ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart18f03 |
|---|---|
| Clone Library Name | barley_pub |
>ELI5_HORVU (P14895) High molecular mass early light-inducible protein HV58,| chloroplast precursor (ELIP) Length = 231 Score = 152 bits (384), Expect = 2e-37 Identities = 79/87 (90%), Positives = 81/87 (93%), Gaps = 1/87 (1%) Frame = -1 Query: 397 LSVEAARGGGLLDQAGS-GAGLGWFLATAGVFSQASLVPLLQGQSVESKSSGIWSADAEL 221 LSVEAARGGGLLDQ G +GL WFLATAGVFS ASL+PLLQGQSVESKSSGIWSADAEL Sbjct: 145 LSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAEL 204 Query: 220 WNGRFAMLGLVALAATEFITGAPFVNI 140 WNGRFAMLGLVALAATEFITGAPFVNI Sbjct: 205 WNGRFAMLGLVALAATEFITGAPFVNI 231
>ELI9_HORVU (P14897) Low molecular mass early light-inducible protein HV90,| chloroplast precursor (ELIP) Length = 172 Score = 120 bits (302), Expect = 6e-28 Identities = 59/86 (68%), Positives = 67/86 (77%) Frame = -1 Query: 397 LSVEAARGGGLLDQAGSGAGLGWFLATAGVFSQASLVPLLQGQSVESKSSGIWSADAELW 218 L+VEA RG GLL Q GSG G WF T V S ASLVPLLQG+S E ++ I +A+AELW Sbjct: 87 LAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELW 146 Query: 217 NGRFAMLGLVALAATEFITGAPFVNI 140 NGRFAMLGLVALAATE ITGAPF+N+ Sbjct: 147 NGRFAMLGLVALAATEIITGAPFINV 172
>ELI6_HORVU (P14896) Low molecular mass early light-inducible protein HV60,| chloroplast precursor (ELIP) Length = 167 Score = 117 bits (293), Expect = 7e-27 Identities = 56/86 (65%), Positives = 66/86 (76%) Frame = -1 Query: 397 LSVEAARGGGLLDQAGSGAGLGWFLATAGVFSQASLVPLLQGQSVESKSSGIWSADAELW 218 L+VEA RG GLL Q GSG G WF T + S ASLVPLLQG+S E ++ I +A+AELW Sbjct: 82 LAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELW 141 Query: 217 NGRFAMLGLVALAATEFITGAPFVNI 140 NGRFAM+GLVALAATE ITG PF+N+ Sbjct: 142 NGRFAMIGLVALAATEIITGTPFINV 167
>ELI_PEA (P11432) Early light-induced protein, chloroplast precursor (ELIP)| Length = 196 Score = 96.3 bits (238), Expect = 2e-20 Identities = 50/84 (59%), Positives = 59/84 (70%) Frame = -1 Query: 397 LSVEAARGGGLLDQAGSGAGLGWFLATAGVFSQASLVPLLQGQSVESKSSGIWSADAELW 218 + VE A+G GL +Q SG G+ WFL T+ + S ASL+P QG SVESKS I S+DAE W Sbjct: 114 MGVEIAKGQGLSEQL-SGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFW 172 Query: 217 NGRFAMLGLVALAATEFITGAPFV 146 NGR AMLGLVALA TEF+ G V Sbjct: 173 NGRIAMLGLVALAFTEFVKGTSLV 196
>DS22_CRAPL (Q01931) Desiccation stress protein DSP-22, chloroplast precursor| Length = 199 Score = 92.4 bits (228), Expect = 2e-19 Identities = 42/86 (48%), Positives = 62/86 (72%) Frame = -1 Query: 397 LSVEAARGGGLLDQAGSGAGLGWFLATAGVFSQASLVPLLQGQSVESKSSGIWSADAELW 218 + VE A G + Q +G G+ WFL T+ V A+L+P+ +G S E+K++G W++DAE+W Sbjct: 115 VGVELATGRDVFSQVFNG-GVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIW 173 Query: 217 NGRFAMLGLVALAATEFITGAPFVNI 140 NGRFAM+GLVALA TE++ G P +N+ Sbjct: 174 NGRFAMIGLVALAFTEYVKGGPLINV 199
