ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart18b06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY641433.1| Triticum aestivum eukaryotic translation initiation factor 3 subunit g mRNA, partial cds Length = 455 Score = 446 bits (225), Expect = e-122 Identities = 381/427 (89%), Gaps = 7/427 (1%) Strand = Plus / Minus Query: 22 tacaaaacttgatgaaatataaactcaagt-ccagtccttacggaattcactttttggcc 80 |||||| ||||||||||||||||||||||| ||| ||||| | |||||||||||| || Sbjct: 435 tacaaagcttgatgaaatataaactcaagtgccatcccttaagaaattcactttttcacc 376 Query: 81 aaacagagtgttgttattctcaacaaggcaaaacaagacacaagtttacgacaaaaa-ga 139 | |||||||| ||||||||||||||||||||||| |||||||| | |||||| ||| | Sbjct: 375 ac-cagagtgtagttattctcaacaaggcaaaacatgacacaagctcacgacacaaacgt 317 Query: 140 actgataatgcggagagcataaccat--gacacttg--ggatatctgaatgcttagtagg 195 || | || | |||||| ||||| || |||||||| ||| ||||| |||||||||||| Sbjct: 316 acgggtatttcggagaccataatgatacgacacttgtaggaaatctggatgcttagtagg 257 Query: 196 cagtaactaagtaggtctaggtgcagccatctccacatggaggataaggttatcataacc 255 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 256 cagtaactaagtaggcctaggtgcagccatctccacatggaggatgaggttatcataacc 197 Query: 256 atacccattgagcttgctgatggccttctcagcgtcctccctgtggacaaagttgacgaa 315 |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 196 atacccattgagcttgctgatggccttctcggcgtcctccctgtgaacaaagttgacaaa 137 Query: 316 accgaagcccctgctcattccagtcttctgatccaccgcgacgtagacacggctgacagc 375 || |||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 136 cccaaagcccctgctcattccagtcttctgatccaccgcgacatagacacggctgaccgg 77 Query: 376 accaaacgtgcggaacagctcgaggaggtcaggctcacgggtgtcctctgacagatttgt 435 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| || Sbjct: 76 gccaaacgtgcggaacagctcgaggaggtcgggctcgcgggtgtcctcagacagattggt 17 Query: 436 cacacgg 442 |||||| Sbjct: 16 aacacgg 10
>ref|XM_468182.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1150 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Minus Query: 236 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 295 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 930 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 871 Query: 296 ctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcg 355 ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 870 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgca 811 Query: 356 acgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgg 415 |||||||||||||| || | |||||| |||||||| ||||| || ||||| || |||||| Sbjct: 810 acgtagacacggctaactggaccaaatgtgcggaatagctcaagtaggtcgggttcacgg 751 Query: 416 gtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 750 gtgtcctctgatagattggtcacacggacagagttctcatcattcctacgcctcatgtc 692
>ref|XM_507016.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0054K20.22 mRNA Length = 1154 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Minus Query: 236 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 295 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 946 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 887 Query: 296 ctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcg 355 ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 886 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgca 827 Query: 356 acgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgg 415 |||||||||||||| || | |||||| |||||||| ||||| || ||||| || |||||| Sbjct: 826 acgtagacacggctaactggaccaaatgtgcggaatagctcaagtaggtcgggttcacgg 767 Query: 416 gtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 766 gtgtcctctgatagattggtcacacggacagagttctcatcattcctacgcctcatgtc 708
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Minus Query: 236 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 295 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 33514048 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 33513989 Query: 296 ctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcg 355 ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 33513988 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgca 33513929 Query: 356 acgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgg 415 |||||||||||||| || | |||||| |||||||| ||||| || ||||| || |||||| Sbjct: 33513928 acgtagacacggctaactggaccaaatgtgcggaatagctcaagtaggtcgggttcacgg 33513869 Query: 416 gtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 33513868 gtgtcctctgatagattggtcacacggacagagttctcatcattcctacgcctcatgtc 33513810 Score = 71.9 bits (36), Expect = 2e-09 Identities = 183/232 (78%) Strand = Plus / Minus Query: 236 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 295 ||||| ||| |||| || ||||| ||||||||||| ||||||| |||| ||||||||| Sbjct: 33511328 aggatgaggctatcgtagccatagccattgagcttagcgatggccctctcggcgtcctcc 33511269 Query: 296 ctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcg 355 |||| ||| ||| ||| ||| ||||| ||||||||| || ||| ||||||| |||| Sbjct: 33511268 ctgtagacgaagctgaggaagccgaaccccctgctctccccggtccggtgatccaacgcg 33511209 Query: 356 acgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgg 415 ||||| | ||| ||| | || || ||| |||||||||| ||||||| ||| ||| Sbjct: 33511208 acgtacgcgcgggtgagcgggccgaagctgccgaacagctcgcggaggtcttcctcgcgg 33511149 Query: 416 gtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcc 467 |||||||| ||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 33511148 gtgtcctccgacaggttggtgacgcggaccgagttctcgtcgttcctccgcc 33511097
