ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart18e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104594.1| Zea mays PCO132268 mRNA sequence 74 5e-10
2ref|XM_369516.1| Magnaporthe grisea 70-15 chromosome III hypothe... 56 1e-04
3ref|XM_463912.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
4ref|XM_506692.1| PREDICTED Oryza sativa (japonica cultivar-group... 54 4e-04
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
6dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
7dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
8dbj|AK119758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
9dbj|AK070711.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
10ref|XM_479920.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
11ref|XM_507115.1| PREDICTED Oryza sativa (japonica cultivar-group... 52 0.002
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
13dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
14dbj|AK101577.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
15dbj|AK070034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
16ref|XM_390462.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 50 0.007
17emb|CR942450.2| Xenopus tropicalis finished cDNA, clone TEgg001l04 48 0.027
18gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete se... 46 0.11
19gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete se... 46 0.11
20dbj|AB161683.1| Triticum aestivum WCSP3 mRNA for cold shock doma... 46 0.11
21dbj|AB066265.2| Triticum aestivum WCSP1 mRNA for cold shock prot... 46 0.11
22ref|XM_474793.1| Oryza sativa (japonica cultivar-group), predic... 44 0.42
23gb|AY753659.1| Bombyx mori zinc finger protein mRNA, complete cds 44 0.42
24emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4,... 44 0.42
25dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
26dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.42
27gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.42
28emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa... 44 0.42
29gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
30gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
31gb|CP000243.1| Escherichia coli UTI89, complete genome 42 1.6
32gb|AF516145.1| Lyngbya majuscula barbamide biosynthesis gene clu... 42 1.6
33gb|AY988519.1| Caesio cuning microsatellite Ccun214 sequence 42 1.6
34dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
35dbj|AK070352.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
36dbj|AK066872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
37gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
38gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 6.5
39ref|NM_105420.2| Arabidopsis thaliana ubiquitin-protein ligase A... 40 6.5
40gb|AC102514.13| Mus musculus chromosome 7, clone RP24-419H14, co... 40 6.5
41gb|AC102130.7| Mus musculus chromosome 3, clone RP23-223I2, comp... 40 6.5
42gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EG... 40 6.5
43gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
44gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
45ref|XM_955512.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
46ref|XM_331314.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.5
47gb|AC098390.6| Rattus norvegicus 1 BAC CH230-1M24 (Children's Ho... 40 6.5
48gb|AY588246.1| Homo sapiens epidermal growth factor receptor (er... 40 6.5
49gb|AY438539.1| Aedes albopictus microsatellite Ap2 sequence 40 6.5
50gb|AC084390.1| Mus musculus BAC clone RP23-285H9 from 1, complet... 40 6.5
51gb|AE014075.1| Escherichia coli CFT073, complete genome 40 6.5
52gb|AC156250.2| Xenopus tropicalis clone ISB1-258K10, complete se... 40 6.5
53gb|AC156251.2| Xenopus tropicalis clone ISB1-273O4, complete seq... 40 6.5
54emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chr... 40 6.5
55gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 6.5
56emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on ch... 40 6.5
57gb|AC162877.2| Mus musculus chromosome 7, clone RP24-211E6, comp... 40 6.5
58emb|BX897699.1| Bartonella henselae strain Houston-1, complete g... 40 6.5
59emb|CR861248.1| Pongo pygmaeus mRNA; cDNA DKFZp459P063 (from clo... 40 6.5
60dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 6.5
61gb|AC093885.3| Homo sapiens BAC clone RP11-660P22 from 4, comple... 40 6.5
62gb|BT006484.1| Arabidopsis thaliana At1g67530 gene, complete cds 40 6.5
63gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosom... 40 6.5
64gb|BC102298.1| Bos taurus similar to cellular nucleic acid bindi... 40 6.5
65tpg|BK004004.1| TPA: TPA_exp: Drosophila melanogaster Delta prot... 40 6.5
66gb|AC110556.15| Mus musculus chromosome 5, clone RP23-250G21, co... 40 6.5
67dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
68gb|AC011020.8|AC011020 Arabidopsis thaliana chromosome 1 BAC F12... 40 6.5
69gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7... 40 6.5
70gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 6.5
71gb|AC167467.1| Mus musculus BAC clone RP23-158E17 from chromosom... 40 6.5
72emb|AL672169.13| Mouse DNA sequence from clone RP23-357I18 on ch... 40 6.5
73dbj|AK117197.1| Arabidopsis thaliana At1g67530 mRNA for unknown ... 40 6.5
74ref|XM_316352.2| Anopheles gambiae str. PEST ENSANGP00000004205 ... 40 6.5
75dbj|AK107536.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
76emb|BX004815.6| Zebrafish DNA sequence from clone CH211-31O18 in... 40 6.5
77gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, ... 40 6.5
78gb|U73857.1|ECU73857 Escherichia coli chromosome minutes 6-8 40 6.5
79gb|AE003725.2| Drosophila melanogaster chromosome 3R, section 63... 40 6.5
80gb|AC006504.1|AC006504 Homo sapiens chromosome 19, BAC 326584 (C... 40 6.5
81gb|BC082862.1| Xenopus laevis hypothetical LOC494760, mRNA (cDNA... 40 6.5
82gb|AC005758.1|AC005758 Homo sapiens chromosome 19, cosmid R27946... 40 6.5
83emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb... 40 6.5
84emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chr... 40 6.5
85dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 6.5
86ref|NM_001034224.1| Bos taurus similar to cellular nucleic acid ... 40 6.5
87emb|X01469.1|PLHRP1 Plasmodium gene fragment for histidine-rich ... 40 6.5
88gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 6.5
89gb|M94390.1|LEIHEXBP Leishmania major HEXBP DNA binding protein ... 40 6.5 
>gb|AY104594.1| Zea mays PCO132268 mRNA sequence
          Length = 750

