ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart18b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106114.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
2dbj|AK069046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 107 3e-20
3gb|AY107894.1| Zea mays PCO107975 mRNA sequence 86 1e-13
4gb|AY104390.1| Zea mays PCO107974 mRNA sequence 76 1e-10
5ref|XM_476698.1| Oryza sativa (japonica cultivar-group), mRNA 68 3e-08
6ref|XM_506171.1| PREDICTED Oryza sativa (japonica cultivar-group... 68 3e-08
7dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
8dbj|AK098844.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
9dbj|AK065047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
10dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
11gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno... 66 1e-07
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 66 1e-07
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
14gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 geno... 66 1e-07
15dbj|AK073842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
16gb|AY112540.1| Zea mays CL33472_1 mRNA sequence 62 2e-06
17gb|AY541627.1| Leiognathus elongatus from Japan cytochrome oxida... 46 0.11
18gb|AY666511.1| Piranga olivacea voucher 1B-1258 cytochrome oxida... 44 0.43
19gb|AC110898.7| Mus musculus chromosome 18, clone RP24-114C6, com... 44 0.43
20gb|AY275859.1| Cypseloides rutilus cytochrome oxidase subunit I ... 44 0.43
21emb|AL596094.2| Human DNA sequence from clone RP11-318E3 on chro... 44 0.43
22gb|AF391350.1| Stiphodon elegans cytochrome c oxidase subunit I ... 44 0.43
23gb|AF460846.1| Cynocephalus variegatus mitochondrion, complete g... 44 0.43
24emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in... 44 0.43
25emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on ch... 44 0.43
26gb|AF165496.1| Ortalis canicollis cytochrome oxidase subunit I (... 42 1.7
27gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genom... 42 1.7
28gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, com... 42 1.7
29emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chr... 42 1.7
30gb|AC122587.5| Rattus norvegicus BAC CH230-173H6 (Children's Ho... 42 1.7
31gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, comple... 42 1.7
32gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chrom... 42 1.7
33gb|AC161820.5| Pan troglodytes BAC clone CH251-502M7 from chromo... 42 1.7
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
35dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
36gb|AF036942.1|AF036942 Gallus gallus photoreceptor guanylate cyc... 42 1.7
37dbj|AB034825.1| Diplophos taenia mitochondrial DNA, complete genome 42 1.7
38ref|NM_124782.1| Arabidopsis thaliana unknown protein AT5G54030 ... 40 6.8
39gb|AY666413.1| Bombycilla garrulus voucher 1B-2754 cytochrome ox... 40 6.8
40gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, comp... 40 6.8
41ref|XM_450393.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
42gb|AC103637.11| Mus musculus chromosome 3, clone RP24-376O20, co... 40 6.8
43gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, co... 40 6.8
44gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosom... 40 6.8
45gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, comp... 40 6.8
46gb|AC139377.4| Mus musculus chromosome 5 clone RP24-291G12, comp... 40 6.8
47gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, co... 40 6.8
48gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, com... 40 6.8
49gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosom... 40 6.8
50gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, compl... 40 6.8
51gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, com... 40 6.8
52emb|BX664742.15| Zebrafish DNA sequence from clone DKEY-193L3 in... 40 6.8
53emb|AL157787.11| Human DNA sequence from clone RP11-328K1 on chr... 40 6.8
54gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genom... 40 6.8
55gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 6.8
56emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 40 6.8
57emb|CR786582.5| Zebrafish DNA sequence from clone DKEYP-14C8 in ... 40 6.8
58gb|AC090149.6| Homo sapiens chromosome 8, clone RP11-429M12, com... 40 6.8
59dbj|AP008932.1| Rhodococcus erythropolis PR4 plasmid pREC1, comp... 40 6.8
60gb|AC090575.11| Homo sapiens chromosome 8, clone RP11-480D6, com... 40 6.8
61gb|AC037450.6| Homo sapiens chromosome 8, clone RP11-226G12, com... 40 6.8
62gb|AC097512.2| Homo sapiens BAC clone RP11-412P11 from 4, comple... 40 6.8
63gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome... 40 6.8
64gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosom... 40 6.8
65gb|AC008654.5|AC008654 Homo sapiens chromosome 5 clone CTB-191B1... 40 6.8
66gb|DP000030.1| Sus scrofa target 116 genomic scaffold 40 6.8
67gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5... 40 6.8
68gb|AC141557.5| Homo sapiens 12 BAC CTD-2318O12 (Cal Tech Human B... 40 6.8
69gb|AF391378.1| Amblygobius phalaena isolate 2 cytochrome c oxida... 40 6.8
70gb|AF391372.1| Xenisthmus sp. CET-2001 cytochrome c oxidase subu... 40 6.8
71gb|AF391367.1| Mogurnda adspersa cytochrome c oxidase subunit I ... 40 6.8
72gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Can... 40 6.8
73dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.8
74dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
75dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
76dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
77emb|BX324200.5| Mouse DNA sequence from clone RP23-382H2 on chro... 40 6.8
78dbj|AB007644.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.8
79gb|AC002476.1|AC002476 Human PAC clone RP1-318C15 from Xq23, com... 40 6.8
80gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complet... 40 6.8
81dbj|AK063538.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
82dbj|AK061510.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
83emb|AJ544610.1|TRU544610 Takifugu rubripes dmd gene for putative... 40 6.8
84gb|AC164438.3| Mus musculus BAC clone RP23-62L19 from chromosome... 40 6.8
85dbj|AB241052.1| Distoechurus pennatus mitochondrial DNA, complet... 40 6.8
86gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, c... 40 6.8
87emb|AL450397.19| Mouse DNA sequence from clone RP23-100G16 on ch... 40 6.8
88dbj|AB021880.1| Balanus amphitrite bcs-5 mRNA, complete cds 40 6.8 
>dbj|AK106114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E02, full
            insert sequence
          Length = 1722

