ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart18f08 |
|---|---|
| Clone Library Name | barley_pub |
>ARGC1_PSEPK (Q88QQ6) N-acetyl-gamma-glutamyl-phosphate reductase 1 (EC| 1.2.1.38) (AGPR 1) (N-acetyl-glutamate semialdehyde dehydrogenase 1) (NAGSA dehydrogenase 1) Length = 344 Score = 32.7 bits (73), Expect = 0.21 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = +2 Query: 230 ALIGELPCVLGELLRVCASTGHLHIP---AGLQVHPGHLLGEKLIPNL 364 A +G L C GE ++ A GH H+P GL++ G +G +P+L Sbjct: 188 AAVGSLFCEAGESMKAYAVKGHRHLPEISQGLRLAAGKDIGLTFVPHL 235
>PTPR2_RAT (Q63475) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (PTP NE-6) (PTPNE6) (Phogrin) Length = 1004 Score = 32.3 bits (72), Expect = 0.28 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 6/49 (12%) Frame = +3 Query: 234 SSESCLAYLASSSAFVPPPGT------STFRPVSRSTPDTFSARSSSPI 362 S E+ L Y+A +SA PP T + RP+SR PD S + S I Sbjct: 185 SPENILTYVAHTSALTYPPATRVKYPDNLLRPLSRLQPDELSPKVDSDI 233
>PPDK_TREPA (O83728) Pyruvate, phosphate dikinase (EC 2.7.9.1) (Pyruvate,| orthophosphate dikinase) Length = 901 Score = 31.2 bits (69), Expect = 0.62 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = -3 Query: 346 LAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLS 239 LA K VD + G +E+P +A+E+A+YA+ S Sbjct: 734 LALKAKEVDYKVGAMIELPAAALSADEIARYAQFFS 769
>SYFA_PSEAE (Q9I0A3) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +2 Query: 242 ELPCVL--GELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPNLHQPIQVGLGA 394 ++ CV+ G RVC TG L + VHP L + P Q G+GA Sbjct: 258 DIQCVICSGNGCRVCKQTGWLEVMGCGMVHPNVLRMSNIDPEKFQGFAFGMGA 310
>GPMA_RALEJ (Q476J7) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 248 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = -3 Query: 394 CSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 233 C K + R++ + +E +A D+++G+ V + G + L KY Q+SD+ Sbjct: 151 CLKDTVARVLPLWNESIAP-----DIQSGKRVVIAAHGNSIRALVKYLDQISDD 199
>PTPR2_MOUSE (P80560) Receptor-type tyrosine-protein phosphatase N2 precursor| (EC 3.1.3.48) (R-PTP-N2) (PTP IA-2beta) (Protein tyrosine phosphatase-NP) (PTP-NP) Length = 1001 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 6/49 (12%) Frame = +3 Query: 234 SSESCLAYLASSSAFVPPPGT------STFRPVSRSTPDTFSARSSSPI 362 S E+ L Y+A +SA PP T + RP SR PD S + I Sbjct: 185 SPENILTYVAHTSALTYPPATRAKYPDNLLRPFSRLQPDELSPKVDGDI 233
>GPMA2_LACPL (Q88T35) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| 2 (EC 5.4.2.1) (Phosphoglyceromutase 2) (PGAM 2) (BPG-dependent PGAM 2) (dPGM 2) Length = 230 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/52 (30%), Positives = 28/52 (53%) Frame = -3 Query: 388 KANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 233 K L+R++ ++ +A K L G+NV + G + L+KY Q+SD+ Sbjct: 153 KVTLERVMPFWEDQIAPK-----LLDGKNVIIAAHGNSLRALSKYIEQISDD 199
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/52 (34%), Positives = 30/52 (57%) Frame = +3 Query: 234 SSESCLAYLASSSAFVPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLSKLAL 389 SS S + +SSS+F+ +STF TP + S+ +SS + ++ + LAL Sbjct: 226 SSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSSSSTSSEVPSSTAALAL 277
>SYFA_PSEF5 (Q4KEW0) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Frame = +2 Query: 242 ELPCVL--GELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPNLHQPIQVGLGA 394 ++ CV+ G+ RVC TG L + VHP L + P Q G+GA Sbjct: 258 DMECVMCSGKGCRVCKQTGWLEVMGCGMVHPNVLRMSGIDPEEFQGFAFGMGA 310
