ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart18h06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK058242.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-H04, full insert sequence Length = 999 Score = 218 bits (110), Expect = 1e-53 Identities = 209/242 (86%) Strand = Plus / Minus Query: 279 tttggtagtaaactatgtctccggtgtcgctaacatagtgatccttcttcaaactccgcg 338 |||||||||| |||| |||||||||||| ||||||||||| || | || || ||| | Sbjct: 790 tttggtagtacactacgtctccggtgtcactaacatagtggtcgctgtttaagctctttg 731 Query: 339 atagcacctggagtaggtggaatgggagaggagccgacttctctggttctttgtagtact 398 |||||| |||| |||||||||||| ||||| || |||||||| ||||||||||| | Sbjct: 730 ctagcacaccaagtaagtggaatgggaggggagctgatttctctggctctttgtagtatt 671 Query: 399 tgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtg 458 | || ||||||||||||||||||||||||||||| |||||||| ||||| |||||||||| Sbjct: 670 ttcccagcactggttttgctgcctcagtcgcctcaacaagatggtaatgtgggatttgtg 611 Query: 459 ggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgt 518 |||||||||||||||||||||| || |||||||||||||||| ||||||||| |||||| Sbjct: 610 ggaaaagatgatgaatgacatgggttccaatgtcatggtgtacgttgttgatccacccgt 551 Query: 519 ag 520 || Sbjct: 550 ag 549
>dbj|AB232382.1| Oryza sativa (japonica cultivar-group) OsFAD7-1 mRNA for plastid omega-3 fatty acid desaturase, complete cds Length = 1755 Score = 212 bits (107), Expect = 9e-52 Identities = 155/171 (90%) Strand = Plus / Minus Query: 350 agtaggtggaatgggagaggagccgacttctctggttctttgtagtacttgccaagcact 409 |||| |||||||||||| ||||| || |||||||| ||||||||||| || || |||||| Sbjct: 1384 agtaagtggaatgggaggggagctgatttctctggctctttgtagtattttcccagcact 1325 Query: 410 ggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatga 469 ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||| Sbjct: 1324 ggttttgctgcctcagtcgcctcaacaagatggtaatgtgggatttgtgggaaaagatga 1265 Query: 470 tgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||||||||| || |||||||||||||||| ||||||||| |||||||| Sbjct: 1264 tgaatgacatgggttccaatgtcatggtgtacgttgttgatccacccgtag 1214
>gb|AY111307.1| Zea mays CL1251_1 mRNA sequence Length = 1636 Score = 186 bits (94), Expect = 5e-44 Identities = 199/234 (85%) Strand = Plus / Minus Query: 279 tttggtagtaaactatgtctccggtgtcgctaacatagtgatccttcttcaaactccgcg 338 |||||||||| |||| |||||||||||||||||||||||| || | ||| || || | | Sbjct: 1306 tttggtagtacactacgtctccggtgtcgctaacatagtggtcttgctttaagctttgtg 1247 Query: 339 atagcacctggagtaggtggaatgggagaggagccgacttctctggttctttgtagtact 398 ||||||| | ||||| | ||||||||| ||||||||| ||||||||||||||||| Sbjct: 1246 ctagcaccccaaacaggtgccacgggagaggacccgacttctttggttctttgtagtact 1187 Query: 399 tgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtg 458 ||||||| || |||||||||||||| |||||||| | ||||| |||||||||||||| | Sbjct: 1186 tgccaagaaccggttttgctgcctcggtcgcctcaatgagatggtaatgcgggatttgag 1127 Query: 459 ggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatca 512 ||||||| ||||| ||||||||||| |||||||||||||| || ||||| |||| Sbjct: 1126 ggaaaaggtgatggatgacatgagttccaatgtcatggtggatattgttaatca 1073
>dbj|D63953.1| Zea mays FAD8 mRNA for fatty acid desaturase, partial cds Length = 1494 Score = 186 bits (94), Expect = 5e-44 Identities = 199/234 (85%) Strand = Plus / Minus Query: 279 tttggtagtaaactatgtctccggtgtcgctaacatagtgatccttcttcaaactccgcg 338 |||||||||| |||| |||||||||||||||||||||||| || | ||| || || | | Sbjct: 1157 tttggtagtacactacgtctccggtgtcgctaacatagtggtcttgctttaagctttgtg 1098 Query: 339 atagcacctggagtaggtggaatgggagaggagccgacttctctggttctttgtagtact 398 ||||||| | ||||| | ||||||||| ||||||||| ||||||||||||||||| Sbjct: 1097 ctagcaccccaaacaggtgccacgggagaggacccgacttctttggttctttgtagtact 1038 Query: 399 tgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtg 458 ||||||| || |||||||||||||| |||||||| | ||||| |||||||||||||| | Sbjct: 1037 tgccaagaaccggttttgctgcctcggtcgcctcaatgagatggtaatgcgggatttgag 978 Query: 459 ggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatca 512 ||||||| ||||| ||||||||||| |||||||||||||| || ||||| |||| Sbjct: 977 ggaaaaggtgatggatgacatgagttccaatgtcatggtggatattgttaatca 924
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 427 cgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgcc 486 |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || || Sbjct: 10052766 cgcctcaacaagatggtaatgtgggatttgtgggaaaagatgatgaatgacatgggttcc 10052825 Query: 487 aatgtcatggtgtatcttgttgatcaacccgtag 520 |||||||||||||| ||||||||| |||||||| Sbjct: 10052826 aatgtcatggtgtacgttgttgatccacccgtag 10052859 Score = 97.6 bits (49), Expect = 3e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 279 tttggtagtaaactatgtctccggtgtcgctaacatagtgatccttcttcaaactccgcg 338 |||||||||| |||| |||||||||||| ||||||||||| || | || || ||| | Sbjct: 10052528 tttggtagtacactacgtctccggtgtcactaacatagtggtcgctgtttaagctctttg 10052587 Query: 339 atagcacctggagtaggtggaatgggagaggagccgacttctctggttctttgtagtact 398 |||||| |||| |||||||||||| ||||| || |||||||| ||||||||||| | Sbjct: 10052588 ctagcacaccaagtaagtggaatgggaggggagctgatttctctggctctttgtagtatt 10052647 Query: 399 tgccaagcactggttttgctgcctcagtc 427 | || |||||||||||||||||||||||| Sbjct: 10052648 ttcccagcactggttttgctgcctcagtc 10052676
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 427 cgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgcc 486 |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || || Sbjct: 102682 cgcctcaacaagatggtaatgtgggatttgtgggaaaagatgatgaatgacatgggttcc 102741 Query: 487 aatgtcatggtgtatcttgttgatcaacccgtag 520 |||||||||||||| ||||||||| |||||||| Sbjct: 102742 aatgtcatggtgtacgttgttgatccacccgtag 102775 Score = 97.6 bits (49), Expect = 3e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 279 tttggtagtaaactatgtctccggtgtcgctaacatagtgatccttcttcaaactccgcg 338 |||||||||| |||| |||||||||||| ||||||||||| || | || || ||| | Sbjct: 102444 tttggtagtacactacgtctccggtgtcactaacatagtggtcgctgtttaagctctttg 102503 Query: 339 atagcacctggagtaggtggaatgggagaggagccgacttctctggttctttgtagtact 398 |||||| |||| |||||||||||| ||||| || |||||||| ||||||||||| | Sbjct: 102504 ctagcacaccaagtaagtggaatgggaggggagctgatttctctggctctttgtagtatt 102563 Query: 399 tgccaagcactggttttgctgcctcagtc 427 | || |||||||||||||||||||||||| Sbjct: 102564 ttcccagcactggttttgctgcctcagtc 102592
>dbj|AB232384.1| Oryza sativa (japonica cultivar-group) OsFAD7-1 gene for plastid omega-3 fatty acid desaturase, complete cds Length = 5636 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Minus Query: 427 cgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgcc 486 |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || || Sbjct: 4557 cgcctcaacaagatggtaatgtgggatttgtgggaaaagatgatgaatgacatgggttcc 4498 Query: 487 aatgtcatggtgtatcttgttgatcaacccgtag 520 |||||||||||||| ||||||||| |||||||| Sbjct: 4497 aatgtcatggtgtacgttgttgatccacccgtag 4464 Score = 91.7 bits (46), Expect = 2e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 350 agtaggtggaatgggagaggagccgacttctctggttctttgtagtacttgccaagcact 409 |||| |||||||||||| ||||| || |||||||| ||||||||||| || || |||||| Sbjct: 4724 agtaagtggaatgggaggggagctgatttctctggctctttgtagtattttcccagcact 4665 Query: 410 ggttttgctgcctcagtc 427 |||||||||||||||||| Sbjct: 4664 ggttttgctgcctcagtc 4647
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 123 bits (62), Expect = 6e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 427 cgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgcc 486 |||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || || Sbjct: 10050887 cgcctcaacaagatggtaatgtgggatttgtgggaaaagatgatgaatgacatgggttcc 10050946 Query: 487 aatgtcatggtgtatcttgttgatcaacccgtag 520 |||||||||||||| ||||||||| |||||||| Sbjct: 10050947 aatgtcatggtgtacgttgttgatccacccgtag 10050980 Score = 97.6 bits (49), Expect = 3e-17 Identities = 124/149 (83%) Strand = Plus / Plus Query: 279 tttggtagtaaactatgtctccggtgtcgctaacatagtgatccttcttcaaactccgcg 338 |||||||||| |||| |||||||||||| ||||||||||| || | || || ||| | Sbjct: 10050649 tttggtagtacactacgtctccggtgtcactaacatagtggtcgctgtttaagctctttg 10050708 Query: 339 atagcacctggagtaggtggaatgggagaggagccgacttctctggttctttgtagtact 398 |||||| |||| |||||||||||| ||||| || |||||||| ||||||||||| | Sbjct: 10050709 ctagcacaccaagtaagtggaatgggaggggagctgatttctctggctctttgtagtatt 10050768 Query: 399 tgccaagcactggttttgctgcctcagtc 427 | || |||||||||||||||||||||||| Sbjct: 10050769 ttcccagcactggttttgctgcctcagtc 10050797