 Score =  107 bits (54), Expect = 3e-20
 Identities = 181/222 (81%), Gaps = 6/222 (2%)
 Strand = Plus / Minus

                                                                        
Query: 282  tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 341
            ||||||||||||| || |||||| |||||||||| | || ||||||||||  ||||||||
Sbjct: 1557 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 1498

                                                                        
Query: 342  cctccaacagcttgcctcgccggagcttgctcttcctg---gagccggtgacggcgggcg 398
            | || |||| |||||||| |||||| ||| ||||| ||   | |||||||||||||||||
Sbjct: 1497 cttctaacaacttgcctctccggagtttgttcttcttgcgagtgccggtgacggcgggcg 1438

                                                                        
Query: 399  ccttcctctccggggtggagaccggcgtggccggcttcttgtcgtcctccgggagcagca 458
            || ||||  |||| |  | | |||||   |||| |||  |||| |||  ||||| |||||
Sbjct: 1437 ccctcctgaccggcgccgtgtccggc---gccgtcttggtgtcatccggcgggaacagca 1381

                                                      
Query: 459  cggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
            ||||||| ||||||||||| | ||||||||| ||||||||||
Sbjct: 1380 cggcgtcaatgccctgcactgcgatcctgccatccgtgtaga 1339
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>dbj|AK069046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009K09, full
            insert sequence
          Length = 1903

 Score =  107 bits (54), Expect = 3e-20
 Identities = 181/222 (81%), Gaps = 6/222 (2%)
 Strand = Plus / Minus

                                                                        
Query: 282  tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 341
            ||||||||||||| || |||||| |||||||||| | || ||||||||||  ||||||||
Sbjct: 1558 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 1499

                                                                        
Query: 342  cctccaacagcttgcctcgccggagcttgctcttcctg---gagccggtgacggcgggcg 398
            | || |||| |||||||| |||||| ||| ||||| ||   | |||||||||||||||||
Sbjct: 1498 cttctaacaacttgcctctccggagtttgttcttcttgcgagtgccggtgacggcgggcg 1439

                                                                        
Query: 399  ccttcctctccggggtggagaccggcgtggccggcttcttgtcgtcctccgggagcagca 458
            || ||||  |||| |  | | |||||   |||| |||  |||| |||  ||||| |||||
Sbjct: 1438 ccctcctgaccggcgccgtgtccggc---gccgtcttggtgtcatccggcgggaacagca 1382

