ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart18d09 |
|---|---|
| Clone Library Name | barley_pub |
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 57.4 bits (137), Expect = 2e-08 Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 2/118 (1%) Frame = -2 Query: 470 LKHAAQVIHDEVAKVDGAYFQSFVDFACSGAAEKEGLARSAVCKDAQC--PDVEVDSWLT 297 L A + + + +D Y +S +D S K GL + + P+V V+SW Sbjct: 330 LTDTAGKVQEALKGLDDDYLRSAIDHTES----KPGLPVPYMGSPEKTLYPNVLVNSWGR 385 Query: 296 FPFYELNFGTGSPSYFMPAYFPTEGMLFLVPSNFGDGSVDAFVPLFQENLQAFKECCY 123 P+ ++FG GSP++F + +G FL+PS GDGS+ + LF +L FK+ Y Sbjct: 386 IPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSHLSRFKKYFY 443
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 57.0 bits (136), Expect = 2e-08 Identities = 27/68 (39%), Positives = 41/68 (60%) Frame = -2 Query: 326 PDVEVDSWLTFPFYELNFGTGSPSYFMPAYFPTEGMLFLVPSNFGDGSVDAFVPLFQENL 147 P+V V+SW P+ ++FG GSP++F + +G FL+PS GDGS+ + LF +L Sbjct: 377 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 436 Query: 146 QAFKECCY 123 FK+ Y Sbjct: 437 SLFKKYFY 444
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 55.5 bits (132), Expect = 7e-08 Identities = 26/68 (38%), Positives = 41/68 (60%) Frame = -2 Query: 326 PDVEVDSWLTFPFYELNFGTGSPSYFMPAYFPTEGMLFLVPSNFGDGSVDAFVPLFQENL 147 P+V V+SW P+ ++FG G+P++F + +G FL+PS GDGS+ + LF +L Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGNPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 435 Query: 146 QAFKECCY 123 FK+ Y Sbjct: 436 SLFKKHFY 443
>PLSX_SYNP6 (Q5N5X4) Fatty acid/phospholipid synthesis protein plsX| Length = 346 Score = 32.7 bits (73), Expect = 0.48 Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Frame = +3 Query: 171 EGIDAAVAEVGRDEEEHPLRGEVGRHEVAR-APRAEVQLVERERQPAVHLHVRALRVLAH 347 E + + E+ RDE +RG+VG + R R + +L E A+ L V + +++H Sbjct: 240 EAVGSVFLEIIRDELPRGMRGKVGSTLLRRNLRRIKQRLDHAEHGGALLLGVNGICIISH 299 Query: 348 GAPREPLLLGGAGAREVHEGLEVRAVHLGHLVVDHLGSV 464 G+ + P ++ + + + V+DHL + Sbjct: 300 GSSKAP---------SIYSAIRLAVEAAENRVIDHLHQI 329
>RF1_PSESM (Q888C1) Peptide chain release factor 1 (RF-1)| Length = 360 Score = 32.3 bits (72), Expect = 0.63 Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 15/112 (13%) Frame = +3 Query: 141 RLEVLLE*G--HEGIDAAVAEVGRDEEEHPLRGEVGRHEVARAPRAEVQ----------- 281 R+E+L E H G +A V D L+ E G H V R P+ E Q Sbjct: 147 RVEILSENEGEHGGYKEVIARVEGDSVYGKLKFESGAHRVQRVPKTESQGRIHTSACTVA 206 Query: 282 -LVERERQPAVHLHVRALRVLAHGAPREPLLLGGAGAREVHE-GLEVRAVHL 431 L E + Q A+ ++ LRV + + GAG + V++ +R HL Sbjct: 207 VLPEPDEQQAIEINPADLRVDTYRS-------SGAGGQHVNKTDSAIRITHL 251