>dbj|D43688.3| Triticum aestivum TaFAD7 mRNA for plastid omega-3 fatty acid desaturase, partial cds Length = 1518 Score = 117 bits (59), Expect = 4e-23 Identities = 113/131 (86%) Strand = Plus / Minus Query: 390 tgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcg 449 |||||||||| || |||||||| || || |||||||||||||| || ||||| ||||||| Sbjct: 994 tgtagtacttccccagcactggcttcgccgcctcagtcgcctccactagatggtaatgcg 935 Query: 450 ggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttga 509 ||||||| ||||||||||| || || || ||||| |||||||||||||| || ||||||| Sbjct: 934 ggatttgcgggaaaagatggtggatcacgtgagtcccaatgtcatggtggatgttgttga 875 Query: 510 tcaacccgtag 520 | |||||||| Sbjct: 874 gccacccgtag 864 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 279 tttggtagtaaactatgtctccggtgtcgctaacatagtg 318 |||||||||| | |||||||||||||||||| || ||||| Sbjct: 1105 tttggtagtagattatgtctccggtgtcgctgacgtagtg 1066
>gb|AY107103.1| Zea mays PCO145451 mRNA sequence Length = 1520 Score = 115 bits (58), Expect = 1e-22 Identities = 208/258 (80%) Strand = Plus / Minus Query: 263 ctcgtttctgactcactttggtagtaaactatgtctccggtgtcgctaacatagtgatcc 322 ||||||| |||||| ||||||||| || | |||||||| || || |||||||| || Sbjct: 1058 ctcgttttcgactcagcttggtagtagaccacatctccggtatcactgacatagtggtct 999 Query: 323 ttcttcaaactccgcgatagcacctggagtaggtggaatgggagaggagccgacttctct 382 | |||||| ||| | | |||||| ||| |||||| | || |||| | ||||||||| Sbjct: 998 tgcttcaagctctgtgccagcacccggaataggtgccacggcagagcacccgacttcttc 939 Query: 383 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 442 || |||||||||||||||||||| || || ||||||||||| |||||||||| ||||| Sbjct: 938 ggctctttgtagtacttgccaagaaccggctttgctgcctcggtcgcctcgatgagatgg 879 Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatc 502 ||||||||||| || ||||| || ||||| ||||||||||| || ||||| || || || Sbjct: 878 taatgcgggatctgagggaagaggtgatggatgacatgagttccgatgtcgtgatggatg 819 Query: 503 ttgttgatcaacccgtag 520 ||||||||| | |||||| Sbjct: 818 ttgttgatccatccgtag 801
>dbj|D63952.1| Zea mays FAD7 mRNA for fatty acid desaturase, partial cds Length = 1069 Score = 109 bits (55), Expect = 9e-21 Identities = 115/135 (85%) Strand = Plus / Minus Query: 386 tctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataa 445 |||||||||||||||||||| || || ||||||||||| |||||||||| ||||| ||| Sbjct: 643 tctttgtagtacttgccaagaaccggctttgctgcctcggtcgcctcgatgagatggtaa 584 Query: 446 tgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttg 505 |||||||| || ||||| || ||||| ||||||||||| || ||||| || || || ||| Sbjct: 583 tgcgggatctgagggaagaggtgatggatgacatgagttccgatgtcgtgatggatgttg 524 Query: 506 ttgatcaacccgtag 520 |||||| | |||||| Sbjct: 523 ttgatccatccgtag 509
>dbj|D84409.1| Zea mays FAD8 gene for fatty acid desaturase, partial cds Length = 3078 Score = 105 bits (53), Expect = 1e-19 Identities = 122/145 (84%) Strand = Plus / Minus Query: 279 tttggtagtaaactatgtctccggtgtcgctaacatagtgatccttcttcaaactccgcg 338 |||||||||| |||| |||||||||||||||||||||||| || | ||| || || | | Sbjct: 2616 tttggtagtacactacgtctccggtgtcgctaacatagtggtcttgctttaagctttgtg 2557 Query: 339 atagcacctggagtaggtggaatgggagaggagccgacttctctggttctttgtagtact 398 ||||||| | ||||| | ||||||||| ||||||||| ||||||||||||||||| Sbjct: 2556 ctagcaccccaaacaggtgccacgggagaggacccgacttctttggttctttgtagtact 2497 Query: 399 tgccaagcactggttttgctgcctc 423 ||||||| || |||||||||||||| Sbjct: 2496 tgccaagaaccggttttgctgcctc 2472 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 ||||| |||||||||||||| |||||||| ||||| ||||||||||| |||||||||||| Sbjct: 2367 agatggtaatgcgggatttgagggaaaaggtgatggatgacatgagttccaatgtcatgg 2308 Query: 497 tgtatcttgttgatca 512 || || ||||| |||| Sbjct: 2307 tggatattgttaatca 2292
>gb|AY135566.1| Betula pendula clone fad3 microsomal omega-3 fatty acid desaturase mRNA, complete cds Length = 1588 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Minus Query: 392 tagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcggg 451 |||||||| |||||||||||||| ||||| | |||||| || || |||||||| || ||| Sbjct: 1185 tagtactttccaagcactggtttagctgcattagtcgcttccactagatgatagtgtggg 1126 Query: 452 atttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgtt 507 ||||| ||||| |||||||| || ||||| |||||||| |||||||| || ||||| Sbjct: 1125 atttgagggaagagatgatgtataacatgggtgccaatatcatggtggatgttgtt 1070
>dbj|AK071185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083P12, full insert sequence Length = 1811 Score = 93.7 bits (47), Expect = 5e-16 Identities = 122/147 (82%) Strand = Plus / Minus Query: 374 gacttctctggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcg 433 ||||||||||| || ||||||| |||| |||||||| ||||||||| || || || Sbjct: 1232 gacttctctggctccctgtagtatctgcccagcactggccttgctgcctttgttgcttct 1173 Query: 434 acaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtca 493 || || |||||||| || ||||| |||||||| || || |||||||| |||||||||||| Sbjct: 1172 acgaggtgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtca 1113 Query: 494 tggtgtatcttgttgatcaacccgtag 520 ||||| || ||||||||| |||||||| Sbjct: 1112 tggtggatgttgttgatccacccgtag 1086
>dbj|D78505.1|RICPA11 Oryza sativa (japonica cultivar-group) mRNA for w-3 fatty acid desaturase, partial cds Length = 1208 Score = 93.7 bits (47), Expect = 5e-16 Identities = 122/147 (82%) Strand = Plus / Minus Query: 374 gacttctctggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcg 433 ||||||||||| || ||||||| | || ||||||||| ||||||||| || || || Sbjct: 662 gacttctctggctccctgtagtatctacccagcactggtcttgctgcctttgttgcttct 603 Query: 434 acaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtca 493 || || |||||||| || ||||| |||||||| || || |||||||| |||||||||||| Sbjct: 602 acgaggtgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtca 543 Query: 494 tggtgtatcttgttgatcaacccgtag 520 ||||| || ||||||||| |||||||| Sbjct: 542 tggtggatgttgttgatccacccgtag 516
>gb|DQ116425.1| Linum usitatissimum fatty acid desaturase 3B (FAD3B) mRNA, complete cds Length = 1328 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Minus Query: 390 tgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcg 449 |||||||||| || ||||| | || ||||||| |||||| || ||||| ||||| || | Sbjct: 1033 tgtagtacttccccagcacgtgcttcgctgcctgagtcgcttccacaaggtgatagtgtg 974 Query: 450 ggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttga 509 | ||||| ||||| ||||| ||||||||||| ||||||||||||||||| || ||||||| Sbjct: 973 gcatttgagggaagagatggtgaatgacatgggtgccaatgtcatggtggatgttgttga 914 Query: 510 tcaacccgta 519 | | |||||| Sbjct: 913 tgaccccgta 904
>gb|DQ116424.1| Linum usitatissimum fatty acid desaturase 3A (FAD3A) mRNA, complete cds Length = 1475 Score = 89.7 bits (45), Expect = 8e-15 Identities = 135/165 (81%) Strand = Plus / Minus Query: 355 gtggaatgggagaggagccgacttctctggttctttgtagtacttgccaagcactggttt 414 ||||||||||| ||| | || |||| |||||| |||||||||| || ||||| | || Sbjct: 1116 gtggaatgggaaaggccctgatttcttcggttctctgtagtacttccccagcacgtgctt 1057 Query: 415 tgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaat 474 ||||||| |||||| ||||| || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 1056 cgctgcctgagtcgcttcgactaggtgatagtgtggcatttgagggaagagatggtgaat 997 Query: 475 gacatgagtgccaatgtcatggtgtatcttgttgatcaacccgta 519 ||||| ||||||||||||||||| || |||||||| | |||||| Sbjct: 996 aacatgggtgccaatgtcatggtggatgttgttgatgaccccgta 952
>ref|XM_479619.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1604 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 413 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 472 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1145 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1086 Query: 473 atgacatgagtgccaatgtcatggtgtatcttgttgatcaaccc 516 |||||||| || || ||||| ||||| || ||||||||| |||| Sbjct: 1085 atgacatgtgtcccgatgtcgtggtggatgttgttgatccaccc 1042
>ref|XM_506593.1| PREDICTED Oryza sativa (japonica cultivar-group), P0034A04.134-2 mRNA Length = 1617 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 413 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 472 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1133 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1074 Query: 473 atgacatgagtgccaatgtcatggtgtatcttgttgatcaaccc 516 |||||||| || || ||||| ||||| || ||||||||| |||| Sbjct: 1073 atgacatgtgtcccgatgtcgtggtggatgttgttgatccaccc 1030
>ref|NM_185577.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1615 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 413 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 472 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1135 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1076 Query: 473 atgacatgagtgccaatgtcatggtgtatcttgttgatcaaccc 516 |||||||| || || ||||| ||||| || ||||||||| |||| Sbjct: 1075 atgacatgtgtcccgatgtcgtggtggatgttgttgatccaccc 1032