>dbj|AP005535.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0054K20 Length = 153584 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Minus Query: 236 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 295 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 88923 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 88864 Query: 296 ctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcg 355 ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 88863 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgca 88804 Query: 356 acgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgg 415 |||||||||||||| || | |||||| |||||||| ||||| || ||||| || |||||| Sbjct: 88803 acgtagacacggctaactggaccaaatgtgcggaatagctcaagtaggtcgggttcacgg 88744 Query: 416 gtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 88743 gtgtcctctgatagattggtcacacggacagagttctcatcattcctacgcctcatgtc 88685 Score = 71.9 bits (36), Expect = 2e-09 Identities = 183/232 (78%) Strand = Plus / Minus Query: 236 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 295 ||||| ||| |||| || ||||| ||||||||||| ||||||| |||| ||||||||| Sbjct: 86203 aggatgaggctatcgtagccatagccattgagcttagcgatggccctctcggcgtcctcc 86144 Query: 296 ctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcg 355 |||| ||| ||| ||| ||| ||||| ||||||||| || ||| ||||||| |||| Sbjct: 86143 ctgtagacgaagctgaggaagccgaaccccctgctctccccggtccggtgatccaacgcg 86084 Query: 356 acgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgg 415 ||||| | ||| ||| | || || ||| |||||||||| ||||||| ||| ||| Sbjct: 86083 acgtacgcgcgggtgagcgggccgaagctgccgaacagctcgcggaggtcttcctcgcgg 86024 Query: 416 gtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcc 467 |||||||| ||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 86023 gtgtcctccgacaggttggtgacgcggaccgagttctcgtcgttcctccgcc 85972
>dbj|AK103497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131A11, full insert sequence Length = 1154 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Minus Query: 236 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 295 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 946 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 887 Query: 296 ctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcg 355 ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 886 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgca 827 Query: 356 acgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgg 415 |||||||||||||| || | |||||| |||||||| ||||| || ||||| || |||||| Sbjct: 826 acgtagacacggctaactggaccaaatgtgcggaatagctcaagtaggtcgggttcacgg 767 Query: 416 gtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 766 gtgtcctctgatagattggtcacacggacagagttctcatcattcctacgcctcatgtc 708
>dbj|AK060351.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-F12, full insert sequence Length = 1150 Score = 283 bits (143), Expect = 3e-73 Identities = 215/239 (89%) Strand = Plus / Minus Query: 236 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 295 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 930 aggataaggttatcataaccataaccattgagcttgctgatagccttctcagcgtcctct 871 Query: 296 ctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcg 355 ||||| |||||||||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct: 870 ctgtgaacaaagttgacgaagccgaaccccctgcttgctccagtcttctgatccaccgca 811 Query: 356 acgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgg 415 |||||||||||||| || | |||||| |||||||| ||||| || ||||| || |||||| Sbjct: 810 acgtagacacggctaactggaccaaatgtgcggaatagctcaagtaggtcgggttcacgg 751 Query: 416 gtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||||||||||| ||||| ||||||||||| |||||||| |||||||| ||||||||||| Sbjct: 750 gtgtcctctgatagattggtcacacggacagagttctcatcattcctacgcctcatgtc 692
>gb|AY107832.1| Zea mays PCO079325 mRNA sequence Length = 1165 Score = 246 bits (124), Expect = 6e-62 Identities = 205/232 (88%) Strand = Plus / Minus Query: 234 ggaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcct 293 ||||||||||||| |||||||||||||| ||||||||| ||||||||||||| ||||||| Sbjct: 911 ggaggataaggttgtcataaccatacccgttgagcttgttgatggccttctcggcgtcct 852 Query: 294 ccctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccg 353 | ||||| ||||||||||| || || || ||||||||| ||||||||||||||||||| Sbjct: 851 ctctgtgaacaaagttgacaaacccaaaccccctgctcgacccagtcttctgatccaccg 792 Query: 354 cgacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcac 413 ||||||||||||||||||||| ||||| | ||||| ||||| |||||||||||||| | Sbjct: 791 cgacgtagacacggctgacagggccaaaggcacggaagagctcaaggaggtcaggctcgc 732 Query: 414 gggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcg 465 |||||||||| || || || |||||||||||||| |||||||| |||||||| Sbjct: 731 gggtgtcctccgagaggttggtcacacggacggaattctcgtcgttcctgcg 680
>gb|BT019012.1| Zea mays clone Contig505.F mRNA sequence Length = 1140 Score = 238 bits (120), Expect = 2e-59 Identities = 204/232 (87%) Strand = Plus / Minus Query: 234 ggaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcct 293 ||||||||||||| |||||||||||||| ||||||||| ||||||||||||| ||||||| Sbjct: 885 ggaggataaggttgtcataaccatacccgttgagcttgttgatggccttctcggcgtcct 826 Query: 294 ccctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccg 353 | ||||| |||||||| || || || || ||||||||| ||||||||||||||||||| Sbjct: 825 ctctgtgaacaaagttcacaaacccaaaccccctgctcgacccagtcttctgatccaccg 766 Query: 354 cgacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcac 413 ||||||||||||||||||||| ||||| | ||||| ||||| |||||||||||||| | Sbjct: 765 cgacgtagacacggctgacagggccaaaggcacggaagagctcaaggaggtcaggctcgc 706 Query: 414 gggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcg 465 |||||||||| || || || |||||||||||||| |||||||| |||||||| Sbjct: 705 gggtgtcctccgagaggttggtcacacggacggaattctcgtcgttcctgcg 654