>CBR_DUNBA (P27516) Carotene biosynthesis-related protein CBR, chloroplast| precursor Length = 172 Score = 42.7 bits (99), Expect = 2e-04 Identities = 29/80 (36%), Positives = 41/80 (51%) Frame = -1 Query: 397 LSVEAARGGGLLDQAGSGAGLGWFLATAGVFSQASLVPLLQGQSVESKSSGIWSADAELW 218 L E + G +L Q G L T +FS ASL+P + + + G ++ DAE+ Sbjct: 93 LGAELSTGESVLTQLGDQPTL--IALTFVLFSAASLIPAFARR--KGDAMGPFTPDAEMT 148 Query: 217 NGRFAMLGLVALAATEFITG 158 NGRFAM+G A+ E I G Sbjct: 149 NGRFAMIGFAAMLVYEGIQG 168 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 Query: 241 WSADAELWNGRFAMLGLVALAATEFITG 158 +S E+ NGR AMLG VA E TG Sbjct: 73 FSGAPEIINGRLAMLGFVAALGAELSTG 100
>HEMH_ORYSA (O22101) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 526 Score = 40.4 bits (93), Expect = 0.001 Identities = 19/41 (46%), Positives = 26/41 (63%) Frame = -1 Query: 241 WSADAELWNGRFAMLGLVALAATEFITGAPFVNI*GIVALW 119 W+ AE WNGR AML ++AL E TG F++ GI+ L+ Sbjct: 485 WTKSAETWNGRAAMLAVLALLVLEVTTGEGFLHQWGILPLF 525
>HEMH2_ARATH (O04921) Ferrochelatase-2, chloroplast precursor (EC 4.99.1.1)| (Ferrochelatase II) (Protoheme ferro-lyase 2) (Heme synthetase 2) Length = 512 Score = 38.9 bits (89), Expect = 0.003 Identities = 18/38 (47%), Positives = 24/38 (63%) Frame = -1 Query: 241 WSADAELWNGRFAMLGLVALAATEFITGAPFVNI*GIV 128 W+ AE WNGR AML ++AL E TG F++ GI+ Sbjct: 472 WTKSAETWNGRAAMLAVLALLVLEVTTGKGFLHQWGIL 509
>YCF17_CYAPA (P48367) Hypothetical 5.5 kDa protein ycf17| Length = 49 Score = 37.0 bits (84), Expect = 0.011 Identities = 17/38 (44%), Positives = 25/38 (65%) Frame = -1 Query: 241 WSADAELWNGRFAMLGLVALAATEFITGAPFVNI*GIV 128 +++ AE WNGR AMLG +A TE +TG ++ GI+ Sbjct: 12 FTSGAENWNGRLAMLGFIAALLTESLTGQGTLHFLGIL 49
>YCF17_PORPU (P51355) Hypothetical 5.5 kDa protein ycf17 (ORF48)| Length = 48 Score = 36.6 bits (83), Expect = 0.015 Identities = 15/34 (44%), Positives = 23/34 (67%) Frame = -1 Query: 229 AELWNGRFAMLGLVALAATEFITGAPFVNI*GIV 128 AE WNGRFAM+G +A+ E +TG + + G++ Sbjct: 14 AETWNGRFAMIGFMAVIFIELVTGKGLLYLSGLM 47
>HEMH_ANASP (Q8YQR8) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 388 Score = 35.4 bits (80), Expect = 0.033 Identities = 16/37 (43%), Positives = 26/37 (70%) Frame = -1 Query: 238 SADAELWNGRFAMLGLVALAATEFITGAPFVNI*GIV 128 ++ AE+WNGR AMLG +AL E +TG +++ G++ Sbjct: 352 TSSAEVWNGRIAMLGFIAL-IIELVTGQGLLHMIGLL 387
>K1196_HUMAN (Q96KM6) Zinc finger protein KIAA1196| Length = 892 Score = 35.4 bits (80), Expect = 0.033 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Frame = +2 Query: 176 GGERDEAEHSEAAVPELG-VGAP-DAAGFALHALALQQRHQRRLGENPCGRQEPAQPGAT 349 GGE++E E + ++G + P + G A +L Q HQRR G+ PC P+ P Sbjct: 575 GGEQEERERLRKVLKQMGRLRCPQEGCGAAFSSLMGYQYHQRRCGKPPCEVDSPSFPCTH 634 Query: 350 AG 355 G Sbjct: 635 CG 636
