ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart18e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1... 43 4e-04
2HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2... 42 8e-04
3HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3... 40 0.003
4SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3... 34 0.22
5MICA1_HUMAN (Q8TDZ2) NEDD9-interacting protein with calponin hom... 32 0.85
6ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic acyltransferase (EC 2... 31 1.4
7RPOC1_CYACA (O19897) DNA-directed RNA polymerase beta' chain (EC... 30 2.5
8RPOC1_MESVI (Q9MUS6) DNA-directed RNA polymerase beta' chain (EC... 30 2.5
9LCBA_NEIMB (Q51151) Capsular polysaccharide phosphotransferase (... 30 4.2
10RGS12_RAT (O08774) Regulator of G-protein signaling 12 (RGS12) 29 7.2
11WDR7_RAT (Q9ERH3) WD-repeat protein 7 (TGF-beta resistance-assoc... 29 7.2
12UTP20_HUMAN (O75691) Small subunit processome component 20 homol... 28 9.4
13CT128_HUMAN (Q9BQN1) Protein C20orf128 28 9.4

>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1)
          Length = 445

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 19/68 (27%), Positives = 38/68 (55%)
 Frame = -3

Query: 469 PDAEVDSWLGFRFHQLDFGTGAPSAFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHV 290
           P+  V+SW    +  +DFG G+P+ F   ++ ++G    +PSR  +G + L + +   H+
Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSHL 435

Query: 289 AAFEQICY 266
           + F++  Y
Sbjct: 436 SRFKKYFY 443



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>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2)
          Length = 446

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 18/68 (26%), Positives = 38/68 (55%)
 Frame = -3

Query: 469 PDAEVDSWLGFRFHQLDFGTGAPSAFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHV 290
           P+  V+SW    +  +DFG G+P+ F   ++ ++G    +PS+  +G + L + +   H+
Sbjct: 377 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 436

Query: 289 AAFEQICY 266
           + F++  Y
Sbjct: 437 SLFKKYFY 444



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>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3)
          Length = 445

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 18/68 (26%), Positives = 37/68 (54%)
 Frame = -3

Query: 469 PDAEVDSWLGFRFHQLDFGTGAPSAFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHV 290
           P+  V+SW    +  +DFG G P+ F   ++ ++G    +PS+  +G + L + +   H+
Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGNPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 435

Query: 289 AAFEQICY 266
           + F++  Y
Sbjct: 436 SLFKKHFY 443



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>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)|
          Length = 474

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -3

Query: 457 VDSWLGFRFHQLDFGTGAPS-AFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHVAAF 281
           + SW     +++DFG G P    V P++       FM   K   G++++ +  E+ +A F
Sbjct: 404 ISSWCRMGLYEIDFGWGKPIWVTVDPNIKPNKNCFFMNDTKCGEGIEVWASFLEDDMAKF 463

Query: 280 E 278
           E
Sbjct: 464 E 464



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>MICA1_HUMAN (Q8TDZ2) NEDD9-interacting protein with calponin homology and LIM|
           domains (Molecule interacting with CasL protein 1)
          Length = 1067

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -3

Query: 427 QLDFGTGAPSAFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHVAAFEQIC 269
           +L+     PS  VPPD P  G+ +  PS+    G     A+  EH+   E++C
Sbjct: 660 RLEMEAETPSTEVPPD-PEPGVPLTPPSQHQEAGAGDLCALCGEHLYVLERLC 711



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>ANTA_GENTR (Q9ZWR8) Anthocyanin 5-aromatic acyltransferase (EC 2.3.1.153)|
           (5AT)
          Length = 469

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 16/56 (28%), Positives = 31/56 (55%)
 Frame = -3

