>SSRA_ARATH (P45434) Translocon-associated protein alpha subunit precursor|
           (TRAP-alpha) (Signal sequence receptor alpha subunit)
           (SSR-alpha)
          Length = 258

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = -2

Query: 423 WAYGQVQQLSKKTKKGPKVELGTGTTDANMDEWLEGT 313
           WAY QVQ+L+KKTKK  KVE+GT +T+A++DEWLEGT
Sbjct: 207 WAYSQVQRLTKKTKKVSKVEVGTRSTEASLDEWLEGT 243

>DOF57_ARATH (Q9LSL6) Dof zinc finger protein DOF5.7 (AtDOF5.7)|
          Length = 316

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +2

Query: 23  KPHISKIKQDQNS---HR*HLPSTKLCFKKNYL*STQQGRKWCQ 145
           KP  S + QDQ +    R + P+TK C+  NY  S  Q R +C+
Sbjct: 28  KPPSSSVAQDQQNLKCPRCNSPNTKFCYYNNY--SLSQPRHFCK 69

>INT1_MOUSE (Q6P4S8) Integrator complex subunit 1 (Int1)|
          Length = 2126

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 36   LRSNKIRIPIDNIYLQQNCVSRKTICKVHSKVENGVNKMC-SQETSSNTSALSSIQVTCE 212
            L+  ++R+P+  + LQ    +  +ICK+   V   +  +  + ++ S+ S ++   + C 
Sbjct: 1744 LQRPEVRVPVPEVLLQSEGATSSSICKLDGLVHRFITLLADTSDSRSSESRVADANMACR 1803

Query: 213  GL 218
             L
Sbjct: 1804 KL 1805

>A4GAT_MOUSE (Q67BJ4) Lactosylceramide 4-alpha-galactosyltransferase (EC|
           2.4.1.228) (Alpha-1,4-galactosyltransferase)
           (UDP-galactose:beta-D-galactosyl-beta1-R
           4-alpha-D-galactosyltransferase)
           (Alpha-1,4-N-acetylglucosaminyltransferase)
           (Alpha4Gal-T1) (Glo
          Length = 359

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 9/96 (9%)
 Frame = +3

Query: 150 MCSQETSSNTSALSSIQVTCEGLPSIASF*ILKCLARPSNLESICFS-----WLCP--LQ 308
           MCS E+++     S + V  +GLP   +       A+P NL     S     W+ P  LQ
Sbjct: 101 MCSVESAARAHPESQVVVLMKGLPRDTT-------AQPRNLGISLLSCFPNVWIRPLDLQ 153

Query: 309 MLYPPATRPCWHQLFQFRVPPWGLSLFS--SRAAAL 410
            L+       W+   + R  P+ L + S  SR A L
Sbjct: 154 ELFEDTPLAAWYSEARHRWEPYQLPVLSDASRIALL 189


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,120,053
Number of Sequences: 219361
Number of extensions: 1593897
Number of successful extensions: 4141
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4140
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)