>HEMH_SYNP6 (Q5N2B2) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 387 Score = 32.3 bits (72), Expect = 0.28 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = -1 Query: 232 DAELWNGRFAMLGLVALAATEFITG 158 +AE+WNGR AMLG +AL E +TG Sbjct: 354 NAEVWNGRIAMLGFLAL-LVELLTG 377
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 32.3 bits (72), Expect = 0.28 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 Query: 241 WSADAELWNGRFAMLGLVALAATEFITGAPFVNI 140 W AEL NGR+AMLG+ + E T +N+ Sbjct: 91 WFVQAELVNGRWAMLGVAGMLLPEVFTKIGIINV 124
>HEMH_SYNY3 (P54225) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 387 Score = 32.0 bits (71), Expect = 0.37 Identities = 15/24 (62%), Positives = 18/24 (75%) Frame = -1 Query: 229 AELWNGRFAMLGLVALAATEFITG 158 AE+WNGR AMLG +AL E I+G Sbjct: 355 AEVWNGRLAMLGFIAL-LVELISG 377
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 31.6 bits (70), Expect = 0.48 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = -1 Query: 286 PLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFVN 143 PL G ES W+A AEL + R+AMLG + EF+T +N Sbjct: 90 PLGLGSDPESLK---WNAQAELVHSRWAMLGAAGIFIPEFLTKIGVLN 134
>HEMH_SYNPX (Q7U5G0) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 30.8 bits (68), Expect = 0.81 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -1 Query: 241 WSADAELWNGRFAMLGLVALAATEFITG 158 W+ +E+WNGR AMLG A E I+G Sbjct: 355 WNNSSEVWNGRLAMLGFSAF-LLELISG 381
>HEMH_SYNEL (Q8DGU6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 388 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/40 (47%), Positives = 27/40 (67%) Frame = -1 Query: 247 GIWSADAELWNGRFAMLGLVALAATEFITGAPFVNI*GIV 128 G+ SA AE WNGR AMLG +AL E I+G +++ G++ Sbjct: 351 GMTSA-AERWNGRLAMLGFLAL-MIELISGQGPLHMLGLL 388
>CP1B1_HUMAN (Q16678) Cytochrome P450 1B1 (EC 1.14.14.1) (CYPIB1)| Length = 543 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/90 (28%), Positives = 38/90 (42%), Gaps = 14/90 (15%) Frame = +2 Query: 137 LNVDERRAGDELGGGERDEAEHSEAAVPELGVGAPDAAGFALHALAL--------QQRHQ 292 L+ +++ AGD GGG R + E+ A + ++ + D AL L L Q R Q Sbjct: 298 LSAEKKAAGDSHGGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQ 357 Query: 293 RRLGE------NPCGRQEPAQPGATAGLVE 364 L + PC +P P A L E Sbjct: 358 AELDQVVGRDRLPCMGDQPNLPYVLAFLYE 387
>YCF17_GUITH (O78425) Hypothetical 6.2 kDa protein ycf17| Length = 53 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = -1 Query: 244 IWSAD--AELWNGRFAMLGLVALAATEFIT 161 IW + AE WNGR AM+ + + EFIT Sbjct: 13 IWGFNVYAENWNGRLAMISFLLIICVEFIT 42
>P3C2G_RAT (O70173) Phosphatidylinositol-4-phosphate 3-kinase C2| domain-containing gamma polypeptide (EC 2.7.1.154) (Phosphoinositide 3-Kinase-C2-gamma) (PtdIns-3-kinase C2 gamma) (PI3K-C2gamma) Length = 1505 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%) Frame = +2 Query: 65 QRGYNG*--CYYNLSVQNGNPQRYNPLNVDERRAGDELGGGERDEAEHS 205 Q+G +G C Y + +N P Y+P ++D +E G G+ D E S Sbjct: 155 QQGQSGTEHCNYYVEPENNVPHHYSPYSMDSIPDSEEKGSGDADLVEPS 203
>PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/34 (47%), Positives = 17/34 (50%) Frame = +1 Query: 295 TLGRKPLRSPGTSPARRHCRPGRGAHRHAPPRRT 396 T R S G + A R RP G HR PPRRT Sbjct: 301 TTARVAANSAGRTAASRRSRPATGGHR--PPRRT 332
>PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pknA (EC| 2.7.11.1) Length = 431 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/34 (47%), Positives = 17/34 (50%) Frame = +1 Query: 295 TLGRKPLRSPGTSPARRHCRPGRGAHRHAPPRRT 396 T R S G + A R RP G HR PPRRT Sbjct: 301 TTARVAANSAGRTAASRRSRPATGGHR--PPRRT 332
>PINK1_MOUSE (Q99MQ3) Serine/threonine-protein kinase PINK1, mitochondrial| precursor (EC 2.7.11.1) (PTEN-induced putative kinase protein 1) (BRPK) Length = 580 Score = 30.0 bits (66), Expect = 1.4 Identities = 28/79 (35%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Frame = +2 Query: 173 GGGERDEAEHSEAAVPE-LGVGAPDAAGFALHALA-LQQRHQRRL------GENPCGRQE 328 G GER S A P +G+ PD F ++A L R QR+ G PCGR Sbjct: 41 GRGERPGQVVSPGAQPRPVGLPLPDRYRFFRQSVAGLAARIQRQFMVRARGGAGPCGRAV 100 Query: 329 PAQPGATAGLVEEPTATRR 385 G GL+EE A R Sbjct: 101 FLAFGLGLGLIEEKQAEGR 119
>CRBS_BOVIN (P06504) Beta crystallin S (Gamma crystallin S)| Length = 177 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = -3 Query: 134 DCSAVDFHFELTNCNSTNRCSHVAILYHR*SNFVNLMFRLLSG 6 DC DFH L+ CNS +Y R NF M+ L G Sbjct: 23 DCDCADFHMYLSRCNSIRVEGGTWAVYER-PNFAGYMYILPRG 64
>CRBS_HUMAN (P22914) Beta crystallin S (Gamma crystallin S)| Length = 177 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = -3 Query: 134 DCSAVDFHFELTNCNSTNRCSHVAILYHR*SNFVNLMFRLLSG 6 DC DFH L+ CNS +Y R NF M+ L G Sbjct: 23 DCDCADFHTYLSRCNSIKVEGGTWAVYER-PNFAGYMYILPQG 64
>CJ006_PONPY (Q5REF4) Protein C10orf6 homolog| Length = 1174 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 319 SPGTSPARRHCRPGRGAHRHAPPR 390 +PG+SP R H RPG AH A R Sbjct: 17 APGSSPPRCHLRPGSTAHAAAGKR 40
>CJ006_HUMAN (Q8IX21) Protein C10orf6| Length = 1173 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 319 SPGTSPARRHCRPGRGAHRHAPPR 390 +PG+SP R H RPG AH A R Sbjct: 17 APGSSPPRCHLRPGSTAHAAAGKR 40
>VPP3_HUMAN (Q13488) Vacuolar proton translocating ATPase 116 kDa subunit a| isoform 3 (V-ATPase 116-kDa isoform a3) (Osteoclastic proton pump 116 kDa subunit) (OC-116 kDa) (OC116) (T-cell immune regulator 1) (T cell immune response cDNA7 protein) (TIRC7) Length = 830 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/57 (38%), Positives = 28/57 (49%) Frame = +2 Query: 209 AAVPELGVGAPDAAGFALHALALQQRHQRRLGENPCGRQEPAQPGATAGLVEEPTAT 379 A VP L +G P L L RH+RRL P RQE + AGL++ P A+ Sbjct: 642 AMVPILLLGTP---------LHLLHRHRRRLRRRPADRQEENK----AGLLDLPDAS 685
