ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart18h10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1I17RA_MOUSE (Q60943) Interleukin-17 receptor A precursor (IL-17 ... 31 1.2
2K1849_MOUSE (Q69Z89) Protein KIAA1849 31 1.6
3GRSB_BREBE (P0C064) Gramicidin S synthetase 2 (Gramicidin S synt... 31 1.6
4GRSB_ANEMI (P0C063) Gramicidin S synthetase 2 (Gramicidin S synt... 31 1.6
5LNT_COXBU (Q820B4) Apolipoprotein N-acyltransferase (EC 2.3.1.-)... 30 2.0
6OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid) 29 4.5
7TIE2_BRARE (O73791) Tyrosine-protein kinase receptor Tie-2 precu... 29 4.5
8SAPKA_ORYSA (Q75H77) Serine/threonine-protein kinase SAPK10 (EC ... 29 4.5
9CAC1M_MUSDO (Q25452) Muscle calcium channel alpha-1 subunit (MDL... 29 4.5
10BKRB1_RABIT (P48748) B1 bradykinin receptor (BK-1 receptor) (B1R) 29 5.9
11SKIL_PONPY (Q5R431) Ski-like protein (Ski-related protein) 28 7.7
12SAPK9_ORYSA (Q75V57) Serine/threonine-protein kinase SAPK9 (EC 2... 28 7.7
13M4K3_HUMAN (Q8IVH8) Mitogen-activated protein kinase kinase kina... 28 7.7

>I17RA_MOUSE (Q60943) Interleukin-17 receptor A precursor (IL-17 receptor)|
          Length = 864

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 277 PSLVWLLGLLIVMRSGDSASRYASAPVWWCAWEGVYC 167
           P+L WLL LL V+  G ++ R    P   CA EG+ C
Sbjct: 14  PALGWLLLLLNVLAPGRASPRLLDFPAPVCAQEGLSC 50



to top

>K1849_MOUSE (Q69Z89) Protein KIAA1849|
          Length = 1099

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/66 (30%), Positives = 26/66 (39%)
 Frame = +2

Query: 146  PLLNYIPAVHSLPRTPPHRCGSVSARRVTGPHYNQQTE*PDQAGLGDSVFFSSICTGQLI 325
            PL N  P   ++   PPH      A R  GP   Q T    +     S+   S C   ++
Sbjct: 872  PLANRDPGRVAVETAPPHSLPVTGAPRAQGPPGRQPTRGDRRGSQAGSLHTDSSC---ML 928

Query: 326  PPPFTP 343
             PP TP
Sbjct: 929  TPPSTP 934



to top

>GRSB_BREBE (P0C064) Gramicidin S synthetase 2 (Gramicidin S synthetase II)|
           [Includes: ATP-dependent proline adenylase (ProA)
           (Proline activase); ATP-dependent valine adenylase
           (ValA) (Valine activase); ATP-dependent ornithine
           adenylase (OrnA) (Ornithine
          Length = 4449

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 25/79 (31%), Positives = 30/79 (37%)
 Frame = +3

Query: 33  ERTQKIPQTTKHPLNAG*LPFSKETKRRRKRYLKPENTPS*IIYQQYTPSHAHHHTGAEA 212
           E   + P   KH + AG            KRYL   N     ++  Y PS  H  T    
Sbjct: 715 EFINRFPTCVKHIITAG---EQLVVNNEFKRYLHEHNVH---LHNHYGPSETHVVTTYTI 768

Query: 213 YRLAESPDLITISKPSSQT 269
              AE P+L  I KP S T
Sbjct: 769 NPEAEIPELPPIGKPISNT 787



to top

>GRSB_ANEMI (P0C063) Gramicidin S synthetase 2 (Gramicidin S synthetase II)|
           [Includes: ATP-dependent proline adenylase (ProA)
           (Proline activase); ATP-dependent valine adenylase
           (ValA) (Valine activase); ATP-dependent ornithine
           adenylase (OrnA) (Ornithine
          Length = 4450

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 25/79 (31%), Positives = 30/79 (37%)
 Frame = +3

Query: 33  ERTQKIPQTTKHPLNAG*LPFSKETKRRRKRYLKPENTPS*IIYQQYTPSHAHHHTGAEA 212
           E   + P   KH + AG            KRYL   N     ++  Y PS  H  T    
Sbjct: 715 EFINRFPTCVKHIITAG---EQLVVNNEFKRYLHEHNVH---LHNHYGPSETHVVTTYTI 768

Query: 213 YRLAESPDLITISKPSSQT 269
              AE P+L  I KP S T
Sbjct: 769 NPEAEIPELPPIGKPISNT 787



to top

>LNT_COXBU (Q820B4) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP|
           N-acyltransferase)
          Length = 485

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = -3

Query: 202 PVWWCAWEGVYCWYIIQEGVFSGFRYLFLLLFVSFENGSYPAFRGCFVV*GIFWVLSVTS 23
           P WW  WE    W  ++  +F+GF +LF  L  S  N     F   F + GI  +++  S
Sbjct: 119 PAWWVVWE----W--LRSILFTGFPWLF--LGYSQINSPLKGFGPLFGIYGISLIVAFIS 170

