ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart18c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF174004.1|AF174004 Triticum aestivum alternative oxidase mRN... 585 e-164
2dbj|AB078882.1| Triticum aestivum mRNA for alternative oxidase, ... 422 e-115
3dbj|AK064040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 4e-72
4dbj|AB007452.1| Oryza sativa mRNA for alternative oxidase, compl... 280 4e-72
5dbj|AB004864.1| Oryza sativa (japonica cultivar-group) AOX1a mRN... 280 4e-72
6ref|XM_473757.1| Oryza sativa (japonica cultivar-group), predic... 276 7e-71
7gb|AY644465.1| Saccharum officinarum mitochondrial alternative o... 244 2e-61
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 238 1e-59
9dbj|AB004813.1| Oryza sativa (japonica cultivar-group) AOX1b and... 238 1e-59
10emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4,... 238 1e-59
11gb|AY059647.1| Zea mays alternative oxidase AOX2 precursor (Aox2... 232 9e-58
12gb|AY108791.1| Zea mays PCO108471 mRNA sequence 232 9e-58
13gb|AY485264.1| Zea mays alternative oxidase 1a (Aox1a) gene, com... 206 5e-50
14gb|AY644466.1| Saccharum officinarum mitochondrial alternative o... 178 1e-41
15dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
16dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic D... 170 3e-39
17gb|AY644468.1| Saccharum officinarum mitochondrial alternative o... 168 1e-38
18gb|AY059648.1| Zea mays alternative oxidase AOX3 precursor (Aox3... 165 2e-37
19dbj|AB078883.1| Triticum aestivum mRNA for alternative oxidase, ... 165 2e-37
20ref|XM_473758.1| Oryza sativa (japonica cultivar-group), predic... 155 2e-34
21dbj|AK107376.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 2e-34
22dbj|AB004865.1| Oryza sativa (japonica cultivar-group) AOX1b mRN... 155 2e-34
23ref|XM_467319.1| Oryza sativa (japonica cultivar-group), mRNA 153 7e-34
24dbj|AB074005.1| Oryza sativa (japonica cultivar-group) mitochond... 153 7e-34
25dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
26dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
27dbj|AB074004.1| Oryza sativa (japonica cultivar-group) mitochond... 151 3e-33
28gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
29gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome... 135 2e-28
30dbj|AB097428.1| Oryza sativa (japonica cultivar-group) transposo... 135 2e-28
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
32dbj|AB189673.1| Dracunculus vulgaris DvAOX mRNA for alternative ... 135 2e-28
33gb|AF040566.1|AF040566 Zea mays alternative oxidase (Aox) gene, ... 133 6e-28
34ref|XM_473445.1| Oryza sativa (japonica cultivar-group), predic... 129 1e-26
35emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4,... 127 4e-26
36dbj|AB097431.1| Oryza sativa (japonica cultivar-group) transposo... 127 4e-26
37gb|AY644467.1| Saccharum officinarum mitochondrial alternative o... 125 1e-25
38dbj|AB097429.1| Oryza sativa (japonica cultivar-group) transposo... 123 6e-25
39dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
40dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic D... 123 6e-25
41ref|NM_194839.1| Oryza sativa (japonica cultivar-group) putative... 117 4e-23
42gb|AY059646.1| Zea mays alternative oxidase AOX1 precursor (Aox1... 115 1e-22
43dbj|AB097430.1| Oryza sativa (japonica cultivar-group) transposo... 113 6e-22
44gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, c... 113 6e-22
45dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 113 6e-22
46gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 113 6e-22
47gb|M60330.1|SURAOX1A S.guttatum aox1 mRNA encoding an alternativ... 101 2e-18
48emb|Z15117.1|SGAOX1G S.guttatum aox1 gene for salicylic acid-ind... 86 1e-13
49dbj|AB183695.1| Symplocarpus foetidus SfAOX mRNA for skunk cabba... 72 2e-09
50dbj|AB190213.1| Philodendron bipinnatifidum PsAOX mRNA for alter... 72 2e-09
51gb|AY422689.1| Nicotiana attenuata tissue-type shoot mitochondri... 52 0.002
52gb|DQ100439.1| Vigna unguiculata mitochondrial alternative oxida... 48 0.028
53emb|AJ421015.1|VUN421015 Vigna unguiculata mRNA for putative alt... 48 0.028
54gb|AY422688.1| Nicotiana attenuata tissue-type shoot mitochondri... 46 0.11
55gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
56gb|DQ100441.1| Vigna unguiculata mitochondrial alternative oxida... 44 0.44
57gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 44 0.44
58gb|S71335.1| Aox1=alternative oxidase {alternative pathway} [Nic... 44 0.44
59emb|AJ538951.1|NTA538951 Nicotiana tabacum cDNA-AFLP-fragment BT... 44 0.44
60emb|AJ718098.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-24-60... 44 0.44
61gb|DQ100440.1| Vigna unguiculata mitochondrial alternative oxida... 42 1.7
62gb|AE004896.1| Pseudomonas aeruginosa PAO1, section 457 of 529 o... 42 1.7
63emb|AJ489270.1|CSA489270 Crocus sativus partial mRNA for alterna... 42 1.7
64gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 6.8
65ref|XM_644660.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.8
66emb|CR407594.22| Zebrafish DNA sequence from clone DKEY-122C11 i... 40 6.8
67gb|AY244554.1| Cucumis sativus alternative oxidase gene, partial... 40 6.8
68gb|CP000088.1| Thermobifida fusca YX, complete genome 40 6.8
69emb|AJ250581.1|STE250581 Streptomyces tendae nikkomycin biosynth... 40 6.8
70emb|AJ250199.1|STE250199 Streptomyces tendae nikkomycin biosynth... 40 6.8
71gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, compl... 40 6.8
72gb|AY258276.2| Cucumis sativus MSC16 mitochondrial alternative o... 40 6.8
73gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence 40 6.8
74gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 6.8
75emb|X79768.1|NTSR1AOX N.tabacum (SR1) aox mRNA 40 6.8
76emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 6.8
77gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.8
78dbj|AB055060.1| Catharanthus roseus gene for alternative oxidase... 40 6.8 
>gb|AF174004.1|AF174004 Triticum aestivum alternative oxidase mRNA, partial cds; nuclear gene
            for mitochondrial product
          Length = 1100

 Score =  585 bits (295), Expect = e-164
 Identities = 416/450 (92%), Gaps = 16/450 (3%)
 Strand = Plus / Minus

                                                                        
Query: 64   tggcgtaagccaaataggttcatctttga--gcgaaatggtggttcaacaatatcctag- 120
            ||||||| |||||||||||||||||| ||  |||||| ||||||||||||||||||||  
Sbjct: 1069 tggcgtacgccaaataggttcatcttagatagcgaaacggtggttcaacaatatcctaat 1010

                                                                        
Query: 121  atacgtaactgacaagcacactgcttatttctcagtactcgatagttaccaaaggagcaa 180
            ||||| ||||||||||||||||| |||||||||||||||  |||||||||||||||||||
Sbjct: 1009 atacgcaactgacaagcacactgattatttctcagtactgaatagttaccaaaggagcaa 950

                                                                        
Query: 181  caattgcgacatcctatacagctaaaga--gccctcatttcctcggaagccttc-aaaac 237
            ||||||| ||||||||||||||||||||  || ||||||||||| |   ||||| |||||
Sbjct: 949  caattgcaacatcctatacagctaaagatagctctcatttcctctg---ccttccaaaac 893

                                                                        
Query: 238  gaaacactcatttgcttggtagtagtag------cgatgcaaaattcagcagaagacggc 291
            |||||||||||||||||||| |||||||      |||||||||| ||||||||| |||||
Sbjct: 892  gaaacactcatttgcttggtggtagtagtagcagcgatgcaaaactcagcagaacacggc 833