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                       
Query: 317 cctcacttggtgcactcgcgggagatgtggccgggctcgccacagttgtagcaggagcgg 376
           |||||| ||| ||| ||||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct: 274 cctcacgtggggcagtcgcgggcgatgtggccggcctcgccgcagttgtagcaggagcgg 215

            
Query: 377 t 377
           |
Sbjct: 214 t 214



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 446 gtggggcagtcacgggcgatgtggcccggctcgccg 481
           ||||||||||| |||||||||||||| | |||||||
Sbjct: 268 gtggggcagtcgcgggcgatgtggccggcctcgccg 233
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>ref|XM_369516.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG05948.4) partial mRNA
          Length = 549

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 322 cttggtgcactcgcgggagatgtggccgggctcgccacagttgtagca 369
           ||||| ||| ||||| |||| |||||||| ||||||||||||||||||
Sbjct: 471 cttggagcagtcgcgcgagaagtggccggtctcgccacagttgtagca 424



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 448 ggggcagtcacgggcgatgtggcccggct 476
           |||||||||||||| ||||||||| ||||
Sbjct: 167 ggggcagtcacgggagatgtggccaggct 139
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>ref|XM_463912.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1219

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 319 tcacttggtgcactcgcgggagatgtggccgggctcgccacagttgtagcaggagcggt 377
           |||||||  ||| ||||||| |||||| || | |||||| |||||||||||||||||||
Sbjct: 834 tcacttgtggcagtcgcgggcgatgtgtccagcctcgccgcagttgtagcaggagcggt 776



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 343 gtggccgggctcgccacagttgtagcagg 371
           |||||||| |||||| |||||||||||||
Sbjct: 711 gtggccggtctcgccgcagttgtagcagg 683
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>ref|XM_506692.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0088N06.21
           mRNA
          Length = 1250

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 319 tcacttggtgcactcgcgggagatgtggccgggctcgccacagttgtagcaggagcggt 377
           |||||||  ||| ||||||| |||||| || | |||||| |||||||||||||||||||
Sbjct: 832 tcacttgtggcagtcgcgggcgatgtgtccagcctcgccgcagttgtagcaggagcggt 774



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 343 gtggccgggctcgccacagttgtagcagg 371
           |||||||| |||||| |||||||||||||
Sbjct: 709 gtggccggtctcgccgcagttgtagcagg 681
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                          
Query: 319     tcacttggtgcactcgcgggagatgtggccgggctcgccacagttgtagcaggagcggt 377
               |||||||  ||| ||||||| |||||| || | |||||| |||||||||||||||||||
Sbjct: 1103461 tcacttgtggcagtcgcgggcgatgtgtccagcctcgccgcagttgtagcaggagcggt 1103519



