ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart18g08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induced protein mRNA, partial cds Length = 1046 Score = 192 bits (97), Expect = 6e-46 Identities = 139/153 (90%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 |||||| ||| |||||||||||||||| ||||| |||||||| || |||||||||||||| Sbjct: 569 tcagcttctgttcttgcatttctccatggccctcggcgcgaggccaatggcttctgatcc 510 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 |||||| ||||| ||||||||||| || |||||||||||||||| || ||||||||||| Sbjct: 509 tttcatgatccgaaggcgcttgcatgattcgacgaacatctcccacggcacgtcgccgac 450 Query: 348 gagcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||||||||| ||||||||||||||||| Sbjct: 449 gagcatccagtcgccctccttgtcctcgtaggt 417
>ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 707 Score = 184 bits (93), Expect = 1e-43 Identities = 129/141 (91%) Strand = Plus / Minus Query: 237 gctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctttcattat 296 ||||||||||||||||| ||||||||| || || || |||||||| || |||||||| || Sbjct: 704 gctcttgcatttctccactgcccttggtgcaaggccaatggcttcagaccctttcatgat 645 Query: 297 ccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatcca 356 |||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 644 tcggaggcgtttgcacgactcgacgaacatctcccacgggacgtcgccgacgagcatcca 585 Query: 357 gtcgccgtccttgtcctcgta 377 ||||||||||||||||||||| Sbjct: 584 gtcgccgtccttgtcctcgta 564
>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full insert sequence Length = 1545 Score = 176 bits (89), Expect = 3e-41 Identities = 137/153 (89%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 |||||| ||| |||||||||||||||||||||| || || || || || ||||||||||| Sbjct: 1086 tcagcttctgttcttgcatttctccattgccctcggtgcaaggccaatagcttctgatcc 1027 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 ||||||||||| ||||||||||| || | || ||||||||||| |||||||||||||| Sbjct: 1026 tttcattatcctaaggcgcttgcatgattcaacaaacatctcccatgggacgtcgccgac 967 Query: 348 gagcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||||||||||||||||||||||||||| Sbjct: 966 gagcatccagtcgccgtccttgtcctcgtaggt 934
>gb|AY103836.1| Zea mays PCO135053 mRNA sequence Length = 1519 Score = 176 bits (89), Expect = 3e-41 Identities = 137/153 (89%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 |||||| ||| |||||||||||||||| |||||||| || || || |||||||||||||| Sbjct: 996 tcagcttctgttcttgcatttctccatggcccttggtgccaggccaatggcttctgatcc 937 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 |||||| ||||| ||||||||||| || |||||||||||||||| || || |||||||| Sbjct: 936 tttcatgatccgaaggcgcttgcatgattcgacgaacatctcccacggcacatcgccgac 877 Query: 348 gagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||| |||||||||||||||||||| Sbjct: 876 gagcatccagtccccgtccttgtcctcgtaggt 844
>dbj|AK069376.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K19, full insert sequence Length = 1230 Score = 129 bits (65), Expect = 7e-27 Identities = 74/77 (96%) Strand = Plus / Minus Query: 304 cgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccg 363 |||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 641 cgcttgcaggactcgacgaacatcttccaggggacgtcgccgacgagcatccagtcgccg 582 Query: 364 tccttgtcctcgtaggt 380 ||||||||||||||||| Sbjct: 581 tccttgtcctcgtaggt 565
>ref|XM_550382.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1054 Score = 103 bits (52), Expect = 4e-19 Identities = 55/56 (98%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 590
>dbj|AK109373.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G03, full insert sequence Length = 1118 Score = 103 bits (52), Expect = 4e-19 Identities = 55/56 (98%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 590
>dbj|AK100800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121G17, full insert sequence Length = 1078 Score = 103 bits (52), Expect = 4e-19 Identities = 55/56 (98%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 592
>dbj|AK069242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010B20, full insert sequence Length = 1089 Score = 103 bits (52), Expect = 4e-19 Identities = 55/56 (98%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 582
>dbj|AK060091.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-D01, full insert sequence Length = 1054 Score = 103 bits (52), Expect = 4e-19 Identities = 55/56 (98%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 645 aacatcttccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 590
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Minus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23119019 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 23118969 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcat 353 |||||| |||||||||||||||||||| Sbjct: 14422838 ctcccatgggacgtcgccgacgagcat 14422812
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Minus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69667 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 69617
>dbj|AK061037.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B07, full insert sequence Length = 1241 Score = 101 bits (51), Expect = 2e-18 Identities = 51/51 (100%) Strand = Plus / Minus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 564
>gb|AY104734.1| Zea mays PCO138559 mRNA sequence Length = 1116 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Minus Query: 319 acgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 652 acgaacatcttccaggggacgtcgccgacgagcatccagtcgccatccttgtcctcgta 594
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 99.6 bits (50), Expect = 6e-18 Identities = 53/54 (98%) Strand = Plus / Plus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25345350 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 25345403 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 334 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 25359886 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctcgtaggt 25359840 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 277 gcttctgatcctttcattatccggaggcgcttgca 311 |||||||||||||||||||||| ||||||||||| Sbjct: 25345144 gcttctgatcctttcattatcctaaggcgcttgca 25345178 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 228 tcagctcctgctcttgcatttctccattgccct 260 |||||| ||| |||||||||||||||||||||| Sbjct: 25344954 tcagcttctgttcttgcatttctccattgccct 25344986
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 99.6 bits (50), Expect = 6e-18 Identities = 53/54 (98%) Strand = Plus / Plus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25273526 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 25273579 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 334 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 25288062 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctcgtaggt 25288016 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 277 gcttctgatcctttcattatccggaggcgcttgca 311 |||||||||||||||||||||| ||||||||||| Sbjct: 25273320 gcttctgatcctttcattatcctaaggcgcttgca 25273354 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 228 tcagctcctgctcttgcatttctccattgccct 260 |||||| ||| |||||||||||||||||||||| Sbjct: 25273130 tcagcttctgttcttgcatttctccattgccct 25273162
>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152914 Score = 99.6 bits (50), Expect = 6e-18 Identities = 53/54 (98%) Strand = Plus / Plus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12160 ctcccatgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 12213 Score = 69.9 bits (35), Expect = 6e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 334 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 26696 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctcgtaggt 26650 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 277 gcttctgatcctttcattatccggaggcgcttgca 311 |||||||||||||||||||||| ||||||||||| Sbjct: 11954 gcttctgatcctttcattatcctaaggcgcttgca 11988 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Plus Query: 228 tcagctcctgctcttgcatttctccattgccct 260 |||||| ||| |||||||||||||||||||||| Sbjct: 11764 tcagcttctgttcttgcatttctccattgccct 11796
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4074626 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 4074673 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtag 378 |||||| ||||||||||||||||||| |||||| || | |||||||||| Sbjct: 4817248 ccagggaacgtcgccgacgagcatccggtcgccctcgtcgtcctcgtag 4817200 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 349 agcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||||| || |||||||| |||||||| Sbjct: 7251203 agcatccagtcaccatccttgtcttcgtaggt 7251172