                                                      
Query: 459  cggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
            ||||||| ||||||||||| | ||||||||| ||||||||||
Sbjct: 1381 cggcgtcaatgccctgcactgcgatcctgccatccgtgtaga 1340
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>gb|AY107894.1| Zea mays PCO107975 mRNA sequence
          Length = 988

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 282 tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 341
           ||||||||||||| || |||||||| |||||||| ||||  ||||||| |  |||||| |
Sbjct: 534 tctactggcagcttgcgaatcgcgaccgctgaccgaagagcccagccacttggcacgtcg 475

                                              
Query: 342 cctccaacagcttgcctcgccggagcttgctcttc 376
           |||| |||| ||||||||||||||||||| |||||
Sbjct: 474 cctctaacaacttgcctcgccggagcttgatcttc 440



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                         
Query: 455 agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
           ||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 361 agcacggcgtcgatgccctgcacggagatcctgccgtcggtgtaga 316
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>gb|AY104390.1| Zea mays PCO107974 mRNA sequence
          Length = 745

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                         
Query: 455 agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
           ||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 355 agcacggcgtcgatgccctgcacggagatcctgccgtcggtgtaga 310
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>ref|XM_476698.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1902

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 455  agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
            ||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 1305 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtaga 1260
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>ref|XM_506171.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1714_H10.127 mRNA
          Length = 1913

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 455  agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
            ||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 1317 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtaga 1272
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                             
Query: 455     agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
               ||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 3291792 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtaga 3291747



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 51       aacaatttcttcttcttcct 70
                ||||||||||||||||||||
Sbjct: 21994454 aacaatttcttcttcttcct 21994435
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>dbj|AK098844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000B24, full
            insert sequence
          Length = 1902

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 455  agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
            ||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 1305 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtaga 1260
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>dbj|AK065047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I08, full
            insert sequence
          Length = 1915

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                          
Query: 455  agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
            ||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 1317 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtaga 1272
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>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1714_H10
          Length = 191580

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                            
Query: 455    agcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
              ||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct: 101485 agcacggcgtcgatgccctgcacggagatcctcccgtcggtgtaga 101440
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>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
              sequence
          Length = 145507

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                           
Query: 448    cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtc 492
              ||||| |||||||||||| ||||||||||| ||||||||||||||
Sbjct: 129544 cgggaacagcacggcgtcaatgccctgcactgagatcctgccgtc 129588



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                   
Query: 448    cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
              ||||| |||||||||||| ||||||||||| | ||||||||| ||||||||||
Sbjct: 107320 cgggaacagcacggcgtcaatgccctgcactgcgatcctgccatccgtgtaga 107372



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                          
Query: 282    tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 341
              ||||||||||||| || |||||| |||||||||| | || ||||||||||  ||||||||
Sbjct: 105586 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 105645

                               
Query: 342    cctccaacagcttgcct 358
              | || |||| |||||||
Sbjct: 105646 cttctaacaacttgcct 105662
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 448      cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtc 492
                ||||| |||||||||||| ||||||||||| ||||||||||||||
Sbjct: 32477416 cgggaacagcacggcgtcaatgccctgcactgagatcctgccgtc 32477460



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                     
Query: 448      cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
                ||||| |||||||||||| ||||||||||| | ||||||||| ||||||||||
Sbjct: 32455192 cgggaacagcacggcgtcaatgccctgcactgcgatcctgccatccgtgtaga 32455244



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                            
Query: 282      tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 341
                ||||||||||||| || |||||| |||||||||| | || ||||||||||  ||||||||
Sbjct: 32453458 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 32453517

                                 
Query: 342      cctccaacagcttgcct 358
                | || |||| |||||||
Sbjct: 32453518 cttctaacaacttgcct 32453534



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 261      tcttcctccatccttccttcttcta 285
                |||||||||||||| ||||||||||
Sbjct: 23474914 tcttcctccatcctcccttcttcta 23474938



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 60       ttcttcttccttgggcacac 79
                ||||||||||||||||||||
Sbjct: 25305094 ttcttcttccttgggcacac 25305075
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                             
Query: 448      cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtc 492
                ||||| |||||||||||| ||||||||||| ||||||||||||||
Sbjct: 32567926 cgggaacagcacggcgtcaatgccctgcactgagatcctgccgtc 32567970