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 343     gtggccgggctcgccacagttgtagcagg 371
               |||||||| |||||| |||||||||||||
Sbjct: 1103584 gtggccggtctcgccgcagttgtagcagg 1103612
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>dbj|AP004078.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1020_C02
          Length = 124578

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 319   tcacttggtgcactcgcgggagatgtggccgggctcgccacagttgtagcaggagcggt 377
             |||||||  ||| ||||||| |||||| || | |||||| |||||||||||||||||||
Sbjct: 55985 tcacttgtggcagtcgcgggcgatgtgtccagcctcgccgcagttgtagcaggagcggt 56043



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 343   gtggccgggctcgccacagttgtagcagg 371
             |||||||| |||||| |||||||||||||
Sbjct: 56108 gtggccggtctcgccgcagttgtagcagg 56136
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>dbj|AP005851.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0088N06
          Length = 123454

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 319   tcacttggtgcactcgcgggagatgtggccgggctcgccacagttgtagcaggagcggt 377
             |||||||  ||| ||||||| |||||| || | |||||| |||||||||||||||||||
Sbjct: 92169 tcacttgtggcagtcgcgggcgatgtgtccagcctcgccgcagttgtagcaggagcggt 92227



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 343   gtggccgggctcgccacagttgtagcagg 371
             |||||||| |||||| |||||||||||||
Sbjct: 92292 gtggccggtctcgccgcagttgtagcagg 92320
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>dbj|AK119758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-F11, full
           insert sequence
          Length = 1219

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 319 tcacttggtgcactcgcgggagatgtggccgggctcgccacagttgtagcaggagcggt 377
           |||||||  ||| ||||||| |||||| || | |||||| |||||||||||||||||||
Sbjct: 834 tcacttgtggcagtcgcgggcgatgtgtccagcctcgccgcagttgtagcaggagcggt 776



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 343 gtggccgggctcgccacagttgtagcagg 371
           |||||||| |||||| |||||||||||||
Sbjct: 711 gtggccggtctcgccgcagttgtagcagg 683
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>dbj|AK070711.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061H10, full
           insert sequence
          Length = 1250

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 319 tcacttggtgcactcgcgggagatgtggccgggctcgccacagttgtagcaggagcggt 377
           |||||||  ||| ||||||| |||||| || | |||||| |||||||||||||||||||
Sbjct: 832 tcacttgtggcagtcgcgggcgatgtgtccagcctcgccgcagttgtagcaggagcggt 774



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 343 gtggccgggctcgccacagttgtagcagg 371
           |||||||| |||||| |||||||||||||
Sbjct: 709 gtggccggtctcgccgcagttgtagcagg 681
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>ref|XM_479920.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 963

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 328 gcactcgcgggagatgtggccgggctcgccacagttgtagca 369
           ||||||||| | ||||||||||| |||||| |||||||||||
Sbjct: 665 gcactcgcgagcgatgtggccggtctcgccgcagttgtagca 624
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>ref|XM_507115.1| PREDICTED Oryza sativa (japonica cultivar-group), P0582D05.112 mRNA
          Length = 984

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 328 gcactcgcgggagatgtggccgggctcgccacagttgtagca 369
           ||||||||| | ||||||||||| |||||| |||||||||||
Sbjct: 665 gcactcgcgagcgatgtggccggtctcgccgcagttgtagca 624
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                         
Query: 328     gcactcgcgggagatgtggccgggctcgccacagttgtagca 369
               ||||||||| | ||||||||||| |||||| |||||||||||
Sbjct: 1638996 gcactcgcgagcgatgtggccggtctcgccgcagttgtagca 1639037
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>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0582D05
          Length = 150483

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                       
Query: 328   gcactcgcgggagatgtggccgggctcgccacagttgtagca 369
             ||||||||| | ||||||||||| |||||| |||||||||||
Sbjct: 38496 gcactcgcgagcgatgtggccggtctcgccgcagttgtagca 38537
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>dbj|AK101577.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050L02, full
           insert sequence
          Length = 984

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 328 gcactcgcgggagatgtggccgggctcgccacagttgtagca 369
           ||||||||| | ||||||||||| |||||| |||||||||||
Sbjct: 665 gcactcgcgagcgatgtggccggtctcgccgcagttgtagca 624
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>dbj|AK070034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036A08, full
           insert sequence
          Length = 963