>dbj|AB232383.1| Oryza sativa (japonica cultivar-group) OsFAD7-2 mRNA for plastid omega-3 fatty acid desaturase, complete cds Length = 1630 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 413 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 472 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1130 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1071 Query: 473 atgacatgagtgccaatgtcatggtgtatcttgttgatcaaccc 516 |||||||| || || ||||| ||||| || ||||||||| |||| Sbjct: 1070 atgacatgtgtcccgatgtcgtggtggatgttgttgatccaccc 1027
>gb|AY848920.1| Oryza sativa (japonica cultivar-group) FAD8 mRNA, complete cds Length = 1242 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 413 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 472 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1091 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1032 Query: 473 atgacatgagtgccaatgtcatggtgtatcttgttgatcaaccc 516 |||||||| || || ||||| ||||| || ||||||||| |||| Sbjct: 1031 atgacatgtgtcccgatgtcgtggtggatgttgttgatccaccc 988
>dbj|AK098930.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025C20, full insert sequence Length = 1612 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 413 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 472 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1134 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1075 Query: 473 atgacatgagtgccaatgtcatggtgtatcttgttgatcaaccc 516 |||||||| || || ||||| ||||| || ||||||||| |||| Sbjct: 1074 atgacatgtgtcccgatgtcgtggtggatgttgttgatccaccc 1031
>dbj|AK062022.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F12, full insert sequence Length = 1604 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 413 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 472 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1145 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1086 Query: 473 atgacatgagtgccaatgtcatggtgtatcttgttgatcaaccc 516 |||||||| || || ||||| ||||| || ||||||||| |||| Sbjct: 1085 atgacatgtgtcccgatgtcgtggtggatgttgttgatccaccc 1042
>dbj|AK061531.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E06, full insert sequence Length = 1617 Score = 87.7 bits (44), Expect = 3e-14 Identities = 89/104 (85%) Strand = Plus / Minus Query: 413 tttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatga 472 |||||||| || |||||||| | ||||| |||||||||||||| ||||||||||| ||| Sbjct: 1133 tttgctgcttccgtcgcctcaattagatggtaatgcgggatttgggggaaaagatggtga 1074 Query: 473 atgacatgagtgccaatgtcatggtgtatcttgttgatcaaccc 516 |||||||| || || ||||| ||||| || ||||||||| |||| Sbjct: 1073 atgacatgtgtcccgatgtcgtggtggatgttgttgatccaccc 1030
>gb|AY204710.1| Glycine max microsomal omega-3-fatty acid desaturase (FAD3A) mRNA, complete cds; nuclear gene for microsomal product Length = 1242 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Minus Query: 401 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 460 ||||| |||| ||||||||| | ||||| ||||| || |||||||| || ||||| ||| Sbjct: 1029 ccaagaactgattttgctgcttgtgtcgcttcgacgaggtgataatgaggaatttgaggg 970 Query: 461 aaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatc 511 |||||||| ||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 969 aaaagatggtgaataacatgggtgccaatgtcatggtgaatgttattgatc 919
>ref|NM_120640.2| Arabidopsis thaliana FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase AT5G05580 (FAD8) mRNA, complete cds Length = 2037 Score = 83.8 bits (42), Expect = 5e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 383 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 442 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1356 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1297 Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatc 502 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1296 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1237 Query: 503 ttgttgatcaacccgtag 520 || |||||| | |||||| Sbjct: 1236 ttattgatccatccgtag 1219
>gb|AY093304.1| Arabidopsis thaliana temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor (At5g05580) mRNA, complete cds Length = 1402 Score = 83.8 bits (42), Expect = 5e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 383 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 442 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1172 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1113 Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatc 502 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1112 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1053 Query: 503 ttgttgatcaacccgtag 520 || |||||| | |||||| Sbjct: 1052 ttattgatccatccgtag 1035
>gb|AY078043.1| Arabidopsis thaliana AT5g05580/MOP10_12 mRNA, complete cds Length = 1308 Score = 83.8 bits (42), Expect = 5e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 383 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 442 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1172 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1113 Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatc 502 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1112 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1053 Query: 503 ttgttgatcaacccgtag 520 || |||||| | |||||| Sbjct: 1052 ttattgatccatccgtag 1035
>gb|AF361837.1| Arabidopsis thaliana AT5g05580/MOP10_12 mRNA, complete cds Length = 1656 Score = 83.8 bits (42), Expect = 5e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 383 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 442 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1356 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1297 Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatc 502 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1296 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1237 Query: 503 ttgttgatcaacccgtag 520 || |||||| | |||||| Sbjct: 1236 ttattgatccatccgtag 1219
>gb|AY062468.1| Arabidopsis thaliana temperature-sensitive omega-3 fatty acid desaturase, chloroplast precursor (At5g05580; MOP10.12) mRNA, complete cds Length = 1605 Score = 83.8 bits (42), Expect = 5e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 383 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 442 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1291 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1232 Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatc 502 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1231 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1172 Query: 503 ttgttgatcaacccgtag 520 || |||||| | |||||| Sbjct: 1171 ttattgatccatccgtag 1154
>emb|BX831496.1|CNS09ZRR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1516 Score = 83.8 bits (42), Expect = 5e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 383 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 442 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1215 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1156 Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatc 502 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1155 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1096 Query: 503 ttgttgatcaacccgtag 520 || |||||| | |||||| Sbjct: 1095 ttattgatccatccgtag 1078
>dbj|D17578.1|ATHFADIP1 Arabidopsis thaliana mRNA for plastid fatty acid desaturase, complete cds Length = 1621 Score = 83.8 bits (42), Expect = 5e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 383 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 442 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1309 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1250 Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatc 502 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1249 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1190 Query: 503 ttgttgatcaacccgtag 520 || |||||| | |||||| Sbjct: 1189 ttattgatccatccgtag 1172
>gb|L27158.1|ATHFAD8A Arabidopsis thaliana omega-3 fatty acid desaturase (fad8) mRNA, complete cds Length = 1525 Score = 83.8 bits (42), Expect = 5e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 383 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 442 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 1232 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 1173 Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatc 502 ||||| ||||| || |||||||||||||| || |||||||| ||||| || ||||| || Sbjct: 1172 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtggtggatg 1113 Query: 503 ttgttgatcaacccgtag 520 || |||||| | |||||| Sbjct: 1112 ttattgatccatccgtag 1095