                                                                        
Query: 292  caagcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagta 351
            || |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 832  ca-gcctcagtggtatccgatcggcgctggggtggccttcagctgcataccctggtagta 774

                                                                        
Query: 352  cacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggt 411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  cacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggt 714

                                                                        
Query: 412  gaccacgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccgg 471
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 713  gaccacgtccttgagggtggcgttggcagggaggcgccagtagtcgatggcgatggccgg 654

                                          
Query: 472  ggcagggacgttgtcgatcttgccgtcgtc 501
            ||| ||||||||||||||||||||||||||
Sbjct: 653  ggcggggacgttgtcgatcttgccgtcgtc 624
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>dbj|AB078882.1| Triticum aestivum mRNA for alternative oxidase, complete cds
          Length = 1119

 Score =  422 bits (213), Expect = e-115
 Identities = 264/281 (93%), Gaps = 10/281 (3%)
 Strand = Plus / Minus

                                                                        
Query: 232  caaaacgaaacactcatttgcttggt---------agtagtagcgatgcaaaattcagca 282
            ||||||||||||||||||||||||||         |||||||||| ||||||||||||||
Sbjct: 1096 caaaacgaaacactcatttgcttggtggtagtagcagtagtagcgttgcaaaattcagca 1037

                                                                        
Query: 283  gaagacggccaagcctcagtggtatccgatcggcgccggggtggccttcagctccatacc 342
            ||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1036 gaacacggcca-gcctcagtggtatccgatcggcgccggggtggccttcagctgcatacc 978

                                                                        
Query: 343  ctggtagtacacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977  ctggtagtacacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 918

                                                                        
Query: 403  caccacggtgaccacgtccttgagggtggcgttggccgggaggcgccagtagtcgatggc 462
             ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 917  gaccacggtgaccacgtccttgagggtggcgttggcagggaggcgccagtagtcgatggc 858

                                                     
Query: 463  gatggccggggcagggacgttgtcgatcttgccgtcgtcga 503
            |||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 857  gatggcaggggcggggacgttgtcgatcttgccgtcgtcga 817
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>dbj|AK064040.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-C12, full
            insert sequence
          Length = 1471

 Score =  280 bits (141), Expect = 4e-72
 Identities = 186/201 (92%)
 Strand = Plus / Minus

                                                                        
Query: 296  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 355
            |||||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |
Sbjct: 1104 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatg 1045

                                                                        
Query: 356  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 415
            |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 1044 tccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacg 985

                                                                        
Query: 416  acgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggca 475
            ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 984  acgtccttgagcgtggcgttggcggggaggcgccagtagtcgatggcgatggccggggca 925

                                 
Query: 476  gggacgttgtcgatcttgccg 496
            |||||||||||||||||||||
Sbjct: 924  gggacgttgtcgatcttgccg 904



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 191  atcctatacagctaaagagccctcattt 218
            |||| ||||||||||||||| |||||||
Sbjct: 1207 atccgatacagctaaagagctctcattt 1180
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>dbj|AB007452.1| Oryza sativa mRNA for alternative oxidase, complete cds
          Length = 1256

 Score =  280 bits (141), Expect = 4e-72
 Identities = 186/201 (92%)
 Strand = Plus / Minus

                                                                        
Query: 296  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 355
            |||||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |
Sbjct: 1085 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatg 1026

                                                                        
Query: 356  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 415
            |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 1025 tccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacg 966

                                                                        
Query: 416  acgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggca 475
            ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 965  acgtccttgagcgtggcgttggcggggaggcgccagtagtcgatggcgatggccggggca 906

                                 
Query: 476  gggacgttgtcgatcttgccg 496
            |||||||||||||||||||||
Sbjct: 905  gggacgttgtcgatcttgccg 885



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 191  atcctatacagctaaagagccctcattt 218
            |||| ||||||||||||||| |||||||
Sbjct: 1188 atccgatacagctaaagagctctcattt 1161
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>dbj|AB004864.1| Oryza sativa (japonica cultivar-group) AOX1a mRNA for alternative
            oxidase, complete cds
          Length = 1459

 Score =  280 bits (141), Expect = 4e-72
 Identities = 186/201 (92%)
 Strand = Plus / Minus

                                                                        
Query: 296  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 355
            |||||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |
Sbjct: 1092 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatg 1033

                                                                        
Query: 356  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 415
            |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 1032 tccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacg 973

                                                                        
Query: 416  acgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggca 475
            ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 972  acgtccttgagcgtggcgttggcggggaggcgccagtagtcgatggcgatggccggggca 913

                                 
Query: 476  gggacgttgtcgatcttgccg 496
            |||||||||||||||||||||
Sbjct: 912  gggacgttgtcgatcttgccg 892



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 191  atcctatacagctaaagagccctcattt 218
            |||| ||||||||||||||| |||||||
Sbjct: 1195 atccgatacagctaaagagctctcattt 1168
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>ref|XM_473757.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 999

 Score =  276 bits (139), Expect = 7e-71
 Identities = 184/199 (92%)
 Strand = Plus / Minus

                                                                       
Query: 298 tcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtc 357
           |||||| |||||||||||||| |||||   |||||||||||| |||||||| |  | |||
Sbjct: 999 tcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggtaatggatgtc 940

                                                                       
Query: 358 cgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccac 417
           |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 939 cgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacgac 880

                                                                       
Query: 418 gtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcagg 477
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 879 gtccttgagcgtggcgttggcggggaggcgccagtagtcgatggcgatggccggggcagg 820

                              
Query: 478 gacgttgtcgatcttgccg 496
           |||||||||||||||||||
Sbjct: 819 gacgttgtcgatcttgccg 801
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>gb|AY644465.1| Saccharum officinarum mitochondrial alternative oxidase 1 mRNA,
            complete cds; nuclear gene for mitochondrial product
          Length = 1316

 Score =  244 bits (123), Expect = 2e-61
 Identities = 183/203 (90%)
 Strand = Plus / Minus

                                                                        
Query: 294  agcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtaca 353
            ||||||||||||||||||||||||| ||||    |||||||| ||| |||||| | |  |
Sbjct: 1096 agcctcagtggtatccgatcggcgcaggggactgcttcagctgcatgccctggcaatgga 1037

                                                                        
Query: 354  cgtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtga 413
             ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1036 tgtccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtga 977

                                                                        
Query: 414  ccacgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccgggg 473
            | ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 976  cgacgtccttgagcgtggcgttagcggggaggcgccagtagtcgatggcgatggccgggg 917

                                   
Query: 474  cagggacgttgtcgatcttgccg 496
            | |||||||| ||||||||||||
Sbjct: 916  cggggacgttctcgatcttgccg 894
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  238 bits (120), Expect = 1e-59
 Identities = 135/140 (96%)
 Strand = Plus / Plus

                                                                            
Query: 357      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
                ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 30321728 ccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacga 30321787

                                                                            
Query: 417      cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
                |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 30321788 cgtccttgagcgtggcgttggcggggaggcgccagtagtcgatggcgatggccggggcag 30321847

                                    
Query: 477      ggacgttgtcgatcttgccg 496
                ||||||||||||||||||||
Sbjct: 30321848 ggacgttgtcgatcttgccg 30321867



 Score =  151 bits (76), Expect = 3e-33
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                            
Query: 357      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
                |||||||||| ||||||| |||||||||||| |||||||||||||| |  |||||||| |
Sbjct: 30325836 ccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgacga 30325895

                                                                            
Query: 417      cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
                |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| || |
Sbjct: 30325896 cgtccttgagcgtggcgtcggcggggaggcgccagtagtcgatggcgatggccggcgccg 30325955

                                    
Query: 477      ggacgttgtcgatcttgccg 496
                |   ||| ||||||||||||
Sbjct: 30325956 gcgtgttctcgatcttgccg 30325975