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                     
Query: 328 gcactcgcgggagatgtggccgggctcgccacagttgtagca 369
           ||||||||| | ||||||||||| |||||| |||||||||||
Sbjct: 665 gcactcgcgagcgatgtggccggtctcgccgcagttgtagca 624
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>ref|XM_390462.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG10286.1)
           partial mRNA
          Length = 558

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 332 tcgcgggagatgtggccgggctcgccacagttgtagcagga 372
           ||||| |||||||||||||||| ||| || |||||||||||
Sbjct: 215 tcgcgagagatgtggccgggctggccgcacttgtagcagga 175
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>emb|CR942450.2| Xenopus tropicalis finished cDNA, clone TEgg001l04
          Length = 1493

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 27  caatctcctcatcatcatcaccac 50
           ||||||||||||||||||||||||
Sbjct: 773 caatctcctcatcatcatcaccac 750
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>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence
          Length = 124972

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 31    ctcctcatcatcatcaccacacacaaaaatcaccg 65
             ||||||| ||||||||||||| |||||| ||||||
Sbjct: 47992 ctcctcaacatcatcaccacaaacaaaactcaccg 48026
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>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence
          Length = 127295

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 31    ctcctcatcatcatcaccacacacaaaaatcaccg 65
             ||||||| ||||||||||||| |||||| ||||||
Sbjct: 78491 ctcctcaacatcatcaccacaaacaaaactcaccg 78457
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>dbj|AB161683.1| Triticum aestivum WCSP3 mRNA for cold shock domain protein 3,
           complete cds
          Length = 1025

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 323 ttggtgcactcgcgggagatgtggccgggctcgcc 357
           |||| |||||||||||||| |||||||| ||||||
Sbjct: 726 ttggggcactcgcgggagaagtggccggactcgcc 692
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>dbj|AB066265.2| Triticum aestivum WCSP1 mRNA for cold shock protein-1, complete cds
          Length = 1029

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 323 ttggtgcactcgcgggagatgtggccgggctcgcc 357
           |||| |||||||||||||| |||||||| ||||||
Sbjct: 738 ttggggcactcgcgggagaagtggccggactcgcc 704
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>ref|XM_474793.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1599

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 343 gtggccgggctcgccacagttgtagcagga 372
           ||||||| ||||||||||||||||| ||||
Sbjct: 93  gtggccgagctcgccacagttgtaggagga 64
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>gb|AY753659.1| Bombyx mori zinc finger protein mRNA, complete cds
          Length = 1819

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 328 gcactcgcgggagatgtggccgggct 353
           ||||||||| ||||||||||||||||
Sbjct: 462 gcactcgcgcgagatgtggccgggct 437
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>emb|AL606449.4|OSJN00004 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014F04,
             complete sequence
          Length = 173903

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 343   gtggccgggctcgccacagttgtagcagga 372
             ||||||| ||||||||||||||||| ||||
Sbjct: 20209 gtggccgagctcgccacagttgtaggagga 20180
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 343     gtggccgggctcgccacagttgtagcagga 372
               ||||||| ||||||||||||||||| ||||
Sbjct: 6744107 gtggccgagctcgccacagttgtaggagga 6744078
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 351      gctcgccacagttgtagcagga 372
                ||||||||||||||||||||||
Sbjct: 14553383 gctcgccacagttgtagcagga 14553362



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 30      tctcctcatcatcatcacca 49
               ||||||||||||||||||||
Sbjct: 2610072 tctcctcatcatcatcacca 2610053
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 351      gctcgccacagttgtagcagga 372
                ||||||||||||||||||||||
Sbjct: 14507667 gctcgccacagttgtagcagga 14507646



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 30      tctcctcatcatcatcacca 49
               ||||||||||||||||||||
Sbjct: 2610016 tctcctcatcatcatcacca 2609997
to top
>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 158261

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 351    gctcgccacagttgtagcagga 372
              ||||||||||||||||||||||
Sbjct: 107910 gctcgccacagttgtagcagga 107931
to top
>gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0062O09 map near S6115, complete sequence
          Length = 148654

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 351   gctcgccacagttgtagcagg 371
             |||||||||||||||||||||
Sbjct: 27787 gctcgccacagttgtagcagg 27807
to top
>gb|AC136148.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0029K08, complete sequence
          Length = 136687

