ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart18f01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (E... 152 5e-37
2GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC ... 54 2e-07
3GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.... 46 4e-05
4GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC... 44 3e-04
5GSTXA_ARATH (P46421) Glutathione S-transferase 103-1A (EC 2.5.1.18) 37 0.018
6GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.... 37 0.031
7GSTX3_TOBAC (Q03664) Probable glutathione S-transferase (EC 2.5.... 37 0.031
8GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC... 37 0.031
9GSTX2_TOBAC (Q03663) Probable glutathione S-transferase (EC 2.5.... 36 0.053
10GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (E... 36 0.053
11GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (E... 35 0.12
12GSTX1_TOBAC (Q03662) Probable glutathione S-transferase (EC 2.5.... 35 0.12
13LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methy... 34 0.20
14GSTX1_SOLTU (P32111) Probable glutathione S-transferase (EC 2.5.... 31 1.3
15A1AT_CYPCA (P32759) Alpha-1-antitrypsin homolog precursor 30 3.8
16PACC_TRIRU (Q9C1A4) pH-response transcription factor pacC/RIM101 30 3.8
17FILA_HUMAN (P20930) Filaggrin 30 3.8
18BEM2_ASHGO (Q9HF75) GTPase-activating protein BEM2 30 3.8
19HLES_DROME (Q02308) Protein hairless 29 4.9
20UCRI_GLOVI (Q7NCE1) Cytochrome b6-f complex iron-sulfur subunit ... 28 8.4

>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28|
           kDa cold-induced protein)
          Length = 236

 Score =  152 bits (383), Expect = 5e-37
 Identities = 72/87 (82%), Positives = 76/87 (87%)
 Frame = -1

Query: 413 CSGGKPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWEEWFRAADAA 234
           CS GKPFFGGD +GFVDVVLGGYLGWF AIDK+IGRRLIDPARTP LA WEE FRA DAA
Sbjct: 150 CSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAA 209

Query: 233 KGVVPDDADKMLDFLPTLLAWIASKAK 153
           KGVVPDDADK+L+F  TLL W ASKAK
Sbjct: 210 KGVVPDDADKLLEFRQTLLRWSASKAK 236



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>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)|
           (Protein bronze-2)
          Length = 236

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
 Frame = -1

Query: 410 SGGKPFF-GGDAI-GFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWEEWFRAADA 237
           S G+ FF GGDA  G +D+ LG +L    A +++ G  LID + TPLL  W + F A  A
Sbjct: 148 SNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPA 207

Query: 236 AKGVVPDDADKMLDF 192
           AK V+P D +K++ F
Sbjct: 208 AKRVLP-DTEKVVQF 221



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>GSTX4_TOBAC (Q03666) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PCNT107)
          Length = 221

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 25/76 (32%), Positives = 37/76 (48%)
 Frame = -1

Query: 407 GGKPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWEEWFRAADAAKG 228
           G KP+FGG++ GFVD+ L GY  WF A +          A  P    W +     ++   
Sbjct: 142 GDKPYFGGESFGFVDIALIGYYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAK 199

Query: 227 VVPDDADKMLDFLPTL 180
            +PD   K+L+F+  L
Sbjct: 200 SLPDQ-PKVLEFVKVL 214



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>GSTXC_TOBAC (P49332) Probable glutathione S-transferase parC (EC 2.5.1.18)|
           (Auxin-regulated protein parC)
          Length = 221

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 23/76 (30%), Positives = 37/76 (48%)
 Frame = -1

Query: 407 GGKPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWEEWFRAADAAKG 228
           G +P+FGG++ GFVD+ L G+  WF A +          A  P    W +     ++   
Sbjct: 142 GDRPYFGGESFGFVDIALIGFYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAK 199

Query: 227 VVPDDADKMLDFLPTL 180
            +PD   K+L+F+  L
Sbjct: 200 SLPDQ-PKVLEFVKVL 214



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>GSTXA_ARATH (P46421) Glutathione S-transferase 103-1A (EC 2.5.1.18)|
          Length = 224

 Score = 37.4 bits (85), Expect = 0.018
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
 Frame = -1

Query: 404 GKPFFGGDAIGFVDVVLGGYL------GWFGAIDKIIGRRLIDPARTPLLARWEEWFRAA 243
           GK +FGG  +GF+D V G  +      GW G     IG  +I   + P   RW       
Sbjct: 143 GKDYFGGKTVGFLDFVAGSLIPFCLERGWEG-----IGLEVITEEKFPEFKRWVRNLEKV 197

