ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart17h08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U73211.1|TAU73211 Triticum aestivum cold acclimation protein ... 80 7e-12
2gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
4tpe|BN000598.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 58 3e-05
5tpe|BN000599.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 52 0.002
6ref|NM_183810.1| Oryza sativa (japonica cultivar-group), predic... 48 0.025
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
8dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic D... 48 0.025
9dbj|AK109054.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
10dbj|AK108345.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
11dbj|AK068894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
12dbj|AK061371.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.025
13tpe|BN000597.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 48 0.025
14tpe|BN000541.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 48 0.025
15ref|NM_183812.1| Oryza sativa (japonica cultivar-group), predic... 46 0.100
16dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.100
17dbj|AK058883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.100
18gb|AY108615.1| Zea mays PCO132912 mRNA sequence 46 0.100
19tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 46 0.100
20ref|XM_948505.1| Theileria annulata strain Ankara hypothetical p... 44 0.39
21gb|AC010183.6| Homo sapiens 12 BAC RP11-100F15 (Roswell Park Can... 44 0.39
22dbj|AK063587.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
23gb|AY751449.1| Sorghum bicolor cultivar PI.506012 genomic sequence 42 1.6
24gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility l... 42 1.6
25emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;... 42 1.6
26gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4... 42 1.6
27emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chro... 42 1.6
28dbj|D10085.1|MUSC4C3H Mus musculus gene for complement component... 42 1.6
29ref|NM_187575.1| Oryza sativa (japonica cultivar-group), predic... 40 6.1
30ref|XM_476671.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
31ref|XM_476365.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.1
32gb|AF172282.1| Oryza sativa adh1-adh2 region 40 6.1
33gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.1
34gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.1
35gb|AC124382.4| Mus musculus BAC clone RP24-409N22 from chromosom... 40 6.1
36gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
37gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
38ref|XM_968580.1| PREDICTED: Tribolium castaneum similar to CG826... 40 6.1
39gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
40ref|NM_079137.2| Drosophila melanogaster unzipped CG3533-RA (uzi... 40 6.1
41gb|AY052139.1| Drosophila melanogaster SD09738 full length cDNA 40 6.1
42gb|AC007582.7| Drosophila melanogaster, chromosome 2R, region 60... 40 6.1
43gb|AC008383.8|AC008383 Homo sapiens chromosome 5 clone CTC-222O2... 40 6.1
44dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
45dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
46dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
47gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, r... 40 6.1
48gb|AF216935.1|AF216935 Unidentified nitrogen-fixing bacteria clo... 40 6.1
49dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
50dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
51dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
52emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on ch... 40 6.1
53dbj|AB023033.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 6.1
54dbj|AK107894.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
55gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, ... 40 6.1
56gb|AY108561.1| Zea mays PCO145588 mRNA sequence 40 6.1
57tpe|BN000662.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 6.1
58tpe|BN000661.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 6.1
59tpe|BN000630.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 6.1
60tpe|BN000629.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 6.1
61tpe|BN000626.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 6.1
62tpe|BN000564.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 6.1
63gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72... 40 6.1
64gb|AC115763.10| Mus musculus chromosome 15, clone RP23-64J7, com... 40 6.1
65gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
66emb|X07450.1|DMZIPR Drosophila mRNA for zipper protein 40 6.1 
>gb|U73211.1|TAU73211 Triticum aestivum cold acclimation protein WCOR410c (Wcor410c) mRNA,
            complete cds
          Length = 1242

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 89/102 (87%), Gaps = 10/102 (9%)
 Strand = Plus / Plus

                                                                        
Query: 193  cacctgatctacccttgta---ctatgtcacaggtttacagccatgaacgatcgatgcag 249
            |||||||||||||||||||   |||||||||||||| ||||||||||| |||||||||| 
Sbjct: 1138 cacctgatctacccttgtagtactatgtcacaggtt-acagccatgaatgatcgatgcaa 1196

                                                      
Query: 250  -----gtggcgcgtcgg-ggtgacctaggtgagatgtatgtg 285
                 |||||||||||| |||||||||||||| |||||||||
Sbjct: 1197 tgcaagtggcgcgtcggaggtgacctaggtgaaatgtatgtg 1238
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>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07,
             complete sequence
          Length = 151399

