Clone Name | rbart18h02 |
---|---|
Clone Library Name | barley_pub |
>emb|Y14203.1|HVY14203 Hordeum vulgare mRNA for oxalate oxidase (HvOxOa) Length = 970 Score = 783 bits (395), Expect = 0.0 Identities = 401/403 (99%) Strand = Plus / Minus Query: 49 aataataagaagcaatacattttaactcctcgcattggtcctgaaggctgaaccgctagg 108 ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 970 aataataagaagcaatacattttaagtcctcgcattggttctgaaggctgaaccgctagg 911 Query: 109 ataacttattcaatcttattactatgaaatgcgagcttatccagaagcttgaatatagtc 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 910 ataacttattcaatcttattactatgaaatgcgagcttatccagaagcttgaatatagtc 851 Query: 169 tcctgtcgagtactattaaattcgcagcatacatggatatatagaattacatattcatat 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 850 tcctgtcgagtactattaaattcgcagcatacatggatatatagaattacatattcatat 791 Query: 229 tgatcatttggggctcatggaagttaagacccaccggcgaacttggacttgagaagttcc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 tgatcatttggggctcatggaagttaagacccaccggcgaacttggacttgagaagttcc 731 Query: 289 acgaccccggcctccacccgaagagccttggtgagcaccggtgtggggatgggcgggttg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 acgaccccggcctccacccgaagagccttggtgagcaccggtgtggggatgggcgggttg 671 Query: 349 gaaccgaagagtgtgagcggcacgaagacgatgccagggttctggctgttgaaggacaca 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 gaaccgaagagtgtgagcggcacgaagacgatgccagggttctggctgttgaaggacaca 611 Query: 409 accatgtaggcttccgtcttaccaacgttgaactggaagtgca 451 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 accatgtaggcttccgtcttaccaacgttgaactggaagtgca 568
>gb|L15737.1|BLYGERMIN Barley germin mRNA, partial cds Length = 603 Score = 335 bits (169), Expect = 7e-89 Identities = 190/197 (96%) Strand = Plus / Minus Query: 255 agacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagc 314 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 603 agacccaccggcgaacttggacttgagaagttccacgactccggcctccacccggagagc 544 Query: 315 cttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaa 374 |||||||||||| || ||||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 543 cttggtgagcacgggcgtggggatgggagggtcggagccgaagagtgtgagcggcacgaa 484 Query: 375 gacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaac 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 gacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaac 424 Query: 435 gttgaactggaagtgca 451 ||||||||||||||||| Sbjct: 423 gttgaactggaagtgca 407
>emb|Y09918.1|TAPSBGER4 T.aestivum mRNA for germin-like protein 4, partial Length = 572 Score = 278 bits (140), Expect = 1e-71 Identities = 185/200 (92%) Strand = Plus / Minus Query: 252 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 311 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 321 ttaagacccaccagcgaacttggacttgagaagttcgacgaccccggcctccacccttag 262 Query: 312 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 371 ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||| Sbjct: 261 tgccttggtgagcaccggcgtggggattggcgggttggaaccgaagagcatgagcggcac 202 Query: 372 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 431 ||| |||||||| |||||||| ||||||||||| |||||||||||||| || |||||||| Sbjct: 201 gaaaacgatgccggggttctgtctgttgaaggaaacaaccatgtaggcctctgtcttacc 142 Query: 432 aacgttgaactggaagtgca 451 |||||||||||||||||||| Sbjct: 141 aacgttgaactggaagtgca 122 Score = 73.8 bits (37), Expect = 4e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 75 tcctcgcattggtcctgaaggctgaaccgctaggataacttattcaatcttattactatg 134 |||||| ||||| ||||||||| |||||| ||| ||||||||||||||||||||| | Sbjct: 497 tcctcgtattggctctgaaggctaaaccgcgaggctaacttattcaatcttattacaact 438 Query: 135 aaatgcgagcttatccagaagcttgaata 163 ||||||||||| | ||||||||||||| Sbjct: 437 gcatgcgagcttagctagaagcttgaata 409
>gb|M63224.1|WHTGERMINA Wheat germin 9f-3.8 gene, complete cds Length = 3761 Score = 254 bits (128), Expect = 2e-64 Identities = 182/200 (91%) Strand = Plus / Minus Query: 252 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 311 |||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||| || Sbjct: 1992 ttaagacccaccagcgaacttggatttgagaagttccacgaccccagcctccacccggag 1933 Query: 312 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 371 ||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 1932 agccttggtgagcaccggtttggggatgggcgggttggagccgaagagcgtgagtggcac 1873 Query: 372 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 431 |||||||| || ||| |||||||||||||| | || |||||| |||| ||||||||||| Sbjct: 1872 gaagacgacgctggggctctggctgttgaagaagacgaccatggaggcctccgtcttacc 1813 Query: 432 aacgttgaactggaagtgca 451 ||||||||||||||||||| Sbjct: 1812 gacgttgaactggaagtgca 1793 Score = 91.7 bits (46), Expect = 2e-15 Identities = 131/156 (83%), Gaps = 5/156 (3%) Strand = Plus / Minus Query: 8 ataattatatattccgcttcaatcaaaagaacaaatatgacaataataagaagcaataca 67 |||||||||||||||| |||||| |||| |||||| ||||| ||||| ||||| |||| Sbjct: 2229 ataattatatattccg-ttcaatgaaaataacaaa---gacaaaaataaaaagcagtaca 2174 Query: 68 ttttaactcctcgcattggtcctgaaggctgaaccgctaggataacttattcaatcttat 127 ||| || || ||| |||||| | ||||||||||| || ||| |||||||||||||||||| Sbjct: 2173 tttcaattcatcgtattggttccgaaggctgaactgcgaggttaacttattcaatcttat 2114 Query: 128 tactatgaaatgcgagcttatccagaagcttgaata 163 ||| | ||| ||||||| ||||||||||||||| Sbjct: 2113 tacaactgcatg-gagcttaaccagaagcttgaata 2079