Query: 242 DAAKGVVP 219
           +  K  VP
Sbjct: 198 EIVKDCVP 205



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>GSTX6_SOYBN (P32110) Probable glutathione S-transferase (EC 2.5.1.18) (Heat|
           shock protein 26A) (G2-4)
          Length = 225

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -1

Query: 401 KPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWEEWF 252
           K FFGG+  G VD+       W     +I G +L    + P+L +W + F
Sbjct: 145 KKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEF 194



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>GSTX3_TOBAC (Q03664) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PCNT103)
          Length = 223

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 21/80 (26%), Positives = 33/80 (41%)
 Frame = -1

Query: 401 KPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWEEWFRAADAAKGVV 222
           K FF GD  GF D+       W G  ++  G  L+   + P  +RW + +      K  +
Sbjct: 139 KKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESL 198

Query: 221 PDDADKMLDFLPTLLAWIAS 162
           P   + +  F     A +AS
Sbjct: 199 PSRDELLAFFRARFQAVVAS 218



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>GSTXA_TOBAC (P25317) Probable glutathione S-transferase parA (EC 2.5.1.18)|
           (Auxin-regulated protein parA) (STR246C protein)
          Length = 220

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = -1

Query: 407 GGKPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWEEWFRAADAAKG 228
           G K +FGGD +GFVDV L  +  WF + +      +   A  P L  W +    +++   
Sbjct: 141 GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSK 198

Query: 227 VVP 219
            +P
Sbjct: 199 SLP 201



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>GSTX2_TOBAC (Q03663) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PGNT35/PCNT111)
          Length = 223

 Score = 35.8 bits (81), Expect = 0.053
 Identities = 19/82 (23%), Positives = 34/82 (41%)
 Frame = -1

Query: 401 KPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWEEWFRAADAAKGVV 222
           K FF GD  GF D+       W G  ++  G  L+   + P  ++W + +         +
Sbjct: 139 KKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESL 198

Query: 221 PDDADKMLDFLPTLLAWIASKA 156
           P   + +  F     A +AS++
Sbjct: 199 PPRDELLAFFRARFQAVVASRS 220



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>GSTX1_NICPL (P50471) Probable glutathione S-transferase MSR-1 (EC 2.5.1.18)|
           (Auxin-regulated protein MSR-1)
          Length = 219

 Score = 35.8 bits (81), Expect = 0.053
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -1

Query: 407 GGKPFFGGDAIGFVDVVLGGYLGWF 333
           G K +FGGD +GFVDV L  +  WF
Sbjct: 141 GNKTYFGGDNLGFVDVALVPFTSWF 165



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>GSTU1_ORYSA (O65032) Probable glutathione S-transferase GSTU1 (EC 2.5.1.18)|
          Length = 231

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
 Frame = -1

Query: 407 GGKPFFGGDA---IGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWEEWFRAADA 237
           G + FFGG     +GFVDV L  +  WF + ++  G  + + A  P LA W       D+
Sbjct: 149 GDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVA--PRLAAWARRCGRIDS 206

Query: 236 AKGVVPDDADKMLDFLPTL 180
               +P   +K+ DF+  L
Sbjct: 207 VVKHLP-SPEKVYDFVGVL 224



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>GSTX1_TOBAC (Q03662) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Auxin-induced protein PGNT1/PCNT110)
          Length = 223

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = -1

Query: 401 KPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWE-EWFRAADAAKGV 225
           K FF GD  GF D+       W G  ++  G  L+   + P   +W  E+   +   + +
Sbjct: 139 KKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESL 198

Query: 224 VPDD 213
            P D
Sbjct: 199 PPRD 202



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>LGUL_SOYBN (P46417) Lactoylglutathione lyase (EC 4.4.1.5) (Methylglyoxalase)|
           (Aldoketomutase) (Glyoxalase I)
          Length = 219

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 22/81 (27%), Positives = 35/81 (43%)
 Frame = -1

Query: 401 KPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARWEEWFRAADAAKGVV 222
           KPF+G D  GFVD+ L  +  WF   +     ++ +    P L  W +     +     +
Sbjct: 142 KPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEE--ECPKLMAWVKRCMERETVSNTL 199

Query: 221 PDDADKMLDFLPTLLAWIASK 159
           P DA K+   +  L   + SK
Sbjct: 200 P-DAKKVYGLIVELQKTLESK 219



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>GSTX1_SOLTU (P32111) Probable glutathione S-transferase (EC 2.5.1.18)|
           (Pathogenesis-related protein 1)
          Length = 217

