ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart18f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 270 4e-69
2dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic D... 270 4e-69
3dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic D... 270 4e-69
4dbj|AK060374.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
5ref|NM_122393.3| Arabidopsis thaliana S-adenosylmethionine-depen... 48 0.028
6gb|BC068703.1| Xenopus laevis hypothetical protein MGC81128, mRN... 48 0.028
7emb|AL392145.1|ATT4C12 Arabidopsis thaliana DNA chromosome 5, BA... 48 0.028
8gb|BT006128.1| Arabidopsis thaliana clone U50749 putative methyl... 48 0.028
9emb|BX829490.1|CNS09YUX Arabidopsis thaliana Full-length cDNA Co... 48 0.028
10dbj|AK118324.1| Arabidopsis thaliana At5g24840 mRNA for putative... 48 0.028
11gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chromosome... 48 0.028
12gb|AY112021.1| Zea mays CL6378_1 mRNA sequence 46 0.11
13gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete s... 44 0.44
14ref|NM_122392.3| Arabidopsis thaliana unknown protein AT5G24830 ... 42 1.7
15gb|AC116321.4| Mus musculus BAC clone RP23-270L15 from chromosom... 42 1.7
16gb|AC166091.3| Glycine max clone gmw1-11j16, complete sequence 42 1.7
17emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chr... 42 1.7
18gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome... 40 6.9
19gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, com... 40 6.9
20gb|AC124701.2| Mus musculus BAC clone RP24-229N16 from chromosom... 40 6.9
21gb|AC130207.3| Mus musculus BAC clone RP24-461N3 from chromosome... 40 6.9
22ref|XM_774516.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 6.9
23emb|CR376792.13| Zebrafish DNA sequence from clone CH211-37P17 i... 40 6.9
24gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 6.9
25emb|AL080274.21|HS1012F16 Human DNA sequence from clone RP5-1012... 40 6.9
26emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 ... 40 6.9
27emb|AL844599.4| Mouse DNA sequence from clone RP24-129L11 on chr... 40 6.9
28gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence 40 6.9
29ref|XM_932273.1| PREDICTED: Homo sapiens similar to gamma-glutam... 40 6.9
30gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.9
31emb|AL356585.7| Human DNA sequence from clone RP11-341D18 on chr... 40 6.9
32gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome... 40 6.9 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  270 bits (136), Expect = 4e-69
 Identities = 271/316 (85%)
 Strand = Plus / Minus

                                                                           
Query: 193     ctcttgcaaggacatgcgcctgaaaatggcctggaaggtctgccctccattcctcgcgac 252
               |||||||||||| ||||| || || ||||||||||| ||||| |||||||| || || ||
Sbjct: 7131065 ctcttgcaaggagatgcgtctaaagatggcctggaaagtctgacctccatttcttgcaac 7131006

                                                                           
Query: 253     cttctggccttcttcggtggcactagacagtagcttcacaactggatcgacctttatctc 312
               |||||| |||||||| |||||  ||||||||||||| |||||||| ||  | ||| ||||
Sbjct: 7131005 cttctgaccttcttcagtggcggtagacagtagcttgacaactgggtctgcttttgtctc 7130946

                                                                           
Query: 313     ttcctctggaacagcttcgaagagtgggtgtttctccagacatgtgcgcatccatatacc 372
               ||||||||| | ||||||||| || |||||||||||||| ||||  |||||||||   ||
Sbjct: 7130945 ttcctctgggatagcttcgaacagcgggtgtttctccaggcatgaccgcatccattctcc 7130886

                                                                           
Query: 373     aagctcctctacgtcagtaatagtgtatattattcctcccacttccatcacgtaagcgta 432
                |||||||| || || || || || ||||| |||||||||||||||||||| ||||| ||
Sbjct: 7130885 gagctcctccacatctgtgattgtatatatgattcctcccacttccatcacataagcata 7130826