>RF1_PSEPK (Q88PW5) Peptide chain release factor 1 (RF-1)| Length = 360 Score = 32.0 bits (71), Expect = 0.82 Identities = 33/112 (29%), Positives = 46/112 (41%), Gaps = 15/112 (13%) Frame = +3 Query: 141 RLEVLLE*G--HEGIDAAVAEVGRDEEEHPLRGEVGRHEVARAPRAEVQ----------- 281 RLE+L E H G +A V + L+ E G H V R P E Q Sbjct: 147 RLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQRVPETESQGRVHTSACTVA 206 Query: 282 -LVERERQPAVHLHVRALRVLAHGAPREPLLLGGAGAREVHE-GLEVRAVHL 431 L E + Q A+ ++ LRV + A GAG + V++ +R HL Sbjct: 207 VLPEPDEQAAIEINPADLRVDTYRA-------SGAGGQHVNKTDSAIRITHL 251
>SYD_SYNJB (Q2JMA8) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA| ligase) (AspRS) Length = 601 Score = 31.2 bits (69), Expect = 1.4 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 5/91 (5%) Frame = +3 Query: 174 GIDAAVAEVGRDEEEHPLRGEVGRHEVARAPRAEVQLVERERQP-----AVHLHVRALRV 338 GI VA+ + + +PL GEV V R Q P V ++ L V Sbjct: 51 GIVQLVADPQKTPQSYPLAGEVRNEYVVRVTGTVQQRPPDSFNPRLATGEVEIYAEQLEV 110 Query: 339 LAHGAPREPLLLGGAGAREVHEGLEVRAVHL 431 L+ + P + G A EV E + +R +L Sbjct: 111 LSPVGKQLPFSVSGEEAEEVREEIRLRYRYL 141
>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)| Length = 474 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 2/70 (2%) Frame = -2 Query: 338 DAQCPDVEVDSWLTFPFYELNFGTGSPSYFM--PAYFPTEGMLFLVPSNFGDGSVDAFVP 165 D + + + SW YE++FG G P + P P + F+ + G+G ++ + Sbjct: 396 DVEVINFWISSWCRMGLYEIDFGWGKPIWVTVDPNIKPNKNCFFMNDTKCGEG-IEVWAS 454 Query: 164 LFQENLQAFK 135 ++++ F+ Sbjct: 455 FLEDDMAKFE 464
>RF1_PSEAE (P42806) Peptide chain release factor 1 (RF-1)| Length = 360 Score = 30.4 bits (67), Expect = 2.4 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 13/101 (12%) Frame = +3 Query: 168 HEGIDAAVAEVGRDEEEHPLRGEVGRHEVARAPRAEVQ------------LVERERQPAV 311 H G +A V D L+ E G H V R P E Q L E + Q A+ Sbjct: 158 HGGYKEVIARVEGDNVYAKLKFESGAHRVQRVPETESQGRIHTSACTVAVLPEPDEQAAI 217 Query: 312 HLHVRALRVLAHGAPREPLLLGGAGAREVHE-GLEVRAVHL 431 ++ LRV + + GAG + V++ VR H+ Sbjct: 218 EINPADLRVDTYRS-------SGAGGQHVNKTDSAVRITHI 251
>MURG_XANCP (Q8PCK0) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 427 Score = 30.4 bits (67), Expect = 2.4 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +3 Query: 297 RQPAVHLHVRALRVLAHGAPREPLLLGGA-GAREVHEGLEVRAVHLGHLVVD 449 R+ L A R++ G P L+LGG+ GAR ++ + LGH VD Sbjct: 177 REEIAALPAPATRLVGRGGPVRLLVLGGSQGARALNNAVPAALAALGHPAVD 228
>MURG_XANC8 (Q4UQX0) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 427 Score = 30.4 bits (67), Expect = 2.4 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%) Frame = +3 Query: 297 RQPAVHLHVRALRVLAHGAPREPLLLGGA-GAREVHEGLEVRAVHLGHLVVD 449 R+ L A R++ G P L+LGG+ GAR ++ + LGH VD Sbjct: 177 REEIAALPAPATRLVGRGGPVRLLVLGGSQGARALNNAVPAALAALGHPAVD 228