>gb|U01963.1|HVU01963 Hordeum vulgare CM 72 germin subunit mRNA, complete cds Length = 1006 Score = 254 bits (128), Expect = 2e-64 Identities = 182/200 (91%) Strand = Plus / Minus Query: 252 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 311 |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 767 ttaaaacccagcggcgaacttggacttgagaagttccacgacccctgcctccacccggag 708 Query: 312 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 371 ||||||||||||||||| || ||||| |||||||| || |||||||| ||||||||||| Sbjct: 707 cgccttggtgagcaccggcgtcgggataggcgggtttgagccgaagagcgtgagcggcac 648 Query: 372 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 431 ||||||||||||||||| |||||||||||||| || |||||| |||| ||||||||||| Sbjct: 647 aaagacgatgccagggttttggctgttgaaggagacgaccatggaggcctccgtcttacc 588 Query: 432 aacgttgaactggaagtgca 451 ||||||||||||||||||| Sbjct: 587 gacgttgaactggaagtgca 568
>emb|Y09916.1|TAPSBGER2 T.aestivum mRNA for germin-like protein 2, partial Length = 764 Score = 246 bits (124), Expect = 5e-62 Identities = 181/200 (90%) Strand = Plus / Minus Query: 252 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 311 |||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 506 ttaaaacccagcggcgaacttggacttgagtagttccacgaccccggcctccacccggag 447 Query: 312 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 371 ||||||||||||||||| || |||||||| || ||||| |||||||| |||| ||||| Sbjct: 446 cgccttggtgagcaccggcgttgggatgggtggattggagccgaagagcatgagtggcac 387 Query: 372 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 431 |||||||||||| |||||||||||||||||||| || |||||| |||| || |||||||| Sbjct: 386 gaagacgatgccggggttctggctgttgaaggagacgaccatggaggcctcggtcttacc 327 Query: 432 aacgttgaactggaagtgca 451 |||||||||||||||||||| Sbjct: 326 aacgttgaactggaagtgca 307 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 taacttattcaatcttattac 130 ||||||||||||||||||||| Sbjct: 633 taacttattcaatcttattac 613 Score = 40.1 bits (20), Expect = 6.1 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 9 taattatatattccgcttcaatcaaaagaacaaatatgacaataataagaag 60 ||||||||||||| | || ||| ||||||||||| | |||||||| |||||| Sbjct: 729 taattatatattcagttt-aatgaaaagaacaaagacgacaataaaaagaag 679
>gb|M21962.1|WHTGAMINA Triticum aestivum germin protein precursor, mRNA, complete cds Length = 1012 Score = 246 bits (124), Expect = 5e-62 Identities = 181/200 (90%) Strand = Plus / Minus Query: 252 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 311 |||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||| || Sbjct: 760 ttaaaacccagcggcaaacttggacttgagaagttccacgaccctggcctccacccggag 701 Query: 312 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 371 ||||||||||||||||| || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 700 tgccttggtgagcaccggcgttgggatgggcgggttggagccgaagagcgtgaggggcac 641 Query: 372 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 431 |||||| ||||| |||||||||||||||||||| || |||||| |||| || |||||||| Sbjct: 640 gaagacaatgccggggttctggctgttgaaggagacgaccatggaggcctcggtcttacc 581 Query: 432 aacgttgaactggaagtgca 451 ||||||||||||||||||| Sbjct: 580 gacgttgaactggaagtgca 561
>gb|M63223.1|WHTGERMIN Wheat germin 9f-2.8 gene, complete cds Length = 2822 Score = 246 bits (124), Expect = 5e-62 Identities = 181/200 (90%) Strand = Plus / Minus Query: 252 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 311 |||| ||||| |||| |||||||||||||||||||||||||||| |||||||||||| || Sbjct: 2473 ttaaaacccagcggcaaacttggacttgagaagttccacgaccctggcctccacccggag 2414 Query: 312 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 371 ||||||||||||||||| || ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 2413 tgccttggtgagcaccggcgttgggatgggcgggttggagccgaagagcgtgaggggcac 2354 Query: 372 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 431 |||||| ||||| |||||||||||||||||||| || |||||| |||| || |||||||| Sbjct: 2353 gaagacaatgccggggttctggctgttgaaggagacgaccatggaggcctcggtcttacc 2294 Query: 432 aacgttgaactggaagtgca 451 ||||||||||||||||||| Sbjct: 2293 gacgttgaactggaagtgca 2274
>emb|AJ492381.1|LPE492381 Lolium perenne mRNA for oxalate oxidase 4 (oxO4 gene) Length = 828 Score = 224 bits (113), Expect = 2e-55 Identities = 170/189 (89%) Strand = Plus / Minus Query: 263 cggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagccttggtga 322 |||| ||||||||||||||||||||||||||||| || ||||| || || |||||||||| Sbjct: 661 cggcaaacttggacttgagaagttccacgaccccagcatccacacggagcgccttggtga 602 Query: 323 gcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgatgc 382 ||||||| || ||||| || |||||||||||||||| |||||| ||||| |||||||||| Sbjct: 601 gcaccggcgtcgggatcggtgggttggaaccgaagactgtgagtggcacaaagacgatgc 542 Query: 383 cagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaact 442 | |||||||||||||||||||||||||||||| | || |||||||| ||||||||||||| Sbjct: 541 ctgggttctggctgttgaaggacacaaccatggatgcctccgtcttgccaacgttgaact 482 Query: 443 ggaagtgca 451 | ||||||| Sbjct: 481 gaaagtgca 473
