Clone Name | rbart18a10 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK119661.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B01, full insert sequence Length = 1067 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Minus Query: 364 gctcagttgctccggctgctccggaaggagccgagcgccttgatggccgccgcccggagg 423 ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 837 gctcagttgctggggctgctccggaaggagcccagcgccttgatggctgccgcccggagg 778 Query: 424 atgtactggtggtacgccgccgccgccagcgctccgacgaacgg 467 ||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 777 atgtactggtgatacgccgccgccgccagcgctccgatgaacgg 734
>emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0093G06, complete sequence Length = 127420 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Plus Query: 364 gctcagttgctccggctgctccggaaggagccgagcgccttgatggccgccgcccggagg 423 ||||||||||| || |||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 90998 gctcagttgctggggttgctccggaaggagcccagcgccttgatggctgccgcccggagg 91057 Query: 424 atgtactggtggtacgccgccgccgccagcgctccgacgaacgg 467 ||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 91058 atgtactggtgatacgccgccgccgccagcgctccgatgaacgg 91101
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Plus Query: 364 gctcagttgctccggctgctccggaaggagccgagcgccttgatggccgccgcccggagg 423 ||||||||||| || |||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 8906689 gctcagttgctggggttgctccggaaggagcccagcgccttgatggctgccgcccggagg 8906748 Query: 424 atgtactggtggtacgccgccgccgccagcgctccgacgaacgg 467 ||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 8906749 atgtactggtgatacgccgccgccgccagcgctccgatgaacgg 8906792
>dbj|AK102155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086E18, full insert sequence Length = 1308 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Minus Query: 364 gctcagttgctccggctgctccggaaggagccgagcgccttgatggccgccgcccggagg 423 ||||||||||| || |||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 950 gctcagttgctggggttgctccggaaggagcccagcgccttgatggctgccgcccggagg 891 Query: 424 atgtactggtggtacgccgccgccgccagcgctccgacgaacgg 467 ||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 890 atgtactggtgatacgccgccgccgccagcgctccgatgaacgg 847
>dbj|AK061491.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B05, full insert sequence Length = 1309 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Minus Query: 364 gctcagttgctccggctgctccggaaggagccgagcgccttgatggccgccgcccggagg 423 ||||||||||| || |||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 944 gctcagttgctggggttgctccggaaggagcccagcgccttgatggctgccgcccggagg 885 Query: 424 atgtactggtggtacgccgccgccgccagcgctccgacgaacgg 467 ||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 884 atgtactggtgatacgccgccgccgccagcgctccgatgaacgg 841
>dbj|AK061312.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B10, full insert sequence Length = 1296 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Minus Query: 364 gctcagttgctccggctgctccggaaggagccgagcgccttgatggccgccgcccggagg 423 ||||||||||| || |||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 938 gctcagttgctggggttgctccggaaggagcccagcgccttgatggctgccgcccggagg 879 Query: 424 atgtactggtggtacgccgccgccgccagcgctccgacgaacgg 467 ||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 878 atgtactggtgatacgccgccgccgccagcgctccgatgaacgg 835
>ref|XM_475029.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 849 Score = 147 bits (74), Expect = 4e-32 Identities = 95/102 (93%) Strand = Plus / Minus Query: 366 tcagttgctccggctgctccggaaggagccgagcgccttgatggccgccgcccggaggat 425 ||||||||| || |||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 849 tcagttgctggggttgctccggaaggagcccagcgccttgatggctgccgcccggaggat 790 Query: 426 gtactggtggtacgccgccgccgccagcgctccgacgaacgg 467 ||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 789 gtactggtgatacgccgccgccgccagcgctccgatgaacgg 748
>gb|AF326492.1|AF326492 Zea mays plasma membrane integral protein ZmPIP2-2 mRNA, complete cds Length = 1268 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 990 tgctcctgaaggagccgagagccttgatggcgcccgcccggaggatgtactggtggta 933