>APEA_CLOAB (Q97K30) Probable M18-family aminopeptidase 1 (EC 3.4.11.-)| Length = 465 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/53 (35%), Positives = 29/53 (54%) Frame = -3 Query: 394 CSKANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSD 236 C+ AN + + ++ L E V+ E G+ V+ GGGT A LA+Y Q+ D Sbjct: 381 CNDANPEYIAELRRILSKESVNWQTAELGK-VDQGGGGTIAYILAEYGMQVID 432
>SYFA_PSEPK (Q88K23) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%) Frame = +2 Query: 242 ELPCVL--GELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPNLHQPIQVGLGA 394 ++ CV+ G RVC TG L + VHP L + P Q G+GA Sbjct: 258 DIQCVMCSGNGCRVCKQTGWLEVMGCGMVHPNVLRMSGIDPEEFQGFAFGMGA 310
>THSB_DESMO (Q9V2T3) Thermosome subunit beta (Thermosome subunit 2) (Chaperonin| beta subunit) (Fragment) Length = 502 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -3 Query: 388 KANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLS 239 + L+RLV + + + +S V +PGGG ELAK+ R+L+ Sbjct: 361 RGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLA 410
>FPRP_HUMAN (Q9P2B2) Prostaglandin F2 receptor negative regulator precursor| (Prostaglandin F2-alpha receptor regulatory protein) (Prostaglandin F2-alpha receptor-associated protein) (CD9 partner 1) (CD9P-1) (CD315 antigen) Length = 879 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Frame = -2 Query: 173 LMYVFKLILTFGLGAQSV-----CLI*LCRAYCCCNSLVQES 63 ++ FK L G+G +V CLI C ++ CC VQE+ Sbjct: 825 VLNAFKYPLLIGVGLSTVIGLLSCLIGYCSSHWCCKKEVQET 866
>ARGC_PSEAE (Q9I5Q9) N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)| (AGPR) (N-acetyl-glutamate semialdehyde dehydrogenase) (NAGSA dehydrogenase) Length = 344 Score = 28.9 bits (63), Expect = 3.1 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +2 Query: 230 ALIGELPCVLGELLRVCASTGHLHIP---AGLQVHPGHLLGEKLIPNL 364 A +G L C GE + A GH H+P GL+ G +G +P+L Sbjct: 188 AKVGSLFCEAGESMMAYAVKGHRHLPEISQGLRRASGGDVGLTFVPHL 235
>POLG_EBHSG (Q96725) Genome polyprotein [Contains: p16; p23; Helicase (2C-like| protein) (P2C); 3A-like protein; Viral genome-linked protein (VPg); Thiol protease P3C (EC 3.4.22.-); RNA-directed RNA polymerase (EC 2.7.7.48); Capsid protein VP60, subgenomic Length = 2334 Score = 28.9 bits (63), Expect = 3.1 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +3 Query: 255 YLASSSAFVPPPGTSTFRPVSRSTPDTFSA 344 Y SA V PGT P+ ++TP FSA Sbjct: 2190 YTPQPSAIVTTPGTPVAAPIGKNTPIMFSA 2219
>GPMA2_LACSS (Q38Z74) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| 2 (EC 5.4.2.1) (Phosphoglyceromutase 2) (PGAM 2) (BPG-dependent PGAM 2) (dPGM 2) Length = 229 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = -3 Query: 388 KANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 233 K L+R++ ++ +A K L G+N+ V G + L KY +SDE Sbjct: 153 KVTLERVIPFWEDEIAPK-----LIDGQNIIVAAHGNSLRALTKYIENISDE 199
>SYFA_PSEU2 (Q4ZUG3) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = +2 Query: 242 ELPCVL--GELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPNLHQPIQVGLG 391 ++ CV+ G+ RVC TG L + VHP L + P Q G+G Sbjct: 258 DMECVMCSGKGCRVCKQTGWLEVMGCGMVHPNVLRMSGIDPEEFQGFAFGMG 309
>SYFA_PSESM (Q883H8) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = +2 Query: 242 ELPCVL--GELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPNLHQPIQVGLG 391 ++ CV+ G+ RVC TG L + VHP L + P Q G+G Sbjct: 258 DMECVMCSGKGCRVCKQTGWLEVMGCGMVHPNVLRMSGIDPEEFQGFAFGMG 309