>emb|Y09917.1|TAPSBGER3 T.aestivum mRNA for germin-like protein 3 Length = 1027 Score = 220 bits (111), Expect = 3e-54 Identities = 181/203 (89%), Gaps = 6/203 (2%) Strand = Plus / Minus Query: 252 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 311 |||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||| || Sbjct: 734 ttaagacccaccagcgaagttggatttgagaagttccacgaccccagcctccacccggag 675 Query: 312 agccttggtgagcaccggtgtggggatgggcgggttggaacc---gaagagtgtgagcgg 368 ||||||||||||||||||||||||||||||||||||||| || |||||| |||| | Sbjct: 674 agccttggtgagcaccggtgtggggatgggcgggttggatccgaagaagagcgtga---g 618 Query: 369 cacgaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtctt 428 |||||||||||| || |||||||||||||||||||| || |||||| |||| | ||||| Sbjct: 617 cacgaagacgattccggggttctggctgttgaaggagacgaccatggaggcatgtgtctt 558 Query: 429 accaacgttgaactggaagtgca 451 ||| ||||||||||||||||||| Sbjct: 557 accgacgttgaactggaagtgca 535
>emb|Y09915.1|TAPSBGER1 T.aestivum mRNA for germin-like protein 1 Length = 856 Score = 216 bits (109), Expect = 5e-53 Identities = 179/201 (89%), Gaps = 1/201 (0%) Strand = Plus / Minus Query: 252 ttaagacccaccggcgaacttggacttgagaagttccacgacccc-ggcctccacccgaa 310 |||| ||||||| |||||||||||||||| |||||| |||||||| |||||| | || | Sbjct: 762 ttaaaacccaccagcgaacttggacttgaaaagttcgacgacccctggcctctatcctta 703 Query: 311 gagccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggca 370 | ||||||||||||||||| ||||| ||| ||||||||||||||| | |||||||||| Sbjct: 702 gcgccttggtgagcaccggcgtgggattggccgggttggaaccgaaaaaagtgagcggca 643 Query: 371 cgaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttac 430 |||| || ||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 642 cgaaaacaatgccggggttctggctgttgaaggaaacaaccatgtaggcttccgtcttac 583 Query: 431 caacgttgaactggaagtgca 451 ||||| ||||||||||||||| Sbjct: 582 caacgatgaactggaagtgca 562
>emb|AJ492380.1|LPE492380 Lolium perenne mRNA for oxalate oxidase 2 (oxO2 gene) Length = 867 Score = 216 bits (109), Expect = 5e-53 Identities = 169/189 (89%) Strand = Plus / Minus Query: 263 cggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagccttggtga 322 |||| ||||||||||||||||||||||||||||| || ||| | || || |||||||||| Sbjct: 661 cggcaaacttggacttgagaagttccacgaccccagcatccgcacggagcgccttggtga 602 Query: 323 gcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgatgc 382 ||||||| || ||||| || |||||||||||||||| |||||| ||||| |||||||||| Sbjct: 601 gcaccggcgtcgggatcggtgggttggaaccgaagactgtgagtggcacaaagacgatgc 542 Query: 383 cagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaact 442 | |||||||||||||||||||||||||||||| | || |||||||| ||||||||||||| Sbjct: 541 ctgggttctggctgttgaaggacacaaccatggatgcctccgtcttgccaacgttgaact 482 Query: 443 ggaagtgca 451 | ||||||| Sbjct: 481 gaaagtgca 473
>emb|AJ504848.1|LPE504848 Lolium perenne mRNA for oxalate oxidase (oxo3 gene) Length = 868 Score = 214 bits (108), Expect = 2e-52 Identities = 165/184 (89%) Strand = Plus / Minus Query: 268 aacttggacttgagaagttccacgaccccggcctccacccgaagagccttggtgagcacc 327 ||||||||||||||||||||||||||||| || ||||| || || |||||||||||||| Sbjct: 656 aacttggacttgagaagttccacgaccccagcgtccacacggagtgccttggtgagcacg 597 Query: 328 ggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgatgccaggg 387 || || ||||| ||||| ||||||||||||| ||||| ||||||||||||||||| ||| Sbjct: 596 ggcgtagggatcggcggattggaaccgaagaccgtgagaggcacgaagacgatgcctggg 537 Query: 388 ttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaactggaag 447 |||||||| |||||||||||||||||| | || |||||||| |||||||||||||||||| Sbjct: 536 ttctggctattgaaggacacaaccatggatgcctccgtcttgccaacgttgaactggaag 477 Query: 448 tgca 451 |||| Sbjct: 476 tgca 473
>emb|AJ556991.1|TAE556991 Triticum aestivum mRNA for oxalate oxidase precursor (OXO1 gene) Length = 675 Score = 198 bits (100), Expect = 1e-47 Identities = 175/200 (87%) Strand = Plus / Minus Query: 252 ttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaag 311 |||| ||||| |||| ||||||||||| |||||||| ||||||||||||||||||| || Sbjct: 675 ttaaaacccagcggcaaacttggacttcagaagttcgacgaccccggcctccacccttag 616 Query: 312 agccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcac 371 |||||||||||||||||| || |||||||| |||||||| | ||||||||| | ||||| Sbjct: 615 agccttggtgagcaccggcgtcgggatgggtgggttggagctgaagagtgtcaatggcac 556 Query: 372 gaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttacc 431 ||||||||| || |||||||||||||||||||| || |||||| | || || |||||||| Sbjct: 555 gaagacgataccggggttctggctgttgaaggagactaccatggatgcctcggtcttacc 496 Query: 432 aacgttgaactggaagtgca 451 ||||||||||| ||||||| Sbjct: 495 gacgttgaactgcaagtgca 476
>ref|XM_469349.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 196 bits (99), Expect = 4e-47 Identities = 171/195 (87%) Strand = Plus / Minus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 ||||||||| |||||||||||| || || || ||||| ||||| |||||||| || |||| Sbjct: 679 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 620 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || ||||||||| || |||||||| |||||||| ||||| | ||||||||| ||||||| Sbjct: 619 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 560 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||||||||||||||||||||||||||| |||||| ||| |||||||| || |||| Sbjct: 559 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 500 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 499 tgaactggaagtgca 485