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                     
Query: 448      cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtccgtgtaga 500
                ||||| |||||||||||| ||||||||||| | ||||||||| ||||||||||
Sbjct: 32545702 cgggaacagcacggcgtcaatgccctgcactgcgatcctgccatccgtgtaga 32545754



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                            
Query: 282      tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 341
                ||||||||||||| || |||||| |||||||||| | || ||||||||||  ||||||||
Sbjct: 32543968 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 32544027

                                 
Query: 342      cctccaacagcttgcct 358
                | || |||| |||||||
Sbjct: 32544028 cttctaacaacttgcct 32544044



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 261      tcttcctccatccttccttcttcta 285
                |||||||||||||| ||||||||||
Sbjct: 23467942 tcttcctccatcctcccttcttcta 23467966



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 60       ttcttcttccttgggcacac 79
                ||||||||||||||||||||
Sbjct: 25396403 ttcttcttccttgggcacac 25396384
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>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete
             sequence
          Length = 119134

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                          
Query: 448   cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtc 492
             ||||| |||||||||||| ||||||||||| ||||||||||||||
Sbjct: 10865 cgggaacagcacggcgtcaatgccctgcactgagatcctgccgtc 10909
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>dbj|AK073842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067C09, full
            insert sequence
          Length = 1820

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                         
Query: 448  cgggagcagcacggcgtcgatgccctgcaccgagatcctgccgtc 492
            ||||| |||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1363 cgggaacagcacggcgtcaatgccctgcactgagatcctgccgtc 1319
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>gb|AY112540.1| Zea mays CL33472_1 mRNA sequence
          Length = 452

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 282 tctactggcagctcgctaatcgcgatcgctgacccaaga 320
           |||||||||||||||| ||||||||||||||||| ||||
Sbjct: 383 tctactggcagctcgcgaatcgcgatcgctgaccgaaga 421
to top
>gb|AY541627.1| Leiognathus elongatus from Japan cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial
          Length = 632

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 261 tcttcctccatccttccttcttctactggca 291
           |||||| |||||||| |||||||||||||||
Sbjct: 252 tcttcccccatcctttcttcttctactggca 282
to top
>gb|AY666511.1| Piranga olivacea voucher 1B-1258 cytochrome oxidase subunit 1 (COI)
           gene, partial cds; mitochondrial
          Length = 659

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 262 cttcctccatccttccttcttctact 287
           ||||| ||||||||||||||||||||
Sbjct: 228 cttcccccatccttccttcttctact 253
to top
>gb|AC110898.7| Mus musculus chromosome 18, clone RP24-114C6, complete sequence
          Length = 161778

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 261    tcttcctccatccttccttctt 282
              ||||||||||||||||||||||
Sbjct: 127023 tcttcctccatccttccttctt 127044
to top
>gb|AY275859.1| Cypseloides rutilus cytochrome oxidase subunit I (COI) gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 384

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 262 cttcctccatccttccttcttctact 287
           |||||||||||||||||||| |||||
Sbjct: 316 cttcctccatccttccttctcctact 341
to top
>emb|AL596094.2| Human DNA sequence from clone RP11-318E3 on chromosome 10 Contains the
             3' end of gene FLJ20360 (KIAA2006 FLJ34073 FLJ12904
             FLJ23361 FLJ21109), the GDI2 gene for GDP dissociation
             inhibitor 2, the 3' end of a novel gene, a ribosomal
             protein L12 (RPL12) pseudogene and a CpG island, complete
             sequence
          Length = 107480

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 57    ttcttcttcttccttgggcacaccaa 82
             |||||||||||||||||| |||||||
Sbjct: 23231 ttcttcttcttccttgggaacaccaa 23256
to top
>gb|AF391350.1| Stiphodon elegans cytochrome c oxidase subunit I gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 1551

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 261 tcttcctccatccttccttcttctactggc 290
           |||||||||||| ||||||||||| |||||
Sbjct: 309 tcttcctccatcattccttcttcttctggc 338
to top
>gb|AF460846.1| Cynocephalus variegatus mitochondrion, complete genome
          Length = 16781