                                                                           
Query: 433     ttcatcgagcaaatgcatgctaatcaccctcctccggtggttcttctccttgaagtgagg 492
                ||||| ||||  |||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 7130825 ctcatctagcagctgcatgctgatcaccctccgccggtggttcttctccttgaagtgagg 7130766

                               
Query: 493     atcagggaacaggaag 508
               ||||||||||||||||
Sbjct: 7130765 atcagggaacaggaag 7130750
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>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0080E19
          Length = 152755

 Score =  270 bits (136), Expect = 4e-69
 Identities = 271/316 (85%)
 Strand = Plus / Minus

                                                                          
Query: 193    ctcttgcaaggacatgcgcctgaaaatggcctggaaggtctgccctccattcctcgcgac 252
              |||||||||||| ||||| || || ||||||||||| ||||| |||||||| || || ||
Sbjct: 151852 ctcttgcaaggagatgcgtctaaagatggcctggaaagtctgacctccatttcttgcaac 151793

                                                                          
Query: 253    cttctggccttcttcggtggcactagacagtagcttcacaactggatcgacctttatctc 312
              |||||| |||||||| |||||  ||||||||||||| |||||||| ||  | ||| ||||
Sbjct: 151792 cttctgaccttcttcagtggcggtagacagtagcttgacaactgggtctgcttttgtctc 151733

                                                                          
Query: 313    ttcctctggaacagcttcgaagagtgggtgtttctccagacatgtgcgcatccatatacc 372
              ||||||||| | ||||||||| || |||||||||||||| ||||  |||||||||   ||
Sbjct: 151732 ttcctctgggatagcttcgaacagcgggtgtttctccaggcatgaccgcatccattctcc 151673

                                                                          
Query: 373    aagctcctctacgtcagtaatagtgtatattattcctcccacttccatcacgtaagcgta 432
               |||||||| || || || || || ||||| |||||||||||||||||||| ||||| ||
Sbjct: 151672 gagctcctccacatctgtgattgtatatatgattcctcccacttccatcacataagcata 151613

                                                                          
Query: 433    ttcatcgagcaaatgcatgctaatcaccctcctccggtggttcttctccttgaagtgagg 492
               ||||| ||||  |||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 151612 ctcatctagcagctgcatgctgatcaccctccgccggtggttcttctccttgaagtgagg 151553

                              
Query: 493    atcagggaacaggaag 508
              ||||||||||||||||
Sbjct: 151552 atcagggaacaggaag 151537
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>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0068B06
          Length = 143712

 Score =  270 bits (136), Expect = 4e-69
 Identities = 271/316 (85%)
 Strand = Plus / Minus

                                                                        
Query: 193  ctcttgcaaggacatgcgcctgaaaatggcctggaaggtctgccctccattcctcgcgac 252
            |||||||||||| ||||| || || ||||||||||| ||||| |||||||| || || ||
Sbjct: 8476 ctcttgcaaggagatgcgtctaaagatggcctggaaagtctgacctccatttcttgcaac 8417

                                                                        
Query: 253  cttctggccttcttcggtggcactagacagtagcttcacaactggatcgacctttatctc 312
            |||||| |||||||| |||||  ||||||||||||| |||||||| ||  | ||| ||||
Sbjct: 8416 cttctgaccttcttcagtggcggtagacagtagcttgacaactgggtctgcttttgtctc 8357

                                                                        
Query: 313  ttcctctggaacagcttcgaagagtgggtgtttctccagacatgtgcgcatccatatacc 372
            ||||||||| | ||||||||| || |||||||||||||| ||||  |||||||||   ||
Sbjct: 8356 ttcctctgggatagcttcgaacagcgggtgtttctccaggcatgaccgcatccattctcc 8297

                                                                        
Query: 373  aagctcctctacgtcagtaatagtgtatattattcctcccacttccatcacgtaagcgta 432
             |||||||| || || || || || ||||| |||||||||||||||||||| ||||| ||
Sbjct: 8296 gagctcctccacatctgtgattgtatatatgattcctcccacttccatcacataagcata 8237

