Clone Name | rbart17h07 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK060137.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E05, full insert sequence Length = 1072 Score = 276 bits (139), Expect = 7e-71 Identities = 275/317 (86%), Gaps = 5/317 (1%) Strand = Plus / Minus Query: 199 aagttacttgtgaagggctaccctccattgcctcattctagatcctgaa-atgtttagct 257 ||||||||||||||||||||||||| | || |||||||||||||||||| ||| ||| || Sbjct: 952 aagttacttgtgaagggctaccctcaactgtctcattctagatcctgaaaatgattaact 893 Query: 258 ag-gcccagcaacctcgaatctatttgtttttcttggctttgt---cctttgcaaatgct 313 || | || |||| ||||||||| || ||||||| |||| ||| ||||||||| Sbjct: 892 agagttcaagggcctccaatctatttcttcttcttggatttgcttccctgtgcaaatgca 833 Query: 314 gtaccctccagccactcgtccatgttggcatcagttgttccagttccgagttccaccttg 373 || |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 832 gtgccctccagccactcatccatgttggcatcagtagttccagttcccagttccaccttg 773 Query: 374 gggcctttctttgttttcttcgagagctgctgcacttgaccataagcccacaatcctagg 433 ||| | |||||||||||||| |||||||| || ||||||||||| ||||||||||| | | Sbjct: 772 ggggccttctttgttttctttgagagctgttgtacttgaccatatgcccacaatccgaag 713 Query: 434 agaccaagaagtgcaattccaagggtaataaggaacacagattcaacactcagtaaccct 493 ||||||||||| |||| |||||||||||||||||||||||| ||||| || ||||| ||| Sbjct: 712 agaccaagaagggcaactccaagggtaataaggaacacagactcaacgctgagtaaacct 653 Query: 494 ccaacctcaacaacctc 510 ||| ||||||||||||| Sbjct: 652 ccagcctcaacaacctc 636 Score = 40.1 bits (20), Expect = 6.9 Identities = 33/36 (91%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 114 aaagtacacagcaaggtcgaaa-atggtgtcaacaa 148 |||||||||| ||||||||||| |||||||||||| Sbjct: 1052 aaagtacacaacaaggtcgaaatttggtgtcaacaa 1017
>dbj|AK059749.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-A09, full insert sequence Length = 1164 Score = 276 bits (139), Expect = 7e-71 Identities = 275/317 (86%), Gaps = 5/317 (1%) Strand = Plus / Minus Query: 199 aagttacttgtgaagggctaccctccattgcctcattctagatcctgaa-atgtttagct 257 ||||||||||||||||||||||||| | || |||||||||||||||||| ||| ||| || Sbjct: 918 aagttacttgtgaagggctaccctcaactgtctcattctagatcctgaaaatgattaact 859 Query: 258 ag-gcccagcaacctcgaatctatttgtttttcttggctttgt---cctttgcaaatgct 313 || | || |||| ||||||||| || ||||||| |||| ||| ||||||||| Sbjct: 858 agagttcaagggcctccaatctatttcttcttcttggatttgcttccctgtgcaaatgca 799 Query: 314 gtaccctccagccactcgtccatgttggcatcagttgttccagttccgagttccaccttg 373 || |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 798 gtgccctccagccactcatccatgttggcatcagtagttccagttcccagttccaccttg 739 Query: 374 gggcctttctttgttttcttcgagagctgctgcacttgaccataagcccacaatcctagg 433 ||| | |||||||||||||| |||||||| || ||||||||||| ||||||||||| | | Sbjct: 738 ggggccttctttgttttctttgagagctgttgtacttgaccatatgcccacaatccgaag 679 Query: 434 agaccaagaagtgcaattccaagggtaataaggaacacagattcaacactcagtaaccct 493 ||||||||||| |||| |||||||||||||||||||||||| ||||| || ||||| ||| Sbjct: 678 agaccaagaagggcaactccaagggtaataaggaacacagactcaacgctgagtaaacct 619 Query: 494 ccaacctcaacaacctc 510 ||| ||||||||||||| Sbjct: 618 ccagcctcaacaacctc 602 Score = 42.1 bits (21), Expect = 1.7 Identities = 97/116 (83%), Gaps = 6/116 (5%) Strand = Plus / Minus Query: 39 agatcaaacaagatcagaattcccatagataacatttaccttcaacaaaattgtgttt-- 96 |||||||| ||||||||| || ||| ||| ||| |||||| ||||||| ||||||| Sbjct: 1098 agatcaaataagatcagagatcacatccatagcatataccttgaacaaaactgtgttttt 1039 Query: 97 caagaaaaa-ctatc-tgtaaa-gtacacagcaaggtcgaaa-atggtgtcaacaa 148 ||||||||| || || |||||| ||||||| ||||||||||| |||||||||||| Sbjct: 1038 caagaaaaaactttcatgtaaaagtacacaacaaggtcgaaatttggtgtcaacaa 983