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41369 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 41416
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 95.6 bits (48), Expect = 1e-16 Identities = 48/48 (100%) Strand = Plus / Plus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21597 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 21644
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 93.7 bits (47), Expect = 4e-16 Identities = 50/51 (98%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5741 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 5691 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 274 atggcttctgatcctttcattatccggaggcgcttgcacgacgcgacgaacatc 327 |||||||| || |||||||| || |||||||| ||||||||| ||||||||||| Sbjct: 6213 atggcttcagaccctttcatgattcggaggcgtttgcacgactcgacgaacatc 6160 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 226 gatcagctcctgctcttgcatttctccattgcccttgg 263 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 6379 gatcagcttcagctcttgcatttctccactgcccttgg 6342
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 4e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24085715 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 24085765 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 334 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 24100814 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctggtaggt 24100768 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 274 atggcttctgatcctttcattatccggaggcgcttgcacgacgcgacgaacatc 327 |||||||| || |||||||| || |||||||| ||||||||| ||||||||||| Sbjct: 24085243 atggcttcagaccctttcatgattcggaggcgtttgcacgactcgacgaacatc 24085296 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtagg 379 ||||||||| ||||||||| ||||||| |||||||||||||||||| |||| Sbjct: 32942713 ctcccagggcacgtcgccggcgagcatgaggtcgccgtccttgtcctcatagg 32942765 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 226 gatcagctcctgctcttgcatttctccattgcccttgg 263 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 24085077 gatcagcttcagctcttgcatttctccactgcccttgg 24085114
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 93.7 bits (47), Expect = 4e-16 Identities = 50/51 (98%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136841 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 136791 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 334 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 123018 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctggtaggt 123064 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 274 atggcttctgatcctttcattatccggaggcgcttgcacgacgcgacgaacatc 327 |||||||| || |||||||| || |||||||| ||||||||| ||||||||||| Sbjct: 137313 atggcttcagaccctttcatgattcggaggcgtttgcacgactcgacgaacatc 137260 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 226 gatcagctcctgctcttgcatttctccattgcccttgg 263 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 137479 gatcagcttcagctcttgcatttctccactgcccttgg 137442
>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene) Length = 1195 Score = 93.7 bits (47), Expect = 4e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 230 agctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctt 289 |||| |||||||||||||||||||| ||||| || || || || ||||| || | ||||| Sbjct: 835 agcttctgctcttgcatttctccatggccctgggtgcaagtccaatggcctcagttcctt 776 Query: 290 tcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacga 349 ||||||| || ||||||||||| || | || ||||||||||| |||||||| || || | Sbjct: 775 tcattatgcgcaggcgcttgcatgatccaacaaacatctcccatgggacgtcaccaacaa 716 Query: 350 gcatccagtcgccgtcctt 368 |||||||||| || ||||| Sbjct: 715 gcatccagtcaccatcctt 697
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 4e-16 Identities = 50/51 (98%) Strand = Plus / Plus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24003184 ctcccacgggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 24003234 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 334 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 24017101 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctggtaggt 24017055 Score = 60.0 bits (30), Expect = 5e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 274 atggcttctgatcctttcattatccggaggcgcttgcacgacgcgacgaacatc 327 |||||||| || |||||||| || |||||||| ||||||||| ||||||||||| Sbjct: 24002712 atggcttcagaccctttcatgattcggaggcgtttgcacgactcgacgaacatc 24002765 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtagg 379 ||||||||| ||||||||| ||||||| |||||||||||||||||| |||| Sbjct: 33033223 ctcccagggcacgtcgccggcgagcatgaggtcgccgtccttgtcctcatagg 33033275 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 226 gatcagctcctgctcttgcatttctccattgcccttgg 263 |||||||| | ||||||||||||||||| ||||||||| Sbjct: 24002546 gatcagcttcagctcttgcatttctccactgcccttgg 24002583
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 87.7 bits (44), Expect = 2e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135040 ccaggggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 135087
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 87.7 bits (44), Expect = 2e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4624573 ccaggggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 4624620 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Minus Query: 337 acgtcgccgacgagcatccagtcgccgtccttgtcctcgtag 378 |||||||||||||||||| |||||| || | |||||||||| Sbjct: 5274561 acgtcgccgacgagcatctggtcgccctcgtcgtcctcgtag 5274520
>dbj|AK100080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001M24, full insert sequence Length = 1204 Score = 87.7 bits (44), Expect = 2e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 684 ccaggggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 637
>dbj|AK061796.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G05, full insert sequence Length = 1201 Score = 87.7 bits (44), Expect = 2e-14 Identities = 47/48 (97%) Strand = Plus / Minus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 681 ccaggggacgtctccgacgagcatccagtcgccgtccttgtcctcgta 634
>dbj|AK111128.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-C09, full insert sequence Length = 956 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 319 acgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtc 365 ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 418 acgaacatctcccagggcacgtcgccgacgagcatccagtcgccgtc 372
>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6 gene) Length = 1206 Score = 81.8 bits (41), Expect = 1e-12 Identities = 113/137 (82%) Strand = Plus / Minus Query: 235 ctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctttcatt 294 ||||||||||||||||||||||| ||||| || || || | ||||| |||||||||||| Sbjct: 1031 ctgctcttgcatttctccattgctcttggtgcaagtccaacagcttcagatcctttcatt 972 Query: 295 atccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatc 354 || || |||||||||| || | || ||||||||||| || || || || || |||||| Sbjct: 971 atgcgcgggcgcttgcatgaatcaacaaacatctcccatggaacatcacccacaagcatc 912 Query: 355 cagtcgccgtccttgtc 371 || ||||| |||||||| Sbjct: 911 caatcgccatccttgtc 895
>ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); transcription factor AT4G14550 (IAA14) mRNA, complete cds Length = 1482 Score = 79.8 bits (40), Expect = 6e-12 Identities = 109/132 (82%) Strand = Plus / Minus Query: 247 ttctccattgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgc 306 ||||||||||| ||||| || || || || ||||| |||||||||||||| || | || Sbjct: 764 ttctccattgctcttggagcaagtccaattgcttcggatcctttcattatgcgcaaacgt 705 Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| |||||| ||||||||| || || |||||||||||||| || || Sbjct: 704 ttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatccagtcaccatct 645 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 644 ttgtcctcgtag 633
>gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, complete cds Length = 687 Score = 79.8 bits (40), Expect = 6e-12 Identities = 109/132 (82%) Strand = Plus / Minus Query: 247 ttctccattgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgc 306 ||||||||||| ||||| || || || || ||||| |||||||||||||| || | || Sbjct: 668 ttctccattgctcttggagcaagtccaattgcttcggatcctttcattatgcgcaaacgt 609 Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| |||||| ||||||||| || || |||||||||||||| || || Sbjct: 608 ttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatccagtcaccatct 549 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 548 ttgtcctcgtag 537
>gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, partial cds Length = 732 Score = 79.8 bits (40), Expect = 6e-12 Identities = 109/132 (82%) Strand = Plus / Minus Query: 247 ttctccattgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgc 306 ||||||||||| ||||| || || || || ||||| |||||||||||||| || | || Sbjct: 476 ttctccattgctcttggagcaagtccaattgcttcggatcctttcattatgcgcaaacgt 417 Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| |||||| ||||||||| || || |||||||||||||| || || Sbjct: 416 ttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatccagtcaccatct 357 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 356 ttgtcctcgtag 345
>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds Length = 943 Score = 75.8 bits (38), Expect = 9e-11 Identities = 122/150 (81%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 |||||| ||| ||||||||||||||| ||| ||||| || || || ||||| || ||||| Sbjct: 783 tcagcttctgttcttgcatttctccactgctcttggtgctagtccaatggcctcagatcc 724 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 ||||||||||| | ||| ||||| || | || ||||||||||| || || || || || Sbjct: 723 tttcattatccttaagcgtttgcatgaatcaacaaacatctcccaaggtacatcaccaac 664 Query: 348 gagcatccagtcgccgtccttgtcctcgta 377 ||||||||||| || |||||||| ||||| Sbjct: 663 aagcatccagtctccatccttgtcttcgta 634
>gb|AY137964.1| Mirabilis jalapa clone MSR-193 Aux/IAA4 mRNA, partial cds Length = 157 Score = 71.9 bits (36), Expect = 1e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||||||| || || || |||||||||||||| ||||||||||| ||||| Sbjct: 69 gaacatctcccaggggacatctccaacaagcatccagtcgccatccttgtcctcataggt 10
>emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH21ZC02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1476 Score = 71.9 bits (36), Expect = 1e-09 Identities = 108/132 (81%) Strand = Plus / Minus Query: 247 ttctccattgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgc 306 ||||||||||| ||||| || || || || ||||| |||||||||||||| | | || Sbjct: 757 ttctccattgctcttggagcaagtccaattgcttcggatcctttcattatgcccaaacgt 698 Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| |||||| ||||||||| || || |||||||||||||| || || Sbjct: 697 ttgcatgactcgacaaacatcggccaggggacatcaccaacgagcatccagtcaccatct 638 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 637 ttgtcctcgtag 626
>dbj|AK073361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E22, full insert sequence Length = 1165 Score = 71.9 bits (36), Expect = 1e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 647 gaacatctcgaatgggacgtcgccgacgagcatgaggtcgccgtccttgtcctcgtaggt 588
>ref|NM_189655.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 717 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 316 gcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcg 375 |||| |||||||| |||||| ||||||||||||||||||| |||||| || | ||||||| Sbjct: 617 gcgatgaacatctgccagggaacgtcgccgacgagcatccggtcgccctcgtcgtcctcg 558 Query: 376 tag 378 ||| Sbjct: 557 tag 555
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtc 365 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 20341144 ctcccagggcacgtcgccgacgagcatccagtcgccgtc 20341182
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 69.9 bits (35), Expect = 6e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtc 365 ||||||||| ||||||||||||||||||||||||||||| Sbjct: 120271 ctcccagggcacgtcgccgacgagcatccagtcgccgtc 120309
>dbj|AK100314.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078N13, full insert sequence Length = 1795 Score = 69.9 bits (35), Expect = 6e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 316 gcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcg 375 |||| |||||||| |||||| ||||||||||||||||||| |||||| || | ||||||| Sbjct: 1249 gcgatgaacatctgccagggaacgtcgccgacgagcatccggtcgccctcgtcgtcctcg 1190 Query: 376 tag 378 ||| Sbjct: 1189 tag 1187
>gb|AY108311.1| Zea mays PCO113729 mRNA sequence Length = 1202 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtagg 379 |||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 642 gaacatctcccatggcacgtcgccggcgagcatgaggtcgccgtccttgtcctcgtagg 584
>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds Length = 301 Score = 67.9 bits (34), Expect = 2e-08 Identities = 112/138 (81%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 |||||| || ||||||||||| || | ||| ||||| || | ||||| ||||||||||| Sbjct: 147 tcagcttctactcttgcatttttcaactgctcttggtgctaatccgatagcttctgatcc 88 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 |||||||| || || || |||||||| |||||||||||||| || |||||||| || Sbjct: 87 cttcattatacgaagacgtttgcacgagttcacgaacatctcccaaggaacgtcgccaac 28 Query: 348 gagcatccagtcgccgtc 365 |||||||| || ||||| Sbjct: 27 aagcatccaatctccgtc 10
>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein Length = 1104 Score = 67.9 bits (34), Expect = 2e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 256 gcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgcttgcacgac 315 |||||||| || || ||||||||||| || || ||||| |||| | ||| ||||| || Sbjct: 750 gcccttggtgcaagaccgatggcttcggaccccttcatgatcctcaagcgtttgcatgaa 691 Query: 316 gcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcg 375 || || ||||||||||| |||||||| || || ||||||||||| || |||||||| ||| Sbjct: 690 gcaacaaacatctcccatgggacgtctccaacaagcatccagtctccatccttgtcttcg 631 Query: 376 ta 377 || Sbjct: 630 ta 629
>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds Length = 884 Score = 67.9 bits (34), Expect = 2e-08 Identities = 121/150 (80%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 |||||| ||| ||||||||||||||| ||| ||||| || || || || || |||||||| Sbjct: 741 tcagcttctgttcttgcatttctccactgctcttggtgctagtccaattgcctctgatcc 682 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 ||||||||||| | ||| ||||| || | || ||||||||||| || || || || || Sbjct: 681 tttcattatccttaagcgtttgcatgaatcaacaaacatctcccaaggtacatcaccaac 622 Query: 348 gagcatccagtcgccgtccttgtcctcgta 377 ||||||||||| || || ||||| ||||| Sbjct: 621 aagcatccagtctccatctttgtcttcgta 592
>ref|NM_100306.2| Arabidopsis thaliana AXR3 (AUXIN RESISTANT 3); transcription factor AT1G04250 (AXR3) mRNA, complete cds Length = 1057 Score = 65.9 bits (33), Expect = 9e-08 Identities = 111/137 (81%) Strand = Plus / Minus Query: 235 ctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctttcatt 294 ||||||||||| |||||||| ||||| || ||||| || ||||| || ||||||||||| Sbjct: 807 ctgctcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatg 748 Query: 295 atccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatc 354 | || | |||||||| | |||||||||| ||| || |||||||||||||||||| Sbjct: 747 agacgtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatc 688 Query: 355 cagtcgccgtccttgtc 371 || || ||||| ||||| Sbjct: 687 caatcaccgtctttgtc 671
>gb|AF336916.1| Arabidopsis thaliana auxin-induced protein, IAA17/AXR3-1 (At1g04250) mRNA, complete cds Length = 690 Score = 65.9 bits (33), Expect = 9e-08 Identities = 111/137 (81%) Strand = Plus / Minus Query: 235 ctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctttcatt 294 ||||||||||| |||||||| ||||| || ||||| || ||||| || ||||||||||| Sbjct: 683 ctgctcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatg 624 Query: 295 atccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatc 354 | || | |||||||| | |||||||||| ||| || |||||||||||||||||| Sbjct: 623 agacgtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatc 564 Query: 355 cagtcgccgtccttgtc 371 || || ||||| ||||| Sbjct: 563 caatcaccgtctttgtc 547
>gb|AY117183.1| Arabidopsis thaliana auxin-induced protein IAA17/AXR3-1 (At1g04250) mRNA, complete cds Length = 721 Score = 65.9 bits (33), Expect = 9e-08 Identities = 111/137 (81%) Strand = Plus / Minus Query: 235 ctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctttcatt 294 ||||||||||| |||||||| ||||| || ||||| || ||||| || ||||||||||| Sbjct: 683 ctgctcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatg 624 Query: 295 atccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatc 354 | || | |||||||| | |||||||||| ||| || |||||||||||||||||| Sbjct: 623 agacgtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatc 564 Query: 355 cagtcgccgtccttgtc 371 || || ||||| ||||| Sbjct: 563 caatcaccgtctttgtc 547
