ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart18f10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 404 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/67 (89%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 122 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 180 |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 226 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 170 Query: 181 aaaaatt 187 ||||||| Sbjct: 169 aaaaatt 163
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/67 (89%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 122 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 180 |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 26356294 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 26356238 Query: 181 aaaaatt 187 ||||||| Sbjct: 26356237 aaaaatt 26356231 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 285 gcgctcgccaaggccaccagcgccgcgacgccggccgcgcgcgc 328 |||| |||||| ||||| ||||| |||||||||||||||||||| Sbjct: 26356065 gcgcccgccaatgccacgagcgcggcgacgccggccgcgcgcgc 26356022
>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:P0491E01 Length = 136150 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/67 (89%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 122 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 180 |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 88646 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 88590 Query: 181 aaaaatt 187 ||||||| Sbjct: 88589 aaaaatt 88583 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 285 gcgctcgccaaggccaccagcgccgcgacgccggccgcgcgcgc 328 |||| |||||| ||||| ||||| |||||||||||||||||||| Sbjct: 88417 gcgcccgccaatgccacgagcgcggcgacgccggccgcgcgcgc 88374
>dbj|AK062922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-H08, full insert sequence Length = 404 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/67 (89%), Gaps = 4/67 (5%) Strand = Plus / Minus Query: 122 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 180 |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 226 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 170 Query: 181 aaaaatt 187 ||||||| Sbjct: 169 aaaaatt 163
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 65.9 bits (33), Expect = 1e-07 Identities = 82/94 (87%), Gaps = 7/94 (7%) Strand = Plus / Minus Query: 122 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 180 |||| ||||||||||||||| ||||||||||||||||||||||| | |||||||||| Sbjct: 79437 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 79381 Query: 181 aaaaatt-aaatgacgacacgaaagaagaaaaaa 213 ||||||| |||| | ||||||||||| |||||| Sbjct: 79380 aaaaatttaaataa--acacgaaagaaaaaaaaa 79349 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 285 gcgctcgccaaggccaccagcgccgcgacgccggccgcgcgcgc 328 |||| |||||| ||||| ||||| |||||||||||||||||||| Sbjct: 79209 gcgcccgccaatgccacgagcgcggcgacgccggccgcgcgcgc 79166
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 303 agcgccgcgacgccggccgcgc 324 |||||||||||||||||||||| Sbjct: 1929641 agcgccgcgacgccggccgcgc 1929662 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 ccagcgccgcgacgccggccgcgc 324 ||||| |||||||||||||||||| Sbjct: 65744 ccagccccgcgacgccggccgcgc 65721
>gb|AC127300.3| Mus musculus BAC clone RP23-264J18 from chromosome 8, complete sequence Length = 178649 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 200 gaaagaagaaaaaagcagcagc 221 |||||||||||||||||||||| Sbjct: 126134 gaaagaagaaaaaagcagcagc 126113
>dbj|AK086041.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830048B13 product:hypothetical protein, full insert sequence Length = 3256 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 200 gaaagaagaaaaaagcagcagc 221 |||||||||||||||||||||| Sbjct: 1597 gaaagaagaaaaaagcagcagc 1576
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 378 acgggggatgtggacggggatg 399 |||||||||||||||||||||| Sbjct: 2165104 acgggggatgtggacggggatg 2165125
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 296 ggccaccagcgccgcgacgccggcc 320 ||||| ||||||||||||||||||| Sbjct: 4646203 ggccagcagcgccgcgacgccggcc 4646179
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 cagcgccgcgacgccggccgcgcgc 326 |||||||||||||||||| |||||| Sbjct: 4793254 cagcgccgcgacgccggcggcgcgc 4793278
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 302 cagcgccgcgacgccggccgcgcgc 326 |||||||||||||||||| |||||| Sbjct: 335414 cagcgccgcgacgccggcggcgcgc 335390
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 302 cagcgccgcgacgccggccgcgcgc 326 |||||||||||||||||| |||||| Sbjct: 5066281 cagcgccgcgacgccggcggcgcgc 5066305