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 262  cttcctccatccttccttcttctact 287
            ||||||||||||||||| ||||||||
Sbjct: 5667 cttcctccatccttcctacttctact 5692
to top
>emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in linkage group 19,
             complete sequence
          Length = 168515

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 250   atgagatcaaatcttcctccat 271
             ||||||||||||||||||||||
Sbjct: 91569 atgagatcaaatcttcctccat 91590
to top
>emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on chromosome X, complete
             sequence
          Length = 196568

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 261   tcttcctccatccttccttctt 282
             ||||||||||||||||||||||
Sbjct: 42363 tcttcctccatccttccttctt 42342
to top
>gb|AF165496.1| Ortalis canicollis cytochrome oxidase subunit I (COI) gene, partial
           cds; mitochondrial
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 262 cttcctccatccttccttcttctactggc 290
           ||||| |||||||||||||| ||||||||
Sbjct: 148 cttcccccatccttccttctcctactggc 176
to top
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete
              sequence
          Length = 144383

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 261    tcttcctccatccttccttcttcta 285
              |||||||||||||| ||||||||||
Sbjct: 107343 tcttcctccatcctcccttcttcta 107319
to top
>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence
          Length = 198281

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 114    tccacagtagtataatagtaa 134
              |||||||||||||||||||||
Sbjct: 151331 tccacagtagtataatagtaa 151351
to top
>emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chromosome 9 Contains the
             3' end of a novel gene, complete sequence
          Length = 188357

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 47    tataaacaatttcttcttctt 67
             |||||||||||||||||||||
Sbjct: 53440 tataaacaatttcttcttctt 53460
to top
>gb|AC122587.5| Rattus norvegicus  BAC CH230-173H6 (Children's Hospital Oakland
            Research Institute Rat (BN/SsNHsd/MCW) BAC library)
            complete sequence
          Length = 202972

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 260  atcttcctccatccttccttcttct 284
            |||||||||| ||||||||||||||
Sbjct: 7672 atcttcctccttccttccttcttct 7648
to top
>gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, complete sequence
          Length = 112187

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   aaatcttcctccatccttcct 278
             |||||||||||||||||||||
Sbjct: 79059 aaatcttcctccatccttcct 79039
to top
>gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chromosome unknown,
            complete sequence
          Length = 172935

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 258  aaatcttcctccatccttcct 278
            |||||||||||||||||||||
Sbjct: 1746 aaatcttcctccatccttcct 1726
to top
>gb|AC161820.5| Pan troglodytes BAC clone CH251-502M7 from chromosome unknown, complete
             sequence
          Length = 169869

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 258   aaatcttcctccatccttcct 278
             |||||||||||||||||||||
Sbjct: 21705 aaatcttcctccatccttcct 21725
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 260      atcttcctccatccttccttcttct 284
                ||||||||||||||| |||||||||
Sbjct: 10810832 atcttcctccatcctcccttcttct 10810808



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 261      tcttcctccatccttccttc 280
                ||||||||||||||||||||
Sbjct: 12458489 tcttcctccatccttccttc 12458508



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 261     tcttcctccatccttccttcttct 284
               ||||||||| ||||||||||||||
Sbjct: 5152952 tcttcctccttccttccttcttct 5152929



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 261     tcttcctccatccttccttcttct 284
               ||||||||| ||||||||||||||
Sbjct: 5144191 tcttcctccttccttccttcttct 5144168
to top
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 260   atcttcctccatccttccttcttct 284
             ||||||||||||||| |||||||||
Sbjct: 34555 atcttcctccatcctcccttcttct 34531
to top
>gb|AF036942.1|AF036942 Gallus gallus photoreceptor guanylate cyclase 1 (GC1) mRNA, partial
           cds
          Length = 3672

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 445 ctccgggagcagcacggcgtc 465
           |||||||||||||||||||||
Sbjct: 144 ctccgggagcagcacggcgtc 124
to top
>dbj|AB034825.1| Diplophos taenia mitochondrial DNA, complete genome
          Length = 16418

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 262  cttcctccatccttccttcttctactggc 290
            |||||||| |||||||||||||| |||||
Sbjct: 5778 cttcctccctccttccttcttctcctggc 5806
to top
>ref|NM_124782.1| Arabidopsis thaliana unknown protein AT5G54030 mRNA, complete cds
          Length = 1260