>dbj|AK100782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120J15, full insert sequence Length = 1221 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 5/317 (1%) Strand = Plus / Minus Query: 199 aagttacttgtgaagggctaccctccattgcctcattctagatcctgaa-atgtttagct 257 ||||||||||||||||||||||||| | || |||||||||||||||||| ||| ||| || Sbjct: 975 aagttacttgtgaagggctaccctcaactgtctcattctagatcctgaaaatgattaact 916 Query: 258 ag-gcccagcaacctcgaatctatttgtttttcttggctttgt---cctttgcaaatgct 313 || | || |||| ||||||||| || ||||||| |||| ||| ||||||||| Sbjct: 915 agagttcaagggcctccaatctatttcttcttcttggatttgcttccctgtgcaaatgca 856 Query: 314 gtaccctccagccactcgtccatgttggcatcagttgttccagttccgagttccaccttg 373 || |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 855 gtgccctccagccactcatccatgttggcatcagtagttccagttcccagttccaccttg 796 Query: 374 gggcctttctttgttttcttcgagagctgctgcacttgaccataagcccacaatcctagg 433 ||| | |||||||| ||||| |||||||| || ||||||||||| ||||||||||| | | Sbjct: 795 ggggccttctttgtcttctttgagagctgttgtacttgaccatatgcccacaatccgaag 736 Query: 434 agaccaagaagtgcaattccaagggtaataaggaacacagattcaacactcagtaaccct 493 ||||||||||| |||| |||||||||||||||||||||||| ||||| || ||||| ||| Sbjct: 735 agaccaagaagggcaactccaagggtaataaggaacacagactcaacgctgagtaaacct 676 Query: 494 ccaacctcaacaacctc 510 ||| ||||||||||||| Sbjct: 675 ccagcctcaacaacctc 659 Score = 42.1 bits (21), Expect = 1.7 Identities = 97/116 (83%), Gaps = 6/116 (5%) Strand = Plus / Minus Query: 39 agatcaaacaagatcagaattcccatagataacatttaccttcaacaaaattgtgttt-- 96 |||||||| ||||||||| || ||| ||| ||| |||||| ||||||| ||||||| Sbjct: 1155 agatcaaataagatcagagatcacatccatagcatataccttgaacaaaactgtgttttt 1096 Query: 97 caagaaaaa-ctatc-tgtaaa-gtacacagcaaggtcgaaa-atggtgtcaacaa 148 ||||||||| || || |||||| ||||||| ||||||||||| |||||||||||| Sbjct: 1095 caagaaaaaactttcatgtaaaagtacacaacaaggtcgaaatttggtgtcaacaa 1040
>gb|BT016857.1| Zea mays clone Contig690 mRNA sequence Length = 1069 Score = 226 bits (114), Expect = 6e-56 Identities = 174/194 (89%) Strand = Plus / Plus Query: 317 ccctccagccactcgtccatgttggcatcagttgttccagttccgagttccaccttgggg 376 |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 273 ccctccagccactcatcgatgttggcatcagttgttccagttccgagctccaccttgggt 332 Query: 377 cctttctttgttttcttcgagagctgctgcacttgaccataagcccacaatcctaggaga 436 | |||||||||||||||||||||||||| || || ||||| ||||||||||| | ||| Sbjct: 333 gccttctttgttttcttcgagagctgctgaacctggccatatgcccacaatccaaacaga 392 Query: 437 ccaagaagtgcaattccaagggtaataaggaacacagattcaacactcagtaaccctcca 496 ||||||||||||| ||||||||| || ||||||||||| |||||||| ||||| |||||| Sbjct: 393 ccaagaagtgcaaatccaagggtgatgaggaacacagactcaacactgagtaagcctcca 452 Query: 497 acctcaacaacctc 510 ||||||||||||| Sbjct: 453 gcctcaacaacctc 466 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 199 aagttacttgtgaagggctaccctccattgcctcattctagatcct 244 |||| |||||||||||||||||||| | |||||||||||||||||| Sbjct: 152 aagtcacttgtgaagggctaccctcaaatgcctcattctagatcct 197