>gb|L22963.1|BNACPFADD Brassicca napus chloroplast omega-3 fatty acid desaturase (Fadd) mRNA, complete cds Length = 1416 Score = 83.8 bits (42), Expect = 5e-13 Identities = 96/114 (84%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1043 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgagggaaaaga 984 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| |||||||| || || || ||||||||||| |||||| Sbjct: 983 tgatgtatcacatgagttccaatgtcgtgatggatgttgttgatcaatccgtag 930
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 499 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 226002 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 226061 Query: 500 atcttgttgatcaacccgtag 520 || ||||||||| |||||||| Sbjct: 226062 atgttgttgatccacccgtag 226082
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 499 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 199527 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 199586 Query: 500 atcttgttgatcaacccgtag 520 || ||||||||| |||||||| Sbjct: 199587 atgttgttgatccacccgtag 199607
>gb|AY204712.1| Glycine max microsomal omega-3-fatty acid desaturase (FAD3C) mRNA, complete cds; nuclear gene for microsomal product Length = 1216 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Minus Query: 395 tacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatt 454 ||||| || ||||||| |||||||| | |||||| |||| | ||||||||| || ||| Sbjct: 1012 tactttcctagcactgcctttgctgctttagtcgcttcgattaaatgataatgtggaatt 953 Query: 455 tgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatc 511 || |||||||| ||||| || ||||| ||||||||||||||||| || ||||||||| Sbjct: 952 tgagggaaaaggtgatggataacatgggtgccaatgtcatggtgaatgttgttgatc 896
>dbj|AB051215.2| Glycine max mRNA for microsomal omega-3 fatty acid desaturase, complete cds Length = 1407 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Minus Query: 395 tacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatt 454 ||||| || ||||||| |||||||| | |||||| |||| | ||||||||| || ||| Sbjct: 1023 tactttcctagcactgcctttgctgctttagtcgcttcgattaaatgataatgtggaatt 964 Query: 455 tgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatc 511 || |||||||| ||||| || ||||| ||||||||||||||||| || ||||||||| Sbjct: 963 tgagggaaaaggtgatggataacatgggtgccaatgtcatggtgaatgttgttgatc 907
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 499 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 199527 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 199586 Query: 500 atcttgttgatcaacccgtag 520 || ||||||||| |||||||| Sbjct: 199587 atgttgttgatccacccgtag 199607
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 499 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 226002 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 226061 Query: 500 atcttgttgatcaacccgtag 520 || ||||||||| |||||||| Sbjct: 226062 atgttgttgatccacccgtag 226082
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 499 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 105466 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 105407 Query: 500 atcttgttgatcaacccgtag 520 || ||||||||| |||||||| Sbjct: 105406 atgttgttgatccacccgtag 105386
>emb|BX000491.1|CNS08CDH Oryza sativa chromosome 12, . BAC OSJNBb0068K19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 96667 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 499 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 49254 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 49195 Query: 500 atcttgttgatcaacccgtag 520 || ||||||||| |||||||| Sbjct: 49194 atgttgttgatccacccgtag 49174
>dbj|D78506.1|RICP181X2 Oryza sativa (indica cultivar-group) gene for w-3 fatty acid desaturase, complete cds (exon1-8) Length = 4544 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 499 |||||||| || ||||| |||||||| || || |||||||| ||||||||||||||||| Sbjct: 3786 tgataatgaggaatttgggggaaaaggtggtggatgacatgggtgccaatgtcatggtgg 3727 Query: 500 atcttgttgatcaacccgtag 520 || ||||||||| |||||||| Sbjct: 3726 atgttgttgatccacccgtag 3706
>gb|BT014282.1| Lycopersicon esculentum clone 133516F, mRNA sequence Length = 1525 Score = 79.8 bits (40), Expect = 8e-12 Identities = 79/92 (85%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 ||||| |||||||| | ||||| |||||||| |||||||| || ||||| ||||||||| Sbjct: 1158 actggctttgctgcttttgtcgcttcgacaaggtgataatgtggtatttgagggaaaaga 1099 Query: 467 tgatgaatgacatgagtgccaatgtcatggtg 498 || ||||| |||||||| ||||| |||||||| Sbjct: 1098 tggtgaataacatgagtaccaatatcatggtg 1067
>dbj|AB232385.1| Oryza sativa (japonica cultivar-group) OsFAD7-2 gene for plastid omega-3 fatty acid desaturase, complete cds Length = 5326 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct: 4033 agatggtaatgcgggatttgggggaaaagatggtgaatgacatgtgtcccgatgtcgtgg 3974 Query: 497 tgtatcttgttgatcaaccc 516 || || ||||||||| |||| Sbjct: 3973 tggatgttgttgatccaccc 3954
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct: 29479915 agatggtaatgcgggatttgggggaaaagatggtgaatgacatgtgtcccgatgtcgtgg 29479856 Query: 497 tgtatcttgttgatcaaccc 516 || || ||||||||| |||| Sbjct: 29479855 tggatgttgttgatccaccc 29479836
>dbj|AP005199.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0627E10 Length = 163388 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct: 6587 agatggtaatgcgggatttgggggaaaagatggtgaatgacatgtgtcccgatgtcgtgg 6528 Query: 497 tgtatcttgttgatcaaccc 516 || || ||||||||| |||| Sbjct: 6527 tggatgttgttgatccaccc 6508
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 ||||| |||||||||||||| ||||||||||| ||||||||||| || || ||||| ||| Sbjct: 142837 agatggtaatgcgggatttgggggaaaagatggtgaatgacatgtgtcccgatgtcgtgg 142778 Query: 497 tgtatcttgttgatcaaccc 516 || || ||||||||| |||| Sbjct: 142777 tggatgttgttgatccaccc 142758
>gb|AY204711.1| Glycine max microsomal omega-3-fatty acid desaturase (FAD3B) mRNA, complete cds; nuclear gene for microsomal product Length = 1180 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 401 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 460 ||||| |||||||||||||| | ||||| || || || |||||||| || ||||| ||| Sbjct: 989 ccaagaactggttttgctgcttgtgtcgcttcaacgaggtgataatgaggaatttggggg 930 Query: 461 aaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatc 511 |||||||| || || ||||| ||||||||||||||||| || || |||||| Sbjct: 929 aaaagatggtggataacatgggtgccaatgtcatggtgaatgttattgatc 879
>emb|BX832153.1|CNS09YN7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZC11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 431 Score = 77.8 bits (39), Expect = 3e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 383 ggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgacaagatga 442 |||||| |||||||||| || || |||||||| ||||| || || || || || |||||| Sbjct: 113 ggttctctgtagtactttcctagtactggtttagctgcttctgttgcttctactagatga 54 Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaat 489 ||||| ||||| || |||||||||||||| || |||||||| ||||| Sbjct: 53 taatgtgggatctgcgggaaaagatgatgtatcacatgagttccaat 7
>dbj|AB105887.1| Glycine max Fan mRNA for microsomal omega-3 fatty acid desaturase, complete cds Length = 1131 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 401 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 460 ||||| |||| ||||||||| | ||||| || || || |||||||| || ||||| ||| Sbjct: 974 ccaagaactgattttgctgcttgtgtcgcttcaacgaggtgataatgaggaatttgaggg 915 Query: 461 aaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatc 511 |||||||| ||||| ||||| ||||||||||||||||| || || |||||| Sbjct: 914 aaaagatggtgaataacatgggtgccaatgtcatggtgaatgttattgatc 864
>ref|NM_111953.2| Arabidopsis thaliana FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty acid desaturase AT3G11170 (FAD7) mRNA, complete cds Length = 1825 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1327 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1268 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct: 1267 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtag 1214
>gb|AY592974.1| Brassica napus chloroplast omega-3 fatty acid desaturase mRNA, complete cds; nuclear gene for chloroplast product Length = 1333 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1149 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgagggaaaaga 1090 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| |||| ||| || || || ||||||||||| |||||| Sbjct: 1089 tgatgtatcacatgagttccaacgtcgtgatggatgttgttgatcaatccgtag 1036
>gb|AY102158.1| Arabidopsis thaliana AT3g11170/F9F8_4 mRNA, complete cds Length = 1341 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1169 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1110 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct: 1109 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtag 1056