Query: 22  VCM 14
            C+
Sbjct: 171 GCI 173



to top

>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 14/91 (15%)
 Frame = +2

Query: 143 HPLL----NYIPAVHSLPRTPPH-------RCGSVSARRVTGPHYNQQTE*PDQAGLGDS 289
           HPL     +++P +   P  PPH          S        P  +Q +  P Q  +G +
Sbjct: 423 HPLPPASPHHVPPLQQQPPPPPHVSAGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQN 482

Query: 290 VFFSS---ICTGQLIPPPFTPKPQVVISPSP 373
              SS     +G    PP TP PQ V+ P+P
Sbjct: 483 SNDSSSGGAHSGMGSGPPGTPNPQQVMRPTP 513



to top

>TIE2_BRARE (O73791) Tyrosine-protein kinase receptor Tie-2 precursor (EC|
           2.7.10.1)
          Length = 1116

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 131 ETRKHPLLNYIPAVHSLPRTPPHRCGSVSARRVTGP 238
           + R H +L   PAVH     PPHR  +V +R +  P
Sbjct: 774 QRRIHSILREEPAVHFSSAPPPHRRSAVVSRSLVFP 809



to top

>SAPKA_ORYSA (Q75H77) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           10)
          Length = 362

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = +2

Query: 71  PECR--ITAIFERNEXXXXXIPETRKHP-LLNYIPA 169
           PECR  I  IF  N      IPE R HP  L  +PA
Sbjct: 250 PECRDLIARIFVANPATRISIPEIRNHPWFLKNLPA 285



to top

>CAC1M_MUSDO (Q25452) Muscle calcium channel alpha-1 subunit (MDL-alpha-1)|
          Length = 1687

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
 Frame = -3

Query: 289 AVS*PSLVWLLGLLIVMRSGDSASRYASAPVWWCAWE--------GVYCWYIIQEGVFSG 134
           AV   +  WL+ LL+ + +G  A+ +   P+W   ++         ++   +I +    G
Sbjct: 430 AVKSQAFYWLIILLVFLNTGVLATEHYRQPIWLDQFQEYTNIFFIALFTCEMILKMYSLG 489

Query: 133 FRYLFLLLFVSFENGSYPAFRGCFVV*GIFWVLSVTSVCMM 11
           F+  F+ LF  F+         CFVV G    + +TS  +M
Sbjct: 490 FQGYFVSLFNRFD---------CFVVIGSISEMVLTSSELM 521



to top

>BKRB1_RABIT (P48748) B1 bradykinin receptor (BK-1 receptor) (B1R)|
          Length = 352

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 20/58 (34%), Positives = 25/58 (43%)
 Frame = -1

Query: 225 RRADTLPHRCGGVRGRECTAGI*FRRGCFLVSGIXXXXXXFLSKMAVILHSGGVLWFE 52
           RR + +P RCGG R  + TA I      FLV         FL  +  +   GG  W E
Sbjct: 230 RRGERVPSRCGGPRDSKSTALILTLVASFLVCWAPYHFFAFLECLWQVHAIGGCFWEE 287



to top

>SKIL_PONPY (Q5R431) Ski-like protein (Ski-related protein)|
          Length = 684

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 5/117 (4%)
 Frame = +2

Query: 65  TPPECRITAIFERNEXXXXXIPETRKHPLLNYIPA-VHSLPRTPPHRCGSVSARRVTGP- 238
           +PP  ++      N      +P  +K  L +Y  A V +        C SV       P 
Sbjct: 26  SPPAKKMVTDIHANGKTINKVPTVKKEHLDDYGEAPVETDGEHIKRTCTSVPETLHLNPS 85

Query: 239 --HYNQQTE*PDQAGLGDSVFFSSICTGQLIPPP-FTPKPQVVISPSPLLATDDHFT 400
             H   Q     Q+ LG    FS+  + + + P  F P P   + P PLL   D  T
Sbjct: 86  LKHTLAQFHLSSQSSLGGPAAFSARHSQESMSPTVFLPLPSPQVLPGPLLIPSDSST 142



to top

>SAPK9_ORYSA (Q75V57) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           9)
          Length = 361

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +2

Query: 71  PECR--ITAIFERNEXXXXXIPETRKHP-LLNYIPA 169
           PECR  IT IF  N      +PE + HP  +  IPA
Sbjct: 249 PECRDLITRIFVGNPASRITMPEIKNHPWFMKNIPA 284



to top

>M4K3_HUMAN (Q8IVH8) Mitogen-activated protein kinase kinase kinase kinase 3|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 3) (MEK
           kinase kinase 3) (MEKKK 3) (Germinal center
           kinase-related protein kinase) (GLK)
          Length = 894

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 323 IPPPFTPKPQVVISPSPLLATDD 391
           IPPP  PKP+ +  P  + +T+D
Sbjct: 431 IPPPLPPKPKSIFIPQEMHSTED 453


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,509,294
Number of Sequences: 219361
Number of extensions: 1305478
Number of successful extensions: 3485
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3477
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top