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                         
Query: 392   gatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcaccatggcgtccgc 451
             |||||| ||||| || |||||||||||||||  || ||||||||| ||||||||| | ||
Sbjct: 95469 gatctcgccgggtgggccggtgagcacgtcgaggttgcccatcttgaccatggcggcggc 95410

                  
Query: 452   gaact 456
             |||||
Sbjct: 95409 gaact 95405



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 411    gtgagcacgtcggcgtagcccatcttcaccatggcgtccgcgaact 456
              ||||||||||||  || ||||||||||||||||||| | |||||||
Sbjct: 107534 gtgagcacgtcgatgttgcccatcttcaccatggcggcggcgaact 107489



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                         
Query: 380   gcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcac 439
             |||||||||||||| ||| ||||    |||||||||||| ||| ||  ||||||||||||
Sbjct: 84379 gcagaccttcctgacctcgccggcgttcccggtgagcacctcgacgccgcccatcttcac 84320

                             
Query: 440   catggcgtccgcgaac 455
             ||| ||  ||||||||
Sbjct: 84319 catcgccgccgcgaac 84304
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                           
Query: 392     gatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcaccatggcgtccgc 451
               |||||| ||||| || |||||||||||||||  || ||||||||| ||||||||| | ||
Sbjct: 2002592 gatctcgccgggtgggccggtgagcacgtcgaggttgcccatcttgaccatggcggcggc 2002533

                    
Query: 452     gaact 456
               |||||
Sbjct: 2002532 gaact 2002528



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                             
Query: 411     gtgagcacgtcggcgtagcccatcttcaccatggcgtccgcgaact 456
               ||||||||||||  || ||||||||||||||||||| | |||||||
Sbjct: 2014657 gtgagcacgtcgatgttgcccatcttcaccatggcggcggcgaact 2014612



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                           
Query: 380     gcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcac 439
               |||||||||||||| ||| ||||    |||||||||||| ||| ||  ||||||||||||
Sbjct: 1991502 gcagaccttcctgacctcgccggcgttcccggtgagcacctcgacgccgcccatcttcac 1991443

                               
Query: 440     catggcgtccgcgaac 455
               ||| ||  ||||||||
Sbjct: 1991442 catcgccgccgcgaac 1991427
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>tpe|BN000598.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx69 gene for
            class III peroxidase 69 precursor, exons 1-2
          Length = 1108

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 392  gatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcaccatggcgtccgc 451
            |||||| ||||| || |||||||||||||||  || ||||||||| ||||||||| | ||
Sbjct: 1081 gatctcgccgggtgggccggtgagcacgtcgaggttgcccatcttgaccatggcggcggc 1022

                 
Query: 452  gaact 456
            |||||
Sbjct: 1021 gaact 1017
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>tpe|BN000599.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx70 gene for
            class III peroxidase 70 precursor, exons 1-2
          Length = 1356

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 411  gtgagcacgtcggcgtagcccatcttcaccatggcgtccgcgaact 456
            ||||||||||||  || ||||||||||||||||||| | |||||||
Sbjct: 1301 gtgagcacgtcgatgttgcccatcttcaccatggcggcggcgaact 1256
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>ref|NM_183810.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1041

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 428 gcccatcttcaccatggcgtccgcgaac 455
           ||||||||||||||||||||| ||||||
Sbjct: 906 gcccatcttcaccatggcgtcggcgaac 879
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 428      gcccatcttcaccatggcgtccgcgaac 455
                ||||||||||||||||||||| ||||||
Sbjct: 12486700 gcccatcttcaccatggcgtcggcgaac 12486673



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 428      gcccatcttcaccatggcgtccgcgaa 454
                ||||||||||||||||||||| |||||
Sbjct: 12501672 gcccatcttcaccatggcgtcggcgaa 12501646
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>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1135C02
          Length = 152306

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 428   gcccatcttcaccatggcgtccgcgaac 455
             ||||||||||||||||||||| ||||||
Sbjct: 72315 gcccatcttcaccatggcgtcggcgaac 72288



 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 428   gcccatcttcaccatggcgtccgcgaa 454
             ||||||||||||||||||||| |||||
Sbjct: 87287 gcccatcttcaccatggcgtcggcgaa 87261
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>dbj|AK109054.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E08, full
            insert sequence
          Length = 1275

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                        
Query: 380  gcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcac 439
            |||||||||||||| ||| ||||    |||||||||||| ||| ||  ||||||||||||
Sbjct: 1069 gcagaccttcctgacctcgccggcgttcccggtgagcacctcgacgccgcccatcttcac 1010