>gb|AF326491.1|AF326491 Zea mays plasma membrane integral protein ZmPIP2-1 mRNA, complete cds Length = 1171 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| |||||||||||| | ||||||||||||||||||||||| Sbjct: 937 tgctcctgaaggagccgagggccttgatggccccagcccggaggatgtactggtggta 880
>gb|AY109332.1| Zea mays CL502_5 mRNA sequence Length = 1969 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 1640 tgctcctgaaggagccgagagccttgatggcgcccgcccggaggatgtactggtggta 1583
>gb|BT016583.1| Zea mays clone Contig416 mRNA sequence Length = 1348 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 918 tgctcctgaaggagccgagggccttgatggcgccagcccggaggatgtactggtggta 861
>gb|AY243801.1| Zea mays aquaporin (PIP2-1) mRNA, complete cds Length = 1133 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 866 tgctcctgaaggagccgagggccttgatggcgccagcccggaggatgtactggtggta 809
>gb|AF062393.1|AF062393 Oryza sativa aquaporin (PIP2a) mRNA, complete cds Length = 1328 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| ||||||||||| | ||||||||||||||||||||||| Sbjct: 962 tgctcctgaaggagccgagggccttgatggcgccggcccggaggatgtactggtggta 905
>ref|NM_187092.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1242 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 972 tgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggtggta 915
>ref|XM_507363.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1257 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 974 tgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggtggta 917
>ref|XM_506304.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117 mRNA Length = 1298 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 975 tgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggtggta 918
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 15355846 tgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggtggta 15355789 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctggtggtacgccgccgccg 448 |||||||||||||||||||| Sbjct: 17089609 ctggtggtacgccgccgccg 17089590 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctggtggtacgccgccgccg 448 |||||||||||||||||||| Sbjct: 17084110 ctggtggtacgccgccgccg 17084091
>dbj|AB029446.1| Oryza sativa (indica cultivar-group) rwc-2 mRNA for water channel protein, partial cds Length = 880 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 538 tgctcctgaaggagccgagggccttgatggggccggcccggaggatgtactggtggta 481
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 62845 tgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggtggta 62788
>gb|AF139814.1|AF139814 Triticum aestivum plasma membrane intrinsic protein 1 (PIP1) mRNA, complete cds Length = 1283 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| ||||||||||| | |||| |||||||||||||||||| Sbjct: 939 tgctcctgaaggagccgagggccttgatggcgccggccctgaggatgtactggtggta 882
>dbj|AK119656.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H04, full insert sequence Length = 1216 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 972 tgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggtggta 915
>dbj|AK105524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G02, full insert sequence Length = 1451 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 566 tgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggtggta 509
>dbj|AK103970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B05, full insert sequence Length = 1242 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 972 tgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggtggta 915
>dbj|AK072519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128K12, full insert sequence Length = 1298 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| |||||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 975 tgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggtggta 918
>dbj|AK103938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G03, full insert sequence Length = 1257 Score = 60.0 bits (30), Expect = 7e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 380 tgctccggaaggagccgagcgccttgatggccgccgcccggaggatgtactggtggta 437 |||||| || ||||||||| || |||||||| | ||||||||||||||||||||||| Sbjct: 974 tgctcctgagggagccgagggctttgatggcgccggcccggaggatgtactggtggta 917