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 28     aatctcctcatcatcatcacc 48
              |||||||||||||||||||||
Sbjct: 122583 aatctcctcatcatcatcacc 122563
to top
>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 50     cacacaaaaatcaccgacaataatc 74
              |||| ||||||||||||||||||||
Sbjct: 341263 cacaaaaaaatcaccgacaataatc 341239
to top
>gb|AF516145.1| Lyngbya majuscula barbamide biosynthesis gene cluster, complete
             sequence
          Length = 40156

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 127   aattcatagcaaaattaacca 147
             |||||||||||||||||||||
Sbjct: 15425 aattcatagcaaaattaacca 15445
to top
>gb|AY988519.1| Caesio cuning microsatellite Ccun214 sequence
          Length = 740

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 148 tcacacggactgactgactga 168
           |||||||||||||||||||||
Sbjct: 706 tcacacggactgactgactga 726
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 28       aatctcctcatcatcatcacc 48
                |||||||||||||||||||||
Sbjct: 21464833 aatctcctcatcatcatcacc 21464813



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 351      gctcgccacagttgtagcagg 371
                |||||||||||||||||||||
Sbjct: 12612048 gctcgccacagttgtagcagg 12612028
to top
>dbj|AK070352.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051F10, full
           insert sequence
          Length = 1023

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 28  aatctcctcatcatcatcacc 48
           |||||||||||||||||||||
Sbjct: 754 aatctcctcatcatcatcacc 734
to top
>dbj|AK066872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084C07, full
            insert sequence
          Length = 3335

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 28   aatctcctcatcatcatcacc 48
            |||||||||||||||||||||
Sbjct: 3047 aatctcctcatcatcatcacc 3027
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 28       aatctcctcatcatcatcacc 48
                |||||||||||||||||||||
Sbjct: 21775032 aatctcctcatcatcatcacc 21775012



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 351      gctcgccacagttgtagcagg 371
                |||||||||||||||||||||
Sbjct: 12691355 gctcgccacagttgtagcagg 12691335
to top
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     aaaaatcaccgacaataatc 74
              ||||||||||||||||||||
Sbjct: 278276 aaaaatcaccgacaataatc 278295
to top
>ref|NM_105420.2| Arabidopsis thaliana ubiquitin-protein ligase AT1G67530 mRNA,
            complete cds
          Length = 2755

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 31   ctcctcatcatcatcaccacacacaaaa 58
            |||||||||||||||| || ||||||||
Sbjct: 1424 ctcctcatcatcatcatcagacacaaaa 1397
to top
>gb|AC102514.13| Mus musculus chromosome 7, clone RP24-419H14, complete sequence
          Length = 140911

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     tcatcaccacacacaaaaat 60
              ||||||||||||||||||||
Sbjct: 111824 tcatcaccacacacaaaaat 111843
to top
>gb|AC102130.7| Mus musculus chromosome 3, clone RP23-223I2, complete sequence
          Length = 176409

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 32     tcctcatcatcatcaccaca 51
              ||||||||||||||||||||
Sbjct: 120836 tcctcatcatcatcaccaca 120855
to top
>gb|AF288738.1| Homo sapiens epidermal growth factor receptor (EGFR) gene, complete cds,
              alternatively spliced; and 5S ribosomal RNA gene, complete
              sequence
          Length = 197496

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     ctcctcatcatcatcaccac 50
              ||||||||||||||||||||
Sbjct: 157204 ctcctcatcatcatcaccac 157185



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     ctcctcatcatcatcaccac 50
              ||||||||||||||||||||
Sbjct: 157105 ctcctcatcatcatcaccac 157086
to top
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
              complete sequence
          Length = 149870

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 146    catcacacggactgactgactgac 169
              |||||||| |||||||||||||||
Sbjct: 103769 catcacacagactgactgactgac 103746
to top
>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07,
             complete sequence
          Length = 156163

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    catcatcatcaccacacaca 55
             ||||||||||||||||||||
Sbjct: 12557 catcatcatcaccacacaca 12538
to top
>ref|XM_955512.1| Neurospora crassa OR74A hypothetical protein (NCU08923.1) partial
           mRNA
          Length = 552

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 322 cttggtgcactcgcgggagatgtggccgggctcgccacagttgtagca 369
           ||||| ||| || ||||||| |||||| | |||||| |||||||||||
Sbjct: 474 cttggggcagtcacgggagaagtggccagactcgccgcagttgtagca 427
to top
>ref|XM_331314.1| Neurospora crassa OR74A hypothetical protein (NCU08923.1) partial
           mRNA
          Length = 552