                            
Query: 440  catggcgtccgcgaac 455
            ||| ||  ||||||||
Sbjct: 1009 catcgccgccgcgaac 994
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>dbj|AK108345.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B05, full
           insert sequence
          Length = 1175

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 428 gcccatcttcaccatggcgtccgcgaac 455
           ||||||||||||||||||||| ||||||
Sbjct: 347 gcccatcttcaccatggcgtcggcgaac 374
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>dbj|AK068894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001H23, full
            insert sequence
          Length = 1382

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 428  gcccatcttcaccatggcgtccgcgaac 455
            ||||||||||||||||||||| ||||||
Sbjct: 1013 gcccatcttcaccatggcgtcggcgaac 986
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>dbj|AK061371.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-E09, full
           insert sequence
          Length = 1097

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 428 gcccatcttcaccatggcgtccgcgaac 455
           ||||||||||||||||||||| ||||||
Sbjct: 709 gcccatcttcaccatggcgtcggcgaac 682
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>tpe|BN000597.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx68 gene for
            class III peroxidase 68 precursor, exons 1-2
          Length = 1347

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                        
Query: 380  gcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcac 439
            |||||||||||||| ||| ||||    |||||||||||| ||| ||  ||||||||||||
Sbjct: 1323 gcagaccttcctgacctcgccggcgttcccggtgagcacctcgacgccgcccatcttcac 1264

                            
Query: 440  catggcgtccgcgaac 455
            ||| ||  ||||||||
Sbjct: 1263 catcgccgccgcgaac 1248
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>tpe|BN000541.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx12 gene for
            class III peroxidase 12 precursor, exons 1-3
          Length = 3928

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 428  gcccatcttcaccatggcgtccgcgaac 455
            ||||||||||||||||||||| ||||||
Sbjct: 3793 gcccatcttcaccatggcgtcggcgaac 3766
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>ref|NM_183812.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1044

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 428 gcccatcttcaccatggcgtccgcgaa 454
           ||||||||||||||||||||| |||||
Sbjct: 900 gcccatcttcaccatggcgtcggcgaa 874
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>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0537A05
          Length = 152396

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 428   gcccatcttcaccatggcgtccgcgaa 454
             ||||||||||||||||||||| |||||
Sbjct: 13282 gcccatcttcaccatggcgtcggcgaa 13256
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>dbj|AK058883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B11, full
           insert sequence
          Length = 1144

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 428 gcccatcttcaccatggcgtccgcgaa 454
           ||||||||||||||||||||| |||||
Sbjct: 699 gcccatcttcaccatggcgtcggcgaa 673
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>gb|AY108615.1| Zea mays PCO132912 mRNA sequence
          Length = 1231

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 408 ccggtgagcacgtcggcgtagcccatcttcaccatggcg 446
           |||||||||||| || || |||||||||| |||||||||
Sbjct: 929 ccggtgagcacgccgacggagcccatcttgaccatggcg 891
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>tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx13 gene for
            class III peroxidase 13 precursor, exons 1-3
          Length = 9315

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 428  gcccatcttcaccatggcgtccgcgaa 454
            ||||||||||||||||||||| |||||
Sbjct: 9171 gcccatcttcaccatggcgtcggcgaa 9145
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>ref|XM_948505.1| Theileria annulata strain Ankara hypothetical protein (TA09540)
           partial mRNA
          Length = 741

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 83  ttgttgtacctgttgtactgta 104
           ||||||||||||||||||||||
Sbjct: 228 ttgttgtacctgttgtactgta 207
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>gb|AC010183.6| Homo sapiens 12 BAC RP11-100F15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 175504

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 178   tttgcaagattgtgacacctga 199
             ||||||||||||||||||||||
Sbjct: 78997 tttgcaagattgtgacacctga 79018
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>dbj|AK063587.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A08, full
           insert sequence
          Length = 826

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 411 gtgagcacgtcggcgtagcccatcttcaccatggcgtccgcgaact 456
           ||||||||||||  || ||||||||||| ||||||| | |||||||
Sbjct: 580 gtgagcacgtcgatgttgcccatcttcagcatggcggcggcgaact 535
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>gb|AY751449.1| Sorghum bicolor cultivar PI.506012 genomic sequence
          Length = 391