>gb|BT017686.1| Zea mays clone EL01N0444B10.c mRNA sequence Length = 1066 Score = 212 bits (107), Expect = 8e-52 Identities = 173/195 (88%) Strand = Plus / Minus Query: 317 ccctccagccactcgtccatgttggcatcagttgttccagttccgagttccaccttgggg 376 |||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 772 ccctccagccactcatcgatgttggcatcagttgttccagttccgagctccaccttgggg 713 Query: 377 cctttctttgttttcttcgagagctgctgcacttgaccataagcccacaatcctaggaga 436 | ||||| |||||||||||||||||||| || || ||||| ||||| ||||| | |||| Sbjct: 712 gccttcttcgttttcttcgagagctgctgaacctggccatatgcccataatccaaagaga 653 Query: 437 ccaagaagtgcaattccaagggtaataaggaacacagattcaacactcagtaaccctcca 496 |||||||| || ||||||||||| || ||||||||||| |||||||| ||||| |||||| Sbjct: 652 ccaagaagagcgattccaagggtgatgaggaacacagactcaacactgagtaagcctcca 593 Query: 497 acctcaacaacctca 511 ||||||| |||||| Sbjct: 592 gcctcaacgacctca 578 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 199 aagttacttgtgaagggctaccctccattgcctcattctagatcct 244 |||| |||||||||||||||||||| | |||||||||||||||||| Sbjct: 893 aagtcacttgtgaagggctaccctcaaatgcctcattctagatcct 848 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 125 caaggtcgaaaatggtgtcaacaa 148 |||||||||||||||||||||||| Sbjct: 977 caaggtcgaaaatggtgtcaacaa 954
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 135 bits (68), Expect = 2e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 395 gagagctgctgcacttgaccataagcccacaatcctaggagaccaagaagtgcaattcca 454 |||||||| || ||||||||||| ||||||||||| | |||||||||||| |||| |||| Sbjct: 29858010 gagagctgttgtacttgaccatatgcccacaatccgaagagaccaagaagggcaactcca 29857951 Query: 455 agggtaataaggaacacagattcaacactcagtaaccctccaacctcaacaacctc 510 |||||||||||||||||||| ||||| || ||||| |||||| ||||||||||||| Sbjct: 29857950 agggtaataaggaacacagactcaacgctgagtaaacctccagcctcaacaacctc 29857895 Score = 109 bits (55), Expect = 9e-21 Identities = 70/75 (93%) Strand = Plus / Minus Query: 318 cctccagccactcgtccatgttggcatcagttgttccagttccgagttccaccttggggc 377 ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 29858173 cctccagccactcatccatgttggcatcagtagttccagttcccagttccaccttggggg 29858114 Query: 378 ctttctttgttttct 392 | ||||||||||||| Sbjct: 29858113 ccttctttgttttct 29858099 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 199 aagttacttgtgaagggctaccctccattgcctcattctagatcctgaaa 248 ||||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 29858386 aagttacttgtgaagggctaccctcaactgtctcattctagatcctgaaa 29858337 Score = 42.1 bits (21), Expect = 1.7 Identities = 97/116 (83%), Gaps = 6/116 (5%) Strand = Plus / Minus Query: 39 agatcaaacaagatcagaattcccatagataacatttaccttcaacaaaattgtgttt-- 96 |||||||| ||||||||| || ||| ||| ||| |||||| ||||||| ||||||| Sbjct: 29858566 agatcaaataagatcagagatcacatccatagcatataccttgaacaaaactgtgttttt 29858507 Query: 97 caagaaaaa-ctatc-tgtaaa-gtacacagcaaggtcgaaa-atggtgtcaacaa 148 ||||||||| || || |||||| ||||||| ||||||||||| |||||||||||| Sbjct: 29858506 caagaaaaaactttcatgtaaaagtacacaacaaggtcgaaatttggtgtcaacaa 29858451
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 135 bits (68), Expect = 2e-28 Identities = 104/116 (89%) Strand = Plus / Minus Query: 395 gagagctgctgcacttgaccataagcccacaatcctaggagaccaagaagtgcaattcca 454 |||||||| || ||||||||||| ||||||||||| | |||||||||||| |||| |||| Sbjct: 53523 gagagctgttgtacttgaccatatgcccacaatccgaagagaccaagaagggcaactcca 53464 Query: 455 agggtaataaggaacacagattcaacactcagtaaccctccaacctcaacaacctc 510 |||||||||||||||||||| ||||| || ||||| |||||| ||||||||||||| Sbjct: 53463 agggtaataaggaacacagactcaacgctgagtaaacctccagcctcaacaacctc 53408 Score = 109 bits (55), Expect = 9e-21 Identities = 70/75 (93%) Strand = Plus / Minus Query: 318 cctccagccactcgtccatgttggcatcagttgttccagttccgagttccaccttggggc 377 ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 53686 cctccagccactcatccatgttggcatcagtagttccagttcccagttccaccttggggg 53627 Query: 378 ctttctttgttttct 392 | ||||||||||||| Sbjct: 53626 ccttctttgttttct 53612 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 199 aagttacttgtgaagggctaccctccattgcctcattctagatcctgaaa 248 ||||||||||||||||||||||||| | || ||||||||||||||||||| Sbjct: 53899 aagttacttgtgaagggctaccctcaactgtctcattctagatcctgaaa 53850 Score = 42.1 bits (21), Expect = 1.7 Identities = 97/116 (83%), Gaps = 6/116 (5%) Strand = Plus / Minus Query: 39 agatcaaacaagatcagaattcccatagataacatttaccttcaacaaaattgtgttt-- 96 |||||||| ||||||||| || ||| ||| ||| |||||| ||||||| ||||||| Sbjct: 54079 agatcaaataagatcagagatcacatccatagcatataccttgaacaaaactgtgttttt 54020 Query: 97 caagaaaaa-ctatc-tgtaaa-gtacacagcaaggtcgaaa-atggtgtcaacaa 148 ||||||||| || || |||||| ||||||| ||||||||||| |||||||||||| Sbjct: 54019 caagaaaaaactttcatgtaaaagtacacaacaaggtcgaaatttggtgtcaacaa 53964
>gb|BT018669.1| Zea mays clone EL01N0510C10.d mRNA sequence Length = 1597 Score = 81.8 bits (41), Expect = 2e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 391 cttcgagagctgctgcacttgaccataagcccacaatcctaggagaccaagaagtgcaat 450 ||||| ||||||||| ||||| ||||| ||||||||| | | |||||||||||| ||||| Sbjct: 559 cttcgcgagctgctgaacttggccatatgcccacaatacaaagagaccaagaagggcaat 500 Query: 451 tccaagggtaataaggaacacagattcaacact 483 ||||||| | | ||||||||||| |||||||| Sbjct: 499 tccaaggatgacgaggaacacagactcaacact 467
>gb|AC158139.11| Mus musculus chromosome 1, clone RP23-431H7, complete sequence Length = 201254 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 68 taacatttaccttcaacaaaattgt 92 ||||||||||||||||||||||||| Sbjct: 184716 taacatttaccttcaacaaaattgt 184740
>ref|XM_505991.1| Yarrowia lipolytica CLIB122, YALI0F28457g predicted mRNA Length = 1797 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 318 cctccagccactcgtccatgttg 340 ||||||||||||||||||||||| Sbjct: 805 cctccagccactcgtccatgttg 783
>gb|U28155.2|YLU28155 Yarrowia lipolytica intraorganellar peroxisomal translocation component Pay32p (PAY32) gene, complete cds Length = 2579 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 318 cctccagccactcgtccatgttg 340 ||||||||||||||||||||||| Sbjct: 1250 cctccagccactcgtccatgttg 1228
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 318 cctccagccactcgtccatgttg 340 ||||||||||||||||||||||| Sbjct: 3619383 cctccagccactcgtccatgttg 3619361
>emb|CT025602.8| Mouse DNA sequence from clone RP23-458L4 on chromosome 14, complete sequence Length = 207863 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cttcaacaaaattgtgtttcaagaa 102 |||||||||||| |||||||||||| Sbjct: 172543 cttcaacaaaatagtgtttcaagaa 172519
>gb|AC132282.3| Mus musculus BAC clone RP24-348O21 from chromosome 14, complete sequence Length = 166747 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 cttcaacaaaattgtgtttcaagaa 102 |||||||||||| |||||||||||| Sbjct: 89902 cttcaacaaaatagtgtttcaagaa 89878
>emb|AL023800.1|HS833B2 Human DNA sequence from clone RP5-833B2 on chromosome Xq26.1-27.2 Contains part of the FGF13 gene for fibroblast growth factor 13, complete sequence Length = 73132 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 ttctttgttttcttcgagagc 400 ||||||||||||||||||||| Sbjct: 25223 ttctttgttttcttcgagagc 25203
>emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete sequence; segment 1/4 Length = 347558 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 271 tcgaatctatttgtttttctt 291 ||||||||||||||||||||| Sbjct: 206985 tcgaatctatttgtttttctt 207005
>emb|CR457461.7| Zebrafish DNA sequence from clone DKEY-23O10 in linkage group 14, complete sequence Length = 213600 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 279 atttgtttttcttggctttgt 299 ||||||||||||||||||||| Sbjct: 8461 atttgtttttcttggctttgt 8441
>dbj|AB227667.1| Aspergillus oryzae cDNA, contig sequence: AoEST4540 Length = 1046 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 487 taaccctccaacctcaacaac 507 ||||||||||||||||||||| Sbjct: 720 taaccctccaacctcaacaac 700
>gb|AC003982.1|AC003982 Homo sapiens PAC clone 166H1 from 12q, complete sequence Length = 122302 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 ctttgtcctttgcaaatgctgtaccctcc 322 ||||| |||||||||||||||| |||||| Sbjct: 57290 ctttggcctttgcaaatgctgttccctcc 57318
>gb|AC005990.1|F5O8 Arabidopsis thaliana chromosome 1 BAC F5O8 sequence, complete sequence Length = 99923 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 87 aattgtgtttcaagaaaaactatct 111 |||||| |||||||||||||||||| Sbjct: 58439 aattgtctttcaagaaaaactatct 58463
>gb|AC107645.28| Mus musculus chromosome 15, clone RP23-78J21, complete sequence Length = 240912 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 aacatttaccttcaacaaaa 88 |||||||||||||||||||| Sbjct: 114743 aacatttaccttcaacaaaa 114724
>gb|BC054395.1| Mus musculus solute carrier family 33 (acetyl-CoA transporter), member 1, mRNA (cDNA clone MGC:62603 IMAGE:6492236), complete cds Length = 3145 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 atgttggcatcagttgttcc 354 |||||||||||||||||||| Sbjct: 2205 atgttggcatcagttgttcc 2186
>gb|AC102334.10| Mus musculus chromosome 15, clone RP24-544N15, complete sequence Length = 162721 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 475 ttcaacactcagtaaccctccaacctca 502 ||||||||||| || ||||||||||||| Sbjct: 60825 ttcaacactcaatacccctccaacctca 60798
>gb|AY434966.1| Felis catus microsatellite FCA985 sequence Length = 364 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 gggcctttctttgttttctt 393 |||||||||||||||||||| Sbjct: 336 gggcctttctttgttttctt 317
>emb|BX957236.8| Zebrafish DNA sequence from clone DKEY-178O3 in linkage group 6, complete sequence Length = 211391 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 69278 tttgtttttcttggctttgt 69259
>gb|BC063104.1| Mus musculus solute carrier family 33 (acetyl-CoA transporter), member 1, mRNA (cDNA clone MGC:70254 IMAGE:5042025), complete cds Length = 2558 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 atgttggcatcagttgttcc 354 |||||||||||||||||||| Sbjct: 2138 atgttggcatcagttgttcc 2119
>gb|AC122807.3| Mus musculus BAC clone RP23-297H3 from 8, complete sequence Length = 210372 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 86 aaattgtgtttcaagaaaaactat 109 ||||||||||||||||| |||||| Sbjct: 112966 aaattgtgtttcaagaacaactat 112989
>emb|CR361541.11| Zebrafish DNA sequence from clone DKEY-99G10 in linkage group 17, complete sequence Length = 123196 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 114828 tttgtttttcttggctttgt 114847
