>gb|BT009058.1| Triticum aestivum clone wdr1f.pk003.b21:fis, full insert mRNA
           sequence
          Length = 1157

 Score =  361 bits (182), Expect = 1e-96
 Identities = 212/222 (95%)
 Strand = Plus / Minus

                                                                       
Query: 238 ggctcactgccgcattcagggagatttcttgctctcctgcaggcgctcgaacaggctgcc 297
           ||||||||||| |||||||| |||||||||||| |||||||| |||||||||||||||||
Sbjct: 887 ggctcactgccacattcaggtagatttcttgctttcctgcagacgctcgaacaggctgcc 828

                                                                       
Query: 298 atcgaaggcgcccctcacgatttctcgctgcaaaaggccttctttatcctttgccacctt 357
           |||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 827 atcgaaggcgccccgcacgatttctcgctgcaaaaagccttcgttatcctttgccacctt 768

                                                                       
Query: 358 gtgcagcaacttccattcgaggttggctgcggcccagcccaggaaatcatacatattacg 417
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 767 gtgcagcaacttccattcgaggttggccgcggcccagcccaggaaatcatacatattgcg 708

                                                     
Query: 418 gttgtgtttaagcatggcgttaatctcatcttctgacaaagc 459
           ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 707 gttgtatttaagcatggcgttaatctcatcttctgacaaagc 666



 Score =  178 bits (90), Expect = 1e-41
 Identities = 182/209 (87%), Gaps = 9/209 (4%)
 Strand = Plus / Minus

                                                                        
Query: 1    atgcgaggtactgatgattcaagagtgcacattaccaagtacc-ctgtacaccttctatg 59
            |||||||||| |||||||||| ||||||||||||| |||| || ||||||||||||| ||
Sbjct: 1106 atgcgaggtaatgatgattcacgagtgcacattac-aagttccactgtacaccttctgtg 1048

                                                                        
Query: 60   tgctaccaataacagtacaaattccagttccaaatatgaagacagatgaaaatgtttagg 119
             ||||||||||| | ||||||||||||||| |||||  ||  || |||||||||||||||
Sbjct: 1047 cgctaccaataaaaatacaaattccagttcaaaataacaatgcaaatgaaaatgtttagg 988

                                                                        
Query: 120  ccgccgtaaacgggccgagcacttcttattcgacgtacacacaactcaaacta-----ca 174
            |||||| | ||||||| | ||||||||||| |||||  |||||||||||||||     ||
Sbjct: 987  ccgccgcagacgggccaaacacttcttatttgacgt--acacaactcaaactacaatgca 930

                                         
Query: 175  gggaggcttttcaaatttcaagtgcagat 203
            |||||||||||||||||||||||||||||
Sbjct: 929  gggaggcttttcaaatttcaagtgcagat 901

>ref|NM_187692.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 816

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                       
Query: 259 agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 318
           |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 810 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 751

                                               
Query: 319 ttctcgctgcaaaaggccttctttatcctttgccac 354
           |||||| ||||| || |||||||||||||| |||||
Sbjct: 750 ttctcgttgcaacagcccttctttatccttggccac 715

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                           
Query: 259     agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 318
               |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 6388675 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 6388616

                                                   
Query: 319     ttctcgctgcaaaaggccttctttatcctttgccac 354
               |||||| ||||| || |||||||||||||| |||||
Sbjct: 6388615 ttctcgttgcaacagcccttctttatccttggccac 6388580

>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                         
Query: 259   agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 318
             |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 68801 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 68742

                                                 
Query: 319   ttctcgctgcaaaaggccttctttatcctttgccac 354
             |||||| ||||| || |||||||||||||| |||||
Sbjct: 68741 ttctcgttgcaacagcccttctttatccttggccac 68706

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 84/96 (87%)
 Strand = Plus / Minus

                                                                           
Query: 259     agatttcttgctctcctgcaggcgctcgaacaggctgccatcgaaggcgcccctcacgat 318
               |||||||||||| ||||| || ||||| ||||||||||||||||||||||| || ||  |
Sbjct: 6387888 agatttcttgctgtcctgaagtcgctcaaacaggctgccatcgaaggcgcctctaacagt 6387829

                                                   
Query: 319     ttctcgctgcaaaaggccttctttatcctttgccac 354
               |||||| ||||| || |||||||||||||| |||||
Sbjct: 6387828 ttctcgttgcaacagcccttctttatccttggccac 6387793

>gb|AY104352.1| Zea mays PCO064372 mRNA sequence
          Length = 912

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 317 atttctcgctgcaaaaggccttctttatcctttgccac 354
           |||||||||||||| ||||| ||||| |||||||||||
Sbjct: 889 atttctcgctgcaacaggccatctttgtcctttgccac 852

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 221     cggtctcgactgcgcgcggct 241
               |||||||||||||||||||||
Sbjct: 1408707 cggtctcgactgcgcgcggct 1408727

>gb|AC068647.10| Homo sapiens 3 BAC RP11-64D22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132745

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 67    aataacagtacaaattccagt 87
             |||||||||||||||||||||
Sbjct: 39392 aataacagtacaaattccagt 39372

>gb|AC125629.1| Homo sapiens 12 BAC RP11-359K6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 139793

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 91    aaatatgaagacagatgaaaa 111
             |||||||||||||||||||||
Sbjct: 89770 aaatatgaagacagatgaaaa 89750

>gb|AE004593.1| Pseudomonas aeruginosa PAO1, section 154 of 529 of the complete genome
          Length = 11002