                                                                        
Query: 433  ttcatcgagcaaatgcatgctaatcaccctcctccggtggttcttctccttgaagtgagg 492
             ||||| ||||  |||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 8236 ctcatctagcagctgcatgctgatcaccctccgccggtggttcttctccttgaagtgagg 8177

                            
Query: 493  atcagggaacaggaag 508
            ||||||||||||||||
Sbjct: 8176 atcagggaacaggaag 8161
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>dbj|AK060374.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C07, full
           insert sequence
          Length = 406

 Score =  180 bits (91), Expect = 3e-42
 Identities = 211/251 (84%)
 Strand = Plus / Minus

                                                                       
Query: 193 ctcttgcaaggacatgcgcctgaaaatggcctggaaggtctgccctccattcctcgcgac 252
           |||||||||||| ||||| || || ||||||||||| ||||| |||||||| || || ||
Sbjct: 251 ctcttgcaaggagatgcgtctaaagatggcctggaaagtctgacctccatttcttgcaac 192

                                                                       
Query: 253 cttctggccttcttcggtggcactagacagtagcttcacaactggatcgacctttatctc 312
           |||||| |||||||| |||||| ||||||||||||| |||||||| ||  | ||| ||||
Sbjct: 191 cttctgaccttcttcagtggcagtagacagtagcttgacaactgggtctgcttttgtctc 132

                                                                       
Query: 313 ttcctctggaacagcttcgaagagtgggtgtttctccagacatgtgcgcatccatatacc 372
           ||||||||| | ||||||||| || |||||||||||||| ||||  |||||||||   ||
Sbjct: 131 ttcctctgggatagcttcgaacagcgggtgtttctccaggcatgaccgcatccattctcc 72

                                                                       
Query: 373 aagctcctctacgtcagtaatagtgtatattattcctcccacttccatcacgtaagcgta 432
            |||||||| || || || || || ||||| |||||||||||||||||||| ||||| ||
Sbjct: 71  gagctcctccacatctgtgattgtatatatgattcctcccacttccatcacataagcata 12

                      
Query: 433 ttcatcgagca 443
            ||||| ||||
Sbjct: 11  ctcatctagca 1
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>ref|NM_122393.3| Arabidopsis thaliana S-adenosylmethionine-dependent
           methyltransferase/ methyltransferase AT5G24840 mRNA,
           complete cds
          Length = 935

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 452 ctaatcaccctcctccggtggttcttctccttgaagtgaggatcagggaacaggaa 507
           |||||||| |||||||  || ||||||||||| || || ||||||||||| |||||
Sbjct: 563 ctaatcactctcctcctatgattcttctccttaaaatgtggatcagggaagaggaa 508
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>gb|BC068703.1| Xenopus laevis hypothetical protein MGC81128, mRNA (cDNA clone
           MGC:81128 IMAGE:6317510), complete cds
          Length = 1361

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 481 cttgaagtgaggatcagggaacag 504
           ||||||||||||||||||||||||
Sbjct: 602 cttgaagtgaggatcagggaacag 579
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>emb|AL392145.1|ATT4C12 Arabidopsis thaliana DNA chromosome 5, BAC clone T4C12 (ESSA project)
          Length = 87871

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 452   ctaatcaccctcctccggtggttcttctccttgaagtgaggatcagggaacaggaa 507
             |||||||| |||||||  || ||||||||||| || || ||||||||||| |||||
Sbjct: 68264 ctaatcactctcctcctatgattcttctccttaaaatgtggatcagggaagaggaa 68319
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>gb|BT006128.1| Arabidopsis thaliana clone U50749 putative methyltransferase
           (At5g24840) mRNA, complete cds
          Length = 787