>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein| Length = 2480 Score = 28.9 bits (63), Expect = 3.1 Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 16/116 (13%) Frame = +2 Query: 95 NLSVQNGNPQRYNPLNV---DERRAGDELGGGERDEAEHSE-----AAV--------PEL 226 NLS + PL+ DE LG +EAE E A V P+ Sbjct: 1695 NLSAFSERTLGLGPLSFTLEDEPALSTALGSQLGEEAEGEEFCPCEACVRKKVSPMSPKA 1754 Query: 227 GVGAPDAAGFALHALALQQRHQRRLGENPCGRQEPAQPGATAGLVEEPTATRRLDG 394 +GA G A LQQ QR+ GE+ G PG T +PT+TR + G Sbjct: 1755 TMGA--TRGPIKEAFDLQQILQRKRGEHTDGEAAEVAPGKTH---TDPTSTRTVQG 1805
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = -1 Query: 241 WSADAELWNGRFAMLGLVALAATEFITGAPFV 146 W A E+ NGRFAMLG A E + A + Sbjct: 95 WLAYGEVINGRFAMLGAAGAIAPEILGKAGLI 126
>AKAP8_CANFA (Q5VK71) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)| (AKAP 95) Length = 698 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 3/66 (4%) Frame = +2 Query: 35 QNSITDGTKLQRGYNG*CYY---NLSVQNGNPQRYNPLNVDERRAGDELGGGERDEAEHS 205 Q + G +GY YY N SV G Y P + + +A D LG G A H Sbjct: 19 QGAYGTGVASWQGYENYNYYGAQNTSVTTGASYSYGPASWETTKASDSLGAG--GPAVHM 76 Query: 206 EAAVPE 223 + PE Sbjct: 77 ASYGPE 82
>MPP2_MOUSE (Q9WV34) MAGUK p55 subfamily member 2 (MPP2 protein) (Dlgh2| protein) Length = 552 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/33 (36%), Positives = 23/33 (69%) Frame = +2 Query: 29 DLQNSITDGTKLQRGYNG*CYYNLSVQNGNPQR 127 DL+ ++ + +++QRGY Y++LS+ N N +R Sbjct: 497 DLRRTVEESSRIQRGYGH--YFDLSLVNSNLER 527
>AKAP8_RAT (Q63014) A-kinase anchor protein 8 (A-kinase anchor protein 95 kDa)| (AKAP 95) Length = 687 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 3/66 (4%) Frame = +2 Query: 35 QNSITDGTKLQRGYNG*CYYNL---SVQNGNPQRYNPLNVDERRAGDELGGGERDEAEHS 205 Q + G +GY YYN SV G P Y P + + +A D G A H Sbjct: 19 QGTYGSGVASWQGYENYSYYNAQNTSVPTGTPYSYGPASWEATKASDG-GLAAGSSAMHV 77 Query: 206 EAAVPE 223 + PE Sbjct: 78 ASFAPE 83
>TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)| Length = 1387 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = -1 Query: 397 LSVEAARGGGLLDQAGSGAGLGWFLATAGVFSQAS 293 LS A GGGL AG G GLG +G S +S Sbjct: 1159 LSTNAGFGGGLNTSAGFGGGLGTSAGFSGGLSTSS 1193
>S19A3_MACFA (Q4R877) Thiamine transporter 2 (ThTr-2) (ThTr2) (Solute carrier| family 19 member 3) Length = 496 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = -1 Query: 304 SQASLVPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFVNI*GI-- 131 S+ L+P L G S + + +W + +L L L T+++ P + + GI Sbjct: 31 SEPFLIPYLSGPDKNLTSEEMTNEIFPVWTYSYLVLLLPVLVLTDYVRYKPVIILQGISF 90 Query: 130 VALWISILN*QIVIALTVV 74 + W+ +L Q V + VV Sbjct: 91 IITWLLLLFGQGVKTMQVV 109