 Score =  127 bits (64), Expect = 4e-26
 Identities = 121/140 (86%)
 Strand = Plus / Minus

                                                                            
Query: 357      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
                |||||||||| |||||||||||||||||||| ||||||||||| || || ||   ||| |
Sbjct: 27704187 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcacgaacaacaacgacga 27704128

                                                                            
Query: 417      cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
                |||||||||| ||||||  ||| ||||| |||||||||||||||||||| | ||| || |
Sbjct: 27704127 cgtccttgagcgtggcgccggcggggagccgccagtagtcgatggcgatcggcggcgcgg 27704068

                                    
Query: 477      ggacgttgtcgatcttgccg 496
                ||||||| ||||||||||||
Sbjct: 27704067 ggacgttctcgatcttgccg 27704048



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                     
Query: 296      cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggta 348
                |||||||| |||||||||||||| |||||   |||||||||||| ||||||||
Sbjct: 30321565 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggta 30321617



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 191      atcctatacagctaaagagccctcattt 218
                |||| ||||||||||||||| |||||||
Sbjct: 30321462 atccgatacagctaaagagctctcattt 30321489
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>dbj|AB004813.1| Oryza sativa (japonica cultivar-group) AOX1b and AOX1a genes,
            complete cds
          Length = 7421

 Score =  238 bits (120), Expect = 1e-59
 Identities = 135/140 (96%)
 Strand = Plus / Minus

                                                                        
Query: 357  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
            ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 6561 ccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacga 6502

                                                                        
Query: 417  cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
            |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 6501 cgtccttgagcgtggcgttggcggggaggcgccagtagtcgatggcgatggccggggcag 6442

                                
Query: 477  ggacgttgtcgatcttgccg 496
            ||||||||||||||||||||
Sbjct: 6441 ggacgttgtcgatcttgccg 6422



 Score =  151 bits (76), Expect = 3e-33
 Identities = 124/140 (88%)
 Strand = Plus / Minus

                                                                        
Query: 357  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
            |||||||||| ||||||| |||||||||||| |||||||||||||| |  |||||||| |
Sbjct: 2453 ccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgacga 2394

                                                                        
Query: 417  cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
            |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| || |
Sbjct: 2393 cgtccttgagcgtggcgtcggcggggaggcgccagtagtcgatggcgatggccggcgccg 2334

                                
Query: 477  ggacgttgtcgatcttgccg 496
            |   ||| ||||||||||||
Sbjct: 2333 gcgtgttctcgatcttgccg 2314



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 296  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggta 348
            |||||||| |||||||||||||| |||||   |||||||||||| ||||||||
Sbjct: 6724 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggta 6672



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 191  atcctatacagctaaagagccctcattt 218
            |||| ||||||||||||||| |||||||
Sbjct: 6827 atccgatacagctaaagagctctcattt 6800
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>emb|AL606683.3|OSJN00089 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0083N12,
             complete sequence
          Length = 160989

 Score =  238 bits (120), Expect = 1e-59
 Identities = 135/140 (96%)
 Strand = Plus / Plus

                                                                         
Query: 357   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
             ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 71624 ccgatgcgaagtgattgacgtcgcggtggtgagcctcgtcggcgcgcacgacggtgacga 71683

                                                                         
Query: 417   cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
             |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 71684 cgtccttgagcgtggcgttggcggggaggcgccagtagtcgatggcgatggccggggcag 71743

                                 
Query: 477   ggacgttgtcgatcttgccg 496
             ||||||||||||||||||||
Sbjct: 71744 ggacgttgtcgatcttgccg 71763



 Score =  151 bits (76), Expect = 3e-33
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                         
Query: 357   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
             |||||||||| ||||||| |||||||||||| |||||||||||||| |  |||||||| |
Sbjct: 75732 ccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgacga 75791

                                                                         
Query: 417   cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
             |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| || |
Sbjct: 75792 cgtccttgagcgtggcgtcggcggggaggcgccagtagtcgatggcgatggccggcgccg 75851

                                 
Query: 477   ggacgttgtcgatcttgccg 496
             |   ||| ||||||||||||
Sbjct: 75852 gcgtgttctcgatcttgccg 75871



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                  
Query: 296   cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggta 348
             |||||||| |||||||||||||| |||||   |||||||||||| ||||||||
Sbjct: 71461 cctcagtgatatccgatcggcgcaggggtctgcttcagctccatgccctggta 71513



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 191   atcctatacagctaaagagccctcattt 218
             |||| ||||||||||||||| |||||||
Sbjct: 71358 atccgatacagctaaagagctctcattt 71385
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>gb|AY059647.1| Zea mays alternative oxidase AOX2 precursor (Aox2) mRNA, nuclear gene
            encoding mitochondrial protein, complete cds~~
          Length = 1456

 Score =  232 bits (117), Expect = 9e-58
 Identities = 180/201 (89%)
 Strand = Plus / Minus

                                                                        
Query: 296  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 355
            ||||||||||||||||||||||| ||||    |||||||| ||| |||||| | |  | |
Sbjct: 1099 cctcagtggtatccgatcggcgcaggggactgcttcagctgcattccctggcaatggatg 1040

                                                                        
Query: 356  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 415
            |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 1039 tccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcggacgacggtgact 980

                                                                        
Query: 416  acgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggca 475
            ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| 
Sbjct: 979  acgtccttgagcgtggcgttagcggggaggcgccagtagtcgatggcgatggccggggcg 920

                                 
Query: 476  gggacgttgtcgatcttgccg 496
            |||||||| ||||||||||||
Sbjct: 919  gggacgttctcgatcttgccg 899
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>gb|AY108791.1| Zea mays PCO108471 mRNA sequence
          Length = 1415

 Score =  232 bits (117), Expect = 9e-58
 Identities = 180/201 (89%)
 Strand = Plus / Minus

                                                                        
Query: 296  cctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacg 355
            ||||||||||||||||||||||| ||||    |||||||| ||| |||||| | |  | |
Sbjct: 1113 cctcagtggtatccgatcggcgcaggggactgcttcagctgcattccctggcaatggatg 1054

                                                                        
Query: 356  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 415
            |||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| 
Sbjct: 1053 tccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcggacgacggtgact 994

                                                                        
Query: 416  acgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggca 475
            ||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| 
Sbjct: 993  acgtccttgagcgtggcgttagcggggaggcgccagtagtcgatggcgatggccggggcg 934

                                 
Query: 476  gggacgttgtcgatcttgccg 496
            |||||||| ||||||||||||
Sbjct: 933  gggacgttctcgatcttgccg 913
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>gb|AY485264.1| Zea mays alternative oxidase 1a (Aox1a) gene, complete cds
          Length = 3361

 Score =  206 bits (104), Expect = 5e-50
 Identities = 131/140 (93%)
 Strand = Plus / Minus

                                                                        
Query: 357  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
            ||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| |
Sbjct: 2887 ccgatgcaaagtggttgacgtcgcggtggtgagcctcgtcggcgcggacgacggtgacta 2828

                                                                        
Query: 417  cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
            |||||||||| |||||||| || ||||||||||||||||||||||||||||||||||| |
Sbjct: 2827 cgtccttgagcgtggcgttagcggggaggcgccagtagtcgatggcgatggccggggcgg 2768

                                
Query: 477  ggacgttgtcgatcttgccg 496
            ||||||| ||||||||||||
Sbjct: 2767 ggacgttctcgatcttgccg 2748



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 296  cctcagtggtatccgatcggcgccgggg 323
            ||||||||||||||||||||||| ||||
Sbjct: 3050 cctcagtggtatccgatcggcgcagggg 3023
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>gb|AY644466.1| Saccharum officinarum mitochondrial alternative oxidase 1b mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 989