>ref|XM_644934.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (251.t00005) partial mRNA Length = 1068 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 tctatttgtttttcttggctttgt 299 ||||||||||||||||| |||||| Sbjct: 473 tctatttgtttttcttgactttgt 450
>ref|XM_646914.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (136.t00010) partial mRNA Length = 1146 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 tctatttgtttttcttggctttgt 299 ||||||||||||||||| |||||| Sbjct: 551 tctatttgtttttcttgactttgt 528
>gb|AC137522.11| Medicago truncatula clone mth2-9h8, complete sequence Length = 117720 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 taacatttaccttcaacaaa 87 |||||||||||||||||||| Sbjct: 63162 taacatttaccttcaacaaa 63143
>emb|BX957253.12| Zebrafish DNA sequence from clone DKEY-234L14 in linkage group 7, complete sequence Length = 197310 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 171049 tttgtttttcttggctttgt 171030
>emb|BX323049.20| Zebrafish DNA sequence from clone DKEY-30L22 in linkage group 9, complete sequence Length = 214040 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 72469 tttgtttttcttggctttgt 72450
>emb|AL627223.23| Human DNA sequence from clone RP11-184B22 on chromosome 9 Contains the 3' end of a gene for DKFZP434C212 protein (DKFZP434C212), a methylation-controlled J protein (MCJ) pseudogene, and CpG island, complete sequence Length = 91310 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 300 cctttgcaaatgctgtaccctcca 323 |||||||||||||||| ||||||| Sbjct: 74769 cctttgcaaatgctgttccctcca 74792
>gb|BC044616.1| Homo sapiens hypothetical protein LOC144486, mRNA (cDNA clone IMAGE:5267190) Length = 1963 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tatttgtttttcttggcttt 297 |||||||||||||||||||| Sbjct: 1408 tatttgtttttcttggcttt 1389
>gb|BC035086.2| Homo sapiens hypothetical protein LOC144486, mRNA (cDNA clone IMAGE:5260956) Length = 2562 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tatttgtttttcttggcttt 297 |||||||||||||||||||| Sbjct: 1407 tatttgtttttcttggcttt 1388
>emb|AL627263.6| Zebrafish DNA sequence from clone RP71-1L9 in linkage group 14 Contains part of a novel gene similar to ATP8B1 (ATPase, Class I, type 8B, member 1), part of a novel gene similar to MCF2 (MCF.2 cell line derived transforming sequence) and two CpG islands, complete sequence Length = 174521 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 71806 tttgtttttcttggctttgt 71825
>emb|AL023776.1|SPCC1494 S.pombe chromosome III cosmid c1494 Length = 31510 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 284 tttttcttggctttgtcctttgca 307 |||||||||| ||||||||||||| Sbjct: 18199 tttttcttggatttgtcctttgca 18222
>emb|CR846095.3| Zebrafish DNA sequence from clone DKEY-209E11 in linkage group 14, complete sequence Length = 50472 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 18690 tttgtttttcttggctttgt 18671
>emb|CR847543.13| Zebrafish DNA sequence from clone DKEY-183P4 in linkage group 8, complete sequence Length = 207382 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 62466 tttgtttttcttggctttgt 62447
>emb|CR450725.6| Zebrafish DNA sequence from clone CH211-5A14 in linkage group 5, complete sequence Length = 186721 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 863 tttgtttttcttggctttgt 844
>emb|BX322643.8| Zebrafish DNA sequence from clone CH211-281E1 in linkage group 21, complete sequence Length = 153972 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 75841 tttgtttttcttggctttgt 75822