>SYFA_PSE14 (Q48JR9) Phenylalanyl-tRNA synthetase alpha chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase alpha chain) (PheRS) Length = 338 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = +2 Query: 242 ELPCVL--GELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPNLHQPIQVGLG 391 ++ CV+ G+ RVC TG L + VHP L + P Q G+G Sbjct: 258 DMECVMCSGKGCRVCKQTGWLEVMGCGMVHPNVLRMSGIDPEEFQGFAFGMG 309
>GLNE_PHOPR (Q6LUZ6) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 957 Score = 28.1 bits (61), Expect = 5.3 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +2 Query: 218 TASAALIGELPCVLGELLRVCAST 289 T L+GE P LG+L+R+CA++ Sbjct: 547 TTYLELLGEHPAALGQLIRLCAAS 570
>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor| (Mu-protocadherin) Length = 845 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = +3 Query: 270 SAFVPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLSKLAL 389 +A P PGTS P+S+STP + S F+ + AL Sbjct: 632 TAQTPEPGTSQPMPLSKSTPSSGGGPSEDKRFSVVDMAAL 671
>SPTCB_DROME (Q00963) Spectrin beta chain| Length = 2291 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/68 (26%), Positives = 27/68 (39%) Frame = -3 Query: 379 LDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDEXXXXXXX*CAS 200 L + K+G EL+ E G D R E+ + +L KY RQ + + Sbjct: 691 LQNVAKVGSELITEGHFGADRIKDRLKEILNKWDHLLDLTKYRRQRLENAVEYFQLFADA 750 Query: 199 NQTSNCML 176 + N ML Sbjct: 751 DDVDNWML 758
>CCA_LACJO (Q74JK7) CCA-adding enzyme (EC 2.7.7.25) (EC 2.7.7.21) (tRNA| nucleotidyltransferase) (tRNA adenylyl-/cytidylyl- transferase) (tRNA CCA-pyrophosphorylase) (tRNA-NT) Length = 398 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -3 Query: 376 DRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKY 254 D VK+G ++K + L+TG + EVPG E LA Y Sbjct: 202 DEFVKMGIAPGSQKAFQIFLDTGLSEEVPGFRGKKENLALY 242
>PYGM_MACFA (Q8HXW4) Glycogen phosphorylase, muscle form (EC 2.4.1.1)| (Myophosphorylase) Length = 841 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +2 Query: 269 LRVCASTGHLHIPAGLQVHPGHLLGEKLIP 358 +R CA T H +P L+ P HLL E L+P Sbjct: 369 VRTCAYTNHTVLPEALERWPVHLL-ETLLP 397
>PYGM_HUMAN (P11217) Glycogen phosphorylase, muscle form (EC 2.4.1.1)| (Myophosphorylase) Length = 841 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/30 (46%), Positives = 18/30 (60%) Frame = +2 Query: 269 LRVCASTGHLHIPAGLQVHPGHLLGEKLIP 358 +R CA T H +P L+ P HLL E L+P Sbjct: 369 VRTCAYTNHTVLPEALERWPVHLL-ETLLP 397
>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)| (214 kDa nucleoporin) (CAN protein) Length = 2090 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/35 (34%), Positives = 21/35 (60%) Frame = +3 Query: 261 ASSSAFVPPPGTSTFRPVSRSTPDTFSARSSSPIF 365 + SS F PP S+ ++ T +T +A S++P+F Sbjct: 1640 SGSSVFAQPPAASSSSAFNQLTNNTATAPSATPVF 1674
>PERI_XENLA (P48676) Peripherin (Neuronal intermediate filament IF3)| Length = 456 Score = 27.7 bits (60), Expect = 6.9 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +3 Query: 234 SSESCLAYLASSSAF-VPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLSKL 383 SS S + L++S F P PG P SRS+ F RSS+P+ +L ++ Sbjct: 24 SSYSSSSRLSTSRHFGSPSPG-----PSSRSSSSAFRVRSSTPVRVSLDRV 69
>GPMA_STRA5 (Q8E0G9) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 230 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = -3 Query: 388 KANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 233 K L+R + ++ +A L+ G+NV V G + L K+ +QLSD+ Sbjct: 153 KVTLERALPFWEDKIAPA-----LKDGKNVFVGAHGNSIRALVKHIKQLSDD 199