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                           
Query: 322 cttggtgcactcgcgggagatgtggccgggctcgccacagttgtagca 369
           ||||| ||| || ||||||| |||||| | |||||| |||||||||||
Sbjct: 474 cttggggcagtcacgggagaagtggccagactcgccgcagttgtagca 427
to top
>gb|AC098390.6| Rattus norvegicus 1 BAC CH230-1M24 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 196477

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   tcatcaccacacacaaaaat 60
            ||||||||||||||||||||
Sbjct: 1621 tcatcaccacacacaaaaat 1640
to top
>gb|AY588246.1| Homo sapiens epidermal growth factor receptor (erythroblastic leukemia
              viral (v-erb-b) oncogene homolog, avian) (EGFR) gene,
              complete cds
          Length = 192168

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     ctcctcatcatcatcaccac 50
              ||||||||||||||||||||
Sbjct: 149922 ctcctcatcatcatcaccac 149903



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     ctcctcatcatcatcaccac 50
              ||||||||||||||||||||
Sbjct: 149823 ctcctcatcatcatcaccac 149804
to top
>gb|AY438539.1| Aedes albopictus microsatellite Ap2 sequence
          Length = 122

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  ctcctcatcatcatcaccac 50
           ||||||||||||||||||||
Sbjct: 100 ctcctcatcatcatcaccac 81
to top
>gb|AC084390.1| Mus musculus BAC clone RP23-285H9 from 1, complete sequence
          Length = 177050

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 298   gggggaggggcagagatccc 317
             ||||||||||||||||||||
Sbjct: 69800 gggggaggggcagagatccc 69781
to top
>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aaaaatcaccgacaataatc 74
              ||||||||||||||||||||
Sbjct: 405785 aaaaatcaccgacaataatc 405766
to top
>gb|AC156250.2| Xenopus tropicalis clone ISB1-258K10, complete sequence
          Length = 79665

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    ctcctcatcatcatcaccac 50
             ||||||||||||||||||||
Sbjct: 48565 ctcctcatcatcatcaccac 48584
to top
>gb|AC156251.2| Xenopus tropicalis clone ISB1-273O4, complete sequence
          Length = 52150

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ctcctcatcatcatcaccac 50
             ||||||||||||||||||||
Sbjct: 19970 ctcctcatcatcatcaccac 19951
to top
>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete
             sequence
          Length = 129844

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ctcctcatcatcatcaccac 50
             ||||||||||||||||||||
Sbjct: 34360 ctcctcatcatcatcaccac 34341
to top
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aaaaatcaccgacaataatc 74
              ||||||||||||||||||||
Sbjct: 320514 aaaaatcaccgacaataatc 320495
to top
>emb|AL157814.14| Human DNA sequence from clone RP11-285E18 on chromosome 13q22.1-22.3
              Contains a novel gene, complete sequence
          Length = 111350

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 27     caatctcctcatcatcatcaccac 50
              ||||||| ||||||||||||||||
Sbjct: 100889 caatctcatcatcatcatcaccac 100912
to top
>gb|AC162877.2| Mus musculus chromosome 7, clone RP24-211E6, complete sequence
          Length = 158727

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     tcatcaccacacacaaaaat 60
              ||||||||||||||||||||
Sbjct: 128839 tcatcaccacacacaaaaat 128820
to top
>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    gaccaattcatagcaaaatt 142
              ||||||||||||||||||||
Sbjct: 328397 gaccaattcatagcaaaatt 328378
to top
>emb|CR861248.1| Pongo pygmaeus mRNA; cDNA DKFZp459P063 (from clone DKFZp459P063)
          Length = 4127

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   caatctcctcatcatcatca 46
            ||||||||||||||||||||
Sbjct: 2174 caatctcctcatcatcatca 2155
to top
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     aaaaatcaccgacaataatc 74
              ||||||||||||||||||||
Sbjct: 320514 aaaaatcaccgacaataatc 320495
to top
>gb|AC093885.3| Homo sapiens BAC clone RP11-660P22 from 4, complete sequence
          Length = 173960