 Score =  178 bits (90), Expect = 1e-41
 Identities = 165/190 (86%)
 Strand = Plus / Minus

                                                                       
Query: 300 agtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtccg 359
           ||||||| ||||  ||||| || ||| ||||||||| ||| |||||||| |  | |||||
Sbjct: 875 agtggtacccgagaggcgcaggcgtgtccttcagcttcatcccctggtaatgaatgtccg 816

                                                                       
Query: 360 atgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgt 419
           |||||||||||||||| ||||||||||| ||||||||||||||||| | |||||| ||||
Sbjct: 815 atgcgaagtggttgacatcgcggtggtgcgcctcgtcggcgcgcacgatggtgacgacgt 756

                                                                       
Query: 420 ccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcaggga 479
           |||||||  |||||| ||| ||||||||||||||||||||||||||||||||| | ||| 
Sbjct: 755 ccttgagcttggcgtcggcggggaggcgccagtagtcgatggcgatggccgggaccgggg 696

                     
Query: 480 cgttgtcgat 489
            |||||||||
Sbjct: 695 tgttgtcgat 686
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  170 bits (86), Expect = 3e-39
 Identities = 125/138 (90%)
 Strand = Plus / Minus

                                                                            
Query: 366      agtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtccttga 425
                |||||||||||||||||||||| |||||||||||||| || ||  |||| |||||| |||
Sbjct: 12646581 agtggttgacgtcgcggtggtgggcctcgtcggcgcggacgaccatgacgacgtccctga 12646522

                                                                            
Query: 426      gggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcagggacgttgt 485
                ||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||| ||
Sbjct: 12646521 gggtggcgtcggcggggaggcgccagtagtcgatggcgatggcgggggcggggacgtcgt 12646462

                                  
Query: 486      cgatcttgccgtcgtcga 503
                ||||||||||| ||||||
Sbjct: 12646461 cgatcttgccggcgtcga 12646444



 Score =  151 bits (76), Expect = 3e-33
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                            
Query: 357      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
                |||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| |
Sbjct: 28831344 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacga 28831403

                                                                            
Query: 417      cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
                |||||||||| ||||||  ||| |||||||||||||||||||||||||| | ||| || |
Sbjct: 28831404 cgtccttgagcgtggcgccggcggggaggcgccagtagtcgatggcgatcggcggcgcgg 28831463

                                    
Query: 477      ggacgttgtcgatcttgccg 496
                ||||||| ||||||||||||
Sbjct: 28831464 ggacgttctcgatcttgccg 28831483
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>dbj|AP004024.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1134_B09
          Length = 105247

 Score =  170 bits (86), Expect = 3e-39
 Identities = 125/138 (90%)
 Strand = Plus / Minus

                                                                         
Query: 366   agtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtccttga 425
             |||||||||||||||||||||| |||||||||||||| || ||  |||| |||||| |||
Sbjct: 43640 agtggttgacgtcgcggtggtgggcctcgtcggcgcggacgaccatgacgacgtccctga 43581

                                                                         
Query: 426   gggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcagggacgttgt 485
             ||||||||| ||| ||||||||||||||||||||||||||||| ||||| ||||||| ||
Sbjct: 43580 gggtggcgtcggcggggaggcgccagtagtcgatggcgatggcgggggcggggacgtcgt 43521

                               
Query: 486   cgatcttgccgtcgtcga 503
             ||||||||||| ||||||
Sbjct: 43520 cgatcttgccggcgtcga 43503
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>gb|AY644468.1| Saccharum officinarum mitochondrial alternative oxidase 1d mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1108

 Score =  168 bits (85), Expect = 1e-38
 Identities = 109/117 (93%)
 Strand = Plus / Minus

                                                                       
Query: 355 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 414
           |||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 823 gtccgacgcgaagtggttgacgtcgcggtggtgcgcctcgtcggcgcgcacgacggtgac 764

                                                                    
Query: 415 cacgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccgg 471
            |||||||||||  |||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 763 aacgtccttgagcttggcgtcggcggggaggcgccagtagtcgatggcgatggccgg 707
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>gb|AY059648.1| Zea mays alternative oxidase AOX3 precursor (Aox3) mRNA, nuclear gene
            encoding mitochondrial protein, complete cds~~
          Length = 1397

 Score =  165 bits (83), Expect = 2e-37
 Identities = 122/135 (90%)
 Strand = Plus / Minus

                                                                        
Query: 355  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 414
            |||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 1101 gtccgacgcgaagtggttgacgtcgcggtggtgcgcctcgtcggcgcgcacgacggtgac 1042

                                                                        
Query: 415  cacgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggc 474
             |||||||||||  |||||| ||| ||||||||||| |||||||||||||||||||| ||
Sbjct: 1041 gacgtccttgagcttggcgtcggcggggaggcgccaatagtcgatggcgatggccggcgc 982

                           
Query: 475  agggacgttgtcgat 489
             |||  |||||||||
Sbjct: 981  cggggtgttgtcgat 967
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>dbj|AB078883.1| Triticum aestivum mRNA for alternative oxidase, complete cds
          Length = 1136

 Score =  165 bits (83), Expect = 2e-37
 Identities = 122/135 (90%)
 Strand = Plus / Minus

                                                                        
Query: 362  gcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtcc 421
            |||||||||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 1048 gcgaagtggttgacatcgcggtggtgcgcctcgtcggcgcgcacgacggtgacgacgtcc 989

                                                                        
Query: 422  ttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcagggacg 481
            |||||  |||||| ||| |||||||||||||||||||||||||||  |||||| ||||||
Sbjct: 988  ttgagcctggcgtcggcggggaggcgccagtagtcgatggcgatgcgcggggcggggacg 929

                           
Query: 482  ttgtcgatcttgccg 496
            || |||||| |||||
Sbjct: 928  ttctcgatcctgccg 914
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>ref|XM_473758.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1008

 Score =  155 bits (78), Expect = 2e-34
 Identities = 126/142 (88%)
 Strand = Plus / Minus

                                                                       
Query: 355 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 414
           |||||||||||| ||||||| |||||||||||| |||||||||||||| |  ||||||||
Sbjct: 951 gtccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgac 892

                                                                       
Query: 415 cacgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggc 474
            ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| ||
Sbjct: 891 gacgtccttgagcgtggcgtcggcggggaggcgccagtagtcgatggcgatggccggcgc 832

                                 
Query: 475 agggacgttgtcgatcttgccg 496
            ||   ||| ||||||||||||
Sbjct: 831 cggcgtgttctcgatcttgccg 810
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>dbj|AK107376.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-B09, full
            insert sequence
          Length = 1360

 Score =  155 bits (78), Expect = 2e-34
 Identities = 126/142 (88%)
 Strand = Plus / Minus

                                                                        
Query: 355  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 414
            |||||||||||| ||||||| |||||||||||| |||||||||||||| |  ||||||||
Sbjct: 1098 gtccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgac 1039

                                                                        
Query: 415  cacgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggc 474
             ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| ||
Sbjct: 1038 gacgtccttgagcgtggcgtcggcggggaggcgccagtagtcgatggcgatggccggcgc 979

                                  
Query: 475  agggacgttgtcgatcttgccg 496
             ||   ||| ||||||||||||
Sbjct: 978  cggcgtgttctcgatcttgccg 957
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>dbj|AB004865.1| Oryza sativa (japonica cultivar-group) AOX1b mRNA for alternative
            oxidase, complete cds
          Length = 1343

 Score =  155 bits (78), Expect = 2e-34
 Identities = 126/142 (88%)
 Strand = Plus / Minus

                                                                        
Query: 355  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 414
            |||||||||||| ||||||| |||||||||||| |||||||||||||| |  ||||||||
Sbjct: 1083 gtccgatgcgaaatggttgaggtcgcggtggtgcgcctcgtcggcgcggatgacggtgac 1024