>gb|AY938407.1| Uncultured eukaryote clone ENI47296.00339 18S ribosomal RNA gene, partial sequence Length = 576 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY938380.1| Uncultured eukaryote clone ENI47296.00298 18S ribosomal RNA gene, partial sequence Length = 235 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 43 aaaccaaccactacccgccga 23
>gb|AY938362.1| Uncultured eukaryote clone ENI47296.00256 18S ribosomal RNA gene, partial sequence Length = 589 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY938336.1| Uncultured eukaryote clone ENI47296.00208 18S ribosomal RNA gene, partial sequence Length = 570 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 46 aaaccaaccactacccgccga 26
>gb|AY938304.1| Uncultured eukaryote clone ENI47296.00151 18S ribosomal RNA gene, partial sequence Length = 589 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY938212.1| Uncultured eukaryote clone ENI42482.00364 18S ribosomal RNA gene, partial sequence Length = 573 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY938060.1| Uncultured eukaryote clone ENI42482.00172 18S ribosomal RNA gene, partial sequence Length = 545 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY937894.1| Uncultured eukaryote clone ENI40076.00794 18S ribosomal RNA gene, partial sequence Length = 607 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 49 aaaccaaccactacccgccga 29
>gb|AY937836.1| Uncultured eukaryote clone ENI40076.00722 18S ribosomal RNA gene, partial sequence Length = 605 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 45 aaaccaaccactacccgccga 25
>gb|AY937612.1| Uncultured eukaryote clone ENI40076.00315 18S ribosomal RNA gene, partial sequence Length = 568 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 47 aaaccaaccactacccgccga 27
>gb|AY937581.1| Uncultured eukaryote clone ENI40076.00252 18S ribosomal RNA gene, partial sequence Length = 491 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aaaccaaccactacccgccga 99 ||||||||||||||||||||| Sbjct: 44 aaaccaaccactacccgccga 24
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 308 cgcgacgccggccgcgcgcgc 328 ||||||||||||||||||||| Sbjct: 1545329 cgcgacgccggccgcgcgcgc 1545309 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ccgcgacgccggccgcgcgc 326 |||||||||||||||||||| Sbjct: 994651 ccgcgacgccggccgcgcgc 994632
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 302 cagcgccgcgacgccggccgc 322 ||||||||||||||||||||| Sbjct: 2207300 cagcgccgcgacgccggccgc 2207280
>dbj|AP004975.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT21J12, TM0158, complete sequence Length = 83377 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cagaacatgcactaaaccaac 86 ||||||||||||||||||||| Sbjct: 13126 cagaacatgcactaaaccaac 13146
>emb|AL772385.8| Mouse DNA sequence from clone RP23-340E12 on chromosome 4, complete sequence Length = 220248 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 gaaagaagaaaaaagcagcag 220 ||||||||||||||||||||| Sbjct: 115552 gaaagaagaaaaaagcagcag 115532
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cgccaaggccaccagcgccg 309 |||||||||||||||||||| Sbjct: 3180066 cgccaaggccaccagcgccg 3180085
>ref|XM_511282.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC29671 (LOC454445), mRNA Length = 1965 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 ggaggacacagcatgcactggcct 257 ||||||| |||||||||||||||| Sbjct: 1087 ggaggacccagcatgcactggcct 1110
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ccgcgacgccggccgcgcgc 326 |||||||||||||||||||| Sbjct: 3588260 ccgcgacgccggccgcgcgc 3588279
>ref|NM_133611.1| Rattus norvegicus solute carrier family 2 (facilitated glucose transporter), member 13 (Slc2a13), mRNA Length = 2504 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 ccagcgccgcgacgccggccgcgc 324 |||||||||||||| ||||||||| Sbjct: 463 ccagcgccgcgacggcggccgcgc 440
>ref|NM_012897.1| Rattus norvegicus adrenergic receptor kinase, beta 2 (Adrbk2), mRNA Length = 2464 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gcgacgccggccgcgcgcgc 328 |||||||||||||||||||| Sbjct: 67 gcgacgccggccgcgcgcgc 86
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gccggccgcgcgcgctgtgg 333 |||||||||||||||||||| Sbjct: 595250 gccggccgcgcgcgctgtgg 595269
>gb|AC112081.8| Rattus norvegicus 7 BAC CH230-192B8 (Children's Hospital Oakland Research Institute) complete sequence Length = 150311 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 ccagcgccgcgacgccggccgcgc 324 |||||||||||||| ||||||||| Sbjct: 123008 ccagcgccgcgacggcggccgcgc 122985
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gccggccgcgcgcgctgtgg 333 |||||||||||||||||||| Sbjct: 3179554 gccggccgcgcgcgctgtgg 3179535