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 196 bits (99), Expect = 4e-47 Identities = 171/195 (87%) Strand = Plus / Plus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 ||||||||| |||||||||||| || || || ||||| ||||| |||||||| || |||| Sbjct: 27487933 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 27487992 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || ||||||||| || |||||||| |||||||| ||||| | ||||||||| ||||||| Sbjct: 27487993 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 27488052 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||||||||||||||||||||||||||| |||||| ||| |||||||| || |||| Sbjct: 27488053 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 27488112 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 27488113 tgaactggaagtgca 27488127 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Plus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 27499857 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 27499916 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 27499917 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 27499976 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 27499977 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 27500036 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 27500037 tgaactggaagtgca 27500051 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Plus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 27496876 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 27496935 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 27496936 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 27496995 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 27496996 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 27497055 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 27497056 tgaactggaagtgca 27497070 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 321 gagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgat 380 ||||||||| || ||||||||||||||||| || || | ||||||||| ||||||||||| Sbjct: 27492601 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 27492660 Query: 381 gccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaa 440 |||||||||||| |||||||||||||| |||||| ||| |||||||| || || ||||| Sbjct: 27492661 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 27492720 Query: 441 ctggaagtgca 451 ||||||||||| Sbjct: 27492721 ctggaagtgca 27492731 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 acgaccccggcctccacccg 308 |||||||||||||||||||| Sbjct: 27191395 acgaccccggcctccacccg 27191414
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 196 bits (99), Expect = 4e-47 Identities = 171/195 (87%) Strand = Plus / Plus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 ||||||||| |||||||||||| || || || ||||| ||||| |||||||| || |||| Sbjct: 27579256 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 27579315 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || ||||||||| || |||||||| |||||||| ||||| | ||||||||| ||||||| Sbjct: 27579316 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 27579375 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||||||||||||||||||||||||||| |||||| ||| |||||||| || |||| Sbjct: 27579376 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 27579435 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 27579436 tgaactggaagtgca 27579450 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Plus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 27591180 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 27591239 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 27591240 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 27591299 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 27591300 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 27591359 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 27591360 tgaactggaagtgca 27591374 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Plus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 27588199 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 27588258 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 27588259 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 27588318 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 27588319 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 27588378 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 27588379 tgaactggaagtgca 27588393 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Plus Query: 321 gagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgat 380 ||||||||| || ||||||||||||||||| || || | ||||||||| ||||||||||| Sbjct: 27583924 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 27583983 Query: 381 gccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaa 440 |||||||||||| |||||||||||||| |||||| ||| |||||||| || || ||||| Sbjct: 27583984 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 27584043 Query: 441 ctggaagtgca 451 ||||||||||| Sbjct: 27584044 ctggaagtgca 27584054 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 acgaccccggcctccacccg 308 |||||||||||||||||||| Sbjct: 27282718 acgaccccggcctccacccg 27282737