>GPMA_STRA3 (Q8E643) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 230 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = -3 Query: 388 KANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 233 K L+R + ++ +A L+ G+NV V G + L K+ +QLSD+ Sbjct: 153 KVTLERALPFWEDKIAPA-----LKDGKNVFVGAHGNSIRALVKHIKQLSDD 199
>GPMA_STRA1 (Q3K1U2) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 230 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = -3 Query: 388 KANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 233 K L+R + ++ +A L+ G+NV V G + L K+ +QLSD+ Sbjct: 153 KVTLERALPFWEDKIAPA-----LKDGKNVFVGAHGNSIRALVKHIKQLSDD 199
>GLNE_SHIFL (Q7UBI7) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 946 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = +2 Query: 185 IASLV*GTLVVTASAALIGELPCVLGELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPN- 361 I +L+ G + T L+ E P L L+ +CA++ I + L +P LL E L PN Sbjct: 528 ITALLVGIVTRTTYLELLSEFPAALKHLISLCAASP--MIASQLARYP-LLLDELLDPNT 584 Query: 362 LHQP 373 L+QP Sbjct: 585 LYQP 588
>GLNE_ECOLI (P30870) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 946 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = +2 Query: 185 IASLV*GTLVVTASAALIGELPCVLGELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPN- 361 I +L+ G + T L+ E P L L+ +CA++ I + L +P LL E L PN Sbjct: 528 ITALLVGIVTRTTYLELLSEFPAALKHLISLCAASP--MIASQLARYP-LLLDELLDPNT 584 Query: 362 LHQP 373 L+QP Sbjct: 585 LYQP 588
>GLNE_ECOL6 (Q8FDH4) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 946 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = +2 Query: 185 IASLV*GTLVVTASAALIGELPCVLGELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPN- 361 I +L+ G + T L+ E P L L+ +CA++ I + L +P LL E L PN Sbjct: 528 ITALLVGIVTRTTYLELLSEFPAALKHLISLCAASP--MIASQLARYP-LLLDELLDPNT 584 Query: 362 LHQP 373 L+QP Sbjct: 585 LYQP 588
>GLNE_ECO57 (Q8XBM3) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 946 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Frame = +2 Query: 185 IASLV*GTLVVTASAALIGELPCVLGELLRVCASTGHLHIPAGLQVHPGHLLGEKLIPN- 361 I +L+ G + T L+ E P L L+ +CA++ I + L +P LL E L PN Sbjct: 528 ITALLAGIVTRTTYLELLSEFPAALKHLISLCAASP--MIASQLARYP-LLLDELLDPNT 584 Query: 362 LHQP 373 L+QP Sbjct: 585 LYQP 588
>CET1_ASHGO (Q755F7) mRNA capping enzyme beta subunit (EC 3.1.3.33)| (Polynucleotide 5'-triphosphatase) (mRNA 5'-triphosphatase) (TPase) Length = 478 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/48 (33%), Positives = 23/48 (47%) Frame = +1 Query: 37 KAHIICANNDSCTRLLQQQYARHN*IKQTD*APKPNVSMSLNTYIKLA 180 K I +NDSCTR+ + HN K+ D + + LN+ LA Sbjct: 386 KERISYIHNDSCTRIDITKVTNHNKGKRDDAEVTHEIELELNSQALLA 433
>COCA1_MOUSE (Q60847) Collagen alpha-1(XII) chain precursor| Length = 3119 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Frame = -3 Query: 385 ANLDRLVKIGDELLAEKVSGVDLETGRNV------EVPGGGTNAEELAKYAR 248 AN D +V I +E++++ SGVD + G V E P E +KY R Sbjct: 300 ANFDAIVDIQNEIISQVCSGVDEQLGELVSGEEVIEPPSNLVVTELSSKYIR 351
>GUNA_PSEFL (P10476) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) (EGA) Length = 962 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +3 Query: 234 SSESCLAYLASSSAFVPPPGTSTFRPVSRSTPDTFSARSSSPIFTNLS 377 SS S +SSS+ +P +S+ +P S S+ S+ SSS + + S Sbjct: 615 SSSSVPVSSSSSSSIIPSSSSSSIQPSSSSSSMPSSSSSSSSVVASSS 662
>IF4G3_HUMAN (O43432) Eukaryotic translation initiation factor 4 gamma 3| (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII) Length = 1585 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = +3 Query: 285 PPGTSTFRPVSRST--PDTFSARSSSPIFT 368 PP +T V+RST T SA SS PIFT Sbjct: 265 PPSPTTVSSVARSTIAAPTSSALSSQPIFT 294