>dbj|AK220858.1| Arabidopsis thaliana mRNA for omega-3 fatty acid desaturase, chloroplast precursor, complete cds, clone: RAFL22-40-G11 Length = 815 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 458 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 399 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct: 398 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtag 345
>gb|AF389295.1|AF389295 Arabidopsis thaliana AT3g11170/F9F8_4 mRNA, complete cds Length = 1825 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1327 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1268 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct: 1267 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtag 1214
>emb|BX824950.1|CNS0A5PZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZB08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1528 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1212 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1153 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct: 1152 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtag 1099
>emb|BX824183.1|CNS0A5LO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZB09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1513 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1204 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1145 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct: 1144 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtag 1091
>emb|BX823863.1|CNS0A5G7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZC03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1513 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1202 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1143 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct: 1142 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtag 1089
>emb|BX823702.1|CNS0A4NN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1554 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1231 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1172 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct: 1171 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtag 1118
>dbj|AB105886.1| Glycine max Fanx mRNA for microsomal omega-3 fatty acid desaturase, complete cds Length = 1143 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 401 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 460 ||||| |||||||||||||| | ||||| || || || |||||||| || ||||| ||| Sbjct: 986 ccaagaactggttttgctgcttgtgtcgcttcaacgaggtgataatgaggaatttggggg 927 Query: 461 aaaagatgatgaatgacatgagtgccaatgtcatggtg 498 |||||||| || || ||||| ||||||||||||||||| Sbjct: 926 aaaagatggtggataacatgggtgccaatgtcatggtg 889
>dbj|D26019.1|ATHFADIP Arabidopsis thaliana mRNA for plastid fatty acid desaturase, complete cds Length = 1662 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1300 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1241 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct: 1240 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtag 1187
>gb|L22964.1|SOYCPGAD3A Glycine soja chloroplast 3-omega faty acid desaturase (Fad3) mRNA, complete cds Length = 2181 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 401 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 460 ||||| |||||||||||||| | ||||| || || || |||||||| || ||||| ||| Sbjct: 1840 ccaagaactggttttgctgcttgtgtcgcttcaacgaggtgataatgaggaatttggggg 1781 Query: 461 aaaagatgatgaatgacatgagtgccaatgtcatggtg 498 |||||||| || || ||||| ||||||||||||||||| Sbjct: 1780 aaaagatggtggataacatgggtgccaatgtcatggtg 1743
>gb|L22961.1|ATHCPFADD Arabidopsis thaliana chloroplast omega-3 fatty acid desaturase (Fadd) gene, complete cds Length = 1525 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 407 actggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaaga 466 |||||||| ||||| || || || || || ||||||||||| ||||| || ||||||||| Sbjct: 1178 actggtttagctgcttctgttgcttctactagatgataatgtgggatctgcgggaaaaga 1119 Query: 467 tgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || |||||||| ||||| ||||| || || || |||||||| |||||| Sbjct: 1118 tgatgtatcacatgagttccaatatcatgatggatgttattgatcaatccgtag 1065
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 ||||||||||| ||||| || |||||||||||||| || |||||||| ||||| ||||| Sbjct: 14271 agatgataatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcatga 14330 Query: 497 tgtatcttgttgatcaacccgtag 520 || || || |||||||| |||||| Sbjct: 14331 tggatgttattgatcaatccgtag 14354
>gb|AC073395.6|AC073395 Arabidopsis thaliana chromosome 3 BAC F11B9 genomic sequence, complete sequence Length = 103517 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 ||||||||||| ||||| || |||||||||||||| || |||||||| ||||| ||||| Sbjct: 39009 agatgataatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcatga 38950 Query: 497 tgtatcttgttgatcaacccgtag 520 || || || |||||||| |||||| Sbjct: 38949 tggatgttattgatcaatccgtag 38926
>dbj|D14007.1|ATHFAD7 Arabidopsis thaliana fad7 gene for omega-3-desaturase, complete cds Length = 2569 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 ||||||||||| ||||| || |||||||||||||| || |||||||| ||||| ||||| Sbjct: 2120 agatgataatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcatga 2061 Query: 497 tgtatcttgttgatcaacccgtag 520 || || || |||||||| |||||| Sbjct: 2060 tggatgttattgatcaatccgtag 2037
>emb|AJ250316.1|BJU250316 Brassica juncea fad7 gene for chloroplast omega-3 fatty acid desaturase, exons 1-8 Length = 3866 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||||||||| ||||| ||||||||||||||||| || |||||||| |||||||| Sbjct: 3310 agatgataatgtgggatctgtgggaaaagatgatgtatcacatgagttccaatgtc 3255
>dbj|D14410.1|VIRARG1 Vigna radiata auxin-regulated mRNA Length = 1323 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 395 tacttgccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatt 454 ||||| |||||||||| |||||||| | |||||| || || | ||| ||||| || ||| Sbjct: 991 tactttccaagcactgattttgctgatttagtcgcttccaccaaatggtaatgtggaatt 932 Query: 455 tgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 498 || |||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 931 tgagggaaaaggtgatggataacatgggtgccaatgtcatggtg 888
>gb|L22965.1|SOYCPFADD Glycine soja chloroplast omega-3 fatty acid desaturase (Fadd) mRNA, complete cds Length = 1675 Score = 69.9 bits (35), Expect = 8e-09 Identities = 92/111 (82%) Strand = Plus / Minus Query: 401 ccaagcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtggg 460 |||| |||||| || || |||||||| ||||| || | ||||| || || ||||| || Sbjct: 1367 ccaaacactggcttagcagcctcagtagcctcaactaagtgatagtgtggaatttgagga 1308 Query: 461 aaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatc 511 || || |||||||||||||||||||||||||||||||| || || |||||| Sbjct: 1307 aataggtgatgaatgacatgagtgccaatgtcatggtgaatgttattgatc 1257
>emb|AJ250664.1|HVU250664 Hordeum vulgare partial mRNA for omega-3 fatty acid desaturase (bci-8 gene) Length = 495 Score = 67.9 bits (34), Expect = 3e-08 Identities = 85/102 (83%) Strand = Plus / Minus Query: 419 gcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgaca 478 ||||| |||||||| || ||||| |||||||||||||| ||||||||||| | || || Sbjct: 490 gcctcggtcgcctccactagatggtaatgcgggatttgcgggaaaagatggcggatcacg 431 Query: 479 tgagtgccaatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || ||||| ||||| || ||||||| | |||||||| Sbjct: 430 tgagtcccgatgtcgtggtggatgttgttgagccacccgtag 389
>dbj|AB188198.2| Glycine max GmFAD3-2b mRNA for microsomal omega-3 fatty acid desaturase, complete cds Length = 1320 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 439 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 498 ||||||||| || || || |||||||| ||||| || ||||| ||||||||||||||||| Sbjct: 973 atgataatgtggaatctgagggaaaaggtgatggataacatgggtgccaatgtcatggtg 914 Query: 499 tatcttgttgatc 511 || ||||||||| Sbjct: 913 aatgttgttgatc 901
>gb|DQ316783.1| Glycine max cultivar A29 soybean line omega-3 fatty acid desaturase (FAD3C) gene, partial sequence Length = 114 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 439 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 498 ||||||||| || ||||| |||||||| | ||| || ||||| ||||||||||||||||| Sbjct: 76 atgataatgtggaatttgagggaaaaggtaatggataacatgggtgccaatgtcatggtg 17 Query: 499 tatcttgttgatc 511 || ||||||||| Sbjct: 16 aatgttgttgatc 4
