ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart17h06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome... 224 2e-55
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 224 2e-55
3gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 224 2e-55
4dbj|AK101047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 5e-53
5ref|XM_476065.1| Oryza sativa (japonica cultivar-group), predic... 210 3e-51
6dbj|AK063809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 3e-48
7gb|AY107523.1| Zea mays PCO134378 mRNA sequence 159 1e-35
8ref|XM_550386.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
9gb|BT018451.1| Zea mays clone EL01N0407E11.d mRNA sequence 72 2e-09
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
11dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
12dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
13dbj|AK066179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
14dbj|AK062062.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
15gb|AY107614.1| Zea mays PCO120183 mRNA sequence 72 2e-09
16ref|NM_128126.3| Arabidopsis thaliana unknown protein AT2G25670 ... 54 4e-04
17ref|NM_179735.1| Arabidopsis thaliana unknown protein AT2G25670 ... 54 4e-04
18gb|AY150413.1| Arabidopsis thaliana unknown protein (At2g25670) ... 54 4e-04
19gb|AY065267.1| Arabidopsis thaliana unknown protein (At2g25670) ... 54 4e-04
20gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map... 54 4e-04
21emb|BX820160.1|CNS0AA1A Arabidopsis thaliana Full-length cDNA Co... 52 0.002
22emb|BX819962.1|CNS0A9E3 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
23gb|AY084947.1| Arabidopsis thaliana clone 12261 mRNA, complete s... 52 0.002
24emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14... 44 0.40
25gb|BT014205.1| Lycopersicon esculentum clone 133382F, mRNA sequence 42 1.6
26emb|AL596139.1|CNS07EGR BAC A of library A from Tetraodon nigrov... 42 1.6
27gb|U80270.1|MDU80270 Malus domestica pAFD103 mRNA, partial cds 42 1.6
28ref|NM_119413.2| Arabidopsis thaliana unknown protein AT4G32610 ... 40 6.3
29emb|CR376839.12| Zebrafish DNA sequence from clone DKEY-75G22 in... 40 6.3
30ref|XM_750048.1| Aspergillus fumigatus Af293 involucrin repeat p... 40 6.3
31gb|AC112149.4| Mus musculus BAC clone RP23-186F18 from chromosom... 40 6.3
32ref|XM_949846.1| Theileria annulata strain Ankara hypothetical p... 40 6.3
33gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, comple... 40 6.3
34gb|AC103975.9| Homo sapiens chromosome 15, clone RP11-1001M11, c... 40 6.3
35emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, ... 40 6.3
36emb|AL022537.1|ATF4D11 Arabidopsis thaliana DNA chromosome 4, BA... 40 6.3
37gb|AC171006.3| Gallus gallus BAC clone CH261-172K16 from chromos... 40 6.3
38gb|AC010609.7| Homo sapiens chromosome 5 clone CTB-4E7, complete... 40 6.3
39gb|AC009185.6|AC009185 Homo sapiens chromosome 5 clone CTC-248O1... 40 6.3
40emb|BX828404.1|CNS0A3RA Arabidopsis thaliana Full-length cDNA Co... 40 6.3
41emb|BX827788.1|CNS0A3VQ Arabidopsis thaliana Full-length cDNA Co... 40 6.3
42gb|AC171112.2| Gallus gallus BAC clone CH261-138H22 from chromos... 40 6.3
43gb|AC158807.11| Mus musculus 10 BAC RP24-64G24 (Roswell Park Can... 40 6.3
44gb|AC008389.4|AC008389 Homo sapiens chromosome 5 clone CTC-232D5... 40 6.3
45gb|BT024049.1| Zea mays clone EL01N0436D10 mRNA sequence 40 6.3
46gb|AY111914.1| Zea mays CL46471_1 mRNA sequence 40 6.3
47emb|AL935138.7| Mouse DNA sequence from clone RP23-222H15 on chr... 40 6.3 
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
             complete sequence
          Length = 145070

 Score =  224 bits (113), Expect = 2e-55
 Identities = 251/297 (84%)
 Strand = Plus / Minus

                                                                         
Query: 172   aatctgagcagcaattcaccgcaggggctgctgattatagtggttcttgtctttcttctt 231
             |||||| |||| |||||||||||  |||||||| || || ||| |||| |||||||||||
Sbjct: 99771 aatctgggcagtaattcaccgcacaggctgctggttgtaatggctcttctctttcttctt 99712

