>ref|XM_473024.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1146

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 347  ctcgaaggcggcgacggccatgatccagacggcg 380
            |||||| ||||||||||| |||| ||||||||||
Sbjct: 1116 ctcgaacgcggcgacggcgatgacccagacggcg 1083

>emb|AL512444.20| Human DNA sequence from clone RP11-69E9 on chromosome 1 Contains part
            of the EPHB2 gene for EphB2 and a novel gene, complete
            sequence
          Length = 126589

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 293  ggatgatgggtgacggatgggt 314
            ||||||||||||||||||||||
Sbjct: 3377 ggatgatgggtgacggatgggt 3398

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                  
Query: 347      ctcgaaggcggcgacggccatgatccagacggcg 380
                |||||| ||||||||||| |||| ||||||||||
Sbjct: 24744066 ctcgaacgcggcgacggcgatgacccagacggcg 24744033

>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11,
              complete sequence
          Length = 133856

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 347    ctcgaaggcggcgacggccatgatccagacggcg 380
              |||||| ||||||||||| |||| ||||||||||
Sbjct: 133589 ctcgaacgcggcgacggcgatgacccagacggcg 133556

>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
            complete sequence
          Length = 170765

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 347  ctcgaaggcggcgacggccatgatccagacggcg 380
            |||||| ||||||||||| |||| ||||||||||
Sbjct: 5782 ctcgaacgcggcgacggcgatgacccagacggcg 5749

>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 307     ggatgggtcagtcgtcgtcgt 327
               |||||||||||||||||||||
Sbjct: 1783266 ggatgggtcagtcgtcgtcgt 1783246

>gb|CP000003.1| Streptococcus pyogenes MGAS10394, complete genome
          Length = 1899877

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 307     ggatgggtcagtcgtcgtcgt 327
               |||||||||||||||||||||
Sbjct: 1844103 ggatgggtcagtcgtcgtcgt 1844083

>gb|AE006633.1| Streptococcus pyogenes M1 GAS, section 162 of 167 of the complete
             genome
          Length = 14098

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 307   ggatgggtcagtcgtcgtcgt 327
             |||||||||||||||||||||
Sbjct: 13834 ggatgggtcagtcgtcgtcgt 13814

>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 307     ggatgggtcagtcgtcgtcgt 327
               |||||||||||||||||||||
Sbjct: 1886928 ggatgggtcagtcgtcgtcgt 1886908

>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 307     ggatgggtcagtcgtcgtcgt 327
               |||||||||||||||||||||
Sbjct: 1806475 ggatgggtcagtcgtcgtcgt 1806455

>gb|CP000260.1| Streptococcus pyogenes MGAS10270, complete genome
          Length = 1928252

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 307     ggatgggtcagtcgtcgtcgt 327
               |||||||||||||||||||||
Sbjct: 1858861 ggatgggtcagtcgtcgtcgt 1858841

>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 307     ggatgggtcagtcgtcgtcgt 327
               |||||||||||||||||||||
Sbjct: 1782598 ggatgggtcagtcgtcgtcgt 1782578

>ref|XM_797057.1| Trypanosoma cruzi strain CL Brener dynein heavy chain
           (Tc00.1047053405179.10) partial mRNA
          Length = 1062

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 158 tcctcaaatttcgccatccgcccaa 182
           ||||||||||||| |||||||||||
Sbjct: 451 tcctcaaatttcgtcatccgcccaa 427

>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 307     ggatgggtcagtcgtcgtcgt 327
               |||||||||||||||||||||
Sbjct: 1831810 ggatgggtcagtcgtcgtcgt 1831790

>ref|XM_500347.1| Yarrowia lipolytica CLIB122, YALI0B00528g predicted mRNA
          Length = 2781

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 316 agtcgtcgtcgtcctcgtagt 336
           |||||||||||||||||||||
Sbjct: 55  agtcgtcgtcgtcctcgtagt 35

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 354     gcggcgacggccatgatccag 374
               |||||||||||||||||||||
Sbjct: 3267114 gcggcgacggccatgatccag 3267094