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 452 ctaatcaccctcctccggtggttcttctccttgaagtgaggatcagggaacaggaa 507
           |||||||| |||||||  || ||||||||||| || || ||||||||||| |||||
Sbjct: 494 ctaatcactctcctcctatgattcttctccttaaaatgtggatcagggaagaggaa 439
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>emb|BX829490.1|CNS09YUX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB17ZA11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 559

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 452 ctaatcaccctcctccggtggttcttctccttgaagtgaggatcagggaacaggaa 507
           |||||||| |||||||  || ||||||||||| || || ||||||||||| |||||
Sbjct: 212 ctaatcactctcctcctatgattcttctccttaaaatgtggatcagggaagaggaa 157
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>dbj|AK118324.1| Arabidopsis thaliana At5g24840 mRNA for putative methyltransferase,
           complete cds, clone: RAFL19-60-I12
          Length = 934

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 452 ctaatcaccctcctccggtggttcttctccttgaagtgaggatcagggaacaggaa 507
           |||||||| |||||||  || ||||||||||| || || ||||||||||| |||||
Sbjct: 563 ctaatcactctcctcctatgattcttctccttaaaatgtggatcagggaagaggaa 508
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>gb|AF069716.1|AF069716 Arabidopsis Thaliana BAC F6A4, Chromosome IV, near 60.5 cM, complete
             sequence
          Length = 99123

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 452   ctaatcaccctcctccggtggttcttctccttgaagtgaggatcagggaacaggaa 507
             |||||||| |||||||  || ||||||||||| || || ||||||||||| |||||
Sbjct: 79606 ctaatcactctcctcctatgattcttctccttaaaatgtggatcagggaagaggaa 79551
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>gb|AY112021.1| Zea mays CL6378_1 mRNA sequence
          Length = 1221

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 304 ctttatctcttcctctggaacag 326
           |||||||||||||||||||||||
Sbjct: 570 ctttatctcttcctctggaacag 548
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>gb|AC135413.43| Medicago truncatula clone mth2-16n19, complete sequence
          Length = 92216

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 470   tggttcttctccttgaagtgaggatcagggaacaggaa 507
             ||||||||||| || || ||||||||||| ||||||||
Sbjct: 41173 tggttcttctctttaaaatgaggatcaggaaacaggaa 41210
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>ref|NM_122392.3| Arabidopsis thaliana unknown protein AT5G24830 mRNA, complete cds
          Length = 2894

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 452  ctaatcaccctcctccggtggttcttctccttgaagtgaggatcaggga 500
            |||||||| |||||||  || ||||||||||| || || ||||||||||
Sbjct: 2846 ctaatcactctcctcctatgattcttctccttaaaatgtggatcaggga 2894
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>gb|AC116321.4| Mus musculus BAC clone RP23-270L15 from chromosome 2, complete sequence
          Length = 183636

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    tacacaaatgtataaaaaata 68
             |||||||||||||||||||||
Sbjct: 77944 tacacaaatgtataaaaaata 77964
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>gb|AC166091.3| Glycine max clone gmw1-11j16, complete sequence
          Length = 69947

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 281   agtagcttcacaactggatcgacct 305
             ||||||||||||||||| |||||||
Sbjct: 36746 agtagcttcacaactggttcgacct 36770
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>emb|AL928713.16| Mouse DNA sequence from clone RP23-399M5 on chromosome 2, complete
             sequence
          Length = 212028

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 48    tacacaaatgtataaaaaata 68
             |||||||||||||||||||||
Sbjct: 49884 tacacaaatgtataaaaaata 49904
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>gb|AC165972.4| Mus musculus BAC clone RP23-87D12 from chromosome 17, complete
            sequence
          Length = 199737

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 49   acacaaatgtataaaaaata 68
            ||||||||||||||||||||
Sbjct: 6154 acacaaatgtataaaaaata 6173
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>gb|AC161516.9| Mus musculus chromosome 5, clone RP23-130C18, complete sequence
          Length = 226006