>S19A3_HUMAN (Q9BZV2) Thiamine transporter 2 (ThTr-2) (ThTr2) (Solute carrier| family 19 member 3) Length = 496 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 2/79 (2%) Frame = -1 Query: 304 SQASLVPLLQGQSVESKSSGIWSADAELWNGRFAMLGLVALAATEFITGAPFVNI*GI-- 131 S+ L+P L G S+ I + +W + +L L T+++ P + + GI Sbjct: 31 SEPFLIPYLSGPDKNLTSAEITNEIFPVWTYSYLVLLLPVFVLTDYVRYKPVIILQGISF 90 Query: 130 VALWISILN*QIVIALTVV 74 + W+ +L Q V + VV Sbjct: 91 IITWLLLLFGQGVKTMQVV 109
>MARCS_HUMAN (P29966) Myristoylated alanine-rich C-kinase substrate (MARCKS)| (Protein kinase C substrate, 80 kDa protein, light chain) (PKCSL) (80K-L protein) Length = 331 Score = 28.5 bits (62), Expect = 4.0 Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 7/84 (8%) Frame = +2 Query: 146 DERRAGDE-LGGGERDEAEHSEAAVPELGVGAPDAAGFALHALALQQRHQRRLGENPCGR 322 +E AG+E GG+ EA+ EAAV A D A ++++ G + Sbjct: 219 EEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAAC 278 Query: 323 QEP--AQPGA----TAGLVEEPTA 376 + P A PGA A EEP A Sbjct: 279 EAPSAAGPGAPPEQEAAPAEEPAA 302
>WWTR1_MOUSE (Q9EPK5) WW domain-containing transcription regulator protein 1| (Transcriptional coactivator with PDZ-binding motif) Length = 395 Score = 28.5 bits (62), Expect = 4.0 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = +2 Query: 110 NGNPQRYNPLNVDERRAGDELGGGERDEAEHSEAAVPELGVGAPDAAGFALHALALQQR 286 +G+ R + + G L GG + HS A +LG GA A G A L+Q+ Sbjct: 58 SGSHSRQSSTDSSGGHPGPRLAGGAQHVRSHSSPASLQLGTGAGAAGGPAQQHAHLRQQ 116
>SNX4_NEUCR (Q7SGV1) Sorting nexin-4 (Autophagy-related protein 24)| Length = 493 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +2 Query: 110 NGNPQRYNPLNVDERRAGDELGGGERDEAEHSEAAVPELGVGAP 241 N +P+ Y D+ R GD G E DE +HS + + V P Sbjct: 34 NSSPE-YARSGPDDGRPGDNAAGMEHDELDHSGGEILDCTVSDP 76
>FTSZ_STRGR (P45501) Cell division protein ftsZ| Length = 407 Score = 28.1 bits (61), Expect = 5.3 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 15/86 (17%) Frame = +2 Query: 161 GDELGGGERDEAEH--SEAAVPE----LGVGAPDAAGFALHALALQQ---------RHQR 295 G +LG E +EA SEAA PE G DA G + + R + Sbjct: 264 GSDLGLFEINEAAQLVSEAAHPEANIIFGAVIDDALGDEVRVTVIAAGFDGGQPPARREN 323 Query: 296 RLGENPCGRQEPAQPGATAGLVEEPT 373 LG N R+EPA P ++ PT Sbjct: 324 VLGANSNKREEPAAPARSSAESTRPT 349
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -1 Query: 241 WSADAELWNGRFAMLGLVALAATEFITGAPF 149 W +AEL +GR+AML ++ + + TG P+ Sbjct: 100 WYREAELIHGRWAMLAVLGIFVGQAWTGIPW 130
>TRMB_MYCTU (P67498) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 263 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%) Frame = -1 Query: 286 PLLQGQ----SVESKSSGIWSADAELWNGRFAMLGLVAL 182 P+ GQ S+ S+ SGI A E W + LGL+AL Sbjct: 20 PVASGQLPSTSIRSRRSGISKAQRETWERLWPELGLLAL 58