>gb|AY070094.1| Arabidopsis thaliana auxin-induced protein IAA17/AXR3-1 (At1g04250) mRNA, complete cds Length = 1033 Score = 65.9 bits (33), Expect = 9e-08 Identities = 111/137 (81%) Strand = Plus / Minus Query: 235 ctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctttcatt 294 ||||||||||| |||||||| ||||| || ||||| || ||||| || ||||||||||| Sbjct: 765 ctgctcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatg 706 Query: 295 atccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatc 354 | || | |||||||| | |||||||||| ||| || |||||||||||||||||| Sbjct: 705 agacgtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatc 646 Query: 355 cagtcgccgtccttgtc 371 || || ||||| ||||| Sbjct: 645 caatcaccgtctttgtc 629
>dbj|AK221076.1| Arabidopsis thaliana mRNA for putative auxin-induced protein, IAA17/AXR3-1, complete cds, clone: RAFL22-79-F09 Length = 452 Score = 65.9 bits (33), Expect = 9e-08 Identities = 111/137 (81%) Strand = Plus / Minus Query: 235 ctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctttcatt 294 ||||||||||| |||||||| ||||| || ||||| || ||||| || ||||||||||| Sbjct: 210 ctgctcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatg 151 Query: 295 atccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatc 354 | || | |||||||| | |||||||||| ||| || |||||||||||||||||| Sbjct: 150 agacgtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatc 91 Query: 355 cagtcgccgtccttgtc 371 || || ||||| ||||| Sbjct: 90 caatcaccgtctttgtc 74
>gb|AY087284.1| Arabidopsis thaliana clone 33613 mRNA, complete sequence Length = 1021 Score = 65.9 bits (33), Expect = 9e-08 Identities = 111/137 (81%) Strand = Plus / Minus Query: 235 ctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctttcatt 294 ||||||||||| |||||||| ||||| || ||||| || ||||| || ||||||||||| Sbjct: 807 ctgctcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatg 748 Query: 295 atccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatc 354 | || | |||||||| | |||||||||| ||| || |||||||||||||||||| Sbjct: 747 agacgtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatc 688 Query: 355 cagtcgccgtccttgtc 371 || || ||||| ||||| Sbjct: 687 caatcaccgtctttgtc 671
>gb|U49073.1|ATU49073 Arabidopsis thaliana early auxin-induced (IAA17) mRNA, complete cds Length = 971 Score = 65.9 bits (33), Expect = 9e-08 Identities = 111/137 (81%) Strand = Plus / Minus Query: 235 ctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctttcatt 294 ||||||||||| |||||||| ||||| || ||||| || ||||| || ||||||||||| Sbjct: 744 ctgctcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcatg 685 Query: 295 atccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatc 354 | || | |||||||| | |||||||||| ||| || |||||||||||||||||| Sbjct: 684 agacgtaaacgcttgcatgtatcgacgaacattggccaaggaacgtcgccgacgagcatc 625 Query: 355 cagtcgccgtccttgtc 371 || || ||||| ||||| Sbjct: 624 caatcaccgtctttgtc 608
>ref|NM_113205.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2); transcription factor AT3G23050 (IAA7) transcript variant AT3G23050.1 mRNA, complete cds Length = 1196 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| ||||| ||||| ||||| ||||| |||||||||||||| || || Sbjct: 707 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 648 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 647 ttgtcctcgtag 636
>gb|BT012096.1| Arabidopsis thaliana At3g23050 mRNA sequence Length = 732 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| ||||| ||||| ||||| ||||| |||||||||||||| || || Sbjct: 650 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 591 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 590 ttgtcctcgtag 579
>emb|AM040278.1| Capsicum chinense mRNA for auxin induced protein (aux/iaa gene) Length = 1778 Score = 63.9 bits (32), Expect = 3e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||||||||||||| || ||||| ||||||||||| || ||||| |||||||| Sbjct: 1222 aacatctcccaggggacatcaccgactagcatccagtccccatccttatcctcgta 1167
>gb|AY072461.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 782 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| ||||| ||||| ||||| ||||| |||||||||||||| || || Sbjct: 650 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 591 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 590 ttgtcctcgtag 579
>gb|AY054651.1| Arabidopsis thaliana auxin-responsive protein IAA7 (At3g23050; MXC7.8) mRNA, complete cds Length = 935 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| ||||| ||||| ||||| ||||| |||||||||||||| || || Sbjct: 705 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 646 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 645 ttgtcctcgtag 634
>gb|AF332395.1| Arabidopsis thaliana clone C00014 (o) indoleacetic acid-inducible protein IAA7 (At3g23050) mRNA, complete cds Length = 732 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| ||||| ||||| ||||| ||||| |||||||||||||| || || Sbjct: 650 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 591 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 590 ttgtcctcgtag 579
>emb|BX825560.1|CNS0A534 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZG09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| ||||| ||||| ||||| ||||| |||||||||||||| || || Sbjct: 648 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 589 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 588 ttgtcctcgtag 577
>gb|AY087765.1| Arabidopsis thaliana clone 38286 mRNA, complete sequence Length = 1195 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| ||||| ||||| ||||| ||||| |||||||||||||| || || Sbjct: 707 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 648 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 647 ttgtcctcgtag 636
>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA7 gene) Length = 1178 Score = 63.9 bits (32), Expect = 3e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 285 tcctttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgcc 344 |||||||||||| || || |||||||| || | || ||||| ||||| ||||| || || Sbjct: 705 tcctttcattattcgcagccgcttgcatgattcaacaaacatgtcccatgggacatcacc 646 Query: 345 gacgagcatccagtcgccgtcctt 368 ||||||||||||||| |||||||| Sbjct: 645 gacgagcatccagtcaccgtcctt 622 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 230 agctcctgctcttgcatttctccat 254 |||| |||||||||||||||||||| Sbjct: 853 agcttctgctcttgcatttctccat 829
>gb|U18409.1|ATU18409 Arabidopsis thaliana IAA7 (IAA7) gene, complete cds Length = 899 Score = 63.9 bits (32), Expect = 3e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| ||||| ||||| ||||| ||||| |||||||||||||| || || Sbjct: 672 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagtcaccatct 613 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 612 ttgtcctcgtag 601
>ref|NM_185060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 588 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtagg 379 |||||| |||||||| ||||||||| ||||||| |||||||||||||||||| |||| Sbjct: 537 gaacatgtcccagggcacgtcgccggcgagcatgaggtcgccgtccttgtcctcatagg 479
>ref|XM_468971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1095 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 334 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 716 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctggtaggt 670
>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds Length = 478 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||||| ||||| || ||||| ||||||||||| || ||||||||||| ||||| Sbjct: 293 aacatctcccatgggacatcaccgacaagcatccagtcaccatccttgtcctcataggt 235
>dbj|AK073044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001E11, full insert sequence Length = 1097 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 334 gggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 718 gggacgtcgccgacgagcatgaggtcgccgtccttgtcctggtaggt 672
>dbj|AK059619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-G11, full insert sequence Length = 1128 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtagg 379 |||||| |||||||| ||||||||| ||||||| |||||||||||||||||| |||| Sbjct: 602 gaacatgtcccagggcacgtcgccggcgagcatgaggtcgccgtccttgtcctcatagg 544