>ref|NM_111973.2| Arabidopsis thaliana EIF3G1; RNA binding / translation initiation factor AT3G11400 (EIF3G1) mRNA, complete cds Length = 1196 Score = 95.6 bits (48), Expect = 1e-16 Identities = 192/240 (80%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 1000 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 941 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 940 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 881 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| | |||||||||| | | |||||| ||||| Sbjct: 880 cacatagacacgtgtgacagctccaaacgggtggaacagctccatcaagtcaggttcacg 821 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 820 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 761
>emb|AJ293728.1|ATH293728 Arabidopsis thaliana partial mRNA for translation initiation factor 3, subunit g (eIF3g gene) Length = 1127 Score = 95.6 bits (48), Expect = 1e-16 Identities = 192/240 (80%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 912 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 853 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 852 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 793 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| | |||||||||| | | |||||| ||||| Sbjct: 792 cacatagacacgtgtgacagctccaaacgggtggaacagctccatcaagtcaggttcacg 733 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 732 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 673
>gb|AY133625.1| Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, complete cds Length = 885 Score = 95.6 bits (48), Expect = 1e-16 Identities = 192/240 (80%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 852 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 793 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 792 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 733 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| | |||||||||| | | |||||| ||||| Sbjct: 732 cacatagacacgtgtgacagctccaaacgggtggaacagctccatcaagtcaggttcacg 673 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 672 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 613
>gb|AY074582.1| Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, complete cds Length = 1114 Score = 95.6 bits (48), Expect = 1e-16 Identities = 192/240 (80%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 924 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 865 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 864 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 805 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| | |||||||||| | | |||||| ||||| Sbjct: 804 cacatagacacgtgtgacagctccaaacgggtggaacagctccatcaagtcaggttcacg 745 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 744 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 685
>gb|AF428308.1|AF428308 Arabidopsis thaliana AT3g11400/F24K9_7 mRNA, complete cds Length = 1124 Score = 95.6 bits (48), Expect = 1e-16 Identities = 192/240 (80%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 927 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 868 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 867 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 808 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| | |||||||||| | | |||||| ||||| Sbjct: 807 cacatagacacgtgtgacagctccaaacgggtggaacagctccatcaagtcaggttcacg 748 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 747 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 688
>dbj|AK220979.1| Arabidopsis thaliana mRNA for eukaryotic translation initiation factor 3 subunit like protein, complete cds, clone: RAFL22-58-D06 Length = 517 Score = 95.6 bits (48), Expect = 1e-16 Identities = 192/240 (80%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 271 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 212 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 211 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 152 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| | |||||||||| | | |||||| ||||| Sbjct: 151 cacatagacacgtgtgacagctccaaacgggtggaacagctccatcaagtcaggttcacg 92 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 91 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 32
>emb|BX824210.1|CNS0A5OW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZB07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1043 Score = 95.6 bits (48), Expect = 1e-16 Identities = 192/240 (80%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 894 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 835 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 834 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 775 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| | |||||||||| | | |||||| ||||| Sbjct: 774 cacatagacacgtgtgacagctccaaacgggtggaacagctccatcaagtcaggttcacg 715 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 714 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 655
>emb|BX822827.1|CNS0A5UP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 733 Score = 95.6 bits (48), Expect = 1e-16 Identities = 192/240 (80%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 537 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 478 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 477 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 418 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| | |||||||||| | | |||||| ||||| Sbjct: 417 cacatagacacgtgtgacagctccaaacgggtggaacagctccatcaagtcaggttcacg 358 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 357 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 298