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 136   caaaattaaccatcacacggactgactg 163
             ||||| ||||||||||| ||||||||||
Sbjct: 92308 caaaaataaccatcacaaggactgactg 92281
to top
>gb|BT006484.1| Arabidopsis thaliana At1g67530 gene, complete cds
          Length = 2349

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 31   ctcctcatcatcatcaccacacacaaaa 58
            |||||||||||||||| || ||||||||
Sbjct: 1245 ctcctcatcatcatcatcagacacaaaa 1218
to top
>gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosome 14, complete
             sequence
          Length = 154626

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tctcctcatcatcatcacca 49
             ||||||||||||||||||||
Sbjct: 16159 tctcctcatcatcatcacca 16140
to top
>gb|BC102298.1| Bos taurus similar to cellular nucleic acid binding protein 1, mRNA
           (cDNA clone MGC:127608 IMAGE:7947571), complete cds
          Length = 1531

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 343 gtggccgggctcgccacagttgtagcag 370
           ||||||||||| ||| ||||||||||||
Sbjct: 430 gtggccgggcttgccgcagttgtagcag 403
to top
>tpg|BK004004.1| TPA: TPA_exp: Drosophila melanogaster Delta protein (Dl) gene, complete
             cds
          Length = 38445

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ctcctcatcatcatcaccac 50
             ||||||||||||||||||||
Sbjct: 30246 ctcctcatcatcatcaccac 30227
to top
>gb|AC110556.15| Mus musculus chromosome 5, clone RP23-250G21, complete sequence
          Length = 214445

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 155    gactgactgactgacttaactttc 178
              ||||||||||||||||| ||||||
Sbjct: 164236 gactgactgactgacttgactttc 164259
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 146      catcacacggactgactgactgac 169
                |||||||| |||||||||||||||
Sbjct: 20105444 catcacacagactgactgactgac 20105421



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 36       catcatcatcaccacacaca 55
                ||||||||||||||||||||
Sbjct: 18372720 catcatcatcaccacacaca 18372701
to top
>gb|AC011020.8|AC011020 Arabidopsis thaliana chromosome 1 BAC F12B7 genomic sequence, complete
             sequence
          Length = 91529

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 31    ctcctcatcatcatcaccacacacaaaa 58
             |||||||||||||||| || ||||||||
Sbjct: 42354 ctcctcatcatcatcatcagacacaaaa 42327
to top
>gb|AC006977.3|AC006977 Homo sapiens PAC clone RP5-1091E12 from 7p11.2-p21, complete sequence
          Length = 177998

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     ctcctcatcatcatcaccac 50
              ||||||||||||||||||||
Sbjct: 157204 ctcctcatcatcatcaccac 157185



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     ctcctcatcatcatcaccac 50
              ||||||||||||||||||||
Sbjct: 157105 ctcctcatcatcatcaccac 157086
to top
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     aaaaatcaccgacaataatc 74
              ||||||||||||||||||||
Sbjct: 280828 aaaaatcaccgacaataatc 280847
to top
>gb|AC167467.1| Mus musculus BAC clone RP23-158E17 from chromosome 9, complete sequence
          Length = 212426

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     ctcctcatcatcatcaccac 50
              ||||||||||||||||||||
Sbjct: 136938 ctcctcatcatcatcaccac 136919
to top
>emb|AL672169.13| Mouse DNA sequence from clone RP23-357I18 on chromosome X, complete
             sequence
          Length = 217552

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 292   atagaggggggaggggcaga 311
             ||||||||||||||||||||
Sbjct: 61326 atagaggggggaggggcaga 61345
to top
>dbj|AK117197.1| Arabidopsis thaliana At1g67530 mRNA for unknown protein, complete
            cds, clone: RAFL16-74-G20
          Length = 2773

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 31   ctcctcatcatcatcaccacacacaaaa 58
            |||||||||||||||| || ||||||||
Sbjct: 1442 ctcctcatcatcatcatcagacacaaaa 1415
to top
>ref|XM_316352.2| Anopheles gambiae str. PEST ENSANGP00000004205 (ENSANGG00000003332),
            partial mRNA
          Length = 2903

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 155  gactgactgactgacttaac 174
            ||||||||||||||||||||
Sbjct: 2580 gactgactgactgacttaac 2561
to top
>dbj|AK107536.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-H04, full
           insert sequence
          Length = 1032

