Clone Name | rbart19a02 |
---|---|
Clone Library Name | barley_pub |
>PIRL1_ARATH (Q9LPS9) Putative pirin-like protein At1g50590| Length = 310 Score = 49.3 bits (116), Expect = 5e-06 Identities = 22/42 (52%), Positives = 27/42 (64%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRNGFELAAGWSS 221 P GE + GPFVMNT EE+ + +D+ N RNGFE A W S Sbjct: 260 PIGEPMVQFGPFVMNTQEEIDETIDDFENFRNGFEKARHWKS 301
>PIR_HUMAN (O00625) Pirin| Length = 290 Score = 48.9 bits (115), Expect = 6e-06 Identities = 23/42 (54%), Positives = 27/42 (64%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRNGFELAAGWSS 221 P E V GPFVMNT+EE+ QA D+ N +NGFE A W S Sbjct: 245 PLREPVIQHGPFVMNTNEEISQAILDFRNAKNGFERAKTWKS 286
>PIR_MOUSE (Q9D711) Pirin| Length = 290 Score = 48.5 bits (114), Expect = 8e-06 Identities = 23/42 (54%), Positives = 27/42 (64%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRNGFELAAGWSS 221 P E V GPFVMNT+EE+ QA D+ N +NGFE A W S Sbjct: 245 PLREPVVQHGPFVMNTNEEISQAILDFRNAKNGFEGARTWKS 286
>PIRL4_ARATH (Q9LX45) Putative pirin-like protein At3g59260| Length = 271 Score = 48.1 bits (113), Expect = 1e-05 Identities = 21/42 (50%), Positives = 26/42 (61%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRNGFELAAGWSS 221 P GE V GPFVMN+ +E++ DY N NGFE+A W S Sbjct: 229 PIGEPVVQHGPFVMNSQDEIEMTIGDYRNGMNGFEMAKHWRS 270
>PIRL2_ARATH (Q9ZW82) Putative pirin-like protein At2g43120| Length = 296 Score = 47.0 bits (110), Expect = 2e-05 Identities = 22/42 (52%), Positives = 25/42 (59%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRNGFELAAGWSS 221 P GE V GPFVMNT E+ EDY +NGFE+A W S Sbjct: 254 PIGEPVVQYGPFVMNTQAEIDMTIEDYHYGKNGFEMAKYWRS 295
>PRN1_ARATH (Q9LX49) Pirin 1 (AtPirin1)| Length = 287 Score = 45.8 bits (107), Expect = 5e-05 Identities = 20/37 (54%), Positives = 25/37 (67%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRNGFELA 236 P GE V GPFVMN+ E+ A +DY N +NGFE+A Sbjct: 249 PIGEPVVQCGPFVMNSQAEIDMAFDDYQNAKNGFEMA 285
>PIRL_LYCES (Q9SEE4) Pirin-like protein| Length = 291 Score = 45.1 bits (105), Expect = 8e-05 Identities = 21/42 (50%), Positives = 25/42 (59%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRNGFELAAGWSS 221 P E V GPFVMNT E+ QA +DY +NGFE + W S Sbjct: 249 PINEPVVQYGPFVMNTKSEIMQAYQDYQLGKNGFERSRQWYS 290
>Y3240_PSEAE (Q9HZ00) Hypothetical protein PA3240| Length = 285 Score = 33.5 bits (75), Expect = 0.26 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDY 266 P E + GPFVMN+ EE++QA DY Sbjct: 252 PLHEPIVQYGPFVMNSREEIEQALRDY 278
>PKCB1_HUMAN (Q9ULU4) Protein kinase C-binding protein 1 (Rack7) (Cutaneous T-cell| lymphoma associated antigen se14-3) (CTCL tumor antigen se14-3) (Zinc finger MYND domain containing protein 8) Length = 1186 Score = 33.5 bits (75), Expect = 0.26 Identities = 15/58 (25%), Positives = 25/58 (43%) Frame = +3 Query: 165 FCCWPTNVCECTAMVGHWPEDQPAANSKPLRRFR*SSLACCTSSLVFITKGPSIATAS 338 +CCW T+ C+ HWPE + + + T +L ++G S +T S Sbjct: 1038 YCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEVNTETLNKSSQGSSSSTQS 1095