>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds Length = 1784 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||||| ||||| || ||||| ||||||||||| || ||||||||||| ||||| Sbjct: 1143 aacatctcccatgggacatcaccgacaagcatccagtcaccatccttgtcctcataggt 1085
>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete sequence Length = 151479 Score = 58.0 bits (29), Expect = 2e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtagg 379 ||||||||| ||||||||| ||||||| |||||||||||||||||| |||| Sbjct: 47462 ctcccagggcacgtcgccggcgagcatgaggtcgccgtccttgtcctcatagg 47410
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtag 378 |||||| ||||||||||||||||||| |||||| || | |||||||||| Sbjct: 61897 ccagggaacgtcgccgacgagcatccggtcgccctcgtcgtcctcgtag 61849
>gb|AY107725.1| Zea mays PCO106440 mRNA sequence Length = 1176 Score = 58.0 bits (29), Expect = 2e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 320 cgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtagg 379 |||||||||| | || ||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 734 cgaacatctcgaacggcacgtctccgacgagcatgaggtcgccgtccttgtcctcgtagg 675 Query: 380 t 380 | Sbjct: 674 t 674
>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16) mRNA, complete cds Length = 1279 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 255 tgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgcttgcacga 314 ||||||||| || || ||||| ||||||||||| |||||||| || | || ||||| || Sbjct: 871 tgcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatga 812 Query: 315 cgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgcc 362 | || ||||||||||| || ||||| || || |||||||||||||| Sbjct: 811 atcaacaaacatctcccacggtacgtctcctacaagcatccagtcgcc 764
>ref|NM_202626.1| Arabidopsis thaliana IAA7 (AUXIN RESISTANT 2) AT3G23050 (IAA7) transcript variant AT3G23050.2 mRNA, complete cds Length = 990 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtag 378 |||||| ||||| ||||| |||||||||||||| || || |||||||||||| Sbjct: 687 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtcctcgtag 636
>gb|BT013567.1| Lycopersicon esculentum clone 132305F, mRNA sequence Length = 1626 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||||||||||||| || ||||| ||||||||||| || ||||| || ||||| Sbjct: 1191 aacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcgta 1136
>emb|AJ937282.1| Lycopersicon esculentum partial mRNA for Aux/IAA protein (iaa9 gene) Length = 1752 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||||||||||||| || ||||| ||||||||||| || ||||| || ||||| Sbjct: 1190 aacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcgta 1135
>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds Length = 711 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 255 tgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgcttgcacga 314 ||||||||| || || ||||| ||||||||||| |||||||| || | || ||||| || Sbjct: 684 tgcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatga 625 Query: 315 cgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgcc 362 | || ||||||||||| || ||||| || || |||||||||||||| Sbjct: 624 atcaacaaacatctcccacggtacgtctcctacaagcatccagtcgcc 577
>gb|DQ115325.1| Lycopersicon esculentum AUX/IAA protein (IAA4) mRNA, complete cds Length = 1707 Score = 56.0 bits (28), Expect = 9e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||||||||||||| || ||||| ||||||||||| || ||||| || ||||| Sbjct: 1191 aacatctcccaggggacatcaccgacaagcatccagtccccatccttatcttcgta 1136
>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds Length = 1261 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 255 tgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgcttgcacga 314 ||||||||| || || ||||| ||||||||||| |||||||| || | || ||||| || Sbjct: 867 tgcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatga 808 Query: 315 cgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgcc 362 | || ||||||||||| || ||||| || || |||||||||||||| Sbjct: 807 atcaacaaacatctcccacggtacgtctcctacaagcatccagtcgcc 760
>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds, clone: RAFL22-51-M14 Length = 519 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 255 tgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgcttgcacga 314 ||||||||| || || ||||| ||||||||||| |||||||| || | || ||||| || Sbjct: 224 tgcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatga 165 Query: 315 cgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgcc 362 | || ||||||||||| || ||||| || || |||||||||||||| Sbjct: 164 atcaacaaacatctcccacggtacgtctcctacaagcatccagtcgcc 117
>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16 (At3g04730) mRNA, complete cds Length = 711 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 255 tgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgcttgcacga 314 ||||||||| || || ||||| ||||||||||| |||||||| || | || ||||| || Sbjct: 684 tgcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatga 625 Query: 315 cgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgcc 362 | || ||||||||||| || ||||| || || |||||||||||||| Sbjct: 624 atcaacaaacatctcccacggtacgtctcctacaagcatccagtcgcc 577
>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZF01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1096 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 255 tgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgcttgcacga 314 ||||||||| || || ||||| ||||||||||| |||||||| || | || ||||| || Sbjct: 826 tgcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatga 767 Query: 315 cgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgcc 362 | || ||||||||||| || ||||| || || |||||||||||||| Sbjct: 766 atcaacaaacatctcccacggtacgtctcctacaagcatccagtcgcc 719
>emb|BX822145.1|CNS0A5ZY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB16ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1329 Score = 56.0 bits (28), Expect = 9e-05 Identities = 61/72 (84%) Strand = Plus / Minus Query: 307 ttgcacgacgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtcc 366 ||||| ||| |||| ||||| ||||| ||||| ||||| ||||||||||||| || || Sbjct: 951 ttgcaagactcgacaaacatttcccatgggacatcgccaacgagcatccagttaccatct 892 Query: 367 ttgtcctcgtag 378 |||||||||||| Sbjct: 891 ttgtcctcgtag 880
>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1234 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 255 tgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgcttgcacga 314 ||||||||| || || ||||| ||||||||||| |||||||| || | || ||||| || Sbjct: 855 tgcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatga 796 Query: 315 cgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgcc 362 | || ||||||||||| || ||||| || || |||||||||||||| Sbjct: 795 atcaacaaacatctcccacggtacgtctcctacaagcatccagtcgcc 748
>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence Length = 1140 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 255 tgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgcttgcacga 314 ||||||||| || || ||||| ||||||||||| |||||||| || | || ||||| || Sbjct: 871 tgcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatga 812 Query: 315 cgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgcc 362 | || ||||||||||| || ||||| || || |||||||||||||| Sbjct: 811 atcaacaaacatctcccacggtacgtctcctacaagcatccagtcgcc 764
>dbj|AB026655.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXC7 Length = 79284 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtag 378 |||||| ||||| ||||| |||||||||||||| || || |||||||||||| Sbjct: 36825 ctcccatgggacatcgccaacgagcatccagtcaccatctttgtcctcgtag 36774
>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds Length = 1169 Score = 56.0 bits (28), Expect = 9e-05 Identities = 88/108 (81%) Strand = Plus / Minus Query: 255 tgcccttggcgcgagcccgatggcttctgatcctttcattatccggaggcgcttgcacga 314 ||||||||| || || ||||| ||||||||||| |||||||| || | || ||||| || Sbjct: 850 tgcccttggagcaagtccgattgcttctgatcccttcattattcgtatacgtttgcatga 791 Query: 315 cgcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgcc 362 | || ||||||||||| || ||||| || || |||||||||||||| Sbjct: 790 atcaacaaacatctcccacggtacgtctcctacaagcatccagtcgcc 743
>gb|AY289600.1| Pinus taeda auxin-induced protein 1 (IAA1) mRNA, complete cds Length = 1209 Score = 54.0 bits (27), Expect = 3e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 ||||| ||||||||||| ||||| || ||||||||||| || |||||||| || ||||| Sbjct: 665 aacatatcccaggggacatcgcctacaagcatccagtctccatccttgtcttcataggt 607
