ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart18c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 49 4e-06
2FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 34 0.095
3APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 28 4.0
4APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 28 6.8
5ANKK1_HUMAN (Q8NFD2) Ankyrin repeat and protein kinase domain-co... 27 8.9

>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 21/36 (58%), Positives = 25/36 (69%)
 Frame = -2

Query: 394 CSDSTEYVNWDGIHYTEAANFHVTSQILTGKYSDPP 287
           C+  +  VNWDG HYTEAAN +   QI TG +SDPP
Sbjct: 337 CACPSVRVNWDGAHYTEAANEYFFDQISTGAFSDPP 372



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 400 KGCSDSTEYVNWDGIHYTEAANFHVTSQILTG 305
           K C +  + V WDG+H+T+AAN  +  +I  G
Sbjct: 333 KPCDEPDKAVVWDGVHFTQAANKFIFDKIAPG 364



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/35 (31%), Positives = 23/35 (65%)
 Frame = -2

Query: 403 AKGCSDSTEYVNWDGIHYTEAANFHVTSQILTGKY 299
           +K C +++ Y+ WDG+H T+ A +   +++L  +Y
Sbjct: 495 SKICPNTSSYLFWDGVHPTQRA-YKTINKVLIKEY 528



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>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 11/34 (32%), Positives = 23/34 (67%)
 Frame = -2

Query: 400 KGCSDSTEYVNWDGIHYTEAANFHVTSQILTGKY 299
           K  S+++ Y+ WDG+H ++ A + ++++ L  KY
Sbjct: 413 KNMSNASSYLFWDGLHPSQRA-YEISNRKLVKKY 445



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>ANKK1_HUMAN (Q8NFD2) Ankyrin repeat and protein kinase domain-containing|
           protein 1 (EC 2.7.11.1) (Protein kinase PKK2) (X-kinase)
           (SgK288)
          Length = 765

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = -2

Query: 394 CSDSTEYVNWDGIHYTEAANFHVTSQILTGKYSDP 290
           C D+ E   W  +H     NF   +++L  + +DP
Sbjct: 453 CVDAQEREGWTPLHLAAQNNFENVARLLVSRQADP 487


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,014,578
Number of Sequences: 219361
Number of extensions: 1267502
Number of successful extensions: 2436
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2436
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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