Query: 439 FRFHQLDFGTGAPSAFVPPDLPFEGLMIFMPSRKANGGVDLFMAVAEEHVAAFEQI 272
           F  + +DFG G P+ F    + +  L+  + SR    GV++ +++ + H+ AF +I
Sbjct: 405 FDSYGVDFGWGKPAKFDITSVDYAELIYVIQSRDFEKGVEIGVSLPKIHMDAFAKI 460



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>RPOC1_CYACA (O19897) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 633

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = +2

Query: 41  C*YSNNQNVRIESSYKHFYS*MVELVTHFDLHTVHTHCIIAVQLFGRSNNHDV 199
           C Y  N N+  +    H++S   + +  +    +  H  I V+ +G  NN D+
Sbjct: 518 CYYLTNNNLANQKGSGHYFSSFEDAIIAYKQKLISLHAFIWVKFYGTINNLDI 570



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>RPOC1_MESVI (Q9MUS6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 668

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 10/46 (21%), Positives = 26/46 (56%)
 Frame = +2

Query: 41  C*YSNNQNVRIESSYKHFYS*MVELVTHFDLHTVHTHCIIAVQLFG 178
           C Y   +++R+  +  H++S + +++  +D   ++ H I+ V+  G
Sbjct: 555 CYYLTTEDIRLRGTKSHYFSSLEQVIMAYDQKKINLHTIVWVRFSG 600



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>LCBA_NEIMB (Q51151) Capsular polysaccharide phosphotransferase (EC 2.7.-.-)|
           (Stealth protein)
          Length = 373

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = +2

Query: 5   YKDSFILLK*DIC*YSNNQNVRIESSYKHFYS*MVELVTHFDLHTVHTHCIIAVQLFGRS 184
           Y D +   K +IC Y N ++   ++ YK        L     LH  H+ CI        S
Sbjct: 300 YLDGYATPKREICYYFNIRSSHAQTQYKKL------LFEKEHLHMPHSFCIND----SSS 349

Query: 185 NNHDVSYDMH 214
           NN D +Y +H
Sbjct: 350 NNADKNYALH 359



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>RGS12_RAT (O08774) Regulator of G-protein signaling 12 (RGS12)|
          Length = 1387

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
 Frame = +3

Query: 330  PLALRDGMKIM----SPSKGRSGGTKADGAPVPKSS*WNLNPSQLSTSASGQ 473
            P++  DG +++     PS+G+    K  GAPV +SS   +N S  + SA G+
Sbjct: 1090 PISSLDGQRVILEERDPSRGKVSTEKQKGAPVKQSS--AVNSSPRNHSAMGE 1139



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>WDR7_RAT (Q9ERH3) WD-repeat protein 7 (TGF-beta resistance-associated|
           protein TRAG)
          Length = 1488

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -1

Query: 201 ETSWLLLLPNNCTAIMQ-CVCTVCRSKWVTSSTI*E*KCL 85
           E + LL+ P NC+A +Q CVC+V     V   ++ E KC+
Sbjct: 514 EITQLLVPPENCSARVQHCVCSVASDHSVGLLSLREKKCI 553



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>UTP20_HUMAN (O75691) Small subunit processome component 20 homolog|
            (Down-regulated in metastasis protein) (Protein Key-1A6)
            (Novel nucleolar protein 73) (NNP73)
          Length = 2785

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 338  LARWHEDHEPLERQVRRHESGRCAGTKIELMEPES 442
            L  +H DH+ LE Q+ + E+   A   IEL EPE+
Sbjct: 1681 LEAFHFDHKTLEEQMGKIENEENAIEAIELPEPEA 1715



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>CT128_HUMAN (Q9BQN1) Protein C20orf128|
          Length = 733

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -3

Query: 328 GVDLFMAVAEEHVAAFEQICYSLD 257
           GV +++ +A+EH+  F ++CY +D
Sbjct: 183 GVPVYLLLAQEHLRHFLEMCYKMD 206


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,717,626
Number of Sequences: 219361
Number of extensions: 1279404
Number of successful extensions: 3184
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3184
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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