>gb|AF020204.1| Pelargonium x hortorum omega-3 desaturase (pxh-15) mRNA, partial cds Length = 1350 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 449 gggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttg 508 |||||||| ||||| ||||| ||||| || |||||||||||||||||||| || |||||| Sbjct: 1012 gggatttgagggaagagatggtgaataacgtgagtgccaatgtcatggtgaatgttgttg 953 Query: 509 a 509 | Sbjct: 952 a 952
>gb|AF517831.2| Prunus persica chloroplast omega-3 desaturase mRNA, complete cds; nuclear gene for chloroplast product Length = 1350 Score = 63.9 bits (32), Expect = 5e-07 Identities = 116/144 (80%) Strand = Plus / Minus Query: 377 ttctctggttctttgtagtacttgccaagcactggttttgctgcctcagtcgcctcgaca 436 |||| ||| ||| |||||||||| |||||||| || || |||||||| || || || || Sbjct: 1214 ttctttggctctctgtagtacttcccaagcacaggcttagctgcctccgttgcttctact 1155 Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 | | ||| || || ||||| ||||| || ||||| |||||||| || ||||||||||| Sbjct: 1154 aagttatagtgtggaatttgagggaacaggtgatgtatgacatgggttccaatgtcatga 1095 Query: 497 tgtatcttgttgatcaacccgtag 520 || || ||||||||||| |||||| Sbjct: 1094 tggatgttgttgatcaatccgtag 1071
>dbj|AB005241.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOP10 Length = 57892 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 ||||||||||| ||||| || |||||||||||||| || |||||||| ||||| || ||| Sbjct: 44663 agatgataatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtgg 44604 Query: 497 tgtatcttgttgatcaacccgtag 520 || || || |||||| | |||||| Sbjct: 44603 tggatgttattgatccatccgtag 44580
>emb|AJ011004.1|AFO011004 Aleurites fordii mRNA homologous to Omega-3 desaturases, complete CDS Length = 1358 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 439 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 498 ||||||||| |||||||| || ||||||||||| || ||||| |||||||| |||||||| Sbjct: 998 atgataatgtgggatttgaggaaaaagatgatggataacatgtgtgccaatatcatggtg 939
>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE Length = 125647 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatg 495 |||||||| || ||||| ||||| |||||||||| |||||||||||||||||||| Sbjct: 93652 tgataatgaggaatttgagggaagagatgatgaacaacatgagtgccaatgtcatg 93597
>gb|AF047172.1|AF047172 Vernicia fordii omega-3 fatty acid desaturase (Fad3) mRNA, complete cds Length = 1358 Score = 63.9 bits (32), Expect = 5e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 439 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 498 ||||||||| |||||||| || ||||||||||| || ||||| |||||||| |||||||| Sbjct: 998 atgataatgtgggatttgaggaaaaagatgatggataacatgtgtgccaatatcatggtg 939
>gb|U08216.1|ATU08216 Arabidopsis thaliana chloroplast linoleate desaturase (fad8) gene, nuclear gene encoding chloroplast protein, complete cds Length = 2541 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 437 agatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatgg 496 ||||||||||| ||||| || |||||||||||||| || |||||||| ||||| || ||| Sbjct: 2082 agatgataatgtgggatctgcgggaaaagatgatgtatcacatgagttccaatatcgtgg 2023 Query: 497 tgtatcttgttgatcaacccgtag 520 || || || |||||| | |||||| Sbjct: 2022 tggatgttattgatccatccgtag 1999
>gb|AY599884.1| Brassica napus omega-3 fatty acid desaturase (fad3) mRNA, complete cds Length = 1178 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 499 ||||| || ||||||||||||||||||||||| || || ||||| |||||||| || || Sbjct: 950 tgatagtgagggatttgtgggaaaagatgatggatcacgtgagttccaatgtcgtgatgg 891 Query: 500 atcttgttga 509 || ||||||| Sbjct: 890 atgttgttga 881
>gb|AY551558.1| Malus x domestica chloroplast omega-3 desaturase mRNA, complete cds; nuclear gene for chloroplast product Length = 1320 Score = 60.0 bits (30), Expect = 8e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 443 taatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatc 502 ||||| |||||||| ||||| |||||||| ||||||||||| || || ||||| || || Sbjct: 1118 taatgtgggatttgagggaagagatgatgtatgacatgagttccgatatcatgatggatg 1059 Query: 503 ttgttgatcaacccgtag 520 ||||||||| | |||||| Sbjct: 1058 ttgttgatccatccgtag 1041
>gb|AY248741.2| Lycopersicon esculentum omega-3 fatty acid desaturase mRNA, complete cds; nuclear gene for chloroplast product Length = 1308 Score = 60.0 bits (30), Expect = 8e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 406 cactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaag 465 ||||||||| || || ||||| || || || | |||||| || |||||||| ||||| || Sbjct: 1149 cactggtttagcagcttcagttgcttctaccaaatgatagtgtgggatttgagggaagag 1090 Query: 466 atgatgaatgacatgagtgccaatgtcatggtgtatcttgtt 507 |||||| || |||||||| || ||||||||||| || ||||| Sbjct: 1089 atgatgtatcacatgagtccctatgtcatggtggatgttgtt 1048
>gb|AY157317.3| Lycopersicon esculentum strain L402 omega-3 fatty acid desaturase (FAD) mRNA, complete cds Length = 1683 Score = 60.0 bits (30), Expect = 8e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 406 cactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaag 465 ||||||||| || || ||||| || || || | |||||| || |||||||| ||||| || Sbjct: 1304 cactggtttagcagcttcagttgcttctaccaaatgatagtgtgggatttgagggaagag 1245 Query: 466 atgatgaatgacatgagtgccaatgtcatggtgtatcttgtt 507 |||||| || |||||||| || ||||||||||| || ||||| Sbjct: 1244 atgatgtatcacatgagtccctatgtcatggtggatgttgtt 1203
>gb|L01418.1|BNALINDES Brassica napa linoleate desaturase (fad3) mRNA, complete cds Length = 1353 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgt 499 ||||| || ||||||||||||||||||||||| || || ||||| |||||||| || || Sbjct: 1027 tgatagtgagggatttgtgggaaaagatgatggatcacgtgagttccaatgtcgtgatgg 968 Query: 500 atcttgttga 509 || ||||||| Sbjct: 967 atgttgttga 958
>dbj|D63954.1| Zea mays FAD7 gene for fatty acid desaturase, complete cds Length = 4970 Score = 60.0 bits (30), Expect = 8e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 427 cgcctcgacaagatgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgcc 486 |||||||| ||||| ||||||||||| || ||||| || ||||| ||||||||||| || Sbjct: 4396 cgcctcgatgagatggtaatgcgggatctgagggaagaggtgatggatgacatgagttcc 4337 Query: 487 aatgtcatggtgtatcttgttgatcaacccgtag 520 ||||| || || || ||||||||| | |||||| Sbjct: 4336 gatgtcgtgatggatgttgttgatccatccgtag 4303 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 386 tctttgtagtacttgccaagcactggttttgctgcctc 423 |||||||||||||||||||| || || ||||||||||| Sbjct: 4532 tctttgtagtacttgccaagaaccggctttgctgcctc 4495
>gb|AY135564.1| Betula pendula clone fad8 omega-3 fatty acid desaturase mRNA, complete cds; nuclear gene for plastid product Length = 1889 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 452 atttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatc 511 ||||| || ||||||||||| |||||||| || ||||| |||||||| || ||||| ||| Sbjct: 1461 atttgaggaaaaagatgatgtatgacatgcgttccaatatcatggtgaatattgttaatc 1402 Query: 512 aacccgtag 520 || |||||| Sbjct: 1401 aatccgtag 1393
>gb|AY248742.1| Lycopersicon esculentum omega-3 fatty acid desaturase gene, complete cds; nuclear gene for chloroplast product Length = 43170 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 439 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 498 |||||| || |||||||| ||||| |||||||| || |||||||| || ||||||||||| Sbjct: 10616 atgatagtgtgggatttgagggaagagatgatgtatcacatgagtccctatgtcatggtg 10557 Query: 499 tatcttgtt 507 || ||||| Sbjct: 10556 gatgttgtt 10548
>emb|AJ007739.1|STU007739 Solanum tuberosum mRNA for w-3 desaturase Length = 1546 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 439 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 498 |||||| || |||||||| ||||| |||||||| || |||||||| || ||||||||||| Sbjct: 1104 atgatagtgtgggatttgagggaagagatgatgtatcacatgagtccctatgtcatggtg 1045 Query: 499 tatcttgtt 507 || ||||| Sbjct: 1044 gatgttgtt 1036
>gb|AY135565.1| Betula pendula clone fad7 omega-3 fatty acid desaturase mRNA, complete cds; nuclear gene for plastid product Length = 1703 Score = 54.0 bits (27), Expect = 5e-04 Identities = 126/159 (79%) Strand = Plus / Minus Query: 352 taggtggaatgggagaggagccgacttctctggttctttgtagtacttgccaagcactgg 411 |||||| |||||||||||| | ||||||| || || |||| ||||| |||| |||||| Sbjct: 1305 taggtgaaatgggagaggaccggacttcttcggctccctgtaatacttcccaaacactgg 1246 Query: 412 ttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatgatg 471 | |||||||| || || || || | || |||||||||||||| ||||| || ||||| Sbjct: 1245 cctagctgcctccgttgcttctactaagtggtaatgcgggatttgagggaataggtgatg 1186 Query: 472 aatgacatgagtgccaatgtcatggtgtatcttgttgat 510 || ||||| || ||||| || ||||| || |||||||| Sbjct: 1185 tatcacatgggtcccaatatcgtggtggatgttgttgat 1147
>gb|AF308978.1|AF308975S4 Brassica rapa subsp. oleifera omega-3 fatty acid desaturase (Fad3) gene, exons 4 through 8, and partial cds Length = 905 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaat 489 ||||| || ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 746 tgatagtgagggatttgtgggaaaagatgatggatcacgtgagttccaat 697