>Y2418_PSEAE (Q9I163) Hypothetical protein PA2418| Length = 286 Score = 32.0 bits (71), Expect = 0.74 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRR 254 P E + GPFVM++ EE+ QA ED+ N R Sbjct: 251 PLDEPIIGYGPFVMSSREEIDQAIEDFENGR 281
>Y1242_SYNY3 (P42349) Hypothetical methyltransferase sll1242 (EC 2.1.1.-) (ORF| N) Length = 536 Score = 31.6 bits (70), Expect = 0.97 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -3 Query: 343 HGEAVAMDGPFVMNTSEEVQQAREDYL 263 HG+ VA+ GPF + +EVQ A D+L Sbjct: 91 HGKLVAVGGPFATSVPDEVQNAGADFL 117
>MAGE1_HUMAN (Q9HCI5) Melanoma-associated antigen E1 (MAGE-E1 antigen)| (Hepatocellular carcinoma-associated protein 1) Length = 957 Score = 31.6 bits (70), Expect = 0.97 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 6/59 (10%) Frame = +1 Query: 118 ITTGPGKKIHAMPSTA-SVVGPPMFVNARLWSVT-----GQRTSRRPTRSRCGGSGSPP 276 I+ GPG + PS S GPP SVT G+ TSR PT S + PP Sbjct: 96 ISEGPGTSVLPTPSEGLSTSGPPTISKGLCTSVTLAASEGRNTSRPPTSSEEPSTSVPP 154
>Y481_CAUCR (P58112) Hypothetical protein CC0481| Length = 276 Score = 31.2 bits (69), Expect = 1.3 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRR 254 P GE V GPFVM+T E + QA +D+ R Sbjct: 245 PIGEPVFWHGPFVMDTREGLMQAFDDFQRGR 275
>SPTA1_HUMAN (P02549) Spectrin alpha chain, erythrocyte (Erythroid| alpha-spectrin) Length = 2418 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRNGFE 242 P V GP V+ T+EE+Q+ R++ L R F+ Sbjct: 5 PKETVVESSGPKVLETAEEIQERRQEVLTRYQSFK 39
>Y3769_VIBCH (Q9KKY1) Hypothetical protein VCA0969| Length = 282 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDY 266 P E V GPFVMN+ E++QA DY Sbjct: 248 PIDEPVVHYGPFVMNSMAEIEQAIRDY 274
>SPTA1_MOUSE (P08032) Spectrin alpha chain, erythrocyte (Erythroid| alpha-spectrin) Length = 2415 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -3 Query: 346 PHGEAVAMDGPFVMNTSEEVQQAREDYLNRRNGFE 242 P AV GP V+ T+EE+Q R + LN+ F+ Sbjct: 4 PKETAVESSGPKVLETAEEIQHRRAEVLNQYQRFK 38
>B028_CAEEL (P41996) Cytokinesis protein B0280.5 precursor| Length = 524 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/60 (30%), Positives = 22/60 (36%) Frame = +3 Query: 168 CCWPTNVCECTAMVGHWPEDQPAANSKPLRRFR*SSLACCTSSLVFITKGPSIATASPCG 347 C WP +V EC + P QP S C+SS T G +I P G Sbjct: 290 CDWPRDVAECAGL----PTPQPTCEEDGY-----FSFGQCSSSFTACTNGRAIVMFCPAG 340
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 28.9 bits (63), Expect = 6.3 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = +1 Query: 121 TTGPGKKIHAMPSTASVVGPPMFVNARLWS----VTGQRTSRRPTRSRCGGSGSPPWPV 285 T+GPG + +P+T++ P + + V T+ PT S G G+ P PV Sbjct: 117 TSGPGTSLSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSPV 175 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,097,693 Number of Sequences: 219361 Number of extensions: 988885 Number of successful extensions: 2977 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2889 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2977 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)