>TRMB_MYCBO (P67499) tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33)| (tRNA(m7G46)-methyltransferase) Length = 263 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%) Frame = -1 Query: 286 PLLQGQ----SVESKSSGIWSADAELWNGRFAMLGLVAL 182 P+ GQ S+ S+ SGI A E W + LGL+AL Sbjct: 20 PVASGQLPSTSIRSRRSGISKAQRETWERLWPELGLLAL 58
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -1 Query: 241 WSADAELWNGRFAMLGLVALAATEFITGAPFVN 143 ++ +AE+ NGR AM G+ L +TG +N Sbjct: 494 YTKEAEIKNGRLAMNGMFGLEVQSHVTGKSPIN 526
>VM2_REOVD (P11078) Major virion structural protein Mu-1 [Contains: Mu-1C]| Length = 708 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +3 Query: 165 MNSVAASATRPSIAKRPFQSSASALQMPLDLLSTLWP 275 +N+VAASA PS + P + + + +DL++ P Sbjct: 261 VNAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEP 297
>VM2_REOVL (P11077) Major virion structural protein Mu-1 [Contains: Mu-1C]| Length = 707 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +3 Query: 165 MNSVAASATRPSIAKRPFQSSASALQMPLDLLSTLWP 275 +N+VAASA PS + P + + + +DL++ P Sbjct: 261 VNAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEP 297
>VM2_REOVJ (P12397) Major virion structural protein Mu-1 [Contains: Mu-1C]| Length = 707 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = +3 Query: 165 MNSVAASATRPSIAKRPFQSSASALQMPLDLLSTLWP 275 +N+VAASA PS + P + + + +DL++ P Sbjct: 261 VNAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEP 297
>MUC1_MESAU (Q60528) Mucin-1 precursor| Length = 676 Score = 27.7 bits (60), Expect = 6.9 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Frame = +3 Query: 117 IHSATIP*MLTNGAPVMNSVAASATRP--SIAKRPFQSSA-SALQMPLDLLSTLWPCSSG 287 ++SAT P + APV +S SAT P S + P SSA + P+ S+ P SS Sbjct: 134 VNSATTPVHSGSSAPVTSSAVNSATTPVHSGSSAPVTSSAVDSATTPVHSGSSAPPTSSA 193 Query: 288 TSDA 299 + A Sbjct: 194 VNSA 197
>BMP1_MOUSE (P98063) Bone morphogenetic protein 1 precursor (EC 3.4.24.19)| (BMP-1) (Procollagen C-proteinase) (PCP) (Mammalian tolloid protein) (mTld) Length = 991 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/25 (48%), Positives = 12/25 (48%) Frame = +1 Query: 310 PLRSPGTSPARRHCRPGRGAHRHAP 384 P R P R H RPGRG AP Sbjct: 24 PARRPAAGLGRLHLRPGRGGRPGAP 48
>CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interactor with CDK3 1)| (Ik3-1) Length = 568 Score = 27.7 bits (60), Expect = 6.9 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 13/91 (14%) Frame = +2 Query: 164 DELGGGERDEAEHSEA----AVPE---LGVGAPDAAGFALHAL------ALQQRHQRRLG 304 D GG ++E E +A VP LG G P + + L L R+ Sbjct: 159 DGPGGAGQEELEEDDAFTNVQVPSASFLGSGTPGSTSGSRGRLNSFTQGILPIAFSRQNS 218 Query: 305 ENPCGRQEPAQPGATAGLVEEPTATRRLDGQ 397 +N C ++ Q G+T+ L + A RRL Q Sbjct: 219 QNYCALEQSGQGGSTSALEQLQRARRRLISQ 249
>FIP1_SCHPO (Q09919) Plasma membrane iron permease| Length = 397 Score = 27.3 bits (59), Expect = 9.0 Identities = 9/26 (34%), Positives = 15/26 (57%) Frame = -1 Query: 244 IWSADAELWNGRFAMLGLVALAATEF 167 IWS E+W G F+++ +V + F Sbjct: 85 IWSGSEEIWEGVFSLIAVVLITVMGF 110