>gb|AC130821.3| Mus musculus BAC clone RP23-205K12 from chromosome 13, complete sequence Length = 227411 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatgcatgcac 224 ||||||||||| ||||||||||||||| Sbjct: 27546 ctctctctctctctcacatgcatgcac 27520
>gb|AC123043.2| Mus musculus BAC clone RP24-547G7 from 13, complete sequence Length = 230940 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcac 224 ||||||||||| ||||||||||||||| Sbjct: 58625 ctctctctctctctcacatgcatgcac 58651
>gb|AC025571.20| Homo sapiens 3 BAC RP11-515C21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 159902 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 208 cactcacatgcatgcacagacac 230 ||||||||||||||||||||||| Sbjct: 66965 cactcacatgcatgcacagacac 66987
>gb|AC135388.2| Homo sapiens 12 BAC RP11-474D1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 85801 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 199 tctctctctcactcacatgcatg 221 ||||||||||||||||||||||| Sbjct: 62582 tctctctctcactcacatgcatg 62560
>emb|AL663027.9| Mouse DNA sequence from clone RP23-16P3 on chromosome 2, complete sequence Length = 219778 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcac 224 ||||||||||| ||||||||||||||| Sbjct: 70575 ctctctctctctctcacatgcatgcac 70601
>gb|AC102081.15| Mus musculus chromosome 18, clone RP23-43H5, complete sequence Length = 245125 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 200 ctctctctcactcacatgcatgcaca 225 ||||||||||| |||||||||||||| Sbjct: 44586 ctctctctcacacacatgcatgcaca 44561
>ref|XM_844281.1| PREDICTED: Canis familiaris similar to cytochrome P450, family 26, subfamily A, polypeptide 1 isoform 2, transcript variant 2 (LOC486804), mRNA Length = 1583 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 439 gccgccgccgccagcgctccga 460 |||||||||||||||||||||| Sbjct: 62 gccgccgccgccagcgctccga 41
>gb|AC139757.4| Mus musculus BAC clone RP23-440H11 from chromosome 18, complete sequence Length = 193847 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 200 ctctctctcactcacatgcatgcaca 225 ||||||||||| |||||||||||||| Sbjct: 183892 ctctctctcacacacatgcatgcaca 183867
>emb|BX005408.12| Zebrafish DNA sequence from clone DKEY-156H23 in linkage group 9, complete sequence Length = 210207 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgca 219 |||||||||||||||||||||| Sbjct: 33711 ctctctctctcactcacatgca 33732
>gb|AC093010.7| Homo sapiens 3 BAC RP11-553L6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161077 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 199 tctctctctcactcacatgcatgcac 224 |||||||||| ||||||||||||||| Sbjct: 127879 tctctctctctctcacatgcatgcac 127854
>emb|CT573039.4| Wallaby DNA sequence from clone MEKBa-403O8, complete sequence Length = 76601 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatgcatgcacagacact 231 ||||||||||| || |||||||||||||||||| Sbjct: 41060 ctctctctctctttctcatgcatgcacagacact 41027
>emb|AL953877.5| Zebrafish DNA sequence from clone CH211-188M3, complete sequence Length = 152080 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatgca 219 |||||||||||||||||||||| Sbjct: 19947 ctctctctctcactcacatgca 19926
>ref|XM_550578.1| Oryza sativa (japonica cultivar-group), mRNA Length = 882 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 426 gtactggtggtacgccgccgccgcc 450 ||||||| ||||||||||||||||| Sbjct: 12 gtactggaggtacgccgccgccgcc 36
>gb|AC009152.8| Homo sapiens chromosome 16 clone RP11-567P19, complete sequence Length = 171127 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 201 tctctctcactcacatgcatgcaca 225 |||||||||| |||||||||||||| Sbjct: 28808 tctctctcacacacatgcatgcaca 28784
>emb|CR974470.7| L.saxatilis DNA sequence from clone CH317-148L22, complete sequence Length = 112797 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 202 ctctctcactcacatgcatgcacagacac 230 ||||||| |||||||||||||||| |||| Sbjct: 48282 ctctctctctcacatgcatgcacacacac 48310
>gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome 1, complete sequence Length = 179626 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcacagacac 230 |||||||||| |||||||||||||||| |||| Sbjct: 88427 ctctctctctttctcacatgcatgcacacacac 88459
>gb|AC117221.3| Mus musculus BAC clone RP23-347F2 from 1, complete sequence Length = 194077 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcacagacac 230 |||||||||| |||||||||||||||| |||| Sbjct: 190912 ctctctctctttctcacatgcatgcacacacac 190944