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 55  atttcttcttcttccttgggcaca 78
           |||||||||||||||| |||||||
Sbjct: 785 atttcttcttcttcctcgggcaca 762
to top
>gb|AY666413.1| Bombycilla garrulus voucher 1B-2754 cytochrome oxidase subunit 1
           (COI) gene, partial cds; mitochondrial
          Length = 656

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 262 cttcctccatccttccttct 281
           ||||||||||||||||||||
Sbjct: 225 cttcctccatccttccttct 244
to top
>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence
          Length = 244565

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    aaatcttcctccatccttcc 277
              ||||||||||||||||||||
Sbjct: 128670 aaatcttcctccatccttcc 128689
to top
>ref|XM_450393.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 261 tcttcctccatccttccttcttct 284
           ||||||||| ||||||||||||||
Sbjct: 405 tcttcctccttccttccttcttct 382
to top
>gb|AC103637.11| Mus musculus chromosome 3, clone RP24-376O20, complete sequence
          Length = 120487

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   cttcctccatccttccttct 281
             ||||||||||||||||||||
Sbjct: 32148 cttcctccatccttccttct 32167
to top
>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence
          Length = 205378

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ttcctccatccttccttctt 282
              ||||||||||||||||||||
Sbjct: 106033 ttcctccatccttccttctt 106014
to top
>gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosome 5, complete sequence
          Length = 215766

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    tcttcctccatccttccttc 280
              ||||||||||||||||||||
Sbjct: 180685 tcttcctccatccttccttc 180704
to top
>gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, complete sequence
          Length = 214765

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    caatcatgagatcaaatctt 264
              ||||||||||||||||||||
Sbjct: 207321 caatcatgagatcaaatctt 207340
to top
>gb|AC139377.4| Mus musculus chromosome 5 clone RP24-291G12, complete sequence
          Length = 191100

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 261  tcttcctccatccttccttc 280
            ||||||||||||||||||||
Sbjct: 5311 tcttcctccatccttccttc 5330
to top
>gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, complete sequence
          Length = 215786

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   tcttcctccatccttccttc 280
             ||||||||||||||||||||
Sbjct: 35082 tcttcctccatccttccttc 35063
to top
>gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, complete sequence
          Length = 165330

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tcaaatcttcctccatcctt 275
             ||||||||||||||||||||
Sbjct: 73963 tcaaatcttcctccatcctt 73982
to top
>gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosome 3, complete sequence
          Length = 171593

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    cttcctccatccttccttct 281
              ||||||||||||||||||||
Sbjct: 145755 cttcctccatccttccttct 145774
to top
>gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, complete sequence
          Length = 139884

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 245    caatcatgagatcaaatctt 264
              ||||||||||||||||||||
Sbjct: 119170 caatcatgagatcaaatctt 119189
to top
>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence
          Length = 264425

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    aaatcttcctccatccttcc 277
              ||||||||||||||||||||
Sbjct: 224212 aaatcttcctccatccttcc 224193
to top
>emb|BX664742.15| Zebrafish DNA sequence from clone DKEY-193L3 in linkage group 8, complete
              sequence
          Length = 215608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     aacaatttcttcttcttcct 70
              ||||||||||||||||||||
Sbjct: 195853 aacaatttcttcttcttcct 195834
to top
>emb|AL157787.11| Human DNA sequence from clone RP11-328K1 on chromosome 10, complete
             sequence
          Length = 102198

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   cttcctccatccttccttct 281
             ||||||||||||||||||||
Sbjct: 83746 cttcctccatccttccttct 83765
to top
>gb|AC133859.4| Oryza sativa chromosome 3 BAC OSJNBa0075A22 genomic sequence, complete
              sequence
          Length = 152828

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 60     ttcttcttccttgggcacac 79
              ||||||||||||||||||||
Sbjct: 138266 ttcttcttccttgggcacac 138285
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 80      caacaaccaccagttttaca 99
               ||||||||||||||||||||
Sbjct: 4013273 caacaaccaccagttttaca 4013292
to top
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 460   ggcgtcgatgccctgcaccg 479
             ||||||||||||||||||||
Sbjct: 42176 ggcgtcgatgccctgcaccg 42195
to top
>emb|CR786582.5| Zebrafish DNA sequence from clone DKEYP-14C8 in linkage group 13,
              complete sequence
          Length = 194339