                                                                         
Query: 232   cgctgccgcaagctttgccctcctagccgccgcctcagatgctgcaatctttgctgctgc 291
             ||| || |||||||| || ||||| || || ||||||||||| |||||||||||||||| 
Sbjct: 99711 cgcagctgcaagcttcgcgctccttgctgcggcctcagatgcagcaatctttgctgctgt 99652

                                                                         
Query: 292   gtccatctctttgctcgacttctttttcttcatggatgctaccttctttatacgctcctt 351
             ||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 99651 gtccatctctttgcttgacttctttttcttcattgaggctaccttctttatacgatcctt 99592

                                                                         
Query: 352   gatatccactgaagcaacattttcatcaggttctgcatcagcagcatcgtcaaccacatt 411
             || |||||  ||||| || | ||||||||| || ||| ||||||| || || ||| ||  
Sbjct: 99591 gacatccatagaagctacctcttcatcaggctcagcaccagcagcttcttccaccccacc 99532

                                                                      
Query: 412   gttctgatccggtgtttcttctgcctcctttgaagacttggctttcttagctttctt 468
              ||  | ||| |||||||||  |||||||||| ||||||| ||||||||||||||||
Sbjct: 99531 attaagttcctgtgtttctttcgcctcctttgcagacttgtctttcttagctttctt 99475



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 41    attcaaaagggtttctgtgatgaacaattcaga 73
             |||||||||| || |||||||||||| ||||||
Sbjct: 99908 attcaaaaggtttcctgtgatgaacagttcaga 99876
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  224 bits (113), Expect = 2e-55
 Identities = 251/297 (84%)
 Strand = Plus / Minus

                                                                           
Query: 172     aatctgagcagcaattcaccgcaggggctgctgattatagtggttcttgtctttcttctt 231
               |||||| |||| |||||||||||  |||||||| || || ||| |||| |||||||||||
Sbjct: 4731766 aatctgggcagtaattcaccgcacaggctgctggttgtaatggctcttctctttcttctt 4731707

                                                                           
Query: 232     cgctgccgcaagctttgccctcctagccgccgcctcagatgctgcaatctttgctgctgc 291
               ||| || |||||||| || ||||| || || ||||||||||| |||||||||||||||| 
Sbjct: 4731706 cgcagctgcaagcttcgcgctccttgctgcggcctcagatgcagcaatctttgctgctgt 4731647

                                                                           
Query: 292     gtccatctctttgctcgacttctttttcttcatggatgctaccttctttatacgctcctt 351
               ||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 4731646 gtccatctctttgcttgacttctttttcttcattgaggctaccttctttatacgatcctt 4731587

                                                                           
Query: 352     gatatccactgaagcaacattttcatcaggttctgcatcagcagcatcgtcaaccacatt 411
               || |||||  ||||| || | ||||||||| || ||| ||||||| || || ||| ||  
Sbjct: 4731586 gacatccatagaagctacctcttcatcaggctcagcaccagcagcttcttccaccccacc 4731527

                                                                        
Query: 412     gttctgatccggtgtttcttctgcctcctttgaagacttggctttcttagctttctt 468
                ||  | ||| |||||||||  |||||||||| ||||||| ||||||||||||||||
Sbjct: 4731526 attaagttcctgtgtttctttcgcctcctttgcagacttgtctttcttagctttctt 4731470



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 41      attcaaaagggtttctgtgatgaacaattcaga 73
               |||||||||| || |||||||||||| ||||||
Sbjct: 4731903 attcaaaaggtttcctgtgatgaacagttcaga 4731871
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
            complete sequence
          Length = 187956

 Score =  224 bits (113), Expect = 2e-55
 Identities = 251/297 (84%)
 Strand = Plus / Minus

                                                                        
Query: 172  aatctgagcagcaattcaccgcaggggctgctgattatagtggttcttgtctttcttctt 231
            |||||| |||| |||||||||||  |||||||| || || ||| |||| |||||||||||
Sbjct: 4174 aatctgggcagtaattcaccgcacaggctgctggttgtaatggctcttctctttcttctt 4115