                                                                        
Query: 415  cacgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggc 474
             ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||| ||
Sbjct: 1023 gacgtccttgagcgtggcgtcggcggggaggcgccagtagtcgatggcgatggccggcgc 964

                                  
Query: 475  agggacgttgtcgatcttgccg 496
             ||   ||| ||||||||||||
Sbjct: 963  cggcgtgttctcgatcttgccg 942
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>ref|XM_467319.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1038

 Score =  153 bits (77), Expect = 7e-34
 Identities = 125/141 (88%)
 Strand = Plus / Minus

                                                                       
Query: 356 tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 415
           ||||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| 
Sbjct: 980 tccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacg 921

                                                                       
Query: 416 acgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggca 475
           ||||||||||| ||||||  ||| |||||||||||||||||||||||||| | ||| || 
Sbjct: 920 acgtccttgagcgtggcgccggcggggaggcgccagtagtcgatggcgatcggcggcgcg 861

                                
Query: 476 gggacgttgtcgatcttgccg 496
           |||||||| ||||||||||||
Sbjct: 860 gggacgttctcgatcttgccg 840
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>dbj|AB074005.1| Oryza sativa (japonica cultivar-group) mitochondrial AOX1c mRNA for
            alternative oxidase 1c, complete cds
          Length = 1088

 Score =  153 bits (77), Expect = 7e-34
 Identities = 125/141 (88%)
 Strand = Plus / Minus

                                                                        
Query: 356  tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 415
            ||||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| 
Sbjct: 1013 tccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacg 954

                                                                        
Query: 416  acgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggca 475
            ||||||||||| ||||||  ||| |||||||||||||||||||||||||| | ||| || 
Sbjct: 953  acgtccttgagcgtggcgccggcggggaggcgccagtagtcgatggcgatcggcggcgcg 894

                                 
Query: 476  gggacgttgtcgatcttgccg 496
            |||||||| ||||||||||||
Sbjct: 893  gggacgttctcgatcttgccg 873
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>dbj|AP004778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0459B01
          Length = 163087

 Score =  151 bits (76), Expect = 3e-33
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                          
Query: 357    ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
              |||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| |
Sbjct: 147917 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacga 147976

                                                                          
Query: 417    cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
              |||||||||| ||||||  ||| |||||||||||||||||||||||||| | ||| || |
Sbjct: 147977 cgtccttgagcgtggcgccggcggggaggcgccagtagtcgatggcgatcggcggcgcgg 148036

                                  
Query: 477    ggacgttgtcgatcttgccg 496
              ||||||| ||||||||||||
Sbjct: 148037 ggacgttctcgatcttgccg 148056
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>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1111_E07
          Length = 123613

 Score =  151 bits (76), Expect = 3e-33
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                         
Query: 357   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
             |||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| |
Sbjct: 24036 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacga 24095

                                                                         
Query: 417   cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
             |||||||||| ||||||  ||| |||||||||||||||||||||||||| | ||| || |
Sbjct: 24096 cgtccttgagcgtggcgccggcggggaggcgccagtagtcgatggcgatcggcggcgcgg 24155

                                 
Query: 477   ggacgttgtcgatcttgccg 496
             ||||||| ||||||||||||
Sbjct: 24156 ggacgttctcgatcttgccg 24175
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>dbj|AB074004.1| Oryza sativa (japonica cultivar-group) mitochondrial AOX1c gene for
            alternative oxidase 1c, complete cds
          Length = 2674

 Score =  151 bits (76), Expect = 3e-33
 Identities = 124/140 (88%)
 Strand = Plus / Minus

                                                                        
Query: 357  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
            |||| |||||||||||||||||||||||||| |||||||||||||| || |||  ||| |
Sbjct: 1753 ccgacgcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacgacgacga 1694

                                                                        
Query: 417  cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
            |||||||||| ||||||  ||| |||||||||||||||||||||||||| | ||| || |
Sbjct: 1693 cgtccttgagcgtggcgccggcggggaggcgccagtagtcgatggcgatcggcggcgcgg 1634

                                
Query: 477  ggacgttgtcgatcttgccg 496
            ||||||| ||||||||||||
Sbjct: 1633 ggacgttctcgatcttgccg 1614
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>gb|AC135423.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0015C02,
            complete sequence
          Length = 147407

 Score =  135 bits (68), Expect = 2e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 357  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
            |||||||||| |||||||||||||||||||| ||||||| |||||| || |||  ||| |
Sbjct: 5229 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcggacgacgacgacga 5170

                                                                        
Query: 417  cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
            |||||||||| ||||||  ||| ||||| |||||||||||||||||||| | ||  ||||
Sbjct: 5169 cgtccttgagcgtggcgccggcggggagccgccagtagtcgatggcgatcggcgacgcag 5110

                                
Query: 477  ggacgttgtcgatcttgccg 496
            ||||||| ||||||||||||
Sbjct: 5109 ggacgttctcgatcttgccg 5090
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>gb|AC121364.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0052E20, complete sequence
          Length = 162434

 Score =  135 bits (68), Expect = 2e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                         
Query: 357   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
             |||||||||| |||||||||||||||||||| ||||||| |||||| || |||  ||| |
Sbjct: 46762 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcggacgacgacgacga 46703

                                                                         
Query: 417   cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
             |||||||||| ||||||  ||| ||||| |||||||||||||||||||| | ||  ||||
Sbjct: 46702 cgtccttgagcgtggcgccggcggggagccgccagtagtcgatggcgatcggcgacgcag 46643

                                 
Query: 477   ggacgttgtcgatcttgccg 496
             ||||||| ||||||||||||
Sbjct: 46642 ggacgttctcgatcttgccg 46623
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>dbj|AB097428.1| Oryza sativa (japonica cultivar-group) transposon AnacA1(AOX) DNA,
            complete sequence
          Length = 2105

 Score =  135 bits (68), Expect = 2e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                        
Query: 357  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
            |||||||||| |||||||||||||||||||| ||||||| |||||| || |||  ||| |
Sbjct: 1129 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcggacgacgacgacga 1070

                                                                        
Query: 417  cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
            |||||||||| ||||||  ||| ||||| |||||||||||||||||||| | ||  ||||
Sbjct: 1069 cgtccttgagcgtggcgccggcggggagccgccagtagtcgatggcgatcggcgacgcag 1010

                                
Query: 477  ggacgttgtcgatcttgccg 496
            ||||||| ||||||||||||
Sbjct: 1009 ggacgttctcgatcttgccg 990
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  135 bits (68), Expect = 2e-28
 Identities = 122/140 (87%)
 Strand = Plus / Minus

                                                                            
Query: 357      ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
                |||||||||| |||||||||||||||||||| ||||||| |||||| || |||  ||| |
Sbjct: 22942749 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgttggcgcggacgacgacgacga 22942690

                                                                            
Query: 417      cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
                |||||||||| ||||||  ||| ||||| |||||||||||||||||||| | ||  ||||
Sbjct: 22942689 cgtccttgagcgtggcgccggcggggagccgccagtagtcgatggcgatcggcgacgcag 22942630

                                    
Query: 477      ggacgttgtcgatcttgccg 496
                ||||||| ||||||||||||
Sbjct: 22942629 ggacgttctcgatcttgccg 22942610



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 376      gtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtcct 422
                ||||| |||||| |||||||||||||| |  |||||||| |||||||
Sbjct: 18430137 gtcgcagtggtgcgcctcgtcggcgcggatgacggtgacgacgtcct 18430183
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>dbj|AB189673.1| Dracunculus vulgaris DvAOX mRNA for alternative oxidase, complete cds
          Length = 1372

 Score =  135 bits (68), Expect = 2e-28
 Identities = 152/180 (84%)
 Strand = Plus / Minus

