ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart17h06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MUP5_MOUSE (P11591) Major urinary protein 5 precursor (MUP 5) 29 6.8
2ARO9_YEAST (P38840) Aromatic amino acid aminotransferase 2 (EC 2... 29 6.8

>MUP5_MOUSE (P11591) Major urinary protein 5 precursor (MUP 5)|
          Length = 180

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 188 ELLLRLCNSLDTVCLHLDEAALWRASWN 105
           +LLL LC  L  VC+H +EA+  R ++N
Sbjct: 2   KLLLLLCLELTLVCVHAEEASSERQNFN 29



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>ARO9_YEAST (P38840) Aromatic amino acid aminotransferase 2 (EC 2.6.1.-)|
           (Aromatic amino acid aminotransferase II)
          Length = 513

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = -3

Query: 148 ASTWTRPPSGAHLGILYGWTYGV----LSSELFITETLLNAW*MWIFRTA 11
           A   TR PSG    I+Y     +    LSS L + E +   W  WI + A
Sbjct: 342 ADITTRAPSGTSQAIVYSTIKAMAESNLSSSLSMKEAMFEGWIRWIMQIA 391


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,730,130
Number of Sequences: 219361
Number of extensions: 870200
Number of successful extensions: 2319
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2319
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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