>gb|AC008153.5|AC008153 Arabidopsis thaliana chromosome 3 BAC F24K9 genomic sequence, complete sequence Length = 117296 Score = 95.6 bits (48), Expect = 1e-16 Identities = 192/240 (80%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 22868 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 22809 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 22808 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 22749 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| | |||||||||| | | |||||| ||||| Sbjct: 22748 cacatagacacgtgtgacagctccaaacgggtggaacagctccatcaagtcaggttcacg 22689 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 22688 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 22629
>emb|BX823196.1|CNS0A5Y2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZF05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1032 Score = 93.7 bits (47), Expect = 6e-16 Identities = 137/167 (82%) Strand = Plus / Minus Query: 308 ttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcgacgtagacacgg 367 ||||||||||| || || ||||||| |||||| |||||||| | || || |||||||| Sbjct: 814 ttgacgaaaccaaatcctctgctcactccagttttctgatcaatggccacatagacacgt 755 Query: 368 ctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgggtgtcctctgac 427 ||||||| ||||||| | |||||||||| | | |||||| |||||||| ||||| ||| Sbjct: 754 gtgacagctccaaacgggtggaacagctccatcaagtcaggttcacgggtatcctcggac 695 Query: 428 agatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 694 agattggttacacgcacagagttctcatcgttcctcctcctcatgtc 648
>gb|BT014055.1| Lycopersicon esculentum clone 133153F, mRNA sequence Length = 1126 Score = 89.7 bits (45), Expect = 9e-15 Identities = 87/101 (86%) Strand = Plus / Minus Query: 248 tcataaccatacccattgagcttgctgatggccttctcagcgtcctccctgtggacaaag 307 ||||||||||| |||||||||||| | |||||| ||||||| || || |||| ||||||| Sbjct: 920 tcataaccataaccattgagcttgtttatggccctctcagcatcttctctgttgacaaag 861 Query: 308 ttgacgaaaccgaagcccctgctcattccagtcttctgatc 348 ||||| ||||| || || ||||||||||| ||||| ||||| Sbjct: 860 ttgacaaaaccaaatcctctgctcattcccgtcttttgatc 820
>emb|BX822539.1|CNS0A5TQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB47ZD10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 820 Score = 87.7 bits (44), Expect = 3e-14 Identities = 191/240 (79%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 626 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 567 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 566 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 507 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| | ||||| ||||||| | |||||||||| | | |||||| ||||| Sbjct: 506 cacatagacacgtgtaacagctccaaacgggtggaacagctccatcaagtcaggttcacg 447 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 446 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 387
>gb|AF291712.1|AF291712 Arabidopsis thaliana initiation factor 3g mRNA, complete cds Length = 1085 Score = 87.7 bits (44), Expect = 3e-14 Identities = 191/240 (79%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 894 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 835 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 834 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 775 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| |||||||||| | | |||||| ||||| Sbjct: 774 cacatagacacgtgtgacagctccaaacggatggaacagctccatcaagtcaggttcacg 715 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 714 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 655
>gb|AY087887.1| Arabidopsis thaliana clone 39231 mRNA, complete sequence Length = 1190 Score = 87.7 bits (44), Expect = 3e-14 Identities = 191/240 (79%) Strand = Plus / Minus Query: 235 gaggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctc 294 |||||| ||||||||||||||||| ||||| | ||| |||| || | | |||||| || Sbjct: 1000 gaggatgaggttatcataaccataaccattcaatttgttgattgctctttgagcgtcttc 941 Query: 295 cctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgc 354 ||| || || ||||||||||| || || ||||||| |||||| |||||||| | || Sbjct: 940 tctgctcacgaaattgacgaaaccaaatcctctgctcactccagttttctgatcaatggc 881 Query: 355 gacgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacg 414 || |||||||| ||||||| ||||||| |||||||||| | | |||||| ||||| Sbjct: 880 cacatagacacgtgtgacagctccaaacggatggaacagctccatcaagtcaggttcacg 821 Query: 415 ggtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||| ||||| |||||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 820 ggtatcctcggacagattggttacacgcacagagttctcatcgttcctcctcctcatgtc 761
>emb|BX822392.1|CNS0A63U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1084 Score = 85.7 bits (43), Expect = 1e-13 Identities = 136/167 (81%) Strand = Plus / Minus Query: 308 ttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcgacgtagacacgg 367 ||||||||||| || || ||||| | |||||| |||||||| | || || |||||||| Sbjct: 815 ttgacgaaaccaaatcctctgctaactccagttttctgatcaatggccacatagacacgt 756 Query: 368 ctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgggtgtcctctgac 427 ||||||| ||||||| | |||||||||| | | |||||| |||||||| ||||| ||| Sbjct: 755 gtgacagctccaaacgggtggaacagctccatcaagtcaggttcacgggtatcctcggac 696 Query: 428 agatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 695 agattggttacacgcacagagttctcatcgttcctcctcctcatgtc 649