                                                                        
Query: 232  cgctgccgcaagctttgccctcctagccgccgcctcagatgctgcaatctttgctgctgc 291
            ||| || |||||||| || ||||| || || ||||||||||| |||||||||||||||| 
Sbjct: 4114 cgcagctgcaagcttcgcgctccttgctgcggcctcagatgcagcaatctttgctgctgt 4055

                                                                        
Query: 292  gtccatctctttgctcgacttctttttcttcatggatgctaccttctttatacgctcctt 351
            ||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 4054 gtccatctctttgcttgacttctttttcttcattgaggctaccttctttatacgatcctt 3995

                                                                        
Query: 352  gatatccactgaagcaacattttcatcaggttctgcatcagcagcatcgtcaaccacatt 411
            || |||||  ||||| || | ||||||||| || ||| ||||||| || || ||| ||  
Sbjct: 3994 gacatccatagaagctacctcttcatcaggctcagcaccagcagcttcttccaccccacc 3935

                                                                     
Query: 412  gttctgatccggtgtttcttctgcctcctttgaagacttggctttcttagctttctt 468
             ||  | ||| |||||||||  |||||||||| ||||||| ||||||||||||||||
Sbjct: 3934 attaagttcctgtgtttctttcgcctcctttgcagacttgtctttcttagctttctt 3878



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 41   attcaaaagggtttctgtgatgaacaattcaga 73
            |||||||||| || |||||||||||| ||||||
Sbjct: 4311 attcaaaaggtttcctgtgatgaacagttcaga 4279
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>dbj|AK101047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007J22, full
            insert sequence
          Length = 1337

 Score =  216 bits (109), Expect = 5e-53
 Identities = 250/297 (84%)
 Strand = Plus / Minus

                                                                        
Query: 172  aatctgagcagcaattcaccgcaggggctgctgattatagtggttcttgtctttcttctt 231
            |||||| |||| |||||||||||  |||||||| || || ||| |||| |||||||||||
Sbjct: 1176 aatctgggcagtaattcaccgcacaggctgctggttgtaatggctcttctctttcttctt 1117

                                                                        
Query: 232  cgctgccgcaagctttgccctcctagccgccgcctcagatgctgcaatctttgctgctgc 291
            ||| || |||||||| || ||||| || || ||||||||||| |||||||||||||||| 
Sbjct: 1116 cgcagctgcaagcttcgcgctccttgctgcggcctcagatgcagcaatctttgctgctgt 1057

                                                                        
Query: 292  gtccatctctttgctcgacttctttttcttcatggatgctaccttctttatacgctcctt 351
            ||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 1056 gtccatctctttgcttgacttctttttcttcattgaggctaccttctttatacgatcctt 997

                                                                        
Query: 352  gatatccactgaagcaacattttcatcaggttctgcatcagcagcatcgtcaaccacatt 411
            || |||||  ||||| || | ||||||||| || ||| ||||||| ||  | ||| ||  
Sbjct: 996  gacatccatagaagctacctcttcatcaggctcagcaccagcagcttctcccaccccacc 937

                                                                     
Query: 412  gttctgatccggtgtttcttctgcctcctttgaagacttggctttcttagctttctt 468
             ||  | ||| |||||||||  |||||||||| ||||||| ||||||||||||||||
Sbjct: 936  attaagttcctgtgtttctttcgcctcctttgcagacttgtctttcttagctttctt 880



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 41   attcaaaagggtttctgtgatgaacaattcaga 73
            |||||||||| || |||||||||||| ||||||
Sbjct: 1313 attcaaaaggtttcctgtgatgaacagttcaga 1281
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>ref|XM_476065.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 936

 Score =  210 bits (106), Expect = 3e-51
 Identities = 238/282 (84%)
 Strand = Plus / Minus

                                                                       
Query: 187 tcaccgcaggggctgctgattatagtggttcttgtctttcttcttcgctgccgcaagctt 246
           ||||||||  |||||||| || || ||| |||| |||||||||||||| || ||||||||
Sbjct: 936 tcaccgcacaggctgctggttgtaatggctcttctctttcttcttcgcagctgcaagctt 877

                                                                       
Query: 247 tgccctcctagccgccgcctcagatgctgcaatctttgctgctgcgtccatctctttgct 306
            