>gb|AF222989.1|AF222989 Capsicum annuum omega-3 fatty acid desaturase (FAD) mRNA, complete cds; nuclear gene for chloroplast product Length = 1562 Score = 52.0 bits (26), Expect = 0.002 Identities = 83/102 (81%) Strand = Plus / Minus Query: 406 cactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaag 465 ||||||||| || || ||||| || || || | |||||| || |||||||| ||||| || Sbjct: 1185 cactggtttagcagcttcagttgcttctaccaaatgatagtgtgggatttgagggaagag 1126 Query: 466 atgatgaatgacatgagtgccaatgtcatggtgtatcttgtt 507 |||||| || ||||| || || ||||||||||| || ||||| Sbjct: 1125 atgatgtatcacatgtgtccctatgtcatggtggatgttgtt 1084
>gb|U25817.1|SIU25817 Sesamum indicum omega-3 fatty acid desaturase mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1622 Score = 52.0 bits (26), Expect = 0.002 Identities = 107/134 (79%) Strand = Plus / Minus Query: 350 agtaggtggaatgggagaggagccgacttctctggttctttgtagtacttgccaagcact 409 |||| ||||||||||||||||||||| || | || || |||| |||||||| || ||| Sbjct: 1242 agtaagtggaatgggagaggagccgattttttgggctccctgtaatacttgcccagtact 1183 Query: 410 ggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaaagatga 469 || || || || ||||| || || | | ||||||||| |||||||| ||||| || ||| Sbjct: 1182 ggcttagcagcttcagtagcttctatcaaatgataatgtgggatttgagggaagaggtga 1123 Query: 470 tgaatgacatgagt 483 || || |||||||| Sbjct: 1122 tgtatcacatgagt 1109
>gb|L22962.1|BNAFAD3A Brasicca napus omega-3 fatty acid desaturase (Fad3) mRNA, complete cds Length = 1336 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaat 489 ||||| || ||||||||||||||||||||||| || || ||||| ||||| Sbjct: 1001 tgatagtgagggatttgtgggaaaagatgatggatcacgtgagttccaat 952
>ref|NM_179808.2| Arabidopsis thaliana FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase AT2G29980 (FAD3) transcript variant AT2G29980.2 mRNA, complete cds Length = 1526 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1119 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 1067
>ref|NM_128552.2| Arabidopsis thaliana FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase AT2G29980 (FAD3) transcript variant AT2G29980.1 mRNA, complete cds Length = 1463 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1056 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 1004
>gb|AY096462.1| Arabidopsis thaliana putative omega-3 fatty acid desaturase (At2g29980) mRNA, complete cds Length = 1192 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 950 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 898
>gb|AY063966.1| Arabidopsis thaliana putative omega-3 fatty acid desaturase (At2g29980) mRNA, complete cds Length = 1443 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1056 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 1004
>gb|AC004680.3| Arabidopsis thaliana chromosome 2 clone F23F1 map m283, complete sequence Length = 88543 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 59092 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 59040
>emb|BX821617.1|CNS0A97U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL59ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 453 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 97 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 45
>emb|BX819659.1|CNS0A84L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS12ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1365 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1001 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 949
>gb|AY254858.1| Helianthus annuus omega-3 fatty acid desaturase (FAD7) mRNA, complete cds; nuclear gene for plastid product Length = 1681 Score = 50.1 bits (25), Expect = 0.007 Identities = 73/89 (82%) Strand = Plus / Minus Query: 404 agcactggttttgctgcctcagtcgcctcgacaagatgataatgcgggatttgtgggaaa 463 ||||| |||||||| ||||| |||||||| | | |||||| || ||||| || || || Sbjct: 1294 agcacaggttttgcagcctccgtcgcctcaattaaatgatagtgtgggatctggggaaag 1235 Query: 464 agatgatgaatgacatgagtgccaatgtc 492 ||||| ||||||||||| || |||||||| Sbjct: 1234 agatggtgaatgacatgtgttccaatgtc 1206
>dbj|D17579.1|ATHFADIER2 Arabidopsis thaliana mRNA for fatty acid desaturase in endoplasmic reticulum, complete cds Length = 1409 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 1032 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 980
>dbj|D26508.1|ATHFAD3 Arabidopsis thaliana fad3 gene for microsomal omega-3 fatty acid desaturase, complete cds Length = 4250 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 3826 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 3774
>gb|AF061027.1|AF061027 Vernicia fordii omega-3 fatty acid desaturase precursor, mRNA, partial cds Length = 1703 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 302 gtgtcgctaacatagtgatccttcttcaa 330 |||||||||||||||||||| |||||||| Sbjct: 1258 gtgtcgctaacatagtgatctttcttcaa 1230
>gb|L22931.1|ATHFADO Arabidopsis thaliana chloroplast omega-r fatty acid desaturase gene, complete cds Length = 1350 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtc 492 ||||| || |||||||||||||| |||||||| || || ||||| |||||||| Sbjct: 995 tgatagtgagggatttgtgggaagagatgatggatcacgtgagttccaatgtc 943
>gb|L25897.1|RCCFAD7A Ricinus communis linoleoyl desaturase (fad7) mRNA, complete cds Length = 1958 Score = 48.1 bits (24), Expect = 0.029 Identities = 60/72 (83%) Strand = Plus / Minus Query: 449 gggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttg 508 |||||||| ||||| ||||||||||| || || || || ||||||||||| || || ||| Sbjct: 1513 gggatttgagggaagagatgatgaataacgtgggttcctatgtcatggtggatgttattg 1454 Query: 509 atcaacccgtag 520 ||| | |||||| Sbjct: 1453 atccatccgtag 1442
>dbj|D84678.1| Triticum aestivum mRNA for omega-3 fatty acid desaturase, complete cds Length = 1590 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 452 atttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgttgatc 511 ||||| ||||| || || || |||||||| ||||||||||||||||| || || |||||| Sbjct: 1057 atttgggggaagaggtggtggatgacatgggtgccaatgtcatggtggatgttattgatc 998
>gb|AC173346.1| Mus musculus BAC clone RP23-42N8 from chromosome 9, complete sequence Length = 219266 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 359 aatgggagaggagccgacttctc 381 ||||||||||||||||||||||| Sbjct: 142849 aatgggagaggagccgacttctc 142871
>gb|AY642536.1| Brassica napus omega-3 fatty acid desaturase mRNA, complete cds Length = 1154 Score = 44.1 bits (22), Expect = 0.45 Identities = 43/50 (86%) Strand = Plus / Minus Query: 440 tgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaat 489 ||||| || ||| ||||||||||||||||||| || || ||||| ||||| Sbjct: 939 tgatagtgaggggtttgtgggaaaagatgatggatcacgtgagttccaat 890
>gb|AF051934.2|AF051934 Homo sapiens chromosome 21 clone PAC 220P20 map 21q22.2, complete sequence Length = 144474 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 gagtaggtggaatgggagagga 370 |||||||||||||||||||||| Sbjct: 72533 gagtaggtggaatgggagagga 72554
>dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10, map 22, complete sequences Length = 196989 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 gagtaggtggaatgggagagga 370 |||||||||||||||||||||| Sbjct: 172133 gagtaggtggaatgggagagga 172154
>emb|AJ229042.1|HS229042 Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22, segment 2/3 Length = 348050 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 gagtaggtggaatgggagagga 370 |||||||||||||||||||||| Sbjct: 158049 gagtaggtggaatgggagagga 158028
>emb|AL163268.2|HS21C068 Homo sapiens chromosome 21 segment HS21C068 Length = 340000 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 gagtaggtggaatgggagagga 370 |||||||||||||||||||||| Sbjct: 41028 gagtaggtggaatgggagagga 41049
>gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence Length = 174437 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 457 tgggaaaagatgatgaatgac 477 ||||||||||||||||||||| Sbjct: 42752 tgggaaaagatgatgaatgac 42732
>emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chromosome X Contains part of the PCDH11X gene for protocadherin 11 X-linked, complete sequence Length = 170805 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 tttacttaagccacaacctcctgag 200 |||||| |||||||||||||||||| Sbjct: 107195 tttactgaagccacaacctcctgag 107219
>gb|AC012067.2|AC012067 Homo sapiens BAC clone RP11-192N14 from Y, complete sequence Length = 164507 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 tttacttaagccacaacctcctgag 200 |||||| |||||||||||||||||| Sbjct: 53240 tttactgaagccacaacctcctgag 53264