>gb|AY103603.1| Zea mays PCO094169 mRNA sequence Length = 1576 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||| || ||||||||||| |||||||| || || |||||||||||||| Sbjct: 642 ctcccatggtacgtcgccgacaagcatccaatctccatccttgtcctcgta 592
>emb|AJ417876.1|NTA417876 Nicotiana tabacum mRNA for IAA9 protein Length = 1675 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtc 359 ||||||||||||||||| || ||||| ||||||||||| Sbjct: 1153 aacatctcccaggggacatcaccgacaagcatccagtc 1116
>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1 Length = 206606 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtag 378 ||||||||| || || |||||||||||||| || || |||||||||||| Sbjct: 107012 ccaggggacatcaccaacgagcatccagtcaccatctttgtcctcgtag 107060
>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39 Length = 197976 Score = 50.1 bits (25), Expect = 0.005 Identities = 43/49 (87%) Strand = Plus / Plus Query: 330 ccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtag 378 ||||||||| || || |||||||||||||| || || |||||||||||| Sbjct: 52508 ccaggggacatcaccaacgagcatccagtcaccatctttgtcctcgtag 52556
>emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA2 gene) Length = 1763 Score = 50.1 bits (25), Expect = 0.005 Identities = 46/53 (86%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctc 374 |||||||||||||| || ||||| || ||||||||||| ||||| || ||||| Sbjct: 1191 aacatctcccagggaacatcgccaacaagcatccagtctccgtctttatcctc 1139
>dbj|AK068232.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149D08, full insert sequence Length = 3103 Score = 50.1 bits (25), Expect = 0.005 Identities = 31/33 (93%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcat 353 ||||| |||||| |||||||||||||||||||| Sbjct: 2585 gaacagctcccatgggacgtcgccgacgagcat 2553
>ref|NM_188615.1| Oryza sativa (japonica cultivar-group), Ozsa8218 predicted mRNA Length = 846 Score = 48.1 bits (24), Expect = 0.021 Identities = 51/60 (85%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||| || || || || || ||||||||||| || |||||||| |||||||| Sbjct: 753 gaacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgtaggt 694
>ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA Length = 811 Score = 48.1 bits (24), Expect = 0.021 Identities = 114/144 (79%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 ||||||| || ||||| | || ||| |||| ||||| || || || |||||||| || || Sbjct: 811 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 752 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 ||||| |||| | ||| ||||| ||| |||| ||||||| ||| ||||| || || || Sbjct: 751 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaac 692 Query: 348 gagcatccagtcgccgtccttgtc 371 ||||||||||| || |||||||| Sbjct: 691 aagcatccagtcaccatccttgtc 668
>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene) Length = 1068 Score = 48.1 bits (24), Expect = 0.021 Identities = 114/144 (79%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 ||||||| || ||||| | || ||| |||| ||||| || || || |||||||| || || Sbjct: 863 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 804 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 ||||| |||| | ||| ||||| ||| |||| ||||||| ||| ||||| || || || Sbjct: 803 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaac 744 Query: 348 gagcatccagtcgccgtccttgtc 371 ||||||||||| || |||||||| Sbjct: 743 aagcatccagtcaccatccttgtc 720
>dbj|AK104654.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C04, full insert sequence Length = 1209 Score = 48.1 bits (24), Expect = 0.021 Identities = 51/60 (85%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||| || || || || || ||||||||||| || |||||||| |||||||| Sbjct: 737 gaacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgtaggt 678
>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full insert sequence Length = 1092 Score = 48.1 bits (24), Expect = 0.021 Identities = 114/144 (79%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 ||||||| || ||||| | || ||| |||| ||||| || || || |||||||| || || Sbjct: 873 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 814 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 ||||| |||| | ||| ||||| ||| |||| ||||||| ||| ||||| || || || Sbjct: 813 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaac 754 Query: 348 gagcatccagtcgccgtccttgtc 371 ||||||||||| || |||||||| Sbjct: 753 aagcatccagtcaccatccttgtc 730
>dbj|AK072001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094L17, full insert sequence Length = 1291 Score = 48.1 bits (24), Expect = 0.021 Identities = 51/60 (85%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||| || || || || || ||||||||||| || |||||||| |||||||| Sbjct: 834 gaacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgtaggt 775
>dbj|AK066156.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054L16, full insert sequence Length = 1194 Score = 48.1 bits (24), Expect = 0.021 Identities = 51/60 (85%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||| || || || || || ||||||||||| || |||||||| |||||||| Sbjct: 785 gaacatctcccatggaacatcaccaaccagcatccagtcaccatccttgtcttcgtaggt 726
>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full insert sequence Length = 1180 Score = 48.1 bits (24), Expect = 0.021 Identities = 114/144 (79%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 ||||||| || ||||| | || ||| |||| ||||| || || || |||||||| || || Sbjct: 868 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 809 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 ||||| |||| | ||| ||||| ||| |||| ||||||| ||| ||||| || || || Sbjct: 808 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaac 749 Query: 348 gagcatccagtcgccgtccttgtc 371 ||||||||||| || |||||||| Sbjct: 748 aagcatccagtcaccatccttgtc 725
>ref|XM_476071.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 732 Score = 46.1 bits (23), Expect = 0.082 Identities = 53/63 (84%) Strand = Plus / Minus Query: 316 gcgacgaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcg 375 |||| |||||| | ||| || |||||||||||||||||| |||||| || | ||||||| Sbjct: 641 gcgatgaacatgttccatggcacgtcgccgacgagcatctggtcgccctcgtcgtcctcg 582 Query: 376 tag 378 ||| Sbjct: 581 tag 579
>ref|XM_507049.1| PREDICTED Oryza sativa (japonica cultivar-group), P0643F09.36-2 mRNA Length = 1298 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 346 acgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||| || ||| ||||||||||||| Sbjct: 829 acgagcatccagtcaccatccctgtcctcgtaggt 795
>ref|XM_468410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1175 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 346 acgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||| || ||| ||||||||||||| Sbjct: 790 acgagcatccagtcaccatccctgtcctcgtaggt 756
>ref|XM_468411.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1180 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 346 acgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||| || ||| ||||||||||||| Sbjct: 795 acgagcatccagtcaccatccctgtcctcgtaggt 761
>emb|AJ748648.1| Oryza sativa (indica cultivar-group) mRNA for indoleacetic acid-inducible protein homologue Length = 882 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 346 acgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||| || ||| ||||||||||||| Sbjct: 696 acgagcatccagtcaccatccctgtcctcgtaggt 662
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcat 353 |||||| |||||||||||||||||||| Sbjct: 466403 ctcccatgggacgtcgccgacgagcat 466377
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 acgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||| || ||| ||||||||||||| Sbjct: 35092680 acgagcatccagtcaccatccctgtcctcgtaggt 35092714
>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0021M10 Length = 163416 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcat 353 |||||| |||||||||||||||||||| Sbjct: 16012 ctcccatgggacgtcgccgacgagcat 15986
>dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0526E12 Length = 150872 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcat 353 |||||| |||||||||||||||||||| Sbjct: 150713 ctcccatgggacgtcgccgacgagcat 150687
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 acgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||| || ||| ||||||||||||| Sbjct: 153021 acgagcatccagtcaccatccctgtcctcgtaggt 153055
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Plus Query: 346 acgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||| || ||| ||||||||||||| Sbjct: 65843 acgagcatccagtcaccatccctgtcctcgtaggt 65877