>emb|BX547933.13| Zebrafish DNA sequence from clone DKEY-87L9 in linkage group 2, complete sequence Length = 177199 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 131101 tttgtttttcttggctttgt 131120
>emb|BX000701.25| Zebrafish DNA sequence from clone CH211-18I3 in linkage group 3, complete sequence Length = 181568 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 96993 tttgtttttcttggctttgt 97012
>dbj|AK057269.1| Homo sapiens cDNA FLJ32707 fis, clone TESTI2000671 Length = 2058 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tatttgtttttcttggcttt 297 |||||||||||||||||||| Sbjct: 1424 tatttgtttttcttggcttt 1405
>gb|AC149225.18| Danio rerio clone ch211-103f17, complete sequence Length = 185038 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 99766 tttgtttttcttggctttgt 99785
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 tttgcaaatgctgtaccctc 321 |||||||||||||||||||| Sbjct: 190546 tttgcaaatgctgtaccctc 190565
>dbj|AK144703.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730024P03 product:solute carrier family 33 (acetyl-CoA transporter), member 1, full insert sequence Length = 2978 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 atgttggcatcagttgttcc 354 |||||||||||||||||||| Sbjct: 2072 atgttggcatcagttgttcc 2053
>gb|AC157791.6| Mus musculus chromosome 3, clone RP24-176D22, complete sequence Length = 179897 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 atgttggcatcagttgttcc 354 |||||||||||||||||||| Sbjct: 83560 atgttggcatcagttgttcc 83579
>emb|BX548163.15| Zebrafish DNA sequence from clone CH211-135J7 in linkage group 10, complete sequence Length = 132400 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 1291 tttgtttttcttggctttgt 1272
>ref|NM_001023519.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC1494.06c), partial mRNA Length = 1788 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 tttttcttggctttgtcctttgca 307 |||||||||| ||||||||||||| Sbjct: 1124 tttttcttggatttgtcctttgca 1101
>gb|AC068779.28| Homo sapiens 12 BAC RP11-865A20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 61615 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 tatttgtttttcttggcttt 297 |||||||||||||||||||| Sbjct: 34289 tatttgtttttcttggcttt 34270
>gb|AC116732.10| Mus musculus chromosome 3, clone RP23-347F4, complete sequence Length = 187006 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 atgttggcatcagttgttcc 354 |||||||||||||||||||| Sbjct: 162282 atgttggcatcagttgttcc 162301
>emb|BX470087.8| Zebrafish DNA sequence from clone CH211-202A10 in linkage group 3, complete sequence Length = 218404 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 143823 tttgtttttcttggctttgt 143804
>emb|BX890619.6| Zebrafish DNA sequence from clone CH211-288M1, complete sequence Length = 141754 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 85463 tttgtttttcttggctttgt 85482
>dbj|AB037368.2| Mus musculus Acatn gene for acetyl-CoA transporter, complete cds Length = 7411 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 atgttggcatcagttgttcc 354 |||||||||||||||||||| Sbjct: 6819 atgttggcatcagttgttcc 6800
>gb|AC131210.3| Homo sapiens 3 BAC RP13-635I23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 182479 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 cctttgcaaatgctgtaccctcca 323 |||||||||||||||| ||||||| Sbjct: 142581 cctttgcaaatgctgttccctcca 142558