                                                                        
Query: 295  gcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacac 354
            |||||||||||| |||| ||||||||| || | ||||||||| | |||||||||||  ||
Sbjct: 1153 gcctcagtggtacccgagcggcgccggcgtcgtcttcagctcaagaccctggtagtggac 1094

                                                                        
Query: 355  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 414
            ||| || |||||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct: 1093 gtcggaggcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacggtgac 1034

                                                                        
Query: 415  cacgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggc 474
             |||||    ||||||| |     ||| || ||||||||||||| |||||||||||||||
Sbjct: 1033 gacgtcgcgcagggtggagccctgcggcagccgccagtagtcgagggcgatggccggggc 974
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>gb|AF040566.1|AF040566 Zea mays alternative oxidase (Aox) gene, partial cds
          Length = 447

 Score =  133 bits (67), Expect = 6e-28
 Identities = 105/115 (91%), Gaps = 2/115 (1%)
 Strand = Plus / Minus

                                                                       
Query: 383 tggtgagcctcgtcggcgcgcaccacggtgaccacgtccttgagggtggcgttggccggg 442
           |||||||| ||||||||||| || |||||||| ||||||||||| |||||||| || |||
Sbjct: 446 tggtgagcttcgtcggcgcggacgacggtgactacgtccttgagcgtggcgttagcgggg 387

                                                                  
Query: 443 aggcgccagtagtcgatggcgatggccggggcagggacg-ttgtcgatcttgccg 496
           |||||||||||||||||||||||||||||||| |||||| || ||||||||||||
Sbjct: 386 aggcgccagtagtcgatggcgatggccggggc-gggacgtttttcgatcttgccg 333
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>ref|XM_473445.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 378

 Score =  129 bits (65), Expect = 1e-26
 Identities = 122/141 (86%)
 Strand = Plus / Minus

                                                                       
Query: 356 tccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacc 415
           ||||||||||| |||||||||||||||||||| ||||||||||| || || ||   ||| 
Sbjct: 320 tccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcacgaacaacaacgacg 261

                                                                       
Query: 416 acgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggca 475
           ||||||||||| ||||||  ||| ||||| |||||||||||||||||||| | ||| || 
Sbjct: 260 acgtccttgagcgtggcgccggcggggagccgccagtagtcgatggcgatcggcggcgcg 201

                                
Query: 476 gggacgttgtcgatcttgccg 496
           |||||||| ||||||||||||
Sbjct: 200 gggacgttctcgatcttgccg 180
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>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02,
              complete sequence
          Length = 173522

 Score =  127 bits (64), Expect = 4e-26
 Identities = 121/140 (86%)
 Strand = Plus / Minus

                                                                          
Query: 357    ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
              |||||||||| |||||||||||||||||||| ||||||||||| || || ||   ||| |
Sbjct: 134813 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcacgaacaacaacgacga 134754

                                                                          
Query: 417    cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
              |||||||||| ||||||  ||| ||||| |||||||||||||||||||| | ||| || |
Sbjct: 134753 cgtccttgagcgtggcgccggcggggagccgccagtagtcgatggcgatcggcggcgcgg 134694

                                  
Query: 477    ggacgttgtcgatcttgccg 496
              ||||||| ||||||||||||
Sbjct: 134693 ggacgttctcgatcttgccg 134674
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>dbj|AB097431.1| Oryza sativa (japonica cultivar-group) transposon AnacA4(AOX) DNA,
            complete sequence
          Length = 2115

 Score =  127 bits (64), Expect = 4e-26
 Identities = 121/140 (86%)
 Strand = Plus / Minus

                                                                        
Query: 357  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
            |||||||||| |||||||||||||||||||| ||||||||||| || || ||   ||| |
Sbjct: 1144 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcacgaacaacaacgacga 1085

                                                                        
Query: 417  cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
            |||||||||| ||||||  ||| ||||| |||||||||||||||||||| | ||| || |
Sbjct: 1084 cgtccttgagcgtggcgccggcggggagccgccagtagtcgatggcgatcggcggcgcgg 1025

                                
Query: 477  ggacgttgtcgatcttgccg 496
            ||||||| ||||||||||||
Sbjct: 1024 ggacgttctcgatcttgccg 1005
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>gb|AY644467.1| Saccharum officinarum mitochondrial alternative oxidase 1c mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1189

 Score =  125 bits (63), Expect = 1e-25
 Identities = 162/195 (83%)
 Strand = Plus / Minus

                                                                       
Query: 302 tggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtccgat 361
           |||||||| | |||||| || ||  |||| |||| |||||||||| | |  | |||||| 
Sbjct: 951 tggtatccaagcggcgcaggtgtctccttgagctgcataccctggaaatgaatgtccgac 892

                                                                       
Query: 362 gcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtcc 421
           || ||||| ||||||||||||||||| |||||||||| |||||||||| | ||||| |||
Sbjct: 891 gcaaagtgattgacgtcgcggtggtgcgcctcgtcggagcgcaccacgataaccacatcc 832

                                                                       
Query: 422 ttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcagggacg 481
           ||||| || || |  || |||||  |||||||||||||||| |||||||| || ||||||
Sbjct: 831 ttgagcgtcgcatcagctgggagctgccagtagtcgatggcaatggccggcgcggggacg 772

                          
Query: 482 ttgtcgatcttgccg 496
           || ||||||||||||
Sbjct: 771 ttctcgatcttgccg 757
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>dbj|AB097429.1| Oryza sativa (japonica cultivar-group) transposon AnacA2(AOX) DNA,
            complete sequence
          Length = 2164

 Score =  123 bits (62), Expect = 6e-25
 Identities = 121/140 (86%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                        
Query: 357  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
            |||||||||| |||||||||||||||||||| ||||||||||||||    ||| |||| |
Sbjct: 1186 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcgcg---gacgatgacaa 1130

                                                                        
Query: 417  cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
            |||||||||| ||||||  ||| ||||| ||||||||||| |||||||| | ||| || |
Sbjct: 1129 cgtccttgagcgtggcgccggcggggagccgccagtagtcaatggcgatcggcggtgcgg 1070

                                
Query: 477  ggacgttgtcgatcttgccg 496
            ||||||| ||||||||||||
Sbjct: 1069 ggacgttctcgatcttgccg 1050
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  123 bits (62), Expect = 6e-25
 Identities = 121/140 (86%), Gaps = 3/140 (2%)
 Strand = Plus / Plus

                                                                           
Query: 357     ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
               |||||||||| |||||||||||||||||||| |||||||||||||| || |   |||| |
Sbjct: 3654211 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcgcggacga---tgacaa 3654267

                                                                           
Query: 417     cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
               |||||||||| ||||||  ||| ||||| ||||||||||| |||||||| | ||| || |
Sbjct: 3654268 cgtccttgagcgtggcgccggcggggagccgccagtagtcaatggcgatcggcggtgcgg 3654327

                                   
Query: 477     ggacgttgtcgatcttgccg 496
               ||||||| ||||||||||||
Sbjct: 3654328 ggacgttctcgatcttgccg 3654347
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>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0014B15
          Length = 158821

 Score =  123 bits (62), Expect = 6e-25
 Identities = 121/140 (86%), Gaps = 3/140 (2%)
 Strand = Plus / Plus

                                                                         
Query: 357   ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
             |||||||||| |||||||||||||||||||| |||||||||||||| || |   |||| |
Sbjct: 48439 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcgtcggcgcggacga---tgacaa 48495

                                                                         
Query: 417   cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggcag 476
             |||||||||| ||||||  ||| ||||| ||||||||||| |||||||| | ||| || |
Sbjct: 48496 cgtccttgagcgtggcgccggcggggagccgccagtagtcaatggcgatcggcggtgcgg 48555