>gb|AC120508.3| Oryza sativa chromosome 3 BAC OSJNBb0021O11 genomic sequence, complete sequence Length = 123406 Score = 196 bits (99), Expect = 4e-47 Identities = 171/195 (87%) Strand = Plus / Minus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 ||||||||| |||||||||||| || || || ||||| ||||| |||||||| || |||| Sbjct: 62581 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 62522 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || ||||||||| || |||||||| |||||||| ||||| | ||||||||| ||||||| Sbjct: 62521 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 62462 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||||||||||||||||||||||||||| |||||| ||| |||||||| || |||| Sbjct: 62461 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 62402 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 62401 tgaactggaagtgca 62387 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 53638 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 53579 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 53578 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 53519 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 53518 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 53459 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 53458 tgaactggaagtgca 53444 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 50657 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 50598 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 50597 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 50538 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 50537 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 50478 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 50477 tgaactggaagtgca 50463 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Minus Query: 321 gagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgat 380 ||||||||| || ||||||||||||||||| || || | ||||||||| ||||||||||| Sbjct: 57913 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 57854 Query: 381 gccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaa 440 |||||||||||| |||||||||||||| |||||| ||| |||||||| || || ||||| Sbjct: 57853 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 57794 Query: 441 ctggaagtgca 451 ||||||||||| Sbjct: 57793 ctggaagtgca 57783
>dbj|AK103716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137P21, full insert sequence Length = 998 Score = 196 bits (99), Expect = 4e-47 Identities = 171/195 (87%) Strand = Plus / Minus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 ||||||||| |||||||||||| || || || ||||| ||||| |||||||| || |||| Sbjct: 805 acccaccggtgaacttggacttaagcagctcgacgacgccggcgtccacccggagcgcct 746 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || ||||||||| || |||||||| |||||||| ||||| | ||||||||| ||||||| Sbjct: 745 tgacgagcaccggcgtcgggatgggtgggttggagccgaacaatgtgagcgggacgaaga 686 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||||||||||||||||||||||||||| |||||| ||| |||||||| || |||| Sbjct: 685 cgatgccagggttctggctgttgaaggacaccaccatggtggcctccgtcttgccgacgt 626 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 625 tgaactggaagtgca 611
>emb|AJ291825.1|LPE291825 Lolium perenne mRNA for oxalate oxidase (oxO1 gene) Length = 934 Score = 174 bits (88), Expect = 2e-40 Identities = 175/204 (85%) Strand = Plus / Minus Query: 248 gaagttaagacccaccggcgaacttggacttgagaagttccacgaccccggcctccaccc 307 |||||||| |||||||||| ||||| |||||||||||||| ||||||||||| ||||| | Sbjct: 781 gaagttaaaacccaccggcaaacttagacttgagaagttctacgaccccggcatccacac 722 Query: 308 gaagagccttggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcg 367 | || ||||||||||| || | |||||||| || |||||||| || |||| ||||| | Sbjct: 721 ggagcgccttggtgagtacggccgtggggattggtgggttggagccaaagacggtgagtg 662 Query: 368 gcacgaagacgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtct 427 |||| ||||||||||||||||||||||| |||||||| || |||||| | || || |||| Sbjct: 661 gcacaaagacgatgccagggttctggctattgaaggatacgaccatggaagcctctgtct 602 Query: 428 taccaacgttgaactggaagtgca 451 | ||||||||||| |||||||||| Sbjct: 601 tgccaacgttgaattggaagtgca 578
>ref|XM_469352.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1017 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 821 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 762 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 761 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 702 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 701 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 642 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 641 tgaactggaagtgca 627
>ref|XM_469351.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 679 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 620 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 619 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 560 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 559 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 500 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 499 tgaactggaagtgca 485
>dbj|AK059872.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-F02, full insert sequence Length = 1028 Score = 165 bits (83), Expect = 2e-37 Identities = 167/195 (85%) Strand = Plus / Minus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||| |||| ||| ||||||||||| || || || || || || ||||| || || |||| Sbjct: 832 acccgccggtgaatttggacttgagcagctcaactacaccagcatccacgcggagtgcct 773 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 || |||||||| || ||||||||||||||||| ||||| | ||||||||| ||||||| Sbjct: 772 tgacaagcaccggcgtcgggatgggcgggttggagccgaacaatgtgagcgggacgaaga 713 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 ||||||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||||| Sbjct: 712 cgatgccggggttctggctgttgaaggacaccaccatggtggcctccgtcttgccaacgt 653 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 652 tgaactggaagtgca 638