>SPL7_ARATH (Q8S9G8) Squamosa promoter-binding-like protein 7| Length = 801 Score = 30.4 bits (67), Expect = 2.4 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Frame = -2 Query: 290 FYELNFGTGSPSYFMPAYFPTE---GMLFLVPSNFGDGSVDAFVPLFQENLQA 141 FY++N PS F PA+ E G+ +P GD +V + + L ++ A Sbjct: 495 FYKINIVNSDPSLFGPAFVEVENESGLSNFIPLIIGDAAVCSEMKLIEQKFNA 547
>Y388_MYCLE (Q49721) Hypothetical protein ML0388| Length = 375 Score = 30.0 bits (66), Expect = 3.1 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 3/69 (4%) Frame = +3 Query: 195 EVGRDEEEHPLRGE--VGRHEVARAPRAE-VQLVERERQPAVHLHVRALRVLAHGAPREP 365 E+GR L GE +GRH A A+ ++ E+E +PA + L H AP P Sbjct: 64 ELGRLGGLGVLNGEGLIGRHADVGAKVAQLIEAAEKEPEPATAV---CLLQELHAAPLNP 120 Query: 366 LLLGGAGAR 392 LLG A AR Sbjct: 121 DLLGSAVAR 129
>AF17_HUMAN (P55198) Protein AF-17| Length = 1093 Score = 30.0 bits (66), Expect = 3.1 Identities = 20/62 (32%), Positives = 33/62 (53%) Frame = +1 Query: 259 GLPVPKFSS*NGNVSQLSTSTSGHCASLHTALRASPSFSAAPEHAKSTKDWKYAPSTLAT 438 G V F+S + + S S+S+ G ++L++SP FSA P+ + +D KY+ T Sbjct: 318 GKGVSSFTSASSSSSSSSSSSGGPFQPAVSSLQSSPDFSAFPKLEQPEED-KYSKPTAPA 376 Query: 439 SS 444 S Sbjct: 377 PS 378
>NAS37_CAEEL (Q93243) Zinc metalloproteinase nas-37 precursor (EC 3.4.24.21)| (Nematode astacin 37) Length = 765 Score = 29.6 bits (65), Expect = 4.1 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 10/63 (15%) Frame = +1 Query: 307 LSTSTSGHCASLHTALRASPSFSAAPEH----------AKSTKDWKYAPSTLATSSWITW 456 LS S+S +L ASP +A EH + T AP T + S+W W Sbjct: 526 LSPSSSSASPALLLPSDASPQRPSAQEHDLSQLSQNALTRPTPTTTVAPDTASWSAWGEW 585 Query: 457 AAC 465 +AC Sbjct: 586 SAC 588
>TKN1_RAT (P06767) Protachykinin 1 precursor (PPT) [Contains: Substance P;| Neurokinin A (NKA) (Substance K) (Neuromedin L); Neuropeptide K (NPK); Neuropeptide gamma; C-terminal flanking peptide] Length = 130 Score = 29.3 bits (64), Expect = 5.3 Identities = 9/28 (32%), Positives = 18/28 (64%) Frame = -3 Query: 118 WSRWPNCESVEEAVRRALVHLIERVAEK 35 WS W + + ++EA+ HL++R+A + Sbjct: 31 WSDWSDSDQIKEAMPEPFEHLLQRIARR 58
>TKN1_MOUSE (P41539) Protachykinin 1 precursor (PPT) [Contains: Substance P;| Neurokinin A (NKA) (Substance K) (Neuromedin L); Neuropeptide K (NPK); Neuropeptide gamma; C-terminal flanking peptide] Length = 130 Score = 29.3 bits (64), Expect = 5.3 Identities = 9/28 (32%), Positives = 18/28 (64%) Frame = -3 Query: 118 WSRWPNCESVEEAVRRALVHLIERVAEK 35 WS W + + ++EA+ HL++R+A + Sbjct: 31 WSDWSDSDQIKEAMPEPFEHLLQRIARR 58
