Clone Name | rbart18h10 |
---|---|
Clone Library Name | barley_pub |
>I17RA_MOUSE (Q60943) Interleukin-17 receptor A precursor (IL-17 receptor)| Length = 864 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -3 Query: 277 PSLVWLLGLLIVMRSGDSASRYASAPVWWCAWEGVYC 167 P+L WLL LL V+ G ++ R P CA EG+ C Sbjct: 14 PALGWLLLLLNVLAPGRASPRLLDFPAPVCAQEGLSC 50
>K1849_MOUSE (Q69Z89) Protein KIAA1849| Length = 1099 Score = 30.8 bits (68), Expect = 1.6 Identities = 20/66 (30%), Positives = 26/66 (39%) Frame = +2 Query: 146 PLLNYIPAVHSLPRTPPHRCGSVSARRVTGPHYNQQTE*PDQAGLGDSVFFSSICTGQLI 325 PL N P ++ PPH A R GP Q T + S+ S C ++ Sbjct: 872 PLANRDPGRVAVETAPPHSLPVTGAPRAQGPPGRQPTRGDRRGSQAGSLHTDSSC---ML 928 Query: 326 PPPFTP 343 PP TP Sbjct: 929 TPPSTP 934
>GRSB_BREBE (P0C064) Gramicidin S synthetase 2 (Gramicidin S synthetase II)| [Includes: ATP-dependent proline adenylase (ProA) (Proline activase); ATP-dependent valine adenylase (ValA) (Valine activase); ATP-dependent ornithine adenylase (OrnA) (Ornithine Length = 4449 Score = 30.8 bits (68), Expect = 1.6 Identities = 25/79 (31%), Positives = 30/79 (37%) Frame = +3 Query: 33 ERTQKIPQTTKHPLNAG*LPFSKETKRRRKRYLKPENTPS*IIYQQYTPSHAHHHTGAEA 212 E + P KH + AG KRYL N ++ Y PS H T Sbjct: 715 EFINRFPTCVKHIITAG---EQLVVNNEFKRYLHEHNVH---LHNHYGPSETHVVTTYTI 768 Query: 213 YRLAESPDLITISKPSSQT 269 AE P+L I KP S T Sbjct: 769 NPEAEIPELPPIGKPISNT 787
>GRSB_ANEMI (P0C063) Gramicidin S synthetase 2 (Gramicidin S synthetase II)| [Includes: ATP-dependent proline adenylase (ProA) (Proline activase); ATP-dependent valine adenylase (ValA) (Valine activase); ATP-dependent ornithine adenylase (OrnA) (Ornithine Length = 4450 Score = 30.8 bits (68), Expect = 1.6 Identities = 25/79 (31%), Positives = 30/79 (37%) Frame = +3 Query: 33 ERTQKIPQTTKHPLNAG*LPFSKETKRRRKRYLKPENTPS*IIYQQYTPSHAHHHTGAEA 212 E + P KH + AG KRYL N ++ Y PS H T Sbjct: 715 EFINRFPTCVKHIITAG---EQLVVNNEFKRYLHEHNVH---LHNHYGPSETHVVTTYTI 768 Query: 213 YRLAESPDLITISKPSSQT 269 AE P+L I KP S T Sbjct: 769 NPEAEIPELPPIGKPISNT 787
>LNT_COXBU (Q820B4) Apolipoprotein N-acyltransferase (EC 2.3.1.-) (ALP| N-acyltransferase) Length = 485 Score = 30.4 bits (67), Expect = 2.0 Identities = 20/63 (31%), Positives = 30/63 (47%) Frame = -3 Query: 202 PVWWCAWEGVYCWYIIQEGVFSGFRYLFLLLFVSFENGSYPAFRGCFVV*GIFWVLSVTS 23 P WW WE W ++ +F+GF +LF L S N F F + GI +++ S Sbjct: 119 PAWWVVWE----W--LRSILFTGFPWLF--LGYSQINSPLKGFGPLFGIYGISLIVAFIS 170 Query: 22 VCM 14 C+ Sbjct: 171 GCI 173
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 29.3 bits (64), Expect = 4.5 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 14/91 (15%) Frame = +2 Query: 143 HPLL----NYIPAVHSLPRTPPH-------RCGSVSARRVTGPHYNQQTE*PDQAGLGDS 289 HPL +++P + P PPH S P +Q + P Q +G + Sbjct: 423 HPLPPASPHHVPPLQQQPPPPPHVSAGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQN 482 Query: 290 VFFSS---ICTGQLIPPPFTPKPQVVISPSP 373 SS +G PP TP PQ V+ P+P Sbjct: 483 SNDSSSGGAHSGMGSGPPGTPNPQQVMRPTP 513
>TIE2_BRARE (O73791) Tyrosine-protein kinase receptor Tie-2 precursor (EC| 2.7.10.1) Length = 1116 Score = 29.3 bits (64), Expect = 4.5 Identities = 14/36 (38%), Positives = 19/36 (52%) Frame = +2 Query: 131 ETRKHPLLNYIPAVHSLPRTPPHRCGSVSARRVTGP 238 + R H +L PAVH PPHR +V +R + P Sbjct: 774 QRRIHSILREEPAVHFSSAPPPHRRSAVVSRSLVFP 809
