>gb|BT009310.1| Triticum aestivum clone wlm1.pk0022.d1:fis, full insert mRNA sequence
          Length = 1470

 Score =  125 bits (63), Expect = 1e-25
 Identities = 133/155 (85%), Gaps = 6/155 (3%)
 Strand = Plus / Minus

                                                                        
Query: 283  taggtcagcgcgaagtctacgcaccgcttcttccacaccgcgtgcgccggagtaggcgcc 342
            ||||||||||||||||||| ||||||||||||||| |||||||||||||||||    |||
Sbjct: 1263 taggtcagcgcgaagtctatgcaccgcttcttccagaccgcgtgcgccggagt---ggcc 1207

                                                                        
Query: 343  gctacgctggcctccatggttctcttgtttgtcttgg---ccatgccgtagtcctcgtgc 399
            ||| || |||| ||||||| ||||||| |||||||||   |||||| | |||||||||||
Sbjct: 1206 gctgcgttggcgtccatggatctcttgcttgtcttgggcaccatgctgcagtcctcgtgc 1147

                                               
Query: 400  tcatgcgcgtgcctcgccgccggcgcgatgagaag 434
            ||  ||||||| |||| |||||||||  |||||||
Sbjct: 1146 tcgggcgcgtgactcggcgccggcgccgtgagaag 1112

>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             nbeb0015F09b, complete sequence
          Length = 108964

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 411   cctcgccgccggcgcgatgaga 432
             ||||||||||||||||||||||
Sbjct: 15422 cctcgccgccggcgcgatgaga 15443

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 411      cctcgccgccggcgcgatgaga 432
                ||||||||||||||||||||||
Sbjct: 15432076 cctcgccgccggcgcgatgaga 15432097

>gb|AC153497.8| Mus musculus 10 BAC RP23-226H21 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 179741

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 94    atcatgctacatatactacact 115
             ||||||||||||||||||||||
Sbjct: 86471 atcatgctacatatactacact 86492

>gb|AC153825.7| Mus musculus 10 BAC RP23-70B19 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 279677

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 94     atcatgctacatatactacact 115
              ||||||||||||||||||||||
Sbjct: 264400 atcatgctacatatactacact 264421

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 411      cctcgccgccggcgcgatgaga 432
                ||||||||||||||||||||||
Sbjct: 15440317 cctcgccgccggcgcgatgaga 15440338

>gb|AC132336.3| Mus musculus BAC clone RP24-230N9 from chromosome 12, complete sequence
          Length = 149020

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 352   gcctccatggttctcttgttt 372
             |||||||||||||||||||||
Sbjct: 26266 gcctccatggttctcttgttt 26286

>gb|AC155238.2| Mus musculus BAC clone RP24-445E24 from chromosome 12, complete sequence
          Length = 128680

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 352    gcctccatggttctcttgttt 372
              |||||||||||||||||||||
Sbjct: 112235 gcctccatggttctcttgttt 112255

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 406     gcgtgcctcgccgccggcgcg 426
               |||||||||||||||||||||
Sbjct: 2443626 gcgtgcctcgccgccggcgcg 2443606

>emb|CT030196.9| Mouse DNA sequence from clone RP23-282B14 on chromosome 12, complete
             sequence
          Length = 215752

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 352   gcctccatggttctcttgttt 372
             |||||||||||||||||||||
Sbjct: 27704 gcctccatggttctcttgttt 27684

>gb|AC168061.3| Mus musculus BAC clone RP23-199J14 from chromosome 16, complete sequence
          Length = 212340

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     ataatgtttgatgatcagat 70
              ||||||||||||||||||||
Sbjct: 181654 ataatgtttgatgatcagat 181673

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   gcgtgcctcgccgccggcgc 425
             ||||||||||||||||||||
Sbjct: 90042 gcgtgcctcgccgccggcgc 90023

>gb|AC116527.18| Mus musculus chromosome 16, clone RP24-354B8, complete sequence
          Length = 165306