                                 
Query: 477   ggacgttgtcgatcttgccg 496
             ||||||| ||||||||||||
Sbjct: 48556 ggacgttctcgatcttgccg 48575
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>ref|NM_194839.1| Oryza sativa (japonica cultivar-group) putative alternative oxidase
           (OSJNBa0030B02.13), mRNA
          Length = 732

 Score =  117 bits (59), Expect = 4e-23
 Identities = 113/131 (86%)
 Strand = Plus / Minus

                                                                       
Query: 335 tccataccctggtagtacacgtccgatgcgaagtggttgacgtcgcggtggtgagcctcg 394
           ||||| |||||| | | ||| ||||||||||| |||||||||||||||||||| ||||| 
Sbjct: 695 tccatcccctggaaatgcacatccgatgcgaaatggttgacgtcgcggtggtgcgcctca 636

                                                                       
Query: 395 tcggcgcgcaccacggtgaccacgtccttgagggtggcgttggccgggaggcgccagtag 454
           |||||||  || |||  ||| ||||||||||| ||||||| ||| ||||| |||||||||
Sbjct: 635 tcggcgcagacaacgacgacgacgtccttgagcgtggcgtcggcagggagccgccagtag 576

                      
Query: 455 tcgatggcgat 465
           |||||||||||
Sbjct: 575 tcgatggcgat 565
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>gb|AY059646.1| Zea mays alternative oxidase AOX1 precursor (Aox1) mRNA, nuclear gene
            encoding mitochondrial protein, complete cds
          Length = 1519

 Score =  115 bits (58), Expect = 1e-22
 Identities = 121/142 (85%)
 Strand = Plus / Minus

                                                                        
Query: 355  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgac 414
            |||||| || ||||| ||||||||||||||||| |||||||||| ||||||||||   ||
Sbjct: 1110 gtccgacgcaaagtgattgacgtcgcggtggtgcgcctcgtcggagcgcaccacgacaac 1051

                                                                        
Query: 415  cacgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgatggccggggc 474
            ||| |||||||| || || |  || |||||  |||||||||||||||| |||||||| ||
Sbjct: 1050 cacatccttgagcgtcgcatcagctgggagctgccagtagtcgatggcaatggccggcgc 991

                                  
Query: 475  agggacgttgtcgatcttgccg 496
             |||||||| ||||||||||||
Sbjct: 990  ggggacgttctcgatcttgccg 969
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>dbj|AB097430.1| Oryza sativa (japonica cultivar-group) transposon AnacA3(AOX) DNA,
            complete sequence
          Length = 3051

 Score =  113 bits (57), Expect = 6e-22
 Identities = 96/109 (88%)
 Strand = Plus / Minus

                                                                        
Query: 357  ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
            |||||||||| |||||||||||||||||||| ||||| |||||||  || |||  ||| |
Sbjct: 2068 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgcagacaacgacgacga 2009

                                                             
Query: 417  cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgat 465
            |||||||||| ||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 2008 cgtccttgagcgtggcgtcggcagggagccgccagtagtcgatggcgat 1960
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>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence
          Length = 146836

 Score =  113 bits (57), Expect = 6e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                          
Query: 357    ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
              |||||||||| |||||||||||||||||||| ||||| |||||||  || |||  ||| |
Sbjct: 110474 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgcagacaacgacgacga 110533

                                                               
Query: 417    cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgat 465
              |||||||||| ||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 110534 cgtccttgagcgtggcgtcggcagggagccgccagtagtcgatggcgat 110582
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  113 bits (57), Expect = 6e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                           
Query: 357     ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
               |||||||||| |||||||||||||||||||| ||||| |||||||  || |||  ||| |
Sbjct: 2783698 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgcagacaacgacgacga 2783757

                                                                
Query: 417     cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgat 465
               |||||||||| ||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 2783758 cgtccttgagcgtggcgtcggcagggagccgccagtagtcgatggcgat 2783806
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  113 bits (57), Expect = 6e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                           
Query: 357     ccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgacca 416
               |||||||||| |||||||||||||||||||| ||||| |||||||  || |||  ||| |
Sbjct: 2783649 ccgatgcgaaatggttgacgtcgcggtggtgcgcctcatcggcgcagacaacgacgacga 2783708

                                                                
Query: 417     cgtccttgagggtggcgttggccgggaggcgccagtagtcgatggcgat 465
               |||||||||| ||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 2783709 cgtccttgagcgtggcgtcggcagggagccgccagtagtcgatggcgat 2783757
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>gb|M60330.1|SURAOX1A S.guttatum aox1 mRNA encoding an alternative oxidase protein
          Length = 1404

 Score =  101 bits (51), Expect = 2e-18
 Identities = 105/123 (85%)
 Strand = Plus / Minus

                                                                        
Query: 298  tcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacacgtc 357
            ||||||||| |||| ||||||||| || | ||||||||| | | ||||||| |  |||||
Sbjct: 1123 tcagtggtacccgagcggcgccggcgtcgtcttcagctcaagatcctggtaatggacgtc 1064

                                                                        
Query: 358  cgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccac 417
             || |||||||||||||||||||||||||| |||||||| ||||| || |||||||| ||
Sbjct: 1063 ggaggcgaagtggttgacgtcgcggtggtgtgcctcgtctgcgcggacgacggtgacgac 1004

               
Query: 418  gtc 420
            |||
Sbjct: 1003 gtc 1001
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>emb|Z15117.1|SGAOX1G S.guttatum aox1 gene for salicylic acid-inducible alternative oxidase
          Length = 3584

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                       
Query: 362  gcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtc 420
            |||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||
Sbjct: 2806 gcgaagtggttgacgtcgcggtggtgtgcctcgtcggcgcggacgacggtgacgacgtc 2748
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>dbj|AB183695.1| Symplocarpus foetidus SfAOX mRNA for skunk cabbage alternative
            oxidase, complete cds
          Length = 1233

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 355  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 402
            |||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 1095 gtccgaggcaaagtggttgacgtcgcggtggtgggcctcgtcggcgcg 1048
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>dbj|AB190213.1| Philodendron bipinnatifidum PsAOX mRNA for alternative oxidase,
            complete cds
          Length = 1283

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                        
Query: 295  gcctcagtggtatccgatcggcgccggggtggccttcagctccataccctggtagtacac 354
            |||||||||||| || | |||||| || |  |||||||||||   ||| |||||||  | 
Sbjct: 1107 gcctcagtggtacccaagcggcgctggcgccgccttcagctcatgaccttggtagtggat 1048

                                                            
Query: 355  gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggcgcg 402
            ||| || |||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1047 gtcggaagcgaagtggttgacgtcgcggtggtgggcctcgtctgcgcg 1000
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>gb|AY422689.1| Nicotiana attenuata tissue-type shoot mitochondrial alternative
            oxidase (AOX2) mRNA, complete cds
          Length = 1278

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 359  gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 396
            ||||| ||||||||||| |||||||| |||||||||||
Sbjct: 1102 gatgcaaagtggttgacatcgcggtgatgagcctcgtc 1065
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>gb|DQ100439.1| Vigna unguiculata mitochondrial alternative oxidase 2b gene, complete
            cds; nuclear gene for mitochondrial product
          Length = 1566

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 448  ccagtagtcgatggcgatggccggggcagggacgtt 483
            ||||||||||||||| ||||| || |||||||||||
Sbjct: 1223 ccagtagtcgatggcaatggcaggagcagggacgtt 1188
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>emb|AJ421015.1|VUN421015 Vigna unguiculata mRNA for putative alternative oxidase (aox gene)
          Length = 1203

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 448 ccagtagtcgatggcgatggccggggcagggacgtt 483
           ||||||||||||||| ||||| || |||||||||||
Sbjct: 910 ccagtagtcgatggcaatggcaggagcagggacgtt 875
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>gb|AY422688.1| Nicotiana attenuata tissue-type shoot mitochondrial alternative
            oxidase (AOX1) mRNA, complete cds
          Length = 1420