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 429 cccatcttcaccatggcgtcc 449
           |||||||||||||||||||||
Sbjct: 391 cccatcttcaccatggcgtcc 371
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>gb|AF049850.1|MMHC438N12 Mus musculus major histocompatibility locus class III region:
             complement C4 (C4) and cytochrome P450 hydroxylase A
             (CYP21OH-A) genes, complete cds; slp pseudogene, complete
             sequence; NG6, SKI, and complement factor B (Bf) genes,
             complete cds; and complement factor C2 (C2) gene, partial
             cds
          Length = 149886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 320   gtacacatgtgcagatgtctg 340
             |||||||||||||||||||||
Sbjct: 14068 gtacacatgtgcagatgtctg 14048
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>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7
          Length = 348071

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 409   cggtgagcacgtcggcgtagc 429
             |||||||||||||||||||||
Sbjct: 67532 cggtgagcacgtcggcgtagc 67552
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>gb|M17440.1|MUSMHC4H2S Mus musculus complement component C4A (C4A) gene, complete cds
          Length = 17522

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 320  gtacacatgtgcagatgtctg 340
            |||||||||||||||||||||
Sbjct: 5770 gtacacatgtgcagatgtctg 5790
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>emb|CT573030.2| Mouse DNA sequence from clone RP24-100B3 on chromosome 17, complete
             sequence
          Length = 111957

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 320   gtacacatgtgcagatgtctg 340
             |||||||||||||||||||||
Sbjct: 77547 gtacacatgtgcagatgtctg 77527
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>dbj|D10085.1|MUSC4C3H Mus musculus gene for complement component C4, exon 13 and 14,
           partial cds
          Length = 1035

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 320 gtacacatgtgcagatgtctg 340
           |||||||||||||||||||||
Sbjct: 198 gtacacatgtgcagatgtctg 218
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>ref|NM_187575.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 960

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 429 cccatcttcaccatggcgtccgcgaact 456
           |||||||||||||||||| | |||||||
Sbjct: 896 cccatcttcaccatggcggcggcgaact 869
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>ref|XM_476671.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 951

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 379 tgcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttca 438
           |||||| | |||||| ||||||  ||| |||||||||||| |||  |  |||||||||||
Sbjct: 934 tgcagaacctcctgacctccccccgcgccccggtgagcacctcgatgccgcccatcttca 875

               
Query: 439 ccat 442
           ||||
Sbjct: 874 ccat 871
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>ref|XM_476365.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 387 ttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcaccatggcg 446
           ||||||||||| ||  ||| |||||||||||||||   |  || |||||||||||||| |
Sbjct: 494 ttcctgatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttcaccatggag 435

                   
Query: 447 tccgcgaa 454
           || |||||
Sbjct: 434 tcggcgaa 427
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>gb|AF172282.1| Oryza sativa adh1-adh2 region
          Length = 339485

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 64/76 (84%), Gaps = 2/76 (2%)
 Strand = Plus / Minus

                                                                         
Query: 380   gcagaccttcctgatctccccgggcggc-ccggtgagcacgtcggcgtagcccatcttca 438
             |||||| ||||||| ||| |||| |||| |||||||||||| || ||   |||||||| |
Sbjct: 53222 gcagactttcctgacctcgccgg-cggcgccggtgagcacgccgacgctccccatcttga 53164

                             
Query: 439   ccatggcgtccgcgaa 454
             |||||||||| |||||
Sbjct: 53163 ccatggcgtcggcgaa 53148
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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 227     acagccatgaacgatcgatg 246
               ||||||||||||||||||||
Sbjct: 1395347 acagccatgaacgatcgatg 1395328
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 429     cccatcttcaccatggcgtccgcgaact 456
               |||||||||||||||||| | |||||||
Sbjct: 1170547 cccatcttcaccatggcggcggcgaact 1170574
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>gb|AC124382.4| Mus musculus BAC clone RP24-409N22 from chromosome 1, complete sequence
          Length = 168354

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 173   tggaatttgcaagattgtga 192
             ||||||||||||||||||||
Sbjct: 79072 tggaatttgcaagattgtga 79053
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>gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051B13,
              complete sequence
          Length = 178000

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 64/76 (84%), Gaps = 2/76 (2%)
 Strand = Plus / Plus