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     ctacacaaatgtataaaaaa 66
              ||||||||||||||||||||
Sbjct: 159573 ctacacaaatgtataaaaaa 159554
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>gb|AC124701.2| Mus musculus BAC clone RP24-229N16 from chromosome 19, complete sequence
          Length = 140801

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    cagtccaggaaagcccaaca 156
              ||||||||||||||||||||
Sbjct: 137287 cagtccaggaaagcccaaca 137306
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>gb|AC130207.3| Mus musculus BAC clone RP24-461N3 from chromosome 19, complete sequence
          Length = 134655

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    cagtccaggaaagcccaaca 156
              ||||||||||||||||||||
Sbjct: 111918 cagtccaggaaagcccaaca 111899
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>ref|XM_774516.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_81_130681_129749) partial mRNA
          Length = 933

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 ttatctcttcctctggaaca 325
           ||||||||||||||||||||
Sbjct: 910 ttatctcttcctctggaaca 891
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>emb|CR376792.13| Zebrafish DNA sequence from clone CH211-37P17 in linkage group 8,
             complete sequence
          Length = 49138

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 41    atctggctacacaaatgtataaaaaata 68
             ||||| |||||||||||||||| |||||
Sbjct: 34240 atctgtctacacaaatgtataagaaata 34213
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 124     gattcatccagcgcagtccaggaa 147
               ||||| ||||||||||||||||||
Sbjct: 2969302 gattcttccagcgcagtccaggaa 2969325
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>emb|AL080274.21|HS1012F16 Human DNA sequence from clone RP5-1012F16 on chromosome 20 Contains a
             novel gene, ESTs, STSs and GSSs, complete sequence
          Length = 74539

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 473   ttcttctccttgaagtgaggatca 496
             |||||||||||||| |||||||||
Sbjct: 62893 ttcttctccttgaaatgaggatca 62916
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>emb|BX294164.13| Zebrafish DNA sequence from clone CH211-266D19 in linkage group 24,
              complete sequence
          Length = 177516

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     acacaaatgtataaaaaata 68
              ||||||||||||||||||||
Sbjct: 102951 acacaaatgtataaaaaata 102970
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>emb|AL844599.4| Mouse DNA sequence from clone RP24-129L11 on chromosome 4, complete
             sequence
          Length = 47235

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 100   acaagaatgtatagaaatgg 119
             ||||||||||||||||||||
Sbjct: 15028 acaagaatgtatagaaatgg 15047
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>gb|AC138019.26| Papio anubis clone rp41-133b2, complete sequence
          Length = 204007

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   catgctaatcaccctcctcc 467
             ||||||||||||||||||||
Sbjct: 46823 catgctaatcaccctcctcc 46842
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>ref|XM_932273.1| PREDICTED: Homo sapiens similar to gamma-glutamyltransferase 2,
            transcript variant 4 (LOC643171), mRNA
          Length = 2490

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 448  catgctaatcaccctcctcc 467
            ||||||||||||||||||||
Sbjct: 2054 catgctaatcaccctcctcc 2035
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 460     cctcctccggtggttcttct 479
               ||||||||||||||||||||
Sbjct: 4302879 cctcctccggtggttcttct 4302898
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>emb|AL356585.7| Human DNA sequence from clone RP11-341D18 on chromosome 22, complete
             sequence
          Length = 186858

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 448   catgctaatcaccctcctcc 467
             ||||||||||||||||||||
Sbjct: 89544 catgctaatcaccctcctcc 89563
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>gb|AC164983.2| Mus musculus BAC clone RP23-16J24 from chromosome 17, complete sequence
          Length = 224370

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    acacaaatgtataaaaaata 68
             ||||||||||||||||||||
Sbjct: 74246 acacaaatgtataaaaaata 74265


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,554,400
Number of Sequences: 3902068
Number of extensions: 4554400
Number of successful extensions: 85066
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84956
Number of HSP's gapped (non-prelim): 110
length of query: 508
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 486
effective length of database: 17,147,199,772
effective search space: 8333539089192
effective search space used: 8333539089192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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