>ATG20_CANAL (Q59TN9) Autophagy-related protein 20| Length = 407 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = -1 Query: 376 GGGLLDQAGSGAGLGWFLATAGVFSQASLVPLLQGQSVESK 254 GGG AGSG+G G + + +S + L +G+ +E + Sbjct: 266 GGGASGGAGSGSGNGSIITSPKTYSYINSTHLTKGKLIEHR 306
>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)| Length = 1904 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 5/28 (17%) Frame = +1 Query: 319 SPGTSPA---RRHCRPGRGAHRH--APP 387 SPG+S A +RH +PG AH+H APP Sbjct: 151 SPGSSAAGLHQRHHQPGAPAHQHRAAPP 178
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 5/80 (6%) Frame = +2 Query: 137 LNVDERRAGDELGGGERDEAEHSEAAVPELGVGAPDAAGFALHALALQQRHQR-----RL 301 + +D+R +G +G G A S AA AP F A+A + R RL Sbjct: 215 MEMDQRASGAVVGSGTNSPAPASPAAAESPASPAPYVGKFDPKAIARNAKPARASSPVRL 274 Query: 302 GENPCGRQEPAQPGATAGLV 361 G+ G + P A A + Sbjct: 275 GDVKLGDVKVGAPVAAAASI 294
>ANAG_HUMAN (P54802) Alpha-N-acetylglucosaminidase precursor (EC 3.2.1.50)| (N-acetyl-alpha-glucosaminidase) (NAG) [Contains: Alpha-N-acetylglucosaminidase 82 kDa form; Alpha-N-acetylglucosaminidase 77 kDa form] Length = 743 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/32 (34%), Positives = 14/32 (43%) Frame = -1 Query: 241 WSADAELWNGRFAMLGLVALAATEFITGAPFV 146 WS +W + LGL EF TG F+ Sbjct: 168 WSGQEAIWQRVYLALGLTQAEINEFFTGPAFL 199
>TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein| Length = 1729 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%) Frame = -1 Query: 385 AARG-GGLLDQAGSGAGLGW-FLATAGVFSQASLVPLLQGQSVESKS-SGIWSADAELWN 215 AA G GGLL++ G+GAG + G S S P G++ +++ G W + A W+ Sbjct: 1474 AASGLGGLLEEEGAGAGAAQEEVLEPGRDSPPSWRPQPDGEASQTEDVDGTWGSSAARWS 1533
>HEMH_PROMM (Q7V6C6) Ferrochelatase (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme| synthetase) Length = 391 Score = 27.3 bits (59), Expect = 9.0 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -1 Query: 238 SADAELWNGRFAMLGLVALAATEFITG 158 + +E WNGR AMLG A E I+G Sbjct: 356 NTSSEAWNGRIAMLGFAAF-LLELISG 381
>CRBS_CYPCA (P10112) Beta crystallin S (Gamma crystallin S)| Length = 173 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/43 (39%), Positives = 21/43 (48%) Frame = -3 Query: 134 DCSAVDFHFELTNCNSTNRCSHVAILYHR*SNFVNLMFRLLSG 6 DCS DFH L CNS S ++Y R NF+ + L G Sbjct: 21 DCS--DFHAFLNRCNSIRVESGAWVIYER-PNFMGYQYVLTRG 60 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,397,199 Number of Sequences: 219361 Number of extensions: 1060296 Number of successful extensions: 4045 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 3761 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4038 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