>gb|AF261942.1|AF261942 Zea mays clone AW042316 germin-like protein 2 (GLP2) mRNA, partial cds Length = 591 Score = 149 bits (75), Expect = 9e-33 Identities = 165/195 (84%) Strand = Plus / Minus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||||||||||||||||||||||| || |||||||| | ||| |||||||| || |||| Sbjct: 211 acccaccggcgaacttggacttgatgagatccacgacactggcgtccacccggagcgcct 152 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 ||| ||||||||| |||||||| ||||| ||| ||||| || ||||| |||||||||| Sbjct: 151 tggagagcaccggcgtggggatcggcggagaggagccgaacagcgtgaggggcacgaaga 92 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 |||||| || |||||||||||||| ||||| |||||| ||| ||| ||| || |||| Sbjct: 91 tgatgcccggtttctggctgttgaacgacaccaccatggtggcgtcctccttgccgacgt 32 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 31 tgaactggaagtgca 17
>gb|AY108860.1| Zea mays PCO074541 mRNA sequence Length = 589 Score = 149 bits (75), Expect = 9e-33 Identities = 165/195 (84%) Strand = Plus / Minus Query: 257 acccaccggcgaacttggacttgagaagttccacgaccccggcctccacccgaagagcct 316 |||||||||||||||||||||||| || |||||||| | ||| |||||||| || |||| Sbjct: 242 acccaccggcgaacttggacttgatgagatccacgacactggcgtccacccggagcgcct 183 Query: 317 tggtgagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaaga 376 ||| ||||||||| |||||||| ||||| ||| ||||| || ||||| |||||||||| Sbjct: 182 tggagagcaccggcgtggggatcggcggagaggagccgaacagcgtgaggggcacgaaga 123 Query: 377 cgatgccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgt 436 |||||| || |||||||||||||| ||||| |||||| ||| ||| ||| || |||| Sbjct: 122 tgatgcccggtttctggctgttgaacgacaccaccatggtggcgtcctccttgccgacgt 63 Query: 437 tgaactggaagtgca 451 ||||||||||||||| Sbjct: 62 tgaactggaagtgca 48
>ref|XM_469350.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 141 bits (71), Expect = 2e-30 Identities = 116/131 (88%) Strand = Plus / Minus Query: 321 gagcaccggtgtggggatgggcgggttggaaccgaagagtgtgagcggcacgaagacgat 380 ||||||||| || ||||||||||||||||| || || | ||||||||| ||||||||||| Sbjct: 621 gagcaccggcgtcgggatgggcgggttggagccaaacaatgtgagcgggacgaagacgat 562 Query: 381 gccagggttctggctgttgaaggacacaaccatgtaggcttccgtcttaccaacgttgaa 440 |||||||||||| |||||||||||||| |||||| ||| |||||||| || || ||||| Sbjct: 561 gccagggttctgactgttgaaggacaccaccatggtggcctccgtcttgccgacattgaa 502 Query: 441 ctggaagtgca 451 ||||||||||| Sbjct: 501 ctggaagtgca 491
>emb|AL590445.1|CNS07EGC chromosome V of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 211018 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 147 atccagaagcttgaatatagtctcct 172 |||||||||||||||||||| ||||| Sbjct: 60107 atccagaagcttgaatatagcctcct 60082
>dbj|AB210620.1| Ciona intestinalis mRNA for p38 kinase, complete cds, clone: cinc009m21 Length = 3582 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 cttgagaagttccacgaccccg 297 |||||||||||||||||||||| Sbjct: 987 cttgagaagttccacgaccccg 1008
>dbj|AK173857.1| Ciona intestinalis cDNA, clone:cicl006g22, full insert sequence Length = 1395 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 276 cttgagaagttccacgaccccg 297 |||||||||||||||||||||| Sbjct: 987 cttgagaagttccacgaccccg 1008
>emb|AL450305.7| Human DNA sequence from clone RP11-426L17 on chromosome 6, complete sequence Length = 71463 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 32 aaaagaacaaatatgacaataataa 56 ||||||| ||||||||||||||||| Sbjct: 42576 aaaagaaaaaatatgacaataataa 42600
>emb|AL359894.9| Human DNA sequence from clone RP11-379C1 on chromosome 1 Contains the 5' end of gene KIAA1365 and a CpG island, complete sequence Length = 161040 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 aaatatgacaataataagaagcaat 64 ||||||||||||||||| ||||||| Sbjct: 76576 aaatatgacaataataataagcaat 76600
>gb|AC009379.7| Drosophila melanogaster 3L BAC RP98-48M6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175963 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 aaatcaataattatatattcc 22 ||||||||||||||||||||| Sbjct: 166050 aaatcaataattatatattcc 166030
>gb|AC010563.6| Drosophila melanogaster 3L BAC RP98-9M20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 185497 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 aaatcaataattatatattcc 22 ||||||||||||||||||||| Sbjct: 167675 aaatcaataattatatattcc 167695
>tpg|BK002213.1| TPA: TPA_inf: Drosophila melanogaster HDC10915 (HDC10915) gene, complete cds Length = 2264 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 aaatcaataattatatattcc 22 ||||||||||||||||||||| Sbjct: 1959 aaatcaataattatatattcc 1979
>gb|AC096766.3| Homo sapiens BAC clone RP11-678H22 from 4, complete sequence Length = 173836 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 28 aatcaaaagaacaaatatgac 48 ||||||||||||||||||||| Sbjct: 32054 aatcaaaagaacaaatatgac 32074
>gb|AC091039.7| Homo sapiens chromosome 18, clone RP11-403A5, complete sequence Length = 168148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 204 gatatatagaattacatattcatat 228 ||||||||||||||||||| ||||| Sbjct: 81128 gatatatagaattacatatgcatat 81152
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 375 gacgatgccagggttctggctgttgaagg 403 ||||||||| ||||||| ||||||||||| Sbjct: 19617320 gacgatgccggggttctcgctgttgaagg 19617348
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 213 aattacatattcatattgatc 233 ||||||||||||||||||||| Sbjct: 1216282 aattacatattcatattgatc 1216302