>emb|CR391949.7| Zebrafish DNA sequence from clone CH211-149B20 in linkage group 9, complete sequence Length = 162252 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 12 gcatgcatatgcatcacacaa 32 ||||||||||||||||||||| Sbjct: 122433 gcatgcatatgcatcacacaa 122413
>emb|AL355602.11| Human DNA sequence from clone RP5-1166F10 on chromosome 1 Contains the 3' end of a novel gene (FLJ36179), complete sequence Length = 99163 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 207 tcactcacatgcatgcacagacact 231 |||||||||| |||||||||||||| Sbjct: 79173 tcactcacatacatgcacagacact 79197
>gb|AC157275.2| Mus musculus BAC clone RP24-164M6 from chromosome 12, complete sequence Length = 175123 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 atatgcatcacacaataaatt 38 ||||||||||||||||||||| Sbjct: 76013 atatgcatcacacaataaatt 76033
>gb|AC074105.3| Oryza sativa chromosome 10 clone OSJNBa0030B02, complete sequence Length = 146836 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cacgcatgcatatgcatcaca 29 ||||||||||||||||||||| Sbjct: 118698 cacgcatgcatatgcatcaca 118718
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 438 cgccgccgccgccagcgctcc 458 ||||||||||||||||||||| Sbjct: 1747487 cgccgccgccgccagcgctcc 1747467
>gb|AC153923.4| Mus musculus 6 BAC RP23-82I13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 248275 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 tggtggcctctctctctcactcaca 215 |||||| |||||||||||||||||| Sbjct: 242521 tggtggtctctctctctcactcaca 242545
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cacgcatgcatatgcatcaca 29 ||||||||||||||||||||| Sbjct: 2791922 cacgcatgcatatgcatcaca 2791942
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 426 gtactggtggtacgccgccgccgcc 450 ||||||| ||||||||||||||||| Sbjct: 1454544 gtactggaggtacgccgccgccgcc 1454568 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctggtggtacgccgccgccg 448 |||||||||||||||||||| Sbjct: 13780848 ctggtggtacgccgccgccg 13780829 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 cgccgccgccgccagcgctc 457 |||||||||||||||||||| Sbjct: 12763260 cgccgccgccgccagcgctc 12763241 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ggtggtacgccgccgccgcc 450 |||||||||||||||||||| Sbjct: 1286443 ggtggtacgccgccgccgcc 1286462 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ggtggtacgccgccgccgcc 450 |||||||||||||||||||| Sbjct: 1275146 ggtggtacgccgccgccgcc 1275165
>gb|AC068120.6| Homo sapiens BAC clone RP11-12E9 from 2, complete sequence Length = 104268 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcacagacac 230 |||||| ||| ||||||||||||||||| |||| Sbjct: 39921 ctctctttcttactcacatgcatgcacacacac 39953
>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0038F22 Length = 101666 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 426 gtactggtggtacgccgccgccgcc 450 ||||||| ||||||||||||||||| Sbjct: 61830 gtactggaggtacgccgccgccgcc 61854
>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0425F02 Length = 176979 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 426 gtactggtggtacgccgccgccgcc 450 ||||||| ||||||||||||||||| Sbjct: 163083 gtactggaggtacgccgccgccgcc 163107
>gb|U57045.1|CAU57045 Cebus apella gamma globin (gamma2) gene, complete cds Length = 3609 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatgcatgcacagacac 230 ||||||||| ||| |||||||||||||| |||| Sbjct: 2487 ctctctctcacacacacatgcatgcacacacac 2455
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 cacgcatgcatatgcatcaca 29 ||||||||||||||||||||| Sbjct: 2791873 cacgcatgcatatgcatcaca 2791893
>emb|AL935192.10| Zebrafish DNA sequence from clone CH211-252B2, complete sequence Length = 192649 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcacagacac 230 |||||||||||||||||| |||||||| |||| Sbjct: 25752 ctctctctctcactcacaaacatgcacacacac 25784
>emb|AL591544.30| Mouse DNA sequence from clone RP23-386D6 on chromosome 11, complete sequence Length = 201673 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 tcacatgcatgcacagacact 231 ||||||||||||||||||||| Sbjct: 42516 tcacatgcatgcacagacact 42536 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcaca 225 ||||||||||||| ||||||||| |||| Sbjct: 177474 ctctctctctcacacacatgcatacaca 177501