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 359  gatgcgaagtggttgacgtcgcggtggtgagcctc 393
            ||||| ||||||||||| |||||||| ||||||||
Sbjct: 1090 gatgcaaagtggttgacatcgcggtgatgagcctc 1056
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>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07,
             complete sequence
          Length = 156163

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 376   gtcgcggtggtgagcctcgtcggcgcgcaccacggtgaccacgtcct 422
             ||||| |||||| |||||||||||||| |  |||||||| |||||||
Sbjct: 69974 gtcgcagtggtgcgcctcgtcggcgcggatgacggtgacgacgtcct 70020
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>gb|DQ100441.1| Vigna unguiculata mitochondrial alternative oxidase 1 mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 951

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 355 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtc 396
           |||||| || ||||||||||| || |||||||| ||||||||
Sbjct: 894 gtccgaagcaaagtggttgacatcacggtggtgtgcctcgtc 853



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 447 gccagtagtcgatggcgatggccgg 471
           |||||||||||||||| ||||||||
Sbjct: 802 gccagtagtcgatggcaatggccgg 778
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 367     gtggttgacgtcgcggtggtgagcctcgtc 396
               ||||||||||||||||||||| || |||||
Sbjct: 1631710 gtggttgacgtcgcggtggtgcgcttcgtc 1631739
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>gb|S71335.1| Aox1=alternative oxidase {alternative pathway} [Nicotiana
            tabacum=tobacco, cv Bright Yellow, suspension cells,
            mRNA, 1408 nt]
          Length = 1408

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 359  gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 396
            ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 1071 gatgcaaagtggttgacatcacggtgatgagcctcgtc 1034
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>emb|AJ538951.1|NTA538951 Nicotiana tabacum cDNA-AFLP-fragment BT3-M24-001
          Length = 649

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 359 gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 396
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 555 gatgcaaagtggttgacatcacggtgatgagcctcgtc 518
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>emb|AJ718098.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-24-600, cultivar Bright
           Yellow 2
          Length = 637

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 359 gatgcgaagtggttgacgtcgcggtggtgagcctcgtc 396
           ||||| ||||||||||| || ||||| |||||||||||
Sbjct: 547 gatgcaaagtggttgacatcacggtgatgagcctcgtc 510
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>gb|DQ100440.1| Vigna unguiculata mitochondrial alternative oxidase 1 gene, complete
            cds; nuclear gene for mitochondrial product
          Length = 1543

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 447  gccagtagtcgatggcgatggccgg 471
            |||||||||||||||| ||||||||
Sbjct: 1305 gccagtagtcgatggcaatggccgg 1281



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 365  aagtggttgacgtcgcggtggtgagcctcgtc 396
            ||||||||||| || |||||||| ||||||||
Sbjct: 1387 aagtggttgacatcacggtggtgtgcctcgtc 1356
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>gb|AE004896.1| Pseudomonas aeruginosa PAO1, section 457 of 529 of the complete genome
          Length = 11735

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 481   gttgtcgatcttgccgtcgtc 501
             |||||||||||||||||||||
Sbjct: 10775 gttgtcgatcttgccgtcgtc 10795
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>emb|AJ489270.1|CSA489270 Crocus sativus partial mRNA for alternative oxidase
          Length = 681

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 355 gtccgatgcgaagtggttgacgtcgcggtggtgagcctcgtcggc 399
           |||||| || ||||| ||||||||||| || |||||||| |||||
Sbjct: 414 gtccgaagcaaagtgattgacgtcgcgatgatgagcctcatcggc 370
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 454     gtcgatggcgatggccgggg 473
               ||||||||||||||||||||
Sbjct: 3038368 gtcgatggcgatggccgggg 3038387
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>ref|XM_644660.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (274.t00013)
           partial mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 231 tcaaaacgaaacactcattt 250
           ||||||||||||||||||||
Sbjct: 204 tcaaaacgaaacactcattt 223
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>emb|CR407594.22| Zebrafish DNA sequence from clone DKEY-122C11 in linkage group 4,
             complete sequence
          Length = 160262

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   tagcgatgcaaaattcagca 282
             ||||||||||||||||||||
Sbjct: 20972 tagcgatgcaaaattcagca 20953
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>gb|AY244554.1| Cucumis sativus alternative oxidase gene, partial cds; nuclear gene
           for mitochondrial product
          Length = 1080

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 448 ccagtagtcgatggcgatggccggggcagggacgtt 483
           ||||||||||||||| ||||| || ||||| |||||
Sbjct: 813 ccagtagtcgatggcaatggcgggagcaggaacgtt 778
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 396     cggcgcgcaccacggtgaccacgtcctt 423
               ||||||||||||||| || |||||||||
Sbjct: 1357570 cggcgcgcaccacggcgagcacgtcctt 1357543
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>emb|AJ250581.1|STE250581 Streptomyces tendae nikkomycin biosynthetic gene cluster (nikP1,
            nikP2, nikQ, nikR, nikS, nikT, nikU, nikV genes), strain
            Tue901
          Length = 9389

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 396  cggcgcgcaccacggtgacc 415
            ||||||||||||||||||||
Sbjct: 4409 cggcgcgcaccacggtgacc 4390
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>emb|AJ250199.1|STE250199 Streptomyces tendae nikkomycin biosynthetic gene cluster (nikQ, nikR
            genes), strain Tue901
          Length = 2218

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 396  cggcgcgcaccacggtgacc 415
            ||||||||||||||||||||
Sbjct: 1508 cggcgcgcaccacggtgacc 1489
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>gb|AC093151.2| Homo sapiens chromosome 1 clone RP11-399E6, complete sequence
          Length = 188276

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    cgtaactgacaagcacactg 143
              ||||||||||||||||||||
Sbjct: 119899 cgtaactgacaagcacactg 119918
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>gb|AY258276.2| Cucumis sativus MSC16 mitochondrial alternative oxidase 2 (aox2)
            gene, complete cds; nuclear gene for mitochondrial
            product
          Length = 3474

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 448  ccagtagtcgatggcgatggccggggcagggacgtt 483
            ||||||||||||||| ||||| || ||||| |||||
Sbjct: 2689 ccagtagtcgatggcaatggcgggagcaggaacgtt 2654
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>gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence
          Length = 186076

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 17    tgtacatagtgaggtagatcaatg 40
             ||||||||||||||||||| ||||
Sbjct: 59591 tgtacatagtgaggtagatgaatg 59568
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 313     cggcgccggggtggccttca 332
               ||||||||||||||||||||
Sbjct: 1721041 cggcgccggggtggccttca 1721022
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>emb|X79768.1|NTSR1AOX N.tabacum (SR1) aox mRNA
          Length = 1134

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 365 aagtggttgacgtcgcggtggtgagcctcgtc 396
           ||||||||||| || ||||| |||||||||||
Sbjct: 862 aagtggttgacatcacggtgatgagcctcgtc 831
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 451     gtagtcgatggcgatggccg 470
               ||||||||||||||||||||
Sbjct: 2064579 gtagtcgatggcgatggccg 2064560
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    tcgatggcgatggccggggc 474
              ||||||||||||||||||||
Sbjct: 604044 tcgatggcgatggccggggc 604063
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>dbj|AB055060.1| Catharanthus roseus gene for alternative oxidase, complete cds
          Length = 11471

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 366  agtggttgacgtcgcggtggtgagcctc 393
            ||||||| || |||||||||||||||||
Sbjct: 5510 agtggttaacatcgcggtggtgagcctc 5483


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,445,034
Number of Sequences: 3902068
Number of extensions: 3445034
Number of successful extensions: 171479
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 170871
Number of HSP's gapped (non-prelim): 591
length of query: 503
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 481
effective length of database: 17,147,199,772
effective search space: 8247803090332
effective search space used: 8247803090332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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