>emb|BX822110.1|CNS0A60I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZD04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 624 Score = 85.7 bits (43), Expect = 1e-13 Identities = 136/167 (81%) Strand = Plus / Minus Query: 308 ttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcgacgtagacacgg 367 ||||||||||| || || ||||||| |||||| |||||||| | || || |||||||| Sbjct: 401 ttgacgaaaccaaatcctctgctcactccagttttctgatcaatggccacatagacacgt 342 Query: 368 ctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgggtgtcctctgac 427 | ||||| ||||||| | |||||||||| | | |||||| |||||||| ||||| ||| Sbjct: 341 gtaacagctccaaacgggtggaacagctccatcaagtcaggttcacgggtatcctcggac 282 Query: 428 agatttgtcacacggacggagttctcgtcattcctgcgcctcatgtc 474 ||||| || ||||| || |||||||| || ||||| | ||||||||| Sbjct: 281 agattggttacacgcacagagttctcatcgttcctcctcctcatgtc 235
>emb|BX824291.1|CNS0A5KI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH36ZH11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1003 Score = 75.8 bits (38), Expect = 1e-10 Identities = 134/166 (80%) Strand = Plus / Minus Query: 308 ttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcgacgtagacacgg 367 ||||||||||| || || ||||||| |||||| |||||||| | || || |||||||| Sbjct: 740 ttgacgaaaccaaatcctctgctcactccagttttctgatcaatggccacatagacacgt 681 Query: 368 ctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgggtgtcctctgac 427 ||| ||| ||||||| | |||||||||| | | || ||| |||||||| ||||| ||| Sbjct: 680 gtgagagcgccaaacgggtggaacagctccatcaagtgaggttcacgggtatcctcggac 621 Query: 428 agatttgtcacacggacggagttctcgtcattcctgcgcctcatgt 473 ||||| || ||||| || |||||||| || ||||| | |||||||| Sbjct: 620 agattggttacacgcacagagttctcatcgttcctcctcctcatgt 575
>ref|XM_468181.1| Oryza sativa (japonica cultivar-group), mRNA Length = 870 Score = 71.9 bits (36), Expect = 2e-09 Identities = 183/232 (78%) Strand = Plus / Minus Query: 236 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 295 ||||| ||| |||| || ||||| ||||||||||| ||||||| |||| ||||||||| Sbjct: 836 aggatgaggctatcgtagccatagccattgagcttagcgatggccctctcggcgtcctcc 777 Query: 296 ctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcg 355 |||| ||| ||| ||| ||| ||||| ||||||||| || ||| ||||||| |||| Sbjct: 776 ctgtagacgaagctgaggaagccgaaccccctgctctccccggtccggtgatccaacgcg 717 Query: 356 acgtagacacggctgacagcaccaaacgtgcggaacagctcgaggaggtcaggctcacgg 415 ||||| | ||| ||| | || || ||| |||||||||| ||||||| ||| ||| Sbjct: 716 acgtacgcgcgggtgagcgggccgaagctgccgaacagctcgcggaggtcttcctcgcgg 657 Query: 416 gtgtcctctgacagatttgtcacacggacggagttctcgtcattcctgcgcc 467 |||||||| ||||| || || || ||||| ||||||||||| ||||| |||| Sbjct: 656 gtgtcctccgacaggttggtgacgcggaccgagttctcgtcgttcctccgcc 605
>gb|AC137078.24| Medicago truncatula clone mth2-10e12, complete sequence Length = 144306 Score = 63.9 bits (32), Expect = 5e-07 Identities = 131/164 (79%) Strand = Plus / Minus Query: 236 aggataaggttatcataaccatacccattgagcttgctgatggccttctcagcgtcctcc 295 ||||| || ||||| || ||||| |||||||| ||| |||| ||| ||| ||| || ||| Sbjct: 102930 aggatgagattatcgtagccatatccattgagtttgttgatagccctctgagcatcttcc 102871 Query: 296 ctgtggacaaagttgacgaaaccgaagcccctgctcattccagtcttctgatccaccgcg 355 ||| ||||||||||| || || |||||||| ||||| |||||||| ||||| | || Sbjct: 102870 ctgctaacaaagttgacaaagccaaagcccctactcatgccagtcttttgatcaatagca 102811 Query: 356 acgtagacacggctgacagcaccaaacgtgcggaacagctcgag 399 || ||||| | |||||||||||||| | ||||| |||||||| Sbjct: 102810 acatagaccctactgacagcaccaaaaggccggaaaagctcgag 102767
>emb|AJ310437.1|PFL310437 Platichthys flesus partial mRNA for eukaryotic translation initiation factor 3 p42 (eif3p42 gene) Length = 395 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 403 gtcaggctcacgggtgtcctctgacagatttgtcacacgga 443 ||||| ||||||||||||||| || ||||| |||||||||| Sbjct: 179 gtcagtctcacgggtgtcctcagaaagattggtcacacgga 139
>emb|CR713317.2|CNS0GDCH Tetraodon nigroviridis full-length cDNA Length = 995 Score = 46.1 bits (23), Expect = 0.12 Identities = 35/39 (89%) Strand = Plus / Minus Query: 403 gtcaggctcacgggtgtcctctgacagatttgtcacacg 441 ||||| ||||||||||||||| |||| ||| |||||||| Sbjct: 713 gtcagcctcacgggtgtcctcagacaaattagtcacacg 675
>gb|AC092631.1| Homo sapiens BAC clone RP11-326P21 from 4, complete sequence Length = 191468 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 aacaaggcaaaacaagacacaa 123 |||||||||||||||||||||| Sbjct: 176043 aacaaggcaaaacaagacacaa 176064
>ref|XM_863151.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 8 (LOC612971), mRNA Length = 1007 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 403 gtcaggctcacgggtgtcctctgacagatttgtcacacgga 443 ||||| |||||| |||||||||||||| || || ||||||| Sbjct: 818 gtcagtctcacgagtgtcctctgacaggttggtgacacgga 778
>ref|XM_863146.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 7 (LOC612971), mRNA Length = 1153 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 403 gtcaggctcacgggtgtcctctgacagatttgtcacacgga 443 ||||| |||||| |||||||||||||| || || ||||||| Sbjct: 839 gtcagtctcacgagtgtcctctgacaggttggtgacacgga 799
>ref|XM_863141.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 6 (LOC612971), mRNA Length = 1017 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 403 gtcaggctcacgggtgtcctctgacagatttgtcacacgga 443 ||||| |||||| |||||||||||||| || || ||||||| Sbjct: 703 gtcagtctcacgagtgtcctctgacaggttggtgacacgga 663
>ref|XM_863137.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 5 (LOC612971), mRNA Length = 869 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 403 gtcaggctcacgggtgtcctctgacagatttgtcacacgga 443 ||||| |||||| |||||||||||||| || || ||||||| Sbjct: 555 gtcagtctcacgagtgtcctctgacaggttggtgacacgga 515