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 277   caggcgctcgaacaggctgcc 297
             |||||||||||||||||||||
Sbjct: 10325 caggcgctcgaacaggctgcc 10305

>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 273     cctgcaggcgctcgaacagg 292
               ||||||||||||||||||||
Sbjct: 2927541 cctgcaggcgctcgaacagg 2927522

>ref|XM_855376.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 7
           (LOC490971), mRNA
          Length = 2595

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 gttaatctcatcttctgaca 455
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_855343.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 6
           (LOC490971), mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 gttaatctcatcttctgaca 455
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_855308.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 5
           (LOC490971), mRNA
          Length = 2604

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 gttaatctcatcttctgaca 455
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_844885.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 2
           (LOC490971), mRNA
          Length = 2579

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 gttaatctcatcttctgaca 455
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_855210.1| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 3
           (LOC490971), mRNA
          Length = 1186

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 gttaatctcatcttctgaca 455
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_548094.2| PREDICTED: Canis familiaris similar to GCN5 general control of
           amino-acid synthesis 5-like 2, transcript variant 1
           (LOC490971), mRNA
          Length = 2613

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 436 gttaatctcatcttctgaca 455
           ||||||||||||||||||||
Sbjct: 554 gttaatctcatcttctgaca 535

>ref|XM_651817.1| Entamoeba histolytica HM-1:IMSS polysaccharide deacetylase,
           putative (6.t00029) partial mRNA
          Length = 828

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 398 aggaaatcatacatattacg 417
           ||||||||||||||||||||
Sbjct: 324 aggaaatcatacatattacg 343

>gb|AC138453.8| Medicago truncatula clone mth2-20m14, complete sequence
          Length = 144639

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    gacagatgaaaatgtttagg 119
              ||||||||||||||||||||
Sbjct: 104112 gacagatgaaaatgtttagg 104131

>emb|AL512844.5| Human DNA sequence from clone RP11-90H3 on chromosome 1 Contains two
             matrin 3 (MATR3) pseudogenes, complete sequence
          Length = 159017

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   ggcccagcccaggaaatcat 407
             ||||||||||||||||||||
Sbjct: 21244 ggcccagcccaggaaatcat 21225

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 273     cctgcaggcgctcgaacagg 292
               ||||||||||||||||||||
Sbjct: 1106069 cctgcaggcgctcgaacagg 1106050

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 266     ttgctctcctgcaggcgctc 285
               ||||||||||||||||||||
Sbjct: 3043211 ttgctctcctgcaggcgctc 3043230

>gb|AC008360.3|AC008360 Drosophila melanogaster, chromosome 3R, region 87E-87F, BAC clone
             BACR06H18, complete sequence
          Length = 194672

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    agacagatgaaaatgtttag 118
             ||||||||||||||||||||
Sbjct: 95653 agacagatgaaaatgtttag 95634

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    cctgcaggcgctcgaacagg 292
              ||||||||||||||||||||
Sbjct: 700710 cctgcaggcgctcgaacagg 700691

>gb|AC010789.9|AC010789 Homo sapiens chromosome 10, clone RP11-190J1, complete sequence
          Length = 203842

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    ctatgtgctaccaataacag 74
             ||||||||||||||||||||
Sbjct: 28409 ctatgtgctaccaataacag 28390

>gb|AF274572.4| Homo sapiens chromosome X clone RP4-741O10 map q28, complete sequence
          Length = 126522

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   ggcccagcccaggaaatcat 407
             ||||||||||||||||||||
Sbjct: 42234 ggcccagcccaggaaatcat 42253

>gb|AC111094.12| Mus musculus chromosome 3, clone RP23-171O7, complete sequence
          Length = 187464

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 189    atttcaagtgcagatgtttcataa 212
              ||||||||||||||||||| ||||
Sbjct: 105343 atttcaagtgcagatgtttgataa 105366

>emb|BX572629.8| Zebrafish DNA sequence from clone CH211-195L15 in linkage group 19,
              complete sequence
          Length = 170971

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     aagacagatgaaaatgttta 117
              ||||||||||||||||||||
Sbjct: 165213 aagacagatgaaaatgttta 165194

>gb|AE003700.3| Drosophila melanogaster chromosome 3R, section 38 of 118 of the
             complete sequence
          Length = 228324

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    agacagatgaaaatgtttag 118
             ||||||||||||||||||||
Sbjct: 22154 agacagatgaaaatgtttag 22135

>emb|CT009557.4| Pan troglodytes chromosome X clone PTB-010G23 map Xq28, complete sequence
          Length = 244504

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    ggcccagcccaggaaatcat 407
              ||||||||||||||||||||
Sbjct: 168335 ggcccagcccaggaaatcat 168316

>gb|AC003923.1|AC003923 Drosophila melanogaster (P1 DS04219 (D36)) DNA sequence, complete
             sequence
          Length = 82393

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    agacagatgaaaatgtttag 118
             ||||||||||||||||||||
Sbjct: 52874 agacagatgaaaatgtttag 52893

>emb|AL627425.15| Mouse DNA sequence from clone RP23-283L16 on chromosome 4, complete
              sequence
          Length = 226967

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 91     aaatatgaagacagatgaaa 110
              ||||||||||||||||||||
Sbjct: 211326 aaatatgaagacagatgaaa 211345


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,312,289
Number of Sequences: 3902068
Number of extensions: 4312289
Number of successful extensions: 77789
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77604
Number of HSP's gapped (non-prelim): 182
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)