>dbj|AP005110.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0605D08 Length = 144340 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 375 gacgatgccagggttctggctgttgaagg 403 ||||||||| ||||||| ||||||||||| Sbjct: 83606 gacgatgccggggttctcgctgttgaagg 83634
>dbj|AK059817.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-C02, full insert sequence Length = 997 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 375 gacgatgccagggttctggctgttgaagg 403 ||||||||| ||||||| ||||||||||| Sbjct: 621 gacgatgccggggttctcgctgttgaagg 593
>gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67 of 83 of the complete sequence Length = 279088 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 aaatcaataattatatattcc 22 ||||||||||||||||||||| Sbjct: 123720 aaatcaataattatatattcc 123740
>gb|L33781.1|ATHCPBP Arabidopsis thaliana (strain Ecotype RLD) cab3 promoter-binding protein mRNA, complete cds Length = 771 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 430 ccaacgttgaactggaagtgc 450 ||||||||||||||||||||| Sbjct: 127 ccaacgttgaactggaagtgc 107
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 acgaccccggcctccacccg 308 |||||||||||||||||||| Sbjct: 113000 acgaccccggcctccacccg 112981
>gb|AC115777.16| Mus musculus chromosome 6, clone RP23-139O6, complete sequence Length = 216399 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 caataataagaagcaatacatttt 71 ||||||||||| |||||||||||| Sbjct: 192666 caataataagatgcaatacatttt 192643
>gb|AC113224.3| Mus musculus strain C57BL6/J chromosome 6 clone RP23-99C24, complete sequence Length = 198436 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 aatatgacaataataagaagcaat 64 |||||||||||||||| ||||||| Sbjct: 113904 aatatgacaataataataagcaat 113927
>emb|CR931798.8| Mouse DNA sequence from clone RP23-89A4 on chromosome 4, complete sequence Length = 83980 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 203 ggatatatagaattacatattcat 226 |||||||||| ||||||||||||| Sbjct: 70584 ggatatatagcattacatattcat 70607
>emb|Z73427.1|CEF58B3 Caenorhabditis elegans Cosmid F58B3, complete sequence Length = 21948 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 tggatatatagaattacatattca 225 ||||||| |||||||||||||||| Sbjct: 1881 tggatatctagaattacatattca 1858
>ref|XM_961171.1| Plasmodium falciparum 3D7 hypothetical protein (PFF1365c) partial mRNA Length = 30864 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 aacaaatatgacaataataa 56 |||||||||||||||||||| Sbjct: 18442 aacaaatatgacaataataa 18461
>gb|AC165265.2| Mus musculus BAC clone RP23-15M14 from chromosome 13, complete sequence Length = 237830 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 132 atgaaatgcgagcttatccagaag 155 ||||||||| |||||||||||||| Sbjct: 20134 atgaaatgctagcttatccagaag 20111
>gb|BC090585.1| Xenopus tropicalis MGC69392 protein, mRNA (cDNA clone MGC:69392 IMAGE:5335334), complete cds Length = 4198 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 caaaagaacaaatatgacaataat 54 |||||| ||||||||||||||||| Sbjct: 3979 caaaagtacaaatatgacaataat 3956
>emb|AL445705.8| Human DNA sequence from clone RP5-996C2 on chromosome 20 Contains part of a novel gene (KIAA0964), complete sequence Length = 57930 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 tccacccgaagagccttggt 320 |||||||||||||||||||| Sbjct: 33619 tccacccgaagagccttggt 33638
>emb|AL139289.6| Human DNA sequence from clone RP1-92O14 on chromosome 1p33-34.2 Contains the 3' end of the TIE gene for tyrosine kinase with immunoglobulin and epidermal growth factor homology domains, the MPL gene for myeloproliferative leukemia virus oncogene, two novel genes, the CDC20 gene for CDC20 cell division cycle 20 homolog (S. cerevisiae), the ELOVL1 gene for elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 1, the MED8 gene for mediator of RNA polymerase II transcription subunit 8 homolog (yeast) and the 5' end of the gene for a novel protein (LOC149469), complete sequence Length = 90433 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagcttgaatatagtctcct 172 |||||||||||||||||||| Sbjct: 49660 aagcttgaatatagtctcct 49641
>ref|NM_001030377.1| Xenopus tropicalis MGC69392 protein (MGC69392), mRNA Length = 4198 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 caaaagaacaaatatgacaataat 54 |||||| ||||||||||||||||| Sbjct: 3979 caaaagtacaaatatgacaataat 3956
>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5 Length = 337203 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aacaaatatgacaataataa 56 |||||||||||||||||||| Sbjct: 89748 aacaaatatgacaataataa 89729
>emb|AL161559.2|ATCHRIV59 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 59 Length = 199199 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaatcaataattatatatt 20 |||||||||||||||||||| Sbjct: 78863 aaaatcaataattatatatt 78844
>emb|AL031326.1|ATF16G20 Arabidopsis thaliana DNA chromosome 4, BAC clone F16G20 (ESSAII project) Length = 97006 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaatcaataattatatatt 20 |||||||||||||||||||| Sbjct: 37331 aaaatcaataattatatatt 37312
>emb|CR788320.11| Zebrafish DNA sequence from clone DKEY-217F16 in linkage group 13, complete sequence Length = 174497 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 atatatagaattacatattcatat 228 |||||||||||||||||| ||||| Sbjct: 21576 atatatagaattacatatacatat 21553
