>AXL2_YEAST (P38928) Protein AXL2 precursor (Suppressor of RHO3 protein 4)|
          Length = 823

 Score = 32.0 bits (71), Expect = 0.73
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = +1

Query: 106 HSPHSNNATATITTHHLSWSWPYPKVEH-ADVSGSTRAGTRYFRPWAPFALKLAPVAGST 282
           HS HS NAT+T ++HH + +  Y    + A +S ++ A T      AP AL   P A  T
Sbjct: 445 HSNHSANATSTRSSHHSTSTSSYTSSTYTAKISSTSAAATSS----APAAL---PAANKT 497

Query: 283 SS 288
           SS
Sbjct: 498 SS 499

>HXA9_HUMAN (P31269) Homeobox protein Hox-A9 (Hox-1G)|
          Length = 272

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 21/84 (25%), Positives = 33/84 (39%)
 Frame = +1

Query: 43  NFISTPLQAHGLILARAWKGEHSPHSNNATATITTHHLSWSWPYPKVEHADVSGSTRAGT 222
           +F     Q+   +   +W   H+  +N   A +  HH    + +P+   A V+ +   G 
Sbjct: 50  DFSPCSFQSKATVFGASWNPVHAAGANAVPAAVYHHHHHHPYVHPQ---APVAAAAPDG- 105

Query: 223 RYFRPWAPFALKLAPVAGSTSSEP 294
           RY R W          AG  SS P
Sbjct: 106 RYMRSWLEPTPGALSFAGLPSSRP 129

>PRDM1_MOUSE (Q60636) PR domain zinc finger protein 1 (PR domain-containing|
           protein 1) (Beta-interferon gene positive-regulatory
           domain I-binding factor) (BLIMP-1)
          Length = 856

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = -1

Query: 329 GVYGKGAYPGYAGSLLVDPATGASFNANGAHGRKYLVP 216
           G  G G+YPGYA +  + PA   S+N   AH  K+L+P
Sbjct: 414 GSEGLGSYPGYAPAPHLPPAFIPSYN---AHYPKFLLP 448

>NTRY_AZOBR (P45675) Nitrogen regulation protein ntrY homolog (EC 2.7.13.3)|
          Length = 777

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 23/80 (28%), Positives = 30/80 (37%)
 Frame = +1

Query: 52  STPLQAHGLILARAWKGEHSPHSNNATATITTHHLSWSWPYPKVEHADVSGSTRAGTRYF 231
           +TPL    L++  + +G  S        T   HH +WS    K   A       + TR  
Sbjct: 473 TTPLT---LLVRISTEGRGSGMMRGYVVTFDEHHRTWSPAQRKAAWARRRPIAASPTRVK 529

Query: 232 RPWAPFALKLAPVAGSTSSE 291
            P  P  L   P A ST  E
Sbjct: 530 NPLTPIQLSAEPCAASTLKE 549

>PRDM1_HUMAN (O75626) PR domain zinc finger protein 1 (PR domain-containing|
           protein 1) (Beta-interferon gene positive-regulatory
           domain I-binding factor) (BLIMP-1) (Positive regulatory
           domain I-binding factor 1) (PRDI-binding factor 1)
           (PRDI-BF1)
          Length = 789

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/38 (44%), Positives = 22/38 (57%)
 Frame = -1

Query: 329 GVYGKGAYPGYAGSLLVDPATGASFNANGAHGRKYLVP 216
           G  G G+YPGYA    + PA   S+N   AH  K+L+P
Sbjct: 346 GTEGLGSYPGYAPLPHLPPAFIPSYN---AHYPKFLLP 380

>AKT5_ARATH (Q9SCX5) Probable potassium channel AKT5|
          Length = 880

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +3

Query: 177 QGGACGRVGVDEGRDQVLPAVGSVRVEAGAGGRV 278
           +GGA  R G+ EG   V PA  ++  EA + G+V
Sbjct: 796 EGGASTRTGISEGVGGVYPARVTISGEASSSGKV 829

>KEX1_KLULA (P09231) KEX1 protease precursor (EC 3.4.21.-)|
          Length = 756

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +1

Query: 94  WKGEHSPHSNNATATITTHHLSWSWPYPKVEHADVS-GSTRAGTRYFRPWA 243
           WKG H P+S + +A +   + S S  Y K    D    +T  GT    P A
Sbjct: 329 WKGLHPPYSESCSAVMVVTYSSGSGNYIKTTDLDEKCSNTHGGTSAAAPLA 379

>INO80_GIBZE (Q4IL82) Putative DNA helicase INO80 (EC 3.6.1.-)|
          Length = 1904

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 10/83 (12%)
 Frame = +1

Query: 70  HGLILARAWKGEHSP----------HSNNATATITTHHLSWSWPYPKVEHADVSGSTRAG 219
           H     R+ K E+ P          HS++ T+T + +H   S P P + +  +S ST A 
Sbjct: 73  HSTFSLRSPKPEYRPPPFSSPNGHNHSHHNTSTSSANHSLQSPPRPALPNPYMSSSTGA- 131

Query: 220 TRYFRPWAPFALKLAPVAGSTSS 288
                P  P A  L P  G  SS
Sbjct: 132 -----PGGPVAPALPPPVGINSS 149

>CH601_MYCPA (P60545) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 538

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 375 EEAVAEGVGDGADDHGRKRHHH 440
           E AV +   + ADDHG   HHH
Sbjct: 517 ETAVVDKPAEEADDHGHGHHHH 538


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,102,912
Number of Sequences: 219361
Number of extensions: 1034216
Number of successful extensions: 2861
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2859
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)