>ref|XM_863134.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 4 (LOC612971), mRNA Length = 786 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 403 gtcaggctcacgggtgtcctctgacagatttgtcacacgga 443 ||||| |||||| |||||||||||||| || || ||||||| Sbjct: 472 gtcagtctcacgagtgtcctctgacaggttggtgacacgga 432
>ref|XM_849020.1| PREDICTED: Canis familiaris similar to Eukaryotic translation initiation factor 3 subunit 4 (eIF-3 delta) (eIF3 p44) (eIF-3 RNA-binding subunit) (eIF3 p42) (eIF3g), transcript variant 1 (LOC612971), mRNA Length = 1126 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 403 gtcaggctcacgggtgtcctctgacagatttgtcacacgga 443 ||||| |||||| |||||||||||||| || || ||||||| Sbjct: 812 gtcagtctcacgagtgtcctctgacaggttggtgacacgga 772
>emb|CR733959.2|CNS0GT3Q Tetraodon nigroviridis full-length cDNA Length = 989 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 706 ctcacgggtgtcctcagacaaattagtcacacg 674
>emb|CR723985.2|CNS0GLKN Tetraodon nigroviridis full-length cDNA Length = 998 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 715 ctcacgggtgtcctcagacaaattagtcacacg 683
>emb|CR718000.2|CNS0GGYE Tetraodon nigroviridis full-length cDNA Length = 895 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 729 ctcacgggtgtcctcagacaaattagtcacacg 697
>emb|CR712807.2|CNS0GCYB Tetraodon nigroviridis full-length cDNA Length = 842 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 554 ctcacgggtgtcctcagacaaattagtcacacg 522
>emb|CR712676.2|CNS0GCUO Tetraodon nigroviridis full-length cDNA Length = 873 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 707 ctcacgggtgtcctcagacaaattagtcacacg 675
>emb|CR708896.2|CNS0G9XO Tetraodon nigroviridis full-length cDNA Length = 873 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 707 ctcacgggtgtcctcagacaaattagtcacacg 675
>emb|CR706572.2|CNS0G854 Tetraodon nigroviridis full-length cDNA Length = 873 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 707 ctcacgggtgtcctcagacaaattagtcacacg 675
>emb|CR705626.2|CNS0G7EU Tetraodon nigroviridis full-length cDNA Length = 871 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 707 ctcacgggtgtcctcagacaaattagtcacacg 675
>emb|CR704405.2|CNS0G6GX Tetraodon nigroviridis full-length cDNA Length = 957 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 686 ctcacgggtgtcctcagacaaattagtcacacg 654
>emb|CR703930.2|CNS0G63Q Tetraodon nigroviridis full-length cDNA Length = 973 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 691 ctcacgggtgtcctcagacaaattagtcacacg 659
>emb|CR703241.2|CNS0G5KL Tetraodon nigroviridis full-length cDNA Length = 988 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 705 ctcacgggtgtcctcagacaaattagtcacacg 673
>emb|CR701881.2|CNS0G4IT Tetraodon nigroviridis full-length cDNA Length = 920 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 754 ctcacgggtgtcctcagacaaattagtcacacg 722
>emb|CR700852.2|CNS0G3Q8 Tetraodon nigroviridis full-length cDNA Length = 1002 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 719 ctcacgggtgtcctcagacaaattagtcacacg 687
>emb|CR698154.2|CNS0G1NA Tetraodon nigroviridis full-length cDNA Length = 1051 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 701 ctcacgggtgtcctcagacaaattagtcacacg 669
>emb|CR697832.2|CNS0G1EC Tetraodon nigroviridis full-length cDNA Length = 988 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 716 ctcacgggtgtcctcagacaaattagtcacacg 684
>emb|CR697190.2|CNS0G0WI Tetraodon nigroviridis full-length cDNA Length = 852 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 568 ctcacgggtgtcctcagacaaattagtcacacg 536
>emb|CR695248.2|CNS0FZEK Tetraodon nigroviridis full-length cDNA Length = 984 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 707 ctcacgggtgtcctcagacaaattagtcacacg 675
>emb|CR691742.2|CNS0FWP6 Tetraodon nigroviridis full-length cDNA Length = 983 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 700 ctcacgggtgtcctcagacaaattagtcacacg 668
>emb|CR691667.2|CNS0FWN3 Tetraodon nigroviridis full-length cDNA Length = 959 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 687 ctcacgggtgtcctcagacaaattagtcacacg 655
>emb|CR691364.1|CNS0FWEO Tetraodon nigroviridis full-length cDNA Length = 1340 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 1074 ctcacgggtgtcctcagacaaattagtcacacg 1042
>emb|CR686463.1|CNS0FSMJ Tetraodon nigroviridis full-length cDNA Length = 966 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 694 ctcacgggtgtcctcagacaaattagtcacacg 662
>emb|CR683660.2|CNS0FQGO Tetraodon nigroviridis full-length cDNA Length = 997 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 716 ctcacgggtgtcctcagacaaattagtcacacg 684
>emb|CR682344.2|CNS0FPG4 Tetraodon nigroviridis full-length cDNA Length = 961 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 691 ctcacgggtgtcctcagacaaattagtcacacg 659
>emb|CR681477.2|CNS0FOS1 Tetraodon nigroviridis full-length cDNA Length = 987 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 705 ctcacgggtgtcctcagacaaattagtcacacg 673
>emb|CR681101.2|CNS0FOHL Tetraodon nigroviridis full-length cDNA Length = 869 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 703 ctcacgggtgtcctcagacaaattagtcacacg 671
>emb|CR681047.2|CNS0FOG3 Tetraodon nigroviridis full-length cDNA Length = 989 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 707 ctcacgggtgtcctcagacaaattagtcacacg 675