>emb|AL645727.16| Mouse DNA sequence from clone RP23-20G7 on chromosome 1 Contains a cytochrome c oxidase subunit Vb (Cox5b) pseudogene, a ribosomal protein S2 (Rps2) pseudogene, the 5' end of the Nrp2 gene for neuropilin 2, the 3' end of the gene for an ortholog of human amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 19 (ALS2CR19) and two CpG islands, complete sequence Length = 218427 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 cagggttctggctgttgaag 402 |||||||||||||||||||| Sbjct: 204747 cagggttctggctgttgaag 204766
>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains the gene for a novel protein (zgc:63880), the 3' end of the gene for a novel protein similar to vertebrate KCND2, the 5' end of the ing3 gene for inhibitor of growth family member 3 and a CpG island, complete sequence Length = 200582 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 aataagaagcaatacattttaact 75 ||||| |||||||||||||||||| Sbjct: 180556 aataaaaagcaatacattttaact 180533
>emb|BX284692.14| Zebrafish DNA sequence from clone CH211-282O22 in linkage group 17, complete sequence Length = 162970 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 aggataacttattcaatctt 125 |||||||||||||||||||| Sbjct: 30891 aggataacttattcaatctt 30872
>gb|AC093420.2| Homo sapiens chromosome 1 clone RP11-282K6, complete sequence Length = 193766 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aagcttgaatatagtctcct 172 |||||||||||||||||||| Sbjct: 183638 aagcttgaatatagtctcct 183619
>gb|DQ019763.1| Arctosa cinerea 12S ribosomal RNA gene, partial sequence; mitochondrial Length = 279 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 atcaaaagaacaaatatgacaata 52 ||||||||||||||||| |||||| Sbjct: 175 atcaaaagaacaaatataacaata 152
>ref|NM_069790.1| Caenorhabditis elegans Delta/Serrate/Lag-2 domain family member (dsl-5) (dsl-5) mRNA, complete cds Length = 909 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 tggatatatagaattacatattca 225 ||||||| |||||||||||||||| Sbjct: 63 tggatatctagaattacatattca 86
>gb|AC018680.4|AC018680 Homo sapiens BAC clone RP11-384E2 from 4, complete sequence Length = 181850 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 tgatcatttggggctcatgg 248 |||||||||||||||||||| Sbjct: 50000 tgatcatttggggctcatgg 49981
>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone BACR08I14, complete sequence Length = 190616 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 gtgagcaccggtgtggggatgggc 342 ||||||| |||||||||||||||| Sbjct: 42524 gtgagcagcggtgtggggatgggc 42547
>emb|BX828681.1|CNS0A2IF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL29ZF09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaatcaataattatatatt 20 |||||||||||||||||||| Sbjct: 847 aaaatcaataattatatatt 828
>gb|AC154003.4| Mus musculus 6 BAC RP24-92L16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 200703 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 48 caataataagaagcaatacatttt 71 ||||||||||| |||||||||||| Sbjct: 119748 caataataagatgcaatacatttt 119771
>gb|AC117396.2| Homo sapiens 3 BAC RP11-89E16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147103 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aattacatattcatattgat 232 |||||||||||||||||||| Sbjct: 17740 aattacatattcatattgat 17759
>gb|BT003875.1| Arabidopsis thaliana clone RAFL15-12-J09 (R20589) unknown protein (At4g23410) mRNA, complete cds Length = 1118 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaatcaataattatatatt 20 |||||||||||||||||||| Sbjct: 1062 aaaatcaataattatatatt 1043
>emb|BX571686.2| Carp DNA sequence from clone carpf-C114, complete sequence Length = 30720 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 aagaacaaatatgacaataataag 57 |||||||||||||| ||||||||| Sbjct: 2740 aagaacaaatatgaaaataataag 2763
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete sequence Length = 343833 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 319 gtgagcaccggtgtggggatgggc 342 ||||||| |||||||||||||||| Sbjct: 194828 gtgagcagcggtgtggggatgggc 194851
>gb|AF063866.1|AF063866 Melanoplus sanguinipes entomopoxvirus, complete genome Length = 236120 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 214 attacatattcatattgatcattt 237 |||||||||||||||| ||||||| Sbjct: 39218 attacatattcatattcatcattt 39241
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 acttgagaagttccacgacc 294 |||||||||||||||||||| Sbjct: 2624441 acttgagaagttccacgacc 2624460
>emb|BX005261.8| Zebrafish DNA sequence from clone DKEY-20I6 in linkage group 1, complete sequence Length = 228767 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 caaaagaacaaatatgacaa 50 |||||||||||||||||||| Sbjct: 92316 caaaagaacaaatatgacaa 92335
>dbj|AP006107.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29P11, TM0193, complete sequence Length = 102354 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 tacatattcatattgatcat 235 |||||||||||||||||||| Sbjct: 64677 tacatattcatattgatcat 64696 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,145,919 Number of Sequences: 3902068 Number of extensions: 4145919 Number of successful extensions: 86409 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86096 Number of HSP's gapped (non-prelim): 309 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)