>DCDA_COREF (Q8RQM6) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP|
           decarboxylase)
          Length = 459

 Score = 31.2 bits (69), Expect = 0.73
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
 Frame = -1

Query: 126 TRICASHCAKGDIFLCDAESLSYPD--*NASLLVVALPGCLCFA 1
           TR+  SHC  GDI + +A   +YP       LL +A  G  C+A
Sbjct: 381 TRVVGSHCESGDILINEA---TYPSDIHTGDLLALAATGAYCYA 421

>ATG16_EMENI (Q5BH90) Autophagy protein 16|
          Length = 202

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
 Frame = +3

Query: 93  RPLRNGKRIYELRTRLTHLRHSYK---LHMRRESKLLNG 200
           R ++NGKRI  + + +THL+   K     +R ++KLL G
Sbjct: 113 RNIQNGKRISSMESEITHLQLRLKDRDEELREKAKLLEG 151

>DCDA_CORGL (P09890) Diaminopimelate decarboxylase (EC 4.1.1.20) (DAP|
           decarboxylase)
          Length = 445

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -1

Query: 126 TRICASHCAKGDIFLCDAESLSYPD--*NASLLVVALPGCLCFA 1
           TRI  SHC  GDI + D     YP    +   L +A  G  C+A
Sbjct: 367 TRIVGSHCESGDILINDE---IYPSDITSGDFLALAATGAYCYA 407

>GOGB1_HUMAN (Q14789) Golgin subfamily B member 1 (Giantin) (Macrogolgin) (372 kDa|
            Golgi complex-associated protein) (GCP372)
          Length = 3259

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +3

Query: 9    INIQAMQPPKDLRFNRDMTKIQHHKEICRPLRNGKRIYELRTRLTHLRHSYKLHMRRESK 188
            INI  ++  K +  ++  T++Q  +++C  L+   +  EL ++L   RH Y       +K
Sbjct: 2252 INISRLEHDKQIWESKAQTEVQLQQKVCDTLQGENK--ELLSQLEETRHLYHSSQNELAK 2309

Query: 189  L 191
            L
Sbjct: 2310 L 2310

>MOD5_YEAST (P07884) tRNA isopentenyltransferase (EC 2.5.1.8)|
           (Isopentenyl-diphosphate: tRNA isopentenyltransferase)
           (IPP transferase) (IPTase) (IPPT)
          Length = 428

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = -1

Query: 99  KGDIFLCDAESLSYPD*NASLLVVAL 22
           KGDI+L DA  LS  D NAS   +A+
Sbjct: 309 KGDIYLLDATDLSQWDTNASQRAIAI 334

>ODP1_BUCAP (Q8K9T9) Pyruvate dehydrogenase E1 component (EC 1.2.4.1)|
          Length = 888

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -1

Query: 252 AGQT*TNGEGLLKQETRCHLATCSLFSCVIY 160
           +G+T  NGEGL  ++   H+ + ++ +CV Y
Sbjct: 630 SGRTTLNGEGLQHEDGHSHIQSLTIPNCVSY 660


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,365,643
Number of Sequences: 219361
Number of extensions: 700477
Number of successful extensions: 1874
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1874
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)