>emb|AL591892.4| Mouse DNA sequence from clone RP23-422F22 on chromosome 15, complete sequence Length = 113798 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatgcatgcacagacac 230 ||||||||||||| |||| ||||||||| |||| Sbjct: 65102 ctctctctctcacgcacacgcatgcacacacac 65070
>gb|AC162177.2| Mus musculus BAC clone RP24-159F5 from chromosome 9, complete sequence Length = 148915 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 gcatgcatatgcatcacaca 31 |||||||||||||||||||| Sbjct: 131370 gcatgcatatgcatcacaca 131351
>ref|NM_193436.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 4317 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ggtggtacgccgccgccgcc 450 |||||||||||||||||||| Sbjct: 34 ggtggtacgccgccgccgcc 53
>gb|U14635.1| Caenorhabditis elegans cosmid C27H5, complete sequence Length = 35840 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatg 217 |||||||||||||||||||| Sbjct: 417 ctctctctctcactcacatg 436
>gb|AC106834.9| Mus musculus chromosome 19, clone RP24-132H7, complete sequence Length = 177277 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 cacatgcatgcacagacactgaac 235 |||||||||||||| ||||||||| Sbjct: 133853 cacatgcatgcacacacactgaac 133830
>gb|AC099594.6| Mus musculus chromosome 15, clone RP23-458G7, complete sequence Length = 220242 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 cactcacatgcatgcacagacact 231 |||||||||||||||||| ||||| Sbjct: 80533 cactcacatgcatgcacacacact 80510
>gb|AC148980.6| Mus musculus BAC clone RP23-230C16 from chromosome 7, complete sequence Length = 192433 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ctcactcacatgcatgcaca 225 |||||||||||||||||||| Sbjct: 116770 ctcactcacatgcatgcaca 116751
>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence Length = 245390 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 cacatgcatgcacagacactgaac 235 |||||||||||||| ||||||||| Sbjct: 46326 cacatgcatgcacacacactgaac 46303
>gb|AC117118.4| Rattus norvegicus 1 BAC CH230-161O8 (Children's Hospital Oakland Research Institute) complete sequence Length = 216036 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatg 221 ||||||||||| |||||||||||| Sbjct: 72795 ctctctctctctctcacatgcatg 72818
>emb|AJ865188.1| Cocos nucifera microsatellite DNA, clone CnCir 86 Length = 205 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatgcatgcaca 225 ||||||||||||| ||||||||||||| Sbjct: 70 ctctctctctcacagacatgcatgcaca 43
>gb|AC132474.3| Mus musculus BAC clone RP23-114G13 from chromosome 9, complete sequence Length = 220976 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 tctctctcactcacatgcatgcac 224 |||||||| ||||||||||||||| Sbjct: 28813 tctctctctctcacatgcatgcac 28836
>gb|AC124502.4| Mus musculus BAC clone RP23-414G6 from chromosome 19, complete sequence Length = 219212 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ctcactcacatgcatgcaca 225 |||||||||||||||||||| Sbjct: 125201 ctcactcacatgcatgcaca 125182
>gb|AC011352.6| Homo sapiens chromosome 5 clone CTC-327F10, complete sequence Length = 166644 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 212 cacatgcatgcacagacactgaac 235 |||||||||||||| ||||||||| Sbjct: 86180 cacatgcatgcacacacactgaac 86203
>gb|AC155171.7| Mus musculus BAC clone RP23-100A10 from chromosome 7, complete sequence Length = 193027 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctcactcacatgcatgcaca 225 |||||||||||||||||||| Sbjct: 182495 ctcactcacatgcatgcaca 182514
>gb|AC139045.7| Mus musculus chromosome 7, clone RP23-466H15, complete sequence Length = 186309 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 ctctctcactcacatgcatgcaca 225 ||||||||| |||||||||||||| Sbjct: 11443 ctctctcacacacatgcatgcaca 11466
>emb|AL590395.4| Human DNA sequence from clone RP11-390H11 on chromosome 6, complete sequence Length = 154747 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 tctctctcactcacatgcatgcac 224 |||||||| ||||||||||||||| Sbjct: 151524 tctctctccctcacatgcatgcac 151547
>emb|AL512424.14| Human DNA sequence from clone RP11-453E2 on chromosome 10 Contains the 5' end of the SLIT1 gene for slit homolog 1 (Drosophila), a novel gene and a CpG island, complete sequence Length = 172510 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 tggaggagcagtactgccaa 273 |||||||||||||||||||| Sbjct: 39310 tggaggagcagtactgccaa 39329