>SPEE1_PSEAE (Q9X6R0) Spermidine synthase 1 (EC 2.5.1.16) (Putrescine| aminopropyltransferase 1) (SPDSY 1) Length = 286 Score = 29.3 bits (64), Expect = 5.3 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 6/97 (6%) Frame = +3 Query: 177 IDAAVAEVGRDEEEHPLRGEVGRHEVARAPRAEVQLVERERQPAVHLHVRALRVLAHGAP 356 ID + EV R E +H + E R A +Q E + + H + + +LAHGA Sbjct: 18 IDNMLHEV-RTEHQHLVIFENARMGRVMALDGVIQTTEAD-EFIYHEMLTHVPILAHGAA 75 Query: 357 REPLLLGGAGA---REV--HEGLE-VRAVHLGHLVVD 449 R L++GG REV H+ +E + V + VVD Sbjct: 76 RRVLIIGGGDGGMLREVAKHKSVERITMVEIDGTVVD 112
>RHBB_RHIME (Q9Z3R1) L-2,4-diaminobutyrate decarboxylase (EC 4.1.1.-) (DABA| decarboxylase) (DABA-DC) Length = 495 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/50 (36%), Positives = 27/50 (54%) Frame = +3 Query: 78 TASSTDSQFGHLLHGVAAFFERLEVLLE*GHEGIDAAVAEVGRDEEEHPL 227 TA+++ G G+ + L+ L E G GI AA+AE+GR EH + Sbjct: 48 TAAASSLYSGTSFQGLRGLIDDLDPLPEVG-TGIAAALAEIGRPALEHAM 96
>TKN1_MESAU (Q60541) Protachykinin 1 precursor (PPT) [Contains: Substance P;| Neurokinin A (NKA) (Substance K) (Neuromedin L); Neuropeptide K (NPK); Neuropeptide gamma; C-terminal flanking peptide] Length = 130 Score = 28.5 bits (62), Expect = 9.1 Identities = 8/28 (28%), Positives = 18/28 (64%) Frame = -3 Query: 118 WSRWPNCESVEEAVRRALVHLIERVAEK 35 WS W + + ++EA+ H+++R+A + Sbjct: 31 WSDWSDSDQIKEALPEPFEHILQRIARR 58
>SPEE_AERPE (Q9YE02) Probable spermidine synthase (EC 2.5.1.16) (Putrescine| aminopropyltransferase) (SPDSY) Length = 306 Score = 28.5 bits (62), Expect = 9.1 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +3 Query: 336 VLAHGAPREPLLLGGAGAREVHEGLEVRAVHLGHLV 443 ++ HG+PR+ L+LGG + E L+ R+V +V Sbjct: 73 MILHGSPRKVLILGGGEGATLREVLKHRSVEKAVMV 108
>AZI1_MOUSE (Q62036) 5-azacytidine-induced protein 1 (Pre-acrosome localization| protein 1) Length = 1060 Score = 28.5 bits (62), Expect = 9.1 Identities = 25/95 (26%), Positives = 36/95 (37%) Frame = +3 Query: 183 AAVAEVGRDEEEHPLRGEVGRHEVARAPRAEVQLVERERQPAVHLHVRALRVLAHGAPRE 362 A++A+V R E L + + AE+Q ++ VH V+ A Sbjct: 971 ASLAQVVRQEFAEQLAASQEETQRVKVELAELQARQQVELDEVHRRVKTALARKEAAVNS 1030 Query: 363 PLLLGGAGAREVHEGLEVRAVHLGHLVVDHLGSVL 467 R+ HE RA HL L+ H GS L Sbjct: 1031 --------LRKQHEAAVKRADHLEELLEQHKGSSL 1057 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,256,591 Number of Sequences: 219361 Number of extensions: 1250741 Number of successful extensions: 4347 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 4214 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4342 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