>gb|AE010120.1| Streptococcus pyogenes strain MGAS8232, section 168 of 173 of the
            complete genome
          Length = 10029

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 307  ggatgggtcagtcgtcgtcgt 327
            |||||||||||||||||||||
Sbjct: 4839 ggatgggtcagtcgtcgtcgt 4819

>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 307     ggatgggtcagtcgtcgtcgt 327
               |||||||||||||||||||||
Sbjct: 1846421 ggatgggtcagtcgtcgtcgt 1846401

>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 307     ggatgggtcagtcgtcgtcgt 327
               |||||||||||||||||||||
Sbjct: 1840206 ggatgggtcagtcgtcgtcgt 1840186

>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia
             lipolytica
          Length = 3066374

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 316   agtcgtcgtcgtcctcgtagt 336
             |||||||||||||||||||||
Sbjct: 48458 agtcgtcgtcgtcctcgtagt 48478

>gb|AC167814.4| Mus musculus BAC clone RP24-248O12 from chromosome 17, complete sequence
          Length = 177174

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    gatagctgctccagattaat 244
              ||||||||||||||||||||
Sbjct: 132447 gatagctgctccagattaat 132466

>gb|AC005217.1| Homo sapiens chromosome 5, P1 clone 1047D6 (LBNL H20), complete
             sequence
          Length = 85641

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   atcctcaaatttcgccatcc 176
             ||||||||||||||||||||
Sbjct: 28698 atcctcaaatttcgccatcc 28679

>gb|AC024753.1| Caenorhabditis elegans cosmid Y23H5B, complete sequence
          Length = 69663

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    aatgtacaaatatgaatcag 72
             ||||||||||||||||||||
Sbjct: 45325 aatgtacaaatatgaatcag 45306

>gb|AC101969.6| Mus musculus chromosome 17, clone RP24-259G8, complete sequence
          Length = 219711

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    gatagctgctccagattaat 244
              ||||||||||||||||||||
Sbjct: 138650 gatagctgctccagattaat 138631

>gb|AC159021.2| Pan troglodytes BAC clone CH251-508C8 from chromosome unknown, complete
             sequence
          Length = 240827

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   atcctcaaatttcgccatcc 176
             ||||||||||||||||||||
Sbjct: 22501 atcctcaaatttcgccatcc 22482

>gb|AC034228.6| Homo sapiens chromosome 5 clone CTD-2198K16, complete sequence
          Length = 183378

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    atcctcaaatttcgccatcc 176
              ||||||||||||||||||||
Sbjct: 129211 atcctcaaatttcgccatcc 129230

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 266      cttcatggacggacgcgacg 285
                ||||||||||||||||||||
Sbjct: 16302395 cttcatggacggacgcgacg 16302376

>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1344_B01
          Length = 170912

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    cttcatggacggacgcgacg 285
              ||||||||||||||||||||
Sbjct: 118911 cttcatggacggacgcgacg 118892

>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 329     ctcgtagtagcgcttgaactcgaa 352
               |||||||||||||||| |||||||
Sbjct: 3081722 ctcgtagtagcgcttgtactcgaa 3081745

>emb|CT027993.6| Mouse DNA sequence from clone RP24-82E21 on chromosome 17, complete
              sequence
          Length = 241014

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    gatagctgctccagattaat 244
              ||||||||||||||||||||
Sbjct: 238581 gatagctgctccagattaat 238562

>gb|AC171209.1| Mus musculus BAC clone RP23-105E1 from chromosome 17, complete sequence
          Length = 212184

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 225    gatagctgctccagattaat 244
              ||||||||||||||||||||
Sbjct: 176100 gatagctgctccagattaat 176081


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,414,509
Number of Sequences: 3902068
Number of extensions: 2414509
Number of successful extensions: 45453
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45225
Number of HSP's gapped (non-prelim): 228
length of query: 380
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 358
effective length of database: 17,147,199,772
effective search space: 6138697518376
effective search space used: 6138697518376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)