>SAPKA_ORYSA (Q75H77) Serine/threonine-protein kinase SAPK10 (EC 2.7.11.1)| (Osmotic stress/abscisic acid-activated protein kinase 10) Length = 362 Score = 29.3 bits (64), Expect = 4.5 Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 3/36 (8%) Frame = +2 Query: 71 PECR--ITAIFERNEXXXXXIPETRKHP-LLNYIPA 169 PECR I IF N IPE R HP L +PA Sbjct: 250 PECRDLIARIFVANPATRISIPEIRNHPWFLKNLPA 285
>CAC1M_MUSDO (Q25452) Muscle calcium channel alpha-1 subunit (MDL-alpha-1)| Length = 1687 Score = 29.3 bits (64), Expect = 4.5 Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 8/101 (7%) Frame = -3 Query: 289 AVS*PSLVWLLGLLIVMRSGDSASRYASAPVWWCAWE--------GVYCWYIIQEGVFSG 134 AV + WL+ LL+ + +G A+ + P+W ++ ++ +I + G Sbjct: 430 AVKSQAFYWLIILLVFLNTGVLATEHYRQPIWLDQFQEYTNIFFIALFTCEMILKMYSLG 489 Query: 133 FRYLFLLLFVSFENGSYPAFRGCFVV*GIFWVLSVTSVCMM 11 F+ F+ LF F+ CFVV G + +TS +M Sbjct: 490 FQGYFVSLFNRFD---------CFVVIGSISEMVLTSSELM 521
>BKRB1_RABIT (P48748) B1 bradykinin receptor (BK-1 receptor) (B1R)| Length = 352 Score = 28.9 bits (63), Expect = 5.9 Identities = 20/58 (34%), Positives = 25/58 (43%) Frame = -1 Query: 225 RRADTLPHRCGGVRGRECTAGI*FRRGCFLVSGIXXXXXXFLSKMAVILHSGGVLWFE 52 RR + +P RCGG R + TA I FLV FL + + GG W E Sbjct: 230 RRGERVPSRCGGPRDSKSTALILTLVASFLVCWAPYHFFAFLECLWQVHAIGGCFWEE 287
>SKIL_PONPY (Q5R431) Ski-like protein (Ski-related protein)| Length = 684 Score = 28.5 bits (62), Expect = 7.7 Identities = 30/117 (25%), Positives = 43/117 (36%), Gaps = 5/117 (4%) Frame = +2 Query: 65 TPPECRITAIFERNEXXXXXIPETRKHPLLNYIPA-VHSLPRTPPHRCGSVSARRVTGP- 238 +PP ++ N +P +K L +Y A V + C SV P Sbjct: 26 SPPAKKMVTDIHANGKTINKVPTVKKEHLDDYGEAPVETDGEHIKRTCTSVPETLHLNPS 85 Query: 239 --HYNQQTE*PDQAGLGDSVFFSSICTGQLIPPP-FTPKPQVVISPSPLLATDDHFT 400 H Q Q+ LG FS+ + + + P F P P + P PLL D T Sbjct: 86 LKHTLAQFHLSSQSSLGGPAAFSARHSQESMSPTVFLPLPSPQVLPGPLLIPSDSST 142
>SAPK9_ORYSA (Q75V57) Serine/threonine-protein kinase SAPK9 (EC 2.7.11.1)| (Osmotic stress/abscisic acid-activated protein kinase 9) Length = 361 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 3/36 (8%) Frame = +2 Query: 71 PECR--ITAIFERNEXXXXXIPETRKHP-LLNYIPA 169 PECR IT IF N +PE + HP + IPA Sbjct: 249 PECRDLITRIFVGNPASRITMPEIKNHPWFMKNIPA 284
>M4K3_HUMAN (Q8IVH8) Mitogen-activated protein kinase kinase kinase kinase 3| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 3) (MEK kinase kinase 3) (MEKKK 3) (Germinal center kinase-related protein kinase) (GLK) Length = 894 Score = 28.5 bits (62), Expect = 7.7 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +2 Query: 323 IPPPFTPKPQVVISPSPLLATDD 391 IPPP PKP+ + P + +T+D Sbjct: 431 IPPPLPPKPKSIFIPQEMHSTED 453 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,509,294 Number of Sequences: 219361 Number of extensions: 1305478 Number of successful extensions: 3485 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3265 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3477 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)