ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart18c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APOL1_HUMAN (O14791) Apolipoprotein-L1 precursor (Apolipoprotein... 32 0.65

>APOL1_HUMAN (O14791) Apolipoprotein-L1 precursor (Apolipoprotein L-I)|
           (Apolipoprotein L) (ApoL-I) (Apo-L) (ApoL)
          Length = 398

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = +1

Query: 100 IQAFRRAHSILRLRDHTTTAR--ATDPTNKEQGLQTERSTYPSVL 228
           I+A RRA + L+   H + +R   T+P + E G Q ER   PS+L
Sbjct: 283 IRALRRARANLQSVPHASASRPRVTEPISAESGEQVERVNEPSIL 327


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,911,322
Number of Sequences: 219361
Number of extensions: 558403
Number of successful extensions: 1632
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1631
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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