>gb|AC004072.1|AC004072 Human Chromosome X clone bWXD342, complete sequence Length = 170658 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 tttacttaagccacaacctcctgag 200 |||||| |||||||||||||||||| Sbjct: 100799 tttactgaagccacaacctcctgag 100775
>gb|U59477.1|PFU59477 Perilla frutescens omega-3 fatty acid desaturase mRNA, complete cds Length = 1797 Score = 42.1 bits (21), Expect = 1.8 Identities = 42/49 (85%) Strand = Plus / Minus Query: 281 tggtagtaaactatgtctccggtgtcgctaacatagtgatccttcttca 329 ||||||||||| || || || ||||| || |||||||||||||| |||| Sbjct: 1516 tggtagtaaacgatatcgcccgtgtcactcacatagtgatcctttttca 1468 Score = 40.1 bits (20), Expect = 7.0 Identities = 47/56 (83%) Strand = Plus / Minus Query: 452 atttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtgtatcttgtt 507 ||||||||||| || ||||| || ||||| || || ||||||||||| || ||||| Sbjct: 1345 atttgtgggaagaggtgatgtataacatgcgtccctatgtcatggtggatgttgtt 1290
>dbj|D79979.1| Nicotiana tabacum mRNA for omega-3 fatty acid desaturase, complete cds Length = 1606 Score = 42.1 bits (21), Expect = 1.8 Identities = 60/73 (82%) Strand = Plus / Minus Query: 439 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 498 |||||| || || ||||| ||||| | |||||| || ||||| || || ||||||||||| Sbjct: 1161 atgatagtgtggaatttgagggaataaatgatgtatcacatgtgttcctatgtcatggtg 1102 Query: 499 tatcttgttgatc 511 || ||||||||| Sbjct: 1101 gatgttgttgatc 1089
>dbj|AB049577.1| Nicotiana tabacum NtFAD7 gene for plastid omega-3 fatty acid desaturase, complete cds Length = 2426 Score = 42.1 bits (21), Expect = 1.8 Identities = 60/73 (82%) Strand = Plus / Minus Query: 439 atgataatgcgggatttgtgggaaaagatgatgaatgacatgagtgccaatgtcatggtg 498 |||||| || || ||||| ||||| | |||||| || ||||| || || ||||||||||| Sbjct: 2038 atgatagtgtggaatttgagggaataaatgatgtatcacatgtgttcctatgtcatggtg 1979 Query: 499 tatcttgttgatc 511 || ||||||||| Sbjct: 1978 gatgttgttgatc 1966
>gb|AC102535.17| Mus musculus chromosome 7, clone RP23-61O11, complete sequence Length = 220003 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tgcttcatgatgtacattca 126 |||||||||||||||||||| Sbjct: 59113 tgcttcatgatgtacattca 59094
>gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome 1, complete sequence Length = 179626 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tttacttaagccacaacctc 195 |||||||||||||||||||| Sbjct: 153341 tttacttaagccacaacctc 153360
>gb|AC121931.2| Mus musculus BAC clone RP24-205H14 from 2, complete sequence Length = 188664 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cttttacaatggtaataatt 88 |||||||||||||||||||| Sbjct: 3536 cttttacaatggtaataatt 3517
>gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete sequence Length = 125772 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 attgctcttttacaatggta 82 |||||||||||||||||||| Sbjct: 72031 attgctcttttacaatggta 72050
>gb|AC165173.2| Zea mays clone ZMMBBb-125O19, complete sequence Length = 157660 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cgccaatccgagatcccagg 152 |||||||||||||||||||| Sbjct: 6228 cgccaatccgagatcccagg 6209
>emb|AL359987.13| Human DNA sequence from clone RP11-596A13 on chromosome 6, complete sequence Length = 189370 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 acttaagccacaacctcctg 198 |||||||||||||||||||| Sbjct: 12904 acttaagccacaacctcctg 12923
>gb|AC096754.2| Homo sapiens BAC clone RP11-498E11 from 4, complete sequence Length = 153004 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 actcactttggtagtaaactatgtctcc 300 |||||||||||||||||| |||||||| Sbjct: 310 actcactttggtagtaaagcatgtctcc 283
>gb|AC107058.4| Homo sapiens BAC clone RP11-633G11 from 4, complete sequence Length = 126135 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 273 actcactttggtagtaaactatgtctcc 300 |||||||||||||||||| |||||||| Sbjct: 124445 actcactttggtagtaaagcatgtctcc 124418
>gb|AC011358.7| Homo sapiens chromosome 5 clone CTC-367D15, complete sequence Length = 201251 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cttttacaatggtaataatt 88 |||||||||||||||||||| Sbjct: 132930 cttttacaatggtaataatt 132949
>gb|AC108163.3| Homo sapiens BAC clone RP11-694K14 from 4, complete sequence Length = 95304 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ctttacttaagccacaacct 194 |||||||||||||||||||| Sbjct: 44000 ctttacttaagccacaacct 44019
>dbj|AK079277.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530078N02 product:unclassifiable, full insert sequence Length = 2824 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cttttacaatggtaataatt 88 |||||||||||||||||||| Sbjct: 917 cttttacaatggtaataatt 936
>emb|BX511313.20| Mouse DNA sequence from clone RP24-391O14 on chromosome X, complete sequence Length = 178972 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 ttctctggttctttgtagta 396 |||||||||||||||||||| Sbjct: 53806 ttctctggttctttgtagta 53787
>dbj|AK076344.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732447D17 product:unclassifiable, full insert sequence Length = 3490 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cttttacaatggtaataatt 88 |||||||||||||||||||| Sbjct: 897 cttttacaatggtaataatt 916
>gb|AC087896.15|AC087896 Homo sapiens 12q BAC RP11-777K21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 183562 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 acttaagccacaacctcctg 198 |||||||||||||||||||| Sbjct: 52287 acttaagccacaacctcctg 52268
>gb|AC022440.7| Homo sapiens chromosome 5 clone RP11-20O22, complete sequence Length = 117353 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cttttacaatggtaataatt 88 |||||||||||||||||||| Sbjct: 32138 cttttacaatggtaataatt 32119
>gb|AC119917.10| Mus musculus chromosome 8, clone RP24-247M18, complete sequence Length = 174845 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 gtcatggtgtatcttgttga 509 |||||||||||||||||||| Sbjct: 9978 gtcatggtgtatcttgttga 9959
>gb|AC102544.14| Mus musculus chromosome 8, clone RP23-118B13, complete sequence Length = 224946 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 gtcatggtgtatcttgttga 509 |||||||||||||||||||| Sbjct: 15612 gtcatggtgtatcttgttga 15631
>emb|BX088595.7| Zebrafish DNA sequence from clone DKEY-218B7 in linkage group 6, complete sequence Length = 143341 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tggtaataattcactagtta 97 |||||||||||||||||||| Sbjct: 6603 tggtaataattcactagtta 6622
>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3), anthocyanin biosynthesis regulatory protein Pl1_B73 (Z576C20.4), putative growth-regulating factor 1 (Z576C20.6), and putative aminoalcoholphosphotransferase (Z576C20.14) genes, complete cds; and putative receptor protein kinase (Z576C20.21) gene, partial cds Length = 155173 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cgccaatccgagatcccagg 152 |||||||||||||||||||| Sbjct: 564 cgccaatccgagatcccagg 545
>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5), epsilon-COP (Z438D03.6), putative kinase (Z438D03.7), unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes, complete cds Length = 185988 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 cgccaatccgagatcccagg 152 |||||||||||||||||||| Sbjct: 169029 cgccaatccgagatcccagg 169010
>gb|AC116556.14| Mus musculus strain C57BL/6J chromosome 8 clone rp23-184i13, complete sequence Length = 239958 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tttacttaagccacaacctc 195 |||||||||||||||||||| Sbjct: 210946 tttacttaagccacaacctc 210927
>emb|AL928699.9| Mouse DNA sequence from clone RP23-386I18 on chromosome 2, complete sequence Length = 183473 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cttttacaatggtaataatt 88 |||||||||||||||||||| Sbjct: 13059 cttttacaatggtaataatt 13040
>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome Length = 4096345 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 217 tatatatgctaatgtttcatctta 240 |||||||||||||||||| ||||| Sbjct: 1031289 tatatatgctaatgtttcctctta 1031266 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,159,199 Number of Sequences: 3902068 Number of extensions: 4159199 Number of successful extensions: 77304 Number of sequences better than 10.0: 145 Number of HSP's better than 10.0 without gapping: 145 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76894 Number of HSP's gapped (non-prelim): 408 length of query: 520 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 497 effective length of database: 17,143,297,704 effective search space: 8520218958888 effective search space used: 8520218958888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