>emb|CR679535.2|CNS0FNA3 Tetraodon nigroviridis full-length cDNA Length = 979 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 707 ctcacgggtgtcctcagacaaattagtcacacg 675
>emb|CR667936.2|CNS0FECM Tetraodon nigroviridis full-length cDNA Length = 982 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 700 ctcacgggtgtcctcagacaaattagtcacacg 668
>emb|CR665938.2|CNS0FCT4 Tetraodon nigroviridis full-length cDNA Length = 992 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 709 ctcacgggtgtcctcagacaaattagtcacacg 677
>emb|CR658901.2|CNS0F7DN Tetraodon nigroviridis full-length cDNA Length = 1007 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 723 ctcacgggtgtcctcagacaaattagtcacacg 691
>emb|CR654533.1|CNS0F40B Tetraodon nigroviridis full-length cDNA Length = 960 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 688 ctcacgggtgtcctcagacaaattagtcacacg 656
>emb|CR647894.2|CNS0EYVW Tetraodon nigroviridis full-length cDNA Length = 981 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 702 ctcacgggtgtcctcagacaaattagtcacacg 670
>emb|CR641658.2|CNS0EU2O Tetraodon nigroviridis full-length cDNA Length = 874 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 409 ctcacgggtgtcctctgacagatttgtcacacg 441 ||||||||||||||| |||| ||| |||||||| Sbjct: 707 ctcacgggtgtcctcagacaaattagtcacacg 675
>emb|AL160272.16| Human DNA sequence from clone RP11-336A17 on chromosome 9 Contains the TLR4 gene for toll-like receptor 4, the 5' end of a novel gene and a CpG island, complete sequence Length = 146978 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 aaaacttgatgaaatataaac 45 ||||||||||||||||||||| Sbjct: 126040 aaaacttgatgaaatataaac 126060
>emb|CR753873.6| Zebrafish DNA sequence from clone DKEY-145O23 in linkage group 5, complete sequence Length = 173372 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 274 gatggccttctcagcgtcctccctg 298 |||||||||| |||||||||||||| Sbjct: 166174 gatggccttcgcagcgtcctccctg 166198
>gb|AC108518.3| Homo sapiens BAC clone RP11-699F8 from 4, complete sequence Length = 120612 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 ctgaatgcttagtaggcagta 200 ||||||||||||||||||||| Sbjct: 34307 ctgaatgcttagtaggcagta 34327
>gb|AC021216.6| Homo sapiens BAC clone RP11-497K18 from 4, complete sequence Length = 84902 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 ctgaatgcttagtaggcagta 200 ||||||||||||||||||||| Sbjct: 14013 ctgaatgcttagtaggcagta 14033
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 133 aaaaagaactgataatgcggagagc 157 |||||||||||||||||| |||||| Sbjct: 1120440 aaaaagaactgataatgcagagagc 1120416
>gb|AC134919.3| Homo sapiens BAC clone RP13-485B10 from 4, complete sequence Length = 145992 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 ctgaatgcttagtaggcagta 200 ||||||||||||||||||||| Sbjct: 4638 ctgaatgcttagtaggcagta 4658
>ref|NM_120682.2| Arabidopsis thaliana EIF3G2; RNA binding / translation initiation factor AT5G06000 (EIF3G2) mRNA, complete cds Length = 1037 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 411 cacgggtgtcctctgacagatttgtcacacggacggagttctcgtcat 458 ||||||| || || |||| ||| ||||||||||| |||||||| |||| Sbjct: 654 cacgggtatcttcagacaaattagtcacacggacagagttctcatcat 607
>gb|AC167173.4| Mus musculus BAC clone RP23-30D21 from chromosome 3, complete sequence Length = 203513 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 atatctgaatgcttagtaggcagtaact 203 |||| |||||||||||||| |||||||| Sbjct: 37653 atatttgaatgcttagtagccagtaact 37626
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome Length = 3481691 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 aggtgcagccatctccacat 233 |||||||||||||||||||| Sbjct: 3375608 aggtgcagccatctccacat 3375627
>ref|XM_324155.1| Neurospora crassa OR74A hypothetical protein (NCU04799.1) partial mRNA Length = 2295 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 aagttgacgaaaccgaagcc 324 |||||||||||||||||||| Sbjct: 863 aagttgacgaaaccgaagcc 844
>ref|XM_955332.1| Neurospora crassa OR74A hypothetical protein (NCU04799.1) partial mRNA Length = 2295 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 aagttgacgaaaccgaagcc 324 |||||||||||||||||||| Sbjct: 863 aagttgacgaaaccgaagcc 844
>ref|XM_656512.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4000.2), mRNA Length = 2136 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 aagttgacgaaaccgaagcc 324 |||||||||||||||||||| Sbjct: 809 aagttgacgaaaccgaagcc 790
>gb|CP000233.1| Lactobacillus salivarius subsp. salivarius UCC118, complete genome Length = 1827111 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tctacaaaacttgatgaaat 39 |||||||||||||||||||| Sbjct: 888886 tctacaaaacttgatgaaat 888905
>gb|AC004925.1| Homo sapiens PAC clone RP5-907C10 from 7, complete sequence Length = 154959 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 acaaaacttgatgaaatata 42 |||||||||||||||||||| Sbjct: 28359 acaaaacttgatgaaatata 28340
>ref|XM_745074.1| Aspergillus fumigatus Af293 polyadenylate-binding protein (Afu1g04190) partial mRNA Length = 2262 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 310 gacgaaaccgaagcccctgctcattcca 337 |||||||||||||||| ||||| ||||| Sbjct: 1284 gacgaaaccgaagcccttgctctttcca 1257
>emb|CR376778.9| Zebrafish DNA sequence from clone DKEYP-94F12 in linkage group 25, complete sequence Length = 185814 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 gatggccttctcagcgtcctccct 297 |||||||||| ||||||||||||| Sbjct: 57435 gatggccttcgcagcgtcctccct 57458