>TRBM_MOUSE (P15306) Thrombomodulin precursor (TM) (Fetomodulin) (CD141| antigen) Length = 577 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 5/31 (16%) Frame = -1 Query: 360 LGMSFSPRRCPG-----WTWRPAGMWRCPVE 283 LG+ R PG W W G W C VE Sbjct: 217 LGLELVCRAPPGTSEGHWAWEATGAWNCSVE 247
>FPRP_RAT (Q62786) Prostaglandin F2 receptor negative regulator precursor| (Prostaglandin F2-alpha receptor regulatory protein) (Prostaglandin F2-alpha receptor-associated protein) (CD315 antigen) Length = 879 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Frame = -2 Query: 173 LMYVFKLILTFGLGAQSV-----CLI*LCRAYCCCNSLVQES 63 ++ FK L G+G +V CLI C ++ CC V+E+ Sbjct: 825 VLNAFKYPLLIGVGLSTVIGLLSCLIGYCSSHWCCKKEVRET 866
>FPRP_MOUSE (Q9WV91) Prostaglandin F2 receptor negative regulator precursor| (Prostaglandin F2-alpha receptor regulatory protein) (Prostaglandin F2-alpha receptor-associated protein) (CD315 antigen) Length = 879 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 5/42 (11%) Frame = -2 Query: 173 LMYVFKLILTFGLGAQSV-----CLI*LCRAYCCCNSLVQES 63 ++ FK L G+G +V CLI C ++ CC V+E+ Sbjct: 825 VLNAFKYPLLIGVGLSTVIGLLSCLIGYCSSHWCCKKEVRET 866
>DXS_CHLTE (Q8KFI9) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 635 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -3 Query: 334 VSGVDLETGRNVEVPG 287 V G D+ETG+NV+ PG Sbjct: 305 VGGFDIETGKNVKAPG 320
>GPMA_STRMU (P59161) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 230 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = -3 Query: 388 KANLDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 233 K L+R + ++ +A L+ G+NV V G + L K+ +QLSD+ Sbjct: 153 KVTLERALPYWEDKIAPA-----LKDGKNVFVGAHGNSIRALVKHIKQLSDD 199
>GPMA_LACAC (Q5FMJ3) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| (EC 5.4.2.1) (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM) (dPGM) Length = 230 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -3 Query: 379 LDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 233 LDR++ ++ +A DL G+NV + G + L KY +SD+ Sbjct: 156 LDRVMPFWEDNIAP-----DLLDGKNVIIAAHGNSLRALTKYIENISDD 199
>GPMA1_LACJO (Q74LL9) 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase| 1 (EC 5.4.2.1) (Phosphoglyceromutase 1) (PGAM 1) (BPG-dependent PGAM 1) (dPGM 1) Length = 230 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -3 Query: 379 LDRLVKIGDELLAEKVSGVDLETGRNVEVPGGGTNAEELAKYARQLSDE 233 LDR++ ++ +A DL G+NV + G + L KY +SD+ Sbjct: 156 LDRVMPFWEDHIAP-----DLLDGKNVIIAAHGNSLRALTKYIENISDD 199
>ATM_GIBZE (Q4IB89) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase TEL1) (Telomere length regulation protein 1) (ATM homolog) Length = 2813 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = +3 Query: 282 PPPGTSTFRPVSRSTPDTFSARSSSPIFTNLSKLALE 392 P PG+ R RSTP T S R ++P L K LE Sbjct: 202 PAPGSGYSRSGGRSTPSTQSQRRAAPGEGGLLKDVLE 238
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = +3 Query: 234 SSESCLAYLASSSAFVPPPGTSTFRPVSRSTPDTFSARSSSP 359 S+ ++ +ASSS VP P T T P S +T + S +SSP Sbjct: 441 SNGPSVSSVASSS--VPSPATPTLTPTSTATSMSTSVPTSSP 480 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,242,066 Number of Sequences: 219361 Number of extensions: 1037200 Number of successful extensions: 3670 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 3483 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3667 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