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 46.1 bits (23), Expect = 0.082 Identities = 26/27 (96%) Strand = Plus / Minus Query: 327 ctcccaggggacgtcgccgacgagcat 353 |||||| |||||||||||||||||||| Sbjct: 56363 ctcccatgggacgtcgccgacgagcat 56337
>dbj|AK104802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-C05, full insert sequence Length = 1175 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 346 acgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||| || ||| ||||||||||||| Sbjct: 790 acgagcatccagtcaccatccctgtcctcgtaggt 756
>dbj|AK104501.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E07, full insert sequence Length = 1180 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 346 acgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||| || ||| ||||||||||||| Sbjct: 795 acgagcatccagtcaccatccctgtcctcgtaggt 761
>dbj|AK069892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039N11, full insert sequence Length = 1298 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 346 acgagcatccagtcgccgtccttgtcctcgtaggt 380 |||||||||||||| || ||| ||||||||||||| Sbjct: 829 acgagcatccagtcaccatccctgtcctcgtaggt 795
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 107527 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Plus Query: 337 acgtcgccgacgagcatccagtcgccgtccttgtc 371 |||||||||||||||||||| || ||||| ||||| Sbjct: 95615 acgtcgccgacgagcatccaatcaccgtctttgtc 95649 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 tggcttctgatcctttcattatcc 298 ||||||||||||||||||| |||| Sbjct: 104617 tggcttctgatcctttcatgatcc 104594
>dbj|AB026823.1| Cucumis sativus CsIAA3 mRNA for Aux/IAA protein, complete cds Length = 540 Score = 46.1 bits (23), Expect = 0.082 Identities = 35/39 (89%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtc 359 |||||| ||||| || || |||||||||||||||||||| Sbjct: 489 gaacatttcccatggaacatcgccgacgagcatccagtc 451
>dbj|AB026822.1| Cucumis sativus CsIAA2 mRNA for Aux/IAA protein, complete cds Length = 1646 Score = 46.1 bits (23), Expect = 0.082 Identities = 35/39 (89%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtc 359 |||||||||||| ||||| || || |||||||||||||| Sbjct: 1207 gaacatctcccaagggacatcaccaacgagcatccagtc 1169
>gb|AF040632.1|AF040632 Arabidopsis thaliana IAA17/AXR3-1 protein (AXR3) gene, complete cds Length = 2239 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 337 acgtcgccgacgagcatccagtcgccgtccttgtc 371 |||||||||||||||||||| || ||||| ||||| Sbjct: 1269 acgtcgccgacgagcatccaatcaccgtctttgtc 1235
>gb|AF040631.1|AF040631 Arabidopsis thaliana IAA17/AXR3 protein (AXR3) gene, complete cds Length = 2239 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 337 acgtcgccgacgagcatccagtcgccgtccttgtc 371 |||||||||||||||||||| || ||||| ||||| Sbjct: 1269 acgtcgccgacgagcatccaatcaccgtctttgtc 1235
>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071, complete sequence Length = 69786 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 277 gcttctgatcctttcattatccggaggcgcttgca 311 |||||||||||||||||||| || ||||| ||||| Sbjct: 23377 gcttctgatcctttcattattcgcaggcgtttgca 23343
>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds Length = 1187 Score = 46.1 bits (23), Expect = 0.082 Identities = 47/55 (85%) Strand = Plus / Minus Query: 239 tcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcctttcat 293 |||||||||||||||| |||||||| || || || ||||| ||| ||||||||| Sbjct: 813 tcttgcatttctccatagcccttggtgcaagtccaatggcctcttttcctttcat 759
>gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, partial cds Length = 364 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtc 359 ||||||||||| |||||||| || || ||||||||||| Sbjct: 146 aacatctcccaagggacgtctcccactagcatccagtc 109
>gb|AF154652.1| Nicotiana tabacum clone PR39 mRNA sequence Length = 824 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtc 359 ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 739 aacatctcccaagggacatcaccgacaagcatccagtc 702
>dbj|AK111403.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-E05, full insert sequence Length = 1493 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Minus Query: 337 acgtcgccgacgagcatccagtcgccgtccttgtcctcgtag 378 |||||||||||||||||| |||||| || | |||||||||| Sbjct: 959 acgtcgccgacgagcatctggtcgccctcgtcgtcctcgtag 918
>dbj|AK106192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E03, full insert sequence Length = 1249 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 371 ||||||||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 785 aacatctcccatggaacatcgccaacaagcatccagtctccatccttgtc 736
>dbj|AK105936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B07, full insert sequence Length = 1240 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 371 ||||||||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 776 aacatctcccatggaacatcgccaacaagcatccagtctccatccttgtc 727
>dbj|AK102762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D08, full insert sequence Length = 1150 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 371 ||||||||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 756 aacatctcccatggaacatcgccaacaagcatccagtctccatccttgtc 707
>dbj|AK069902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034K17, full insert sequence Length = 1306 Score = 44.1 bits (22), Expect = 0.32 Identities = 43/50 (86%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 371 ||||||||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 842 aacatctcccatggaacatcgccaacaagcatccagtctccatccttgtc 793
>gb|AF169830.1|AF169830 Glycine max auxin-induced protein ali50 mRNA, partial cds Length = 731 Score = 44.1 bits (22), Expect = 0.32 Identities = 34/38 (89%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtc 359 ||||||||||| ||||| || || |||||||||||||| Sbjct: 402 aacatctcccatgggacatcacccacgagcatccagtc 365
>gb|AF123504.1|AF123504 Nicotiana tabacum Nt-iaa2.3 deduced protein mRNA, complete cds Length = 756 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 277 gcttctgatcctttcattatcc 298 |||||||||||||||||||||| Sbjct: 564 gcttctgatcctttcattatcc 543
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12, complete sequence Length = 88725 Score = 44.1 bits (22), Expect = 0.32 Identities = 37/42 (88%) Strand = Plus / Minus Query: 337 acgtcgccgacgagcatccagtcgccgtccttgtcctcgtag 378 |||||||||||||||||| |||||| || | |||||||||| Sbjct: 11262 acgtcgccgacgagcatctggtcgccctcgtcgtcctcgtag 11221
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 tcgccgacgagcatccagtcg 360 ||||||||||||||||||||| Sbjct: 1644743 tcgccgacgagcatccagtcg 1644763
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 tcgccgacgagcatccagtcg 360 ||||||||||||||||||||| Sbjct: 2891607 tcgccgacgagcatccagtcg 2891627
>gb|AC092657.2| Homo sapiens BAC clone RP11-468M13 from 7, complete sequence Length = 71202 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 ataataataataggggaaggg 25 ||||||||||||||||||||| Sbjct: 66121 ataataataataggggaaggg 66141
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 tcgccgacgagcatccagtcg 360 ||||||||||||||||||||| Sbjct: 2621699 tcgccgacgagcatccagtcg 2621719
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 ggggacgtcgccgacgagcatccag 357 |||||||||||||| |||||||||| Sbjct: 237305 ggggacgtcgccgaggagcatccag 237281
>gb|AY085353.1| Arabidopsis thaliana clone 147711 mRNA, complete sequence Length = 783 Score = 42.1 bits (21), Expect = 1.3 Identities = 48/57 (84%) Strand = Plus / Minus Query: 321 gaacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 |||||||| ||| || || || ||||||||||||||||| | |||||||| ||||| Sbjct: 581 gaacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 525
>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b, complete sequence Length = 68747 Score = 42.1 bits (21), Expect = 1.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 327 ctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtc 371 ||||||||| || || |||| |||||||||||| || |||||||| Sbjct: 4669 ctcccagggcacatcaccgaggagcatccagtcaccatccttgtc 4713 Score = 40.1 bits (20), Expect = 5.1 Identities = 38/44 (86%) Strand = Plus / Plus Query: 268 agcccgatggcttctgatcctttcattatccggaggcgcttgca 311 ||||| || ||||| || ||||||||||| ||||| |||||||| Sbjct: 4405 agcccaattgcttcagaacctttcattatgcggagacgcttgca 4448