>emb|AL163542.8| Human DNA sequence from clone RP11-360I23 on chromosome 13 Contains part of the DACH gene for dachshund homolog (Drosophila) (DACH1 FLJ10138), complete sequence Length = 177037 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 199 tctctctctcactcacatgcatgcacagacac 230 |||||||||||| |||| ||||||||||||| Sbjct: 92144 tctctctctcacacacacacatgcacagacac 92175
>emb|AL096708.34|HS1179L24 Human DNA sequence from clone RP5-1179L24 on chromosome 6q24.3-25.3 Contains the PPP1R14C gene for protein phosphatase 1 regulatory (inhibitor) subunit 14C (KEPI NY-BR-81 CPI17-like), complete sequence Length = 107104 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ctcactcacatgcatgcaca 225 |||||||||||||||||||| Sbjct: 32888 ctcactcacatgcatgcaca 32869
>emb|AL031119.1|HS28C20 Human DNA sequence from clone RP1-28C20 on chromosome 6q24 Contains the 3' end of a variant of the EPM2A gene for progressive myoclonus type 2 epilepsy (Lafora disease) protein (laforin) and a BTB/POZ domain zinc finger protein pseudogene, complete sequence Length = 115835 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 tgcatgcacagacactgaac 235 |||||||||||||||||||| Sbjct: 106284 tgcatgcacagacactgaac 106265
>emb|BX465220.18| Zebrafish DNA sequence from clone CH211-226O13 in linkage group 21, complete sequence Length = 209782 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cctctctctctcactcacat 216 |||||||||||||||||||| Sbjct: 204706 cctctctctctcactcacat 204687
>emb|CR407571.9| Zebrafish DNA sequence from clone CH211-140C16 in linkage group 1, complete sequence Length = 161017 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatg 217 |||||||||||||||||||| Sbjct: 113233 ctctctctctcactcacatg 113214
>emb|BX664605.15| Zebrafish DNA sequence from clone DKEYP-53E4 in linkage group 21, complete sequence Length = 170126 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 cctctctctctcactcacat 216 |||||||||||||||||||| Sbjct: 159073 cctctctctctcactcacat 159092
>emb|BX296567.23| Zebrafish DNA sequence from clone DKEY-261P22 in linkage group 15, complete sequence Length = 224041 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cctctctctctcactcacat 216 |||||||||||||||||||| Sbjct: 119128 cctctctctctcactcacat 119109
>emb|BX649516.8| Zebrafish DNA sequence from clone DKEY-51D8 in linkage group 14, complete sequence Length = 209974 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 cctctctctctcactcacat 216 |||||||||||||||||||| Sbjct: 204899 cctctctctctcactcacat 204918
>emb|BX649556.9| Zebrafish DNA sequence from clone DKEY-29M1 in linkage group 11, complete sequence Length = 197002 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 cctctctctctcactcacat 216 |||||||||||||||||||| Sbjct: 30478 cctctctctctcactcacat 30497
>gb|AF407166.1| Homo sapiens PKC-potentiated PP1 inhibitory protein (KEPI) gene, complete cds Length = 168856 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 ctcactcacatgcatgcaca 225 |||||||||||||||||||| Sbjct: 94640 ctcactcacatgcatgcaca 94621
>gb|AC127352.5| Mus musculus BAC clone RP23-81P4 from chromosome 7, complete sequence Length = 196031 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctcactcacatgcatgcaca 225 |||||||||||||||||||| Sbjct: 142442 ctcactcacatgcatgcaca 142461
>dbj|AB193040.1| Nicotiana tabacum NtTOM3 mRNA for tobamovirus multiplication 3, complete cds Length = 1122 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 ggtggtacgccgccgccgcc 450 |||||||||||||||||||| Sbjct: 152 ggtggtacgccgccgccgcc 133
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 ggtggtacgccgccgccgcc 450 |||||||||||||||||||| Sbjct: 20882888 ggtggtacgccgccgccgcc 20882869 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 ggtggtacgccgccgccgcc 450 |||||||||||||||||||| Sbjct: 20873565 ggtggtacgccgccgccgcc 20873546
>gb|AC068294.26|AC068294 Mus musculus 3 BAC RP23-418O21 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 201750 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcaca 225 ||||||||| ||| |||||||||||||| Sbjct: 173609 ctctctctcacacacacatgcatgcaca 173636
