Clone Name | rbart18h09 |
---|---|
Clone Library Name | barley_pub |
>HIS8_METMA (Q8PX17) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 368 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = +2 Query: 173 PSRRFPVEPILVRKNQRFQTLARGLMFTVAHRLTILLCLSPN 298 P+R EP+ +R+NQ F ++ V+ R I+ SPN Sbjct: 132 PARACGAEPVFIRRNQDFSLNPEKILEAVSPRTKIIFLCSPN 173
>VTS1_YEAST (Q08831) Protein VTS1 (VTI1-2 suppressor protein 1)| Length = 523 Score = 29.6 bits (65), Expect = 4.1 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 4/95 (4%) Frame = +1 Query: 160 ETLATKSAISC*TNPGPQKP-AFPNTCQGLNVYCGS---QANYSVVFVTQSGGLQQIHIP 327 +T+++ +A S +P Q P A +T ++Y S N + +QSG I +P Sbjct: 110 QTVSSTAAGSAIVSPMMQSPKALQSTLSSTSMYLDSFQRSPNNILGIPSQSGS---IPLP 166 Query: 328 QVLYSYLQGPTDKTSESISTNKTTDTVRLCLALSI 432 Q S Q + K ++ TN + D +LC +S+ Sbjct: 167 QSRQSQQQSQSQKNDPNMGTNFSQDINQLCSWISM 201
>GPMA_HAEDU (Q7VL28) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 227 Score = 29.3 bits (64), Expect = 5.4 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 119 FNTLYSFLAPQDTNSFHNSDQYIH 48 ++TL LAP D NS HN +Y H Sbjct: 116 YDTLPPLLAPSDPNSAHNDRRYAH 139
>MYB86_ARATH (Q8LPH6) Transcription factor MYB86 (Myb-related protein 86)| (AtMYB86) (Myb homolog 4) (AtMyb4) Length = 352 Score = 29.3 bits (64), Expect = 5.4 Identities = 19/67 (28%), Positives = 30/67 (44%) Frame = +1 Query: 199 NPGPQKPAFPNTCQGLNVYCGSQANYSVVFVTQSGGLQQIHIPQVLYSYLQGPTDKTSES 378 +P KP N Q LNV Q S V +G + +H ++ S QGP + + Sbjct: 122 DPTTHKPLITNELQSLNVI--DQKLTSSEVVKSTGSINNLHDQSMVVSSQQGPWWFPANT 179 Query: 379 ISTNKTT 399 +TN+ + Sbjct: 180 TTTNQNS 186
>N4BP2_HUMAN (Q86UW6) NEDD4-binding protein 2 (EC 3.-.-.-) (N4BP2)| (BCL-3-binding protein) Length = 1770 Score = 28.9 bits (63), Expect = 7.1 Identities = 11/21 (52%), Positives = 17/21 (80%) Frame = -1 Query: 110 LYSFLAPQDTNSFHNSDQYIH 48 +YSFL QD NSF++S ++I+ Sbjct: 161 VYSFLPSQDVNSFNDSSEFIN 181
>YIJ6_YEAST (P40493) Hypothetical 39.4 kDa protein in SGA1-KTR7 intergenic| region Length = 336 Score = 28.5 bits (62), Expect = 9.2 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = +2 Query: 206 VRKNQRFQTLARGLMFTVAHRLTILLCLSPNPVVFNRSIYPKCFIHISRAQLTKLLNLFR 385 V++NQ FQ L +G + T++LC F RSI + +I +T N Sbjct: 51 VKRNQEFQKLNQGKVMPFEKDETLMLC-GEGDFSFARSIVEQNYIESDNLIITSYDNSVN 109 Query: 386 QTKL 397 + KL Sbjct: 110 ELKL 113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,049,826 Number of Sequences: 219361 Number of extensions: 1369524 Number of successful extensions: 2765 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2717 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2764 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)