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     aacaatttcttcttcttcct 70
              ||||||||||||||||||||
Sbjct: 172042 aacaatttcttcttcttcct 172061
to top
>gb|AC090149.6| Homo sapiens chromosome 8, clone RP11-429M12, complete sequence
          Length = 159476

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ttcctccatccttccttctt 282
              ||||||||||||||||||||
Sbjct: 158004 ttcctccatccttccttctt 157985
to top
>dbj|AP008932.1| Rhodococcus erythropolis PR4 plasmid pREC1, complete sequence
          Length = 104014

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   agcacagccccgccgtcacc 216
             ||||||||||||||||||||
Sbjct: 33452 agcacagccccgccgtcacc 33433
to top
>gb|AC090575.11| Homo sapiens chromosome 8, clone RP11-480D6, complete sequence
          Length = 159531

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ttcctccatccttccttctt 282
              ||||||||||||||||||||
Sbjct: 158001 ttcctccatccttccttctt 157982
to top
>gb|AC037450.6| Homo sapiens chromosome 8, clone RP11-226G12, complete sequence
          Length = 169876

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   ttcctccatccttccttctt 282
             ||||||||||||||||||||
Sbjct: 58726 ttcctccatccttccttctt 58745
to top
>gb|AC097512.2| Homo sapiens BAC clone RP11-412P11 from 4, complete sequence
          Length = 149282

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    acagcaaacaatatcatgga 173
              ||||||||||||||||||||
Sbjct: 116546 acagcaaacaatatcatgga 116565
to top
>gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome 9, complete sequence
          Length = 147109

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   tcttcctccatccttccttc 280
             ||||||||||||||||||||
Sbjct: 27684 tcttcctccatccttccttc 27703
to top
>gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosome 9, complete sequence
          Length = 213468

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 261   tcttcctccatccttccttc 280
             ||||||||||||||||||||
Sbjct: 31524 tcttcctccatccttccttc 31505
to top
>gb|AC008654.5|AC008654 Homo sapiens chromosome 5 clone CTB-191B18, complete sequence
          Length = 63760

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 45    agtataaacaatttcttcttcttc 68
             ||||||||||||||||| ||||||
Sbjct: 48017 agtataaacaatttctttttcttc 47994
to top
>gb|DP000030.1| Sus scrofa target 116 genomic scaffold
          Length = 380805

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 257    caaatcttcctccatccttccttc 280
              ||||||||||||| ||||||||||
Sbjct: 332405 caaatcttcctccttccttccttc 332382
to top
>gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5, complete sequence
          Length = 193960

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 45    agtataaacaatttcttcttcttc 68
             ||||||||||||||||| ||||||
Sbjct: 92815 agtataaacaatttctttttcttc 92792
to top
>gb|AC141557.5| Homo sapiens 12 BAC CTD-2318O12 (Cal Tech Human BAC Library D)
            complete sequence
          Length = 18318

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 262  cttcctccatccttccttct 281
            ||||||||||||||||||||
Sbjct: 3860 cttcctccatccttccttct 3841
to top
>gb|AF391378.1| Amblygobius phalaena isolate 2 cytochrome c oxidase subunit I gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 261 tcttcctccatccttccttcttct 284
           |||||| |||||||||||||||||
Sbjct: 309 tcttcccccatccttccttcttct 332
to top
>gb|AF391372.1| Xenisthmus sp. CET-2001 cytochrome c oxidase subunit I gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 268 ccatccttccttcttctactggca 291
           ||||||||||||||||| ||||||
Sbjct: 316 ccatccttccttcttcttctggca 339
to top
>gb|AF391367.1| Mogurnda adspersa cytochrome c oxidase subunit I gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 268 ccatccttccttcttctactggca 291
           ||||||||||||||||| ||||||
Sbjct: 316 ccatccttccttcttcttctggca 339
to top
>gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 162572