>gb|AC012368.6| Homo sapiens BAC clone RP11-547M24 from 2, complete sequence Length = 196206 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cacatgcatgcacagacact 231 |||||||||||||||||||| Sbjct: 179733 cacatgcatgcacagacact 179714
>gb|AC102022.8| Mus musculus chromosome 8, clone RP24-67K5, complete sequence Length = 156728 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tctctctctcactcacatgc 218 |||||||||||||||||||| Sbjct: 100681 tctctctctcactcacatgc 100700
>gb|AC124476.5| Mus musculus BAC clone RP24-93F9 from chromosome 10, complete sequence Length = 169031 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 201 tctctctcactcacatgcatgcac 224 |||||||||| ||||||||||||| Sbjct: 53778 tctctctcacacacatgcatgcac 53801
>dbj|AP003902.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1110C07 Length = 173859 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 ggtggtacgccgccgccgcc 450 |||||||||||||||||||| Sbjct: 101330 ggtggtacgccgccgccgcc 101311 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 431 ggtggtacgccgccgccgcc 450 |||||||||||||||||||| Sbjct: 92007 ggtggtacgccgccgccgcc 91988
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ggtggtacgccgccgccgcc 450 |||||||||||||||||||| Sbjct: 138396 ggtggtacgccgccgccgcc 138415 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ggtggtacgccgccgccgcc 450 |||||||||||||||||||| Sbjct: 127099 ggtggtacgccgccgccgcc 127118
>dbj|AP005646.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1077E08 Length = 145275 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctggtggtacgccgccgccg 448 |||||||||||||||||||| Sbjct: 34988 ctggtggtacgccgccgccg 34969
>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0039F24 Length = 132107 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 cgccgccgccgccagcgctc 457 |||||||||||||||||||| Sbjct: 116781 cgccgccgccgccagcgctc 116762
>dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0019A05 Length = 144255 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 cgccgccgccgccagcgctc 457 |||||||||||||||||||| Sbjct: 64037 cgccgccgccgccagcgctc 64018
>dbj|AP004315.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0571D04 Length = 149302 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctggtggtacgccgccgccg 448 |||||||||||||||||||| Sbjct: 42735 ctggtggtacgccgccgccg 42716 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 ctggtggtacgccgccgccg 448 |||||||||||||||||||| Sbjct: 37236 ctggtggtacgccgccgccg 37217
>emb|AL773536.21| Mouse DNA sequence from clone RP23-186J20 on chromosome 2, complete sequence Length = 161244 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 199 tctctctctcactcacatgcatgcacagacac 230 |||||||||| |||| ||||||||||| |||| Sbjct: 13418 tctctctctctctcaaatgcatgcacacacac 13387
>emb|BX897748.11| Zebrafish DNA sequence from clone CH211-152M4 in linkage group 4, complete sequence Length = 64422 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 cactcacatgcatgcacagacact 231 |||||||||||||||||| ||||| Sbjct: 53392 cactcacatgcatgcacatacact 53369
>emb|BX664610.10| Zebrafish DNA sequence from clone DKEY-11N6 in linkage group 22, complete sequence Length = 206964 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 catggtggcctctctctctcactc 212 |||||||| ||||||||||||||| Sbjct: 145933 catggtggactctctctctcactc 145910
>emb|BX663521.10| Zebrafish DNA sequence from clone DKEYP-50F5 in linkage group 14, complete sequence Length = 179663 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cggttttacaggttcaatcc 98 |||||||||||||||||||| Sbjct: 113082 cggttttacaggttcaatcc 113101
>emb|CT025751.20| Mouse DNA sequence from clone RP24-365A12 on chromosome 9, complete sequence Length = 176584 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 gcatgcatatgcatcacaca 31 |||||||||||||||||||| Sbjct: 103303 gcatgcatatgcatcacaca 103284
>gb|AC120378.7| Mus musculus chromosome 7, clone RP24-263N3, complete sequence Length = 143396 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 ctctctcactcacatgcatgcaca 225 ||||||||| |||||||||||||| Sbjct: 38182 ctctctcacacacatgcatgcaca 38205
>emb|BX005274.11| Zebrafish DNA sequence from clone DKEY-77B9 in linkage group 19, complete sequence Length = 165012 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gttgcattaaattattggcc 358 |||||||||||||||||||| Sbjct: 80678 gttgcattaaattattggcc 80697
