYVSLFDEQIANYPGANILASFTTAATNTSVPVDTALSAC 265
           T     V LF +  A  PG    AS   AA  T  PV  AL AC
Sbjct: 431 TAVTAEVDLFGDAFAASPGEAPAASEGAAAPATPTPVAAALDAC 474

>RP1L1_MOUSE (Q8CGM2) Retinitis pigmentosa 1-like 1 protein (Retinitis pigmentosa|
            1-like protein 1)
          Length = 1859

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
 Frame = +1

Query: 142  VSGGISQQGLRLCLVLESLVPGMVCSPDKDAVELA------LLLQSPASTKRGVDRHRGI 303
            VSG   ++   L  +L+S   G   S +++A+E+A      +L Q    T +G D  +G+
Sbjct: 1552 VSGAPVRKAFDLQQILQSKKGG---SSNREAMEVAPQRTGRMLSQEDLGTVQGADEKQGL 1608

Query: 304  GRRRGEAGQ 330
            G   GE G+
Sbjct: 1609 GVAEGEEGE 1617

>GYRB_BUCAI (P57126) DNA gyrase subunit B (EC 5.99.1.3)|
          Length = 803

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +2

Query: 11  YALLLRKNRAR*TIRPTIKI--YAHFIPYDFTHKSIYS 118
           Y++ +++N  +    PTIKI  YAH+  YDF  + + S
Sbjct: 646 YSIEIKENLDKNIFEPTIKISRYAHYTKYDFKEEFLKS 683

>GUAA_LEIXX (Q6AD51) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 503

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 16/71 (22%)
 Frame = +1

Query: 286 DRHRGIGRRRGEA----------GQDVGSRVVGDL------LVEEADVLRRGGASAVGVE 417
           D  R IGR  G            G  +G R+VGD+      L+ +AD + R   +A G++
Sbjct: 359 DEVRAIGRELGLPEVIVGRQPFPGPGLGIRIVGDVTRERLDLLRDADAIVRAELTAAGLD 418

Query: 418 LEVDIVYGCPV 450
            E   ++ CPV
Sbjct: 419 SE---IWQCPV 426

>CKAP5_HUMAN (Q14008) Cytoskeleton-associated protein 5 (Colonic and hepatic|
           tumor over-expressed protein) (Ch-TOG protein)
          Length = 2032

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = +1

Query: 256 QSPASTKRGVDRHRGIGRRRGEAGQ--DVGSRVVGDLL 363
           QSP +  RG+ +H   G   GE G   D GS  V DLL
Sbjct: 815 QSPPAPTRGISKHSTSGTDEGEDGDEPDDGSNDVVDLL 852

>AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clathrin|
           coat-associated protein AP180) (91 kDa
           synaptosomal-associated protein) (Phosphoprotein F1-20)
          Length = 901

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 18/46 (39%), Positives = 19/46 (41%)
 Frame = -3

Query: 402 ASTTAAQYVSLFDEQIANYPGANILASFTTAATNTSVPVDTALSAC 265
           A T     V LF +  A  PG    AS    A  T  PV  AL AC
Sbjct: 425 AVTAVTTEVDLFGDAFAASPGEAPAASEGATAPATPAPVAAALDAC 470

>VL2_HPV27 (P36755) Minor capsid protein L2|
          Length = 464

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
 Frame = +1

Query: 220 PDKDAVELALLLQSPASTKRGVDRHRGIGRR---RGEAGQDVGSRV 348
           PD D +++  L +   ++++G  R   +GRR   R  +G+ +G+RV
Sbjct: 273 PDPDFLDIVALHRPALTSRQGTVRFSRLGRRATLRTRSGKQIGARV 318


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,895,404
Number of Sequences: 219361
Number of extensions: 1185753
Number of successful extensions: 3230
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3230
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)