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 36  catcatcatcaccacacaca 55
           ||||||||||||||||||||
Sbjct: 796 catcatcatcaccacacaca 815
to top
>emb|BX004815.6| Zebrafish DNA sequence from clone CH211-31O18 in linkage group 9,
             complete sequence
          Length = 172899

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 155   gactgactgactgacttaactttc 178
             |||||||||||||||| |||||||
Sbjct: 51634 gactgactgactgactgaactttc 51611
to top
>gb|AC007053.15|AC007053 Drosophila melanogaster, chromosome 3R, region 92A1-92A2, BAC clone
             BACR48K23, complete sequence
          Length = 173564

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    ctcctcatcatcatcaccac 50
             ||||||||||||||||||||
Sbjct: 67851 ctcctcatcatcatcaccac 67870
to top
>gb|U73857.1|ECU73857 Escherichia coli chromosome minutes 6-8
          Length = 128824

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    aaaaatcaccgacaataatc 74
             ||||||||||||||||||||
Sbjct: 29087 aaaaatcaccgacaataatc 29068
to top
>gb|AE003725.2| Drosophila melanogaster chromosome 3R, section 63 of 118 of the complete
              sequence
          Length = 253323

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     ctcctcatcatcatcaccac 50
              ||||||||||||||||||||
Sbjct: 216576 ctcctcatcatcatcaccac 216595
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>gb|AC006504.1|AC006504 Homo sapiens chromosome 19, BAC 326584 (CIT-B-459F4), complete sequence
          Length = 210137

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     atcaccacacacaaaaatca 62
              ||||||||||||||||||||
Sbjct: 200529 atcaccacacacaaaaatca 200510
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>gb|BC082862.1| Xenopus laevis hypothetical LOC494760, mRNA (cDNA clone MGC:81963
           IMAGE:7010202), complete cds
          Length = 2033

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 27  caatctcctcatcatcatcaccac 50
           |||||||||| |||||||||||||
Sbjct: 584 caatctcctcctcatcatcaccac 561
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>gb|AC005758.1|AC005758 Homo sapiens chromosome 19, cosmid R27946, complete sequence
          Length = 41414

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 43   atcaccacacacaaaaatca 62
            ||||||||||||||||||||
Sbjct: 4926 atcaccacacacaaaaatca 4907
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>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 136490

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 30    tctcctcatcatcatcacca 49
             ||||||||||||||||||||
Sbjct: 57937 tctcctcatcatcatcacca 57956
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>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete
              sequence
          Length = 218753

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 293    tagaggggggaggggcagagatcc 316
              ||||||||| ||||||||||||||
Sbjct: 202489 tagagggggaaggggcagagatcc 202466
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>dbj|AP006096.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10G09, TM0173b,
             complete sequence
          Length = 66866

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 344   tggccgggctcgccacagttgtagcagg 371
             ||||| |||| |||||||||||||||||
Sbjct: 46132 tggcctggcttgccacagttgtagcagg 46105
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>ref|NM_001034224.1| Bos taurus similar to cellular nucleic acid binding protein 1
           (MGC127608), mRNA
          Length = 1531

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 343 gtggccgggctcgccacagttgtagcag 370
           ||||||||||| ||| ||||||||||||
Sbjct: 430 gtggccgggcttgccgcagttgtagcag 403
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>emb|X01469.1|PLHRP1 Plasmodium gene fragment for histidine-rich protein
          Length = 1648

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 31  ctcctcatcatcatcaccac 50
           ||||||||||||||||||||
Sbjct: 744 ctcctcatcatcatcaccac 763
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     aaaaatcaccgacaataatc 74
              ||||||||||||||||||||
Sbjct: 348625 aaaaatcaccgacaataatc 348644
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>gb|M94390.1|LEIHEXBP Leishmania major HEXBP DNA binding protein (HEXBP) gene, complete cds
          Length = 1973

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 442  gctggtggggcagtcacgggcgatgtggcccggctcgccg 481
            |||| ||||||||||||||  ||||||||| | |||||||
Sbjct: 1404 gctgctggggcagtcacggctgatgtggccggcctcgccg 1365


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,252,117
Number of Sequences: 3902068
Number of extensions: 3252117
Number of successful extensions: 107234
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 106509
Number of HSP's gapped (non-prelim): 724
length of query: 481
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 459
effective length of database: 17,147,199,772
effective search space: 7870564695348
effective search space used: 7870564695348
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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