                                                                          
Query: 380    gcagaccttcctgatctccccgggcggc-ccggtgagcacgtcggcgtagcccatcttca 438
              |||||| ||||||| ||| |||| |||| |||||||||||| || ||   |||||||| |
Sbjct: 167861 gcagactttcctgacctcgccgg-cggcgccggtgagcacgccgacgctccccatcttga 167919

                              
Query: 439    ccatggcgtccgcgaa 454
              |||||||||| |||||
Sbjct: 167920 ccatggcgtcggcgaa 167935
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>gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0037P04, complete sequence
          Length = 139693

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 64/76 (84%), Gaps = 2/76 (2%)
 Strand = Plus / Plus

                                                                         
Query: 380   gcagaccttcctgatctccccgggcggc-ccggtgagcacgtcggcgtagcccatcttca 438
             |||||| ||||||| ||| |||| |||| |||||||||||| || ||   |||||||| |
Sbjct: 95303 gcagactttcctgacctcgccgg-cggcgccggtgagcacgccgacgctccccatcttga 95361

                             
Query: 439   ccatggcgtccgcgaa 454
             |||||||||| |||||
Sbjct: 95362 ccatggcgtcggcgaa 95377
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>ref|XM_968580.1| PREDICTED: Tribolium castaneum similar to CG8266-PA, isoform A
           (LOC662488), mRNA
          Length = 3447

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 161 aaaacgaatcaatggaattt 180
           ||||||||||||||||||||
Sbjct: 889 aaaacgaatcaatggaattt 908
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>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08,
             complete sequence
          Length = 100986

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 429   cccatcttcaccatggcgtccgcgaact 456
             |||||||||||||||||| | |||||||
Sbjct: 74251 cccatcttcaccatggcggcggcgaact 74278
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>ref|NM_079137.2| Drosophila melanogaster unzipped CG3533-RA (uzip), mRNA
          Length = 2475

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   tgttgttgtacctgttgtac 100
            ||||||||||||||||||||
Sbjct: 1782 tgttgttgtacctgttgtac 1801
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>gb|AY052139.1| Drosophila melanogaster SD09738 full length cDNA
          Length = 2494

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   tgttgttgtacctgttgtac 100
            ||||||||||||||||||||
Sbjct: 1782 tgttgttgtacctgttgtac 1801
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>gb|AC007582.7| Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone
              BACR17E16, complete sequence
          Length = 180162

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     tgttgttgtacctgttgtac 100
              ||||||||||||||||||||
Sbjct: 163258 tgttgttgtacctgttgtac 163239
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>gb|AC008383.8|AC008383 Homo sapiens chromosome 5 clone CTC-222O22, complete sequence
          Length = 209114

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    tgcagatgtctgaatttggg 348
              ||||||||||||||||||||
Sbjct: 115383 tgcagatgtctgaatttggg 115402
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 64/76 (84%), Gaps = 2/76 (2%)
 Strand = Plus / Plus

                                                                           
Query: 380     gcagaccttcctgatctccccgggcggc-ccggtgagcacgtcggcgtagcccatcttca 438
               |||||| ||||||| ||| |||| |||| |||||||||||| || ||   |||||||| |
Sbjct: 5622743 gcagactttcctgacctcgccgg-cggcgccggtgagcacgccgacgctccccatcttga 5622801

                               
Query: 439     ccatggcgtccgcgaa 454
               |||||||||| |||||
Sbjct: 5622802 ccatggcgtcggcgaa 5622817
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                           
Query: 379     tgcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttca 438
               |||||| | |||||| ||||||  ||| |||||||||||| |||  |  |||||||||||
Sbjct: 3094964 tgcagaacctcctgacctccccccgcgccccggtgagcacctcgatgccgcccatcttca 3094905

                   
Query: 439     ccat 442
               ||||
Sbjct: 3094904 ccat 3094901



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                           
Query: 379     tgcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttca 438
               |||||| | |||||| ||||||  ||| |||||||||||| |||  |  |||||||||||
Sbjct: 3049720 tgcagaacctcctgacctccccccgcgccccggtgagcacctcgatgccgcccatcttca 3049661

                   
Query: 439     ccat 442
               ||||
Sbjct: 3049660 ccat 3049657



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                          
Query: 387    ttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcaccatggcg 446
              ||||||||||| ||  ||| |||||||||||||||   |  || |||||||||||||| |
Sbjct: 236079 ttcctgatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttcaccatggag 236020