>gb|AE009333.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 103 of 187 of the complete sequence Length = 13898 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 tgcgctgctgctgtcggtca 354 |||||||||||||||||||| Sbjct: 10910 tgcgctgctgctgtcggtca 10891
>gb|AE008281.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 85 of 187 of the complete sequence Length = 13620 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 tgcgctgctgctgtcggtca 354 |||||||||||||||||||| Sbjct: 4306 tgcgctgctgctgtcggtca 4325
>gb|AC099704.7| Mus musculus chromosome 15, clone RP23-256A2, complete sequence Length = 204704 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 ccagcgccgcgacgccggccgcgc 324 |||||||||||||| ||||||||| Sbjct: 58538 ccagcgccgcgacggcggccgcgc 58561
>gb|AC131773.3| Mus musculus BAC clone RP24-308A19 from chromosome 15, complete sequence Length = 168423 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 ccagcgccgcgacgccggccgcgc 324 |||||||||||||| ||||||||| Sbjct: 80844 ccagcgccgcgacggcggccgcgc 80821
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gccggccgcgcgcgctgtgg 333 |||||||||||||||||||| Sbjct: 3544500 gccggccgcgcgcgctgtgg 3544481
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ggccaccagcgccgcgacgc 315 |||||||||||||||||||| Sbjct: 123689 ggccaccagcgccgcgacgc 123708
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ggccaccagcgccgcgacgc 315 |||||||||||||||||||| Sbjct: 76311 ggccaccagcgccgcgacgc 76330
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ggccaccagcgccgcgacgc 315 |||||||||||||||||||| Sbjct: 342460 ggccaccagcgccgcgacgc 342479
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 cagcgccgcgacgccggccg 321 |||||||||||||||||||| Sbjct: 328224 cagcgccgcgacgccggccg 328205
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gccggccgcgcgcgctgtgg 333 |||||||||||||||||||| Sbjct: 2909434 gccggccgcgcgcgctgtgg 2909415
>emb|AJ276414.1|AAN276414 Artemisia annua partial gASC23 gene for putative sesquiterpene cyclase, exons 1-3 Length = 788 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 catgcactaaaccaaccact 90 |||||||||||||||||||| Sbjct: 380 catgcactaaaccaaccact 399
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gccggccgcgcgcgctgtgg 333 |||||||||||||||||||| Sbjct: 2160155 gccggccgcgcgcgctgtgg 2160136
>ref|NM_001033633.1| Mus musculus solute carrier family 2 (facilitated glucose transporter), member 13 (Slc2a13), mRNA Length = 6535 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 ccagcgccgcgacgccggccgcgc 324 |||||||||||||| ||||||||| Sbjct: 541 ccagcgccgcgacggcggccgcgc 518
>dbj|AK147341.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1016E12 product:Proton myo-inositol transporter homolog [Rattus norvegicus], full insert sequence Length = 6535 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 ccagcgccgcgacgccggccgcgc 324 |||||||||||||| ||||||||| Sbjct: 541 ccagcgccgcgacggcggccgcgc 518
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 cgccgcgacgccggccgcgc 324 |||||||||||||||||||| Sbjct: 1298300 cgccgcgacgccggccgcgc 1298319
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 aggaagacggcgaggcccgc 286 |||||||||||||||||||| Sbjct: 265171 aggaagacggcgaggcccgc 265152
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 296 ggccaccagcgccgcgacgccggc 319 ||||| |||||||||||||||||| Sbjct: 1123115 ggccagcagcgccgcgacgccggc 1123138
>emb|AJ315643.1|RNO315643 Rattus norvegicus mRNA for proton myo-inositol symporter (Hmit gene) Length = 2504 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 ccagcgccgcgacgccggccgcgc 324 |||||||||||||| ||||||||| Sbjct: 463 ccagcgccgcgacggcggccgcgc 440
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 gaagacggcgaggcccgcgc 288 |||||||||||||||||||| Sbjct: 891559 gaagacggcgaggcccgcgc 891540
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 aggaagacggcgaggcccgc 286 |||||||||||||||||||| Sbjct: 1625941 aggaagacggcgaggcccgc 1625960
>gb|M87855.1|RATBARK2 Rattus norvegicus beta-adrenergic receptor kinase 2 (beta-ARK2) mRNA, complete cds Length = 2464 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 gcgacgccggccgcgcgcgc 328 |||||||||||||||||||| Sbjct: 67 gcgacgccggccgcgcgcgc 86 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,462,946 Number of Sequences: 3902068 Number of extensions: 4462946 Number of successful extensions: 91888 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 88913 Number of HSP's gapped (non-prelim): 2965 length of query: 440 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 418 effective length of database: 17,147,199,772 effective search space: 7167529504696 effective search space used: 7167529504696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