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     ataatgtttgatgatcagat 70
              ||||||||||||||||||||
Sbjct: 102289 ataatgtttgatgatcagat 102270

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    cgcgtgcctcgccgccggcg 424
              ||||||||||||||||||||
Sbjct: 747128 cgcgtgcctcgccgccggcg 747147

>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete
             sequence
          Length = 208710

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   atggttctcttgtttgtctt 377
             ||||||||||||||||||||
Sbjct: 21337 atggttctcttgtttgtctt 21318

>gb|AC131759.3| Mus musculus BAC clone RP24-212D8 from chromosome 12, complete sequence
          Length = 166128

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   atggttctcttgtttgtctt 377
             ||||||||||||||||||||
Sbjct: 24594 atggttctcttgtttgtctt 24613

>gb|AC129213.4| Mus musculus BAC clone RP24-391M2 from chromosome 6, complete sequence
          Length = 154613

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   gttctcttgtttgtcttggc 380
             ||||||||||||||||||||
Sbjct: 88705 gttctcttgtttgtcttggc 88724

>gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-132J21, complete
              sequence
          Length = 200910

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    gttctcttgtttgtcttggc 380
              ||||||||||||||||||||
Sbjct: 178270 gttctcttgtttgtcttggc 178289

>gb|AC160958.2| Mus musculus BAC clone RP24-224I13 from chromosome 13, complete sequence
          Length = 178784

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 164    ccagttcatcttttgagccc 183
              ||||||||||||||||||||
Sbjct: 142848 ccagttcatcttttgagccc 142829

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 393     ctcgtgctcatgcgcgtgcc 412
               ||||||||||||||||||||
Sbjct: 1463067 ctcgtgctcatgcgcgtgcc 1463048

>ref|XM_796893.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein kinase
           C, iota type (nPKC-iota) (Atypical protein kinase
           C-lambda/iota) (aPKC-lambda/iota), transcript variant 2
           (LOC581257), mRNA
          Length = 1600

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 303 gcaccgcttcttccacaccg 322
           ||||||||||||||||||||
Sbjct: 492 gcaccgcttcttccacaccg 511

>ref|XM_775182.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein kinase C,
            iota type (nPKC-iota) (Atypical protein kinase
            C-lambda/iota) (aPKC-lambda/iota), transcript variant 1
            (LOC581257), mRNA
          Length = 2131

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 303  gcaccgcttcttccacaccg 322
            ||||||||||||||||||||
Sbjct: 1023 gcaccgcttcttccacaccg 1042

>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 50      cataatgtttgatgatcaga 69
               ||||||||||||||||||||
Sbjct: 2826991 cataatgtttgatgatcaga 2827010

>emb|CR385022.10| Zebrafish DNA sequence from clone CH211-63C12 in linkage group 23,
              complete sequence
          Length = 163551

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     tttttgtacataatgtttga 61
              ||||||||||||||||||||
Sbjct: 101352 tttttgtacataatgtttga 101333

>emb|BX649301.3| Zebrafish DNA sequence from clone DKEY-208D13 in linkage group 10,
              complete sequence
          Length = 149467

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     tttttgtacataatgtttga 61
              ||||||||||||||||||||
Sbjct: 140531 tttttgtacataatgtttga 140512

>dbj|AK049663.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length
            enriched library, clone:C530018L09 product:nuclear
            receptor-binding SET-domain protein 1, full insert
            sequence
          Length = 2014

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  ccagttcatcttttgagccc 183
            ||||||||||||||||||||
Sbjct: 1757 ccagttcatcttttgagccc 1776

>dbj|AK053386.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130013E01 product:nuclear
            receptor-binding SET-domain protein 1, full insert
            sequence
          Length = 1770

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  ccagttcatcttttgagccc 183
            ||||||||||||||||||||
Sbjct: 1002 ccagttcatcttttgagccc 1021


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,124,641
Number of Sequences: 3902068
Number of extensions: 3124641
Number of successful extensions: 92972
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92711
Number of HSP's gapped (non-prelim): 260
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)