>dbj|AB004931.1| Vigna radiata mRNA for Aux22c, complete cds Length = 899 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctc 374 ||||||||||| || || || || || |||||||||||||| || |||||||| Sbjct: 474 aacatctcccaaggaacatctccaaccagcatccagtcgccatctttgtcctc 422
>ref|NM_104161.2| Arabidopsis thaliana IAA6; transcription factor AT1G52830 (IAA6) mRNA, complete cds Length = 829 Score = 40.1 bits (20), Expect = 5.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||| ||| || || || ||||||||||||||||| | |||||||| ||||| Sbjct: 582 aacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 527
>ref|NM_100305.2| Arabidopsis thaliana SHY2 (SHORT HYPOCOTYL 2); transcription factor AT1G04240 (SHY2) mRNA, complete cds Length = 1042 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 tggcttctgatcctttcattatcc 298 ||||||||||||||||||| |||| Sbjct: 643 tggcttctgatcctttcatgatcc 620
>gb|AC169698.1| Rhesus Macaque BAC CH250-254N3 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 179377 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 gacacagtcataatcttgaa 215 |||||||||||||||||||| Sbjct: 170818 gacacagtcataatcttgaa 170837
>gb|AC161767.4| Pan troglodytes BAC clone CH251-365K8 from chromosome 7, complete sequence Length = 148248 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tatcctctgcttgctaaaggaaaa 49 |||||||| ||||||||||||||| Sbjct: 127236 tatcctctacttgctaaaggaaaa 127213
>gb|AC161127.3| Pan troglodytes BAC clone CH251-452P2 from chromosome 7, complete sequence Length = 205655 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 tatcctctgcttgctaaaggaaaa 49 |||||||| ||||||||||||||| Sbjct: 9913 tatcctctacttgctaaaggaaaa 9890
>gb|AY098938.1| Solanum tuberosum Aux/IAA protein mRNA, complete cds Length = 1589 Score = 40.1 bits (20), Expect = 5.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||||||| || || || ||||| ||||||||||| || ||||| || ||||| Sbjct: 1156 aacatctcccaaggtacatcaccgacaagcatccagtccccatccttatcttcgta 1101
>gb|AC092098.3| Homo sapiens BAC clone RP11-533K11 from 7, complete sequence Length = 198786 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tatacatactacatattata 108 |||||||||||||||||||| Sbjct: 127104 tatacatactacatattata 127085
>emb|AL353742.23| Human DNA sequence from clone RP11-505C13 on chromosome 9q31.1-32 Contains part of a novel gene, complete sequence Length = 157657 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 atgacaacaagatggaatagaaga 145 ||||||||||||||||||| |||| Sbjct: 44677 atgacaacaagatggaataaaaga 44654
>ref|XM_777892.1| PREDICTED: Strongylocentrotus purpuratus similar to forkhead box P1 (LOC577677), mRNA Length = 4326 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gctcctgctcttgcatttct 250 |||||||||||||||||||| Sbjct: 289 gctcctgctcttgcatttct 270
>gb|AY064007.1| Arabidopsis thaliana putative auxin-induced protein IAA3 (At1g04240) mRNA, complete cds Length = 1003 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 tggcttctgatcctttcattatcc 298 ||||||||||||||||||| |||| Sbjct: 643 tggcttctgatcctttcatgatcc 620
>gb|AC023844.6| Homo sapiens chromosome 15, clone RP11-427O16, complete sequence Length = 188788 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaggaaaatactattgatt 60 |||||||||||||||||||| Sbjct: 89461 aaaggaaaatactattgatt 89442
>gb|AC113580.3| Tetraodon nigroviridis clone GSTNA-28E1, complete sequence Length = 127223 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaggaaaatactattgatt 60 |||||||||||||||||||| Sbjct: 40683 aaaggaaaatactattgatt 40664
>gb|AF332393.1| Arabidopsis thaliana clone C00011 (f) auxin-induced protein IAA3 (At1g04240) mRNA, complete cds Length = 570 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 tggcttctgatcctttcattatcc 298 ||||||||||||||||||| |||| Sbjct: 547 tggcttctgatcctttcatgatcc 524
>gb|AF336915.1| Arabidopsis thaliana clone C00013 (h) IAA6 (At1g52830) mRNA, complete cds Length = 570 Score = 40.1 bits (20), Expect = 5.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||| ||| || || || ||||||||||||||||| | |||||||| ||||| Sbjct: 497 aacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 442
>gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, complete sequence Length = 211945 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 tagcagtactagtaatatta 172 |||||||||||||||||||| Sbjct: 2514 tagcagtactagtaatatta 2533
>gb|AC021677.4|AC021677 Homo sapiens chromosome 15, clone RP11-62D2, complete sequence Length = 177762 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 aaaggaaaatactattgatt 60 |||||||||||||||||||| Sbjct: 77195 aaaggaaaatactattgatt 77176
>ref|XM_623505.1| PREDICTED: Apis mellifera similar to kinesin-like boursin (LOC551109), mRNA Length = 2199 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 taaaggaaaatactattgat 59 |||||||||||||||||||| Sbjct: 710 taaaggaaaatactattgat 729
>emb|BX817970.1|CNS0AE4C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL54ZB06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 742 Score = 40.1 bits (20), Expect = 5.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||| ||| || || || ||||||||||||||||| | |||||||| ||||| Sbjct: 569 aacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 514
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 349 agcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||||| || |||||||| |||||||| Sbjct: 145851 agcatccagtcaccatccttgtcttcgtaggt 145820
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431F01 Length = 143209 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 349 agcatccagtcgccgtccttgtcctcgtaggt 380 ||||||||||| || |||||||| |||||||| Sbjct: 52633 agcatccagtcaccatccttgtcttcgtaggt 52602
>dbj|AK110177.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-G12, full insert sequence Length = 3556 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gccgtccttgtcctcgtagg 379 |||||||||||||||||||| Sbjct: 903 gccgtccttgtcctcgtagg 884
>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full insert sequence Length = 430 Score = 40.1 bits (20), Expect = 5.1 Identities = 104/132 (78%) Strand = Plus / Minus Query: 228 tcagctcctgctcttgcatttctccattgcccttggcgcgagcccgatggcttctgatcc 287 ||||||| || ||||| | || ||| |||| ||||| || || || |||||||| || || Sbjct: 136 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 77 Query: 288 tttcattatccggaggcgcttgcacgacgcgacgaacatctcccaggggacgtcgccgac 347 ||||| |||| | ||| ||||| ||| |||| ||||||| ||| ||||| || || || Sbjct: 76 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggacatctccaac 17 Query: 348 gagcatccagtc 359 ||||||||||| Sbjct: 16 aagcatccagtc 5
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 tcgccgacgagcatccagtc 359 |||||||||||||||||||| Sbjct: 2267702 tcgccgacgagcatccagtc 2267683
>gb|U18408.1|ATU18408 Arabidopsis thaliana IAA6 (IAA6) gene, complete cds Length = 764 Score = 40.1 bits (20), Expect = 5.1 Identities = 47/56 (83%) Strand = Plus / Minus Query: 322 aacatctcccaggggacgtcgccgacgagcatccagtcgccgtccttgtcctcgta 377 ||||||| ||| || || || ||||||||||||||||| | |||||||| ||||| Sbjct: 517 aacatctgccaaggtacatctccgacgagcatccagtctctatccttgtcttcgta 462
>gb|U18406.1|ATU18406 Arabidopsis thaliana IAA3 (IAA3) gene, complete cds Length = 1031 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 275 tggcttctgatcctttcattatcc 298 ||||||||||||||||||| |||| Sbjct: 632 tggcttctgatcctttcatgatcc 609
>emb|AL844850.9| Mouse DNA sequence from clone RP23-255B16 on chromosome 2, complete sequence Length = 179361 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 acagagttgggcaagcatag 196 |||||||||||||||||||| Sbjct: 82105 acagagttgggcaagcatag 82124
>gb|DQ243481.1| Bombyx mori chromosome 24 microsatellite S2418-R sequence Length = 274 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 tatacatactacatattata 108 |||||||||||||||||||| Sbjct: 193 tatacatactacatattata 212 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,526,091 Number of Sequences: 3902068 Number of extensions: 4526091 Number of successful extensions: 67635 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 173 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 66870 Number of HSP's gapped (non-prelim): 753 length of query: 380 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 358 effective length of database: 17,147,199,772 effective search space: 6138697518376 effective search space used: 6138697518376 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