                      
Query: 447    tccgcgaa 454
              || |||||
Sbjct: 236019 tcggcgaa 236012
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 429     cccatcttcaccatggcgtccgcgaact 456
               |||||||||||||||||| | |||||||
Sbjct: 1170545 cccatcttcaccatggcggcggcgaact 1170572
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>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone
              BACR08I14, complete sequence
          Length = 190616

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     tgttgttgtacctgttgtac 100
              ||||||||||||||||||||
Sbjct: 189685 tgttgttgtacctgttgtac 189704
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>gb|AF216935.1|AF216935 Unidentified nitrogen-fixing bacteria clone F3 dinitrogenase
           reductase (nifH) gene, partial cds
          Length = 417

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 417 acgtcggcgtagcccatctt 436
           ||||||||||||||||||||
Sbjct: 215 acgtcggcgtagcccatctt 196
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>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446F04
          Length = 175390

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                         
Query: 387   ttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcaccatggcg 446
             ||||||||||| ||  ||| |||||||||||||||   |  || |||||||||||||| |
Sbjct: 70943 ttcctgatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttcaccatggag 70884

                     
Query: 447   tccgcgaa 454
             || |||||
Sbjct: 70883 tcggcgaa 70876
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>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0455F03
          Length = 158201

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 379  tgcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttca 438
            |||||| | |||||| ||||||  ||| |||||||||||| |||  |  |||||||||||
Sbjct: 9954 tgcagaacctcctgacctccccccgcgccccggtgagcacctcgatgccgcccatcttca 9895

                
Query: 439  ccat 442
            ||||
Sbjct: 9894 ccat 9891
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>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0024L18
          Length = 150128

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                          
Query: 379    tgcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttca 438
              |||||| | |||||| ||||||  ||| |||||||||||| |||  |  |||||||||||
Sbjct: 141019 tgcagaacctcctgacctccccccgcgccccggtgagcacctcgatgccgcccatcttca 140960

                  
Query: 439    ccat 442
              ||||
Sbjct: 140959 ccat 140956



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                         
Query: 379   tgcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttca 438
             |||||| | |||||| ||||||  ||| |||||||||||| |||  |  |||||||||||
Sbjct: 95775 tgcagaacctcctgacctccccccgcgccccggtgagcacctcgatgccgcccatcttca 95716

                 
Query: 439   ccat 442
             ||||
Sbjct: 95715 ccat 95712
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>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete
              sequence
          Length = 195733

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 5      gtgcacaattccaatctcatgagt 28
              |||||||||||||| |||||||||
Sbjct: 109235 gtgcacaattccaaactcatgagt 109258
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>dbj|AB023033.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K6M13
          Length = 77129

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 49   aaaaaataactccatgacac 68
            ||||||||||||||||||||
Sbjct: 9256 aaaaaataactccatgacac 9237
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>dbj|AK107894.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E12, full
           insert sequence
          Length = 744

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                       
Query: 387 ttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcaccatggcg 446
           ||||||||||| ||  ||| |||||||||||||||   |  || |||||||||||||| |
Sbjct: 494 ttcctgatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttcaccatggag 435

                   
Query: 447 tccgcgaa 454
           || |||||
Sbjct: 434 tcggcgaa 427
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>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome
          Length = 791654

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 30     acaaaataatgctgaagcgaaaaaataa 57
              |||||||| ||||||| |||||||||||
Sbjct: 676459 acaaaatattgctgaaacgaaaaaataa 676486
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>gb|AY108561.1| Zea mays PCO145588 mRNA sequence
          Length = 783

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 428 gcccatcttcaccatggcgtccgcgaac 455
           |||||||||||||||||| || ||||||
Sbjct: 582 gcccatcttcaccatggcatcggcgaac 555
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>tpe|BN000662.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx133 gene for
            class III peroxidase 133 precursor, exons 1-4
          Length = 1438

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 64/76 (84%), Gaps = 2/76 (2%)
 Strand = Plus / Minus

                                                                        
Query: 380  gcagaccttcctgatctccccgggcggc-ccggtgagcacgtcggcgtagcccatcttca 438
            |||||| ||||||| ||| |||| |||| |||||||||||| || ||   |||||||| |
Sbjct: 1423 gcagactttcctgacctcgccgg-cggcgccggtgagcacgccgacgctccccatcttga 1365