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 262   cttcctccatccttccttct 281
             ||||||||||||||||||||
Sbjct: 64810 cttcctccatccttccttct 64829
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 459     cggcgtcgatgccctgcacc 478
               ||||||||||||||||||||
Sbjct: 5422037 cggcgtcgatgccctgcacc 5422018
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>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1008E06
          Length = 170228

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 261    tcttcctccatccttccttcttct 284
              ||||||||| ||||||||||||||
Sbjct: 155069 tcttcctccttccttccttcttct 155046



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 261    tcttcctccatccttccttcttct 284
              ||||||||| ||||||||||||||
Sbjct: 146308 tcttcctccttccttccttcttct 146285
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>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0013G11
          Length = 151405

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    aacaatttcttcttcttcct 70
             ||||||||||||||||||||
Sbjct: 86498 aacaatttcttcttcttcct 86479
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>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0599F09
          Length = 157415

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 261    tcttcctccatccttccttc 280
              ||||||||||||||||||||
Sbjct: 124073 tcttcctccatccttccttc 124092
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>emb|BX324200.5| Mouse DNA sequence from clone RP23-382H2 on chromosome 2, complete
              sequence
          Length = 180530

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    cttcctccatccttccttct 281
              ||||||||||||||||||||
Sbjct: 171968 cttcctccatccttccttct 171949
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>dbj|AB007644.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19P17
          Length = 73840

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    atttcttcttcttccttgggcaca 78
             |||||||||||||||| |||||||
Sbjct: 66197 atttcttcttcttcctcgggcaca 66220
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>gb|AC002476.1|AC002476 Human PAC clone RP1-318C15 from Xq23, complete sequence
          Length = 147102

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    tcctatacacagaagatctt 36
             ||||||||||||||||||||
Sbjct: 66142 tcctatacacagaagatctt 66123
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>gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complete sequence
          Length = 250542

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 257    caaatcttcctccatccttc 276
              ||||||||||||||||||||
Sbjct: 101590 caaatcttcctccatccttc 101609
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>dbj|AK063538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-C03, full
           insert sequence
          Length = 1705

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 261 tcttcctccatccttccttcttct 284
           ||||||||| ||||||||||||||
Sbjct: 405 tcttcctccttccttccttcttct 382
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>dbj|AK061510.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G01, full
           insert sequence
          Length = 1102

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  aacaatttcttcttcttcct 70
           ||||||||||||||||||||
Sbjct: 915 aacaatttcttcttcttcct 896
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>emb|AJ544610.1|TRU544610 Takifugu rubripes dmd gene for putative dystrophin, exons 21-34
          Length = 20816

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tcttcctccatccttccttc 280
            ||||||||||||||||||||
Sbjct: 5498 tcttcctccatccttccttc 5479
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>gb|AC164438.3| Mus musculus BAC clone RP23-62L19 from chromosome 9, complete sequence
          Length = 205793

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    ttcctccatccttccttctt 282
              ||||||||||||||||||||
Sbjct: 122009 ttcctccatccttccttctt 121990
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>dbj|AB241052.1| Distoechurus pennatus mitochondrial DNA, complete genome
          Length = 16775

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 262  cttcctccatccttccttct 281
            ||||||||||||||||||||
Sbjct: 5684 cttcctccatccttccttct 5703
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>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence
          Length = 129237

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   caatcatgagatcaaatctt 264
             ||||||||||||||||||||
Sbjct: 70112 caatcatgagatcaaatctt 70093
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>emb|AL450397.19| Mouse DNA sequence from clone RP23-100G16 on chromosome X, complete
              sequence
          Length = 228645

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    tcttcctccatccttccttc 280
              ||||||||||||||||||||
Sbjct: 138759 tcttcctccatccttccttc 138740
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>dbj|AB021880.1| Balanus amphitrite bcs-5 mRNA, complete cds
          Length = 3030

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 437 ttgtcgtcctccgggagcagcacg 460
           |||||||||||| |||||||||||
Sbjct: 638 ttgtcgtcctcccggagcagcacg 615


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,231,583
Number of Sequences: 3902068
Number of extensions: 5231583
Number of successful extensions: 158887
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 158077
Number of HSP's gapped (non-prelim): 808
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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