>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 92710 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 caacaaaattgtgtttcaag 100 |||||||||||||||||||| Sbjct: 9866 caacaaaattgtgtttcaag 9847
>emb|AL929053.5| Zebrafish DNA sequence from clone DKEY-21N12 in linkage group 20, complete sequence Length = 142345 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 139522 tttgtttttcttggctttgt 139503
>emb|BX248506.9| Zebrafish DNA sequence from clone DKEY-70K11 in linkage group 5, complete sequence Length = 230400 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 17952 tttgtttttcttggctttgt 17971
>emb|BX530058.4| Zebrafish DNA sequence from clone DKEYP-89D7 in linkage group 19, complete sequence Length = 199529 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 138316 tttgtttttcttggctttgt 138297
>emb|CR854846.8| Zebrafish DNA sequence from clone DKEY-228N9 in linkage group 11, complete sequence Length = 202364 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 33022 tttgtttttcttggctttgt 33003
>ref|NM_015728.3| Mus musculus solute carrier family 33 (acetyl-CoA transporter), member 1 (Slc33a1), mRNA Length = 3145 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 atgttggcatcagttgttcc 354 |||||||||||||||||||| Sbjct: 2205 atgttggcatcagttgttcc 2186
>emb|AL772150.11| Mouse DNA sequence from clone RP23-457P12 on chromosome 4, complete sequence Length = 186505 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 24284 tttgtttttcttggctttgt 24303
>emb|CT027664.2| Medicago truncatula chromosome 5 clone mth2-160e5, COMPLETE SEQUENCE Length = 146823 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 aattgtgtttcaagaaaaac 106 |||||||||||||||||||| Sbjct: 35833 aattgtgtttcaagaaaaac 35814
>gb|BC005616.1| Mus musculus solute carrier family 33 (acetyl-CoA transporter), member 1, mRNA (cDNA clone MGC:6986 IMAGE:3154886), complete cds Length = 2711 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 atgttggcatcagttgttcc 354 |||||||||||||||||||| Sbjct: 1782 atgttggcatcagttgttcc 1763
>emb|AL928954.9| Zebrafish DNA sequence from clone CH211-127D4 in linkage group 5, complete sequence Length = 222888 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 115988 tttgtttttcttggctttgt 116007
>emb|CT009618.10| Zebrafish DNA sequence from clone CH73-147E18 in linkage group 5, complete sequence Length = 71914 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tttgtttttcttggctttgt 299 |||||||||||||||||||| Sbjct: 12810 tttgtttttcttggctttgt 12829
>emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chromosome X, complete sequence Length = 123180 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 tcattctagatcctgaaatg 250 |||||||||||||||||||| Sbjct: 92744 tcattctagatcctgaaatg 92763 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,593,769 Number of Sequences: 3902068 Number of extensions: 5593769 Number of successful extensions: 116572 Number of sequences better than 10.0: 69 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 116375 Number of HSP's gapped (non-prelim): 197 length of query: 511 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 488 effective length of database: 17,143,297,704 effective search space: 8365929279552 effective search space used: 8365929279552 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)