                            
Query: 439  ccatggcgtccgcgaa 454
            |||||||||| |||||
Sbjct: 1364 ccatggcgtcggcgaa 1349
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>tpe|BN000661.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx132 gene for
            class III peroxidase 132 precursor, exons 1-4
          Length = 1438

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 64/76 (84%), Gaps = 2/76 (2%)
 Strand = Plus / Minus

                                                                        
Query: 380  gcagaccttcctgatctccccgggcggc-ccggtgagcacgtcggcgtagcccatcttca 438
            |||||| ||||||| ||| |||| |||| |||||||||||| || ||   |||||||| |
Sbjct: 1423 gcagactttcctgacctcgccgg-cggcgccggtgagcacgccgacgctccccatcttga 1365

                            
Query: 439  ccatggcgtccgcgaa 454
            |||||||||| |||||
Sbjct: 1364 ccatggcgtcggcgaa 1349
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>tpe|BN000630.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx101 gene for
            class III peroxidase 101 precursor, exons 1-2
          Length = 1131

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 379  tgcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttca 438
            |||||| | |||||| ||||||  ||| |||||||||||| |||  |  |||||||||||
Sbjct: 1114 tgcagaacctcctgacctccccccgcgccccggtgagcacctcgatgccgcccatcttca 1055

                
Query: 439  ccat 442
            ||||
Sbjct: 1054 ccat 1051
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>tpe|BN000629.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx100 gene for
            class III peroxidase 100 precursor, exons 1-2
          Length = 1131

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 379  tgcagaccttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttca 438
            |||||| | |||||| ||||||  ||| |||||||||||| |||  |  |||||||||||
Sbjct: 1114 tgcagaacctcctgacctccccccgcgccccggtgagcacctcgatgccgcccatcttca 1055

                
Query: 439  ccat 442
            ||||
Sbjct: 1054 ccat 1051
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>tpe|BN000626.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx97 gene for
            class III peroxidase 97 precursor, exons 1-2
          Length = 1107

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                        
Query: 387  ttcctgatctccccgggcggcccggtgagcacgtcggcgtagcccatcttcaccatggcg 446
            ||||||||||| ||  ||| |||||||||||||||   |  || |||||||||||||| |
Sbjct: 1082 ttcctgatctcgccctgcgccccggtgagcacgtcaatggtgctcatcttcaccatggag 1023

                    
Query: 447  tccgcgaa 454
            || |||||
Sbjct: 1022 tcggcgaa 1015
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>tpe|BN000564.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx35 gene for
           class III peroxidase 35 precursor, exons 1-2
          Length = 1031

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 429 cccatcttcaccatggcgtccgcgaact 456
           |||||||||||||||||| | |||||||
Sbjct: 967 cccatcttcaccatggcggcggcgaact 940
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>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete
              sequence
          Length = 343833

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     tgttgttgtacctgttgtac 100
              ||||||||||||||||||||
Sbjct: 341989 tgttgttgtacctgttgtac 342008
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>gb|AC115763.10| Mus musculus chromosome 15, clone RP23-64J7, complete sequence
          Length = 243676

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     gtactgtacctgtcagggtg 116
              ||||||||||||||||||||
Sbjct: 111279 gtactgtacctgtcagggtg 111298
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 64/76 (84%), Gaps = 2/76 (2%)
 Strand = Plus / Plus

                                                                           
Query: 380     gcagaccttcctgatctccccgggcggc-ccggtgagcacgtcggcgtagcccatcttca 438
               |||||| ||||||| ||| |||| |||| |||||||||||| || ||   |||||||| |
Sbjct: 5689220 gcagactttcctgacctcgccgg-cggcgccggtgagcacgccgacgctccccatcttga 5689278

                               
Query: 439     ccatggcgtccgcgaa 454
               |||||||||| |||||
Sbjct: 5689279 ccatggcgtcggcgaa 5689294
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>emb|X07450.1|DMZIPR Drosophila mRNA for zipper protein
          Length = 2471

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   tgttgttgtacctgttgtac 100
            ||||||||||||||||||||
Sbjct: 1769 tgttgttgtacctgttgtac 1788


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,268,418
Number of Sequences: 3902068
Number of extensions: 3268418
Number of successful extensions: 57002
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 56713
Number of HSP's gapped (non-prelim): 287
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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