>emb|BX510935.28| Zebrafish DNA sequence from clone DKEY-207L24 in linkage group 14, complete sequence Length = 128666 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 gatggccttctcagcgtcctccct 297 |||||||||| ||||||||||||| Sbjct: 51839 gatggccttcgcagcgtcctccct 51862
>gb|AC139292.4| Mus musculus BAC clone RP24-279K6 from chromosome 3, complete sequence Length = 165051 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 atatctgaatgcttagtaggcagtaact 203 |||| |||||||||||||| |||||||| Sbjct: 70742 atatttgaatgcttagtagccagtaact 70769
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ttgagcttgctgatggcctt 282 |||||||||||||||||||| Sbjct: 1188015 ttgagcttgctgatggcctt 1187996
>gb|AC161369.3| Mus musculus BAC clone RP23-426C11 from chromosome 3, complete sequence Length = 202655 Score = 40.1 bits (20), Expect = 7.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 176 atatctgaatgcttagtaggcagtaact 203 |||| |||||||||||||| |||||||| Sbjct: 170374 atatttgaatgcttagtagccagtaact 170347
>emb|BX510311.6| Zebrafish DNA sequence from clone CH211-235F16, complete sequence Length = 198245 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 gatggccttctcagcgtcctccct 297 |||||||||| ||||||||||||| Sbjct: 194328 gatggccttcgcagcgtcctccct 194305
>gb|AY072407.1| Arabidopsis thaliana eukaryotic translation initiation factor 3 subunit-like protein (At5g06000) mRNA, complete cds Length = 940 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 411 cacgggtgtcctctgacagatttgtcacacggacggagttctcgtcat 458 ||||||| || || |||| ||| ||||||||||| |||||||| |||| Sbjct: 653 cacgggtatcttcagacaaattagtcacacggacagagttctcatcat 606
>emb|BX511020.10| Zebrafish DNA sequence from clone RP71-9C18, complete sequence Length = 160830 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 gatggccttctcagcgtcctccct 297 |||||||||| ||||||||||||| Sbjct: 142114 gatggccttcgcagcgtcctccct 142137
>gb|AC091656.3| Rattus norvegicus strain Brown Norway clone RP31-236J24, complete sequence Length = 132420 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 tcagcgtcctccctgtggac 303 |||||||||||||||||||| Sbjct: 53721 tcagcgtcctccctgtggac 53702
>emb|BX088547.12| Zebrafish DNA sequence from clone DKEY-238O14, complete sequence Length = 256446 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 gatggccttctcagcgtcctccct 297 |||||||||| ||||||||||||| Sbjct: 7583 gatggccttcgcagcgtcctccct 7560
>dbj|AB017060.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18J17 Length = 54252 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 411 cacgggtgtcctctgacagatttgtcacacggacggagttctcgtcat 458 ||||||| || || |||| ||| ||||||||||| |||||||| |||| Sbjct: 42358 cacgggtatcttcagacaaattagtcacacggacagagttctcatcat 42311
>gb|AC147869.3| Monodelphis domestica clone VMRC6-113K21, complete sequence Length = 157763 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 atgaaatataaactcaagtc 52 |||||||||||||||||||| Sbjct: 61066 atgaaatataaactcaagtc 61047
>gb|BT002127.1| Arabidopsis thaliana eukaryotic translation initiation factor 3 subunit-like protein (At5g06000) mRNA, complete cds Length = 855 Score = 40.1 bits (20), Expect = 7.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 411 cacgggtgtcctctgacagatttgtcacacggacggagttctcgtcat 458 ||||||| || || |||| ||| ||||||||||| |||||||| |||| Sbjct: 559 cacgggtatcttcagacaaattagtcacacggacagagttctcatcat 512
>emb|AL713996.11| Zebrafish DNA sequence from clone BUSM1-201C3 in linkage group 9, complete sequence Length = 58037 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 274 gatggccttctcagcgtcctccct 297 |||||||||| ||||||||||||| Sbjct: 22901 gatggccttcgcagcgtcctccct 22878
>dbj|AP001696.1| Homo sapiens genomic DNA, chromosome 21q, section 40/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ataaactcaagtccagtcct 59 |||||||||||||||||||| Sbjct: 109493 ataaactcaagtccagtcct 109474
>emb|CR555293.8| Zebrafish DNA sequence from clone DKEY-23P14 in linkage group 11, complete sequence Length = 220631 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 gatggccttctcagcgtcctccct 297 |||||||||| ||||||||||||| Sbjct: 50977 gatggccttcgcagcgtcctccct 51000
>emb|BX005356.7| Zebrafish DNA sequence from clone CH211-255I20 in linkage group 14, complete sequence Length = 171108 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 gatggccttctcagcgtcctccct 297 |||||||| ||||||||||||||| Sbjct: 169218 gatggcctcctcagcgtcctccct 169241
>gb|U70731.1|ENU70731 Emericella nidulans putative poly(A)-binding protein (fabM) gene, complete cds Length = 3076 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 aagttgacgaaaccgaagcc 324 |||||||||||||||||||| Sbjct: 1443 aagttgacgaaaccgaagcc 1424
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 atgaaatataaactcaagtc 52 |||||||||||||||||||| Sbjct: 1489630 atgaaatataaactcaagtc 1489611
>dbj|AP001596.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1466C5, APP-D21S292 region, complete sequence Length = 151079 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ataaactcaagtccagtcct 59 |||||||||||||||||||| Sbjct: 10678 ataaactcaagtccagtcct 10659 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,078,904 Number of Sequences: 3902068 Number of extensions: 4078904 Number of successful extensions: 76238 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76007 Number of HSP's gapped (non-prelim): 229 length of query: 536 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 513 effective length of database: 17,143,297,704 effective search space: 8794511722152 effective search space used: 8794511722152 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