>emb|CT573040.5| Wallaby DNA sequence from clone MEKBa-454A14, complete sequence Length = 164317 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatgcatg 221 ||||||||||||| |||||||||| Sbjct: 66451 ctctctctctcacacacatgcatg 66428
>gb|AC164107.3| Mus musculus BAC clone RP23-461D6 from chromosome 14, complete sequence Length = 181095 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 cactcacatgcatgcacaga 227 |||||||||||||||||||| Sbjct: 125435 cactcacatgcatgcacaga 125416
>gb|AC140393.3| Mus musculus BAC clone RP24-179D17 from 14, complete sequence Length = 184279 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 cactcacatgcatgcacagacact 231 |||||||||||||||||| ||||| Sbjct: 101679 cactcacatgcatgcacacacact 101656
>emb|CR387992.11| Zebrafish DNA sequence from clone DKEY-234K24 in linkage group 1, complete sequence Length = 76732 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatg 217 |||||||||||||||||||| Sbjct: 62251 ctctctctctcactcacatg 62270
>emb|AL732614.15| Mouse DNA sequence from clone RP23-322G17 on chromosome 4, complete sequence Length = 218910 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 ctcactcacatgcatgcaca 225 |||||||||||||||||||| Sbjct: 112895 ctcactcacatgcatgcaca 112914
>emb|CT025573.9| Mouse DNA sequence from clone RP24-274P18 on chromosome 17, complete sequence Length = 210893 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 catggtggcctctctctctc 208 |||||||||||||||||||| Sbjct: 120658 catggtggcctctctctctc 120677
>gb|U80954.1| Caenorhabditis elegans cosmid T07F8, complete sequence Length = 23862 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatg 217 |||||||||||||||||||| Sbjct: 23779 ctctctctctcactcacatg 23798
>emb|AL844896.7| Mouse DNA sequence from clone RP23-356L21 on chromosome 2, complete sequence Length = 83203 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatgcatgcaca 225 ||||||||||| ||| |||||||||||| Sbjct: 55666 ctctctctctctctctcatgcatgcaca 55639
>emb|AL683809.7| Mouse DNA sequence from clone RP23-440B21 on chromosome X, complete sequence Length = 213187 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcaca 225 ||||||||||| || ||||||||||||| Sbjct: 161684 ctctctctctctctgacatgcatgcaca 161711
>emb|AL807778.10| Mouse DNA sequence from clone RP23-198G1 on chromosome 2, complete sequence Length = 203518 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatgcatg 221 ||||||||||| |||||||||||| Sbjct: 136632 ctctctctctctctcacatgcatg 136609
>emb|AL806523.14| Mouse DNA sequence from clone RP23-423O7 on chromosome 4, complete sequence Length = 217762 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcaca 225 ||||||||||| ||||||||||| |||| Sbjct: 141497 ctctctctctctctcacatgcatacaca 141524
>emb|AL669926.6| Mouse DNA sequence from clone RP23-74K21 on chromosome 2, complete sequence Length = 226854 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 208 cactcacatgcatgcacagacact 231 |||||||||||||||||| ||||| Sbjct: 145489 cactcacatgcatgcacacacact 145466
>emb|AL731789.9| Mouse DNA sequence from clone RP23-52F6 on chromosome X, complete sequence Length = 218939 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 ctctctctctcactcacatgcatgcaca 225 ||||||||||| ||| |||||||||||| Sbjct: 216397 ctctctctctctctctcatgcatgcaca 216424
>emb|AL732419.6| Mouse DNA sequence from clone RP23-228A20 on chromosome X, complete sequence Length = 194380 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 ctctctctctcactcacatgcatgcaca 225 ||||||||||| ||||||| |||||||| Sbjct: 141859 ctctctctctctctcacatacatgcaca 141832
>gb|AC166160.3| Mus musculus BAC clone RP24-86O19 from chromosome 7, complete sequence Length = 221792 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 202 ctctctcactcacatgcatgcaca 225 ||||||||| |||||||||||||| Sbjct: 32894 ctctctcacacacatgcatgcaca 32871 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,764,771 Number of Sequences: 3902068 Number of extensions: 8764771 Number of successful extensions: 211277 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 209716 Number of HSP's gapped (non-prelim): 1560 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)