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 8/62 (12%)
 Frame = -1

Query: 401 KPFFGGDAIGFVDVVLGGYLGWFGAIDKIIGRRLIDPARTPLLARW--------EEWFRA 246
           K  F GD  GF D+V  G   + G ++++ G  L    + P    W        EE+F +
Sbjct: 139 KKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQNEEYFPS 198

Query: 245 AD 240
            D
Sbjct: 199 RD 200



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>A1AT_CYPCA (P32759) Alpha-1-antitrypsin homolog precursor|
          Length = 372

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +3

Query: 117 CQEQTMSRPHGSLGLGGDPSEQGGQEVEHLVGVVRH 224
           CQ  T+S+ + SLG  G  + Q  +  EHL+ ++ H
Sbjct: 49  CQGSTLSQIYSSLGYSGLQASQVNEGYEHLIHMLGH 84



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>PACC_TRIRU (Q9C1A4) pH-response transcription factor pacC/RIM101|
          Length = 758

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +1

Query: 76  HTMKG-LRHTQTNTHARSRRCHGRTVHLALEAIQASRVGKKSSILSASSGTTPLAASAAR 252
           H ++G L +  TN+     + H +  H    A   +     +S++S S+  TP ++ +A 
Sbjct: 380 HYVQGPLSYRTTNSPPTHHQSHHQHPHATATAAATTTAATTASMMSTSAAATPASSISAA 439

Query: 253 NHSSHLAS 276
           + S H ++
Sbjct: 440 SRSPHAST 447



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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 23/65 (35%), Positives = 31/65 (47%)
 Frame = +1

Query: 88  GLRHTQTNTHARSRRCHGRTVHLALEAIQASRVGKKSSILSASSGTTPLAASAARNHSSH 267
           G RHTQ ++  ++   H +    A E    SR   +S+  S  SGT    AS+A   S H
Sbjct: 681 GTRHTQNSSSGQAASSHEQARSSAGER-HGSRHQLQSADSSRHSGTGHGQASSAVRDSGH 739

Query: 268 LASSG 282
             SSG
Sbjct: 740 RGSSG 744



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>BEM2_ASHGO (Q9HF75) GTPase-activating protein BEM2|
          Length = 2071

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
 Frame = +1

Query: 1    EHTNSKIIQHRLPMVGHTACGTFIQHTMKGLRHTQTNTHARSRRCHGRTVHLALEAIQAS 180
            E   S +IQH   +   +A  +    +      T    HA        ++ ++      S
Sbjct: 1642 EAKRSVLIQHPNKVSVSSASSSVSGSSSGSTARTSNPAHAAYALNMAGSLSISAARHGRS 1701

Query: 181  RVGKKSSILSASSGTTPLAASAARNHSS--HLASSGVLAGSISRRPMILS 324
             V  +SS++S ++  T  A+ A+ N +S  H    G   G   RRP  +S
Sbjct: 1702 SVSSRSSVISNTATATSPASGASPNQTSTSHHGGMGKKIGGFLRRPFSIS 1751



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>HLES_DROME (Q02308) Protein hairless|
          Length = 1077

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 20/75 (26%), Positives = 35/75 (46%)
 Frame = +1

Query: 76   HTMKGLRHTQTNTHARSRRCHGRTVHLALEAIQASRVGKKSSILSASSGTTPLAASAARN 255
            HT   L H   + H  +   H    HLA   +  S   + S+  S  + +T  ++S+A +
Sbjct: 983  HTHPHLAHPHQHPHPAALTTHHSPAHLATPKLTDSSTDQMSATSSHRTASTSPSSSSA-S 1041

Query: 256  HSSHLASSGVLAGSI 300
             SS  A+SG  + ++
Sbjct: 1042 ASSSAATSGASSSAM 1056



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>UCRI_GLOVI (Q7NCE1) Cytochrome b6-f complex iron-sulfur subunit (EC 1.10.99.1)|
           (Rieske iron-sulfur protein)
           (Plastohydroquinone:plastocyanin oxidoreductase
           iron-sulfur protein) (ISP) (RISP)
          Length = 186

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -2

Query: 61  HMQCVLPWANDAE*FCCLC 5
           H+ CV+PW N A+ F C C
Sbjct: 111 HLGCVVPWDNGAKQFKCPC 129


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.126    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,599,114
Number of Sequences: 219361
Number of extensions: 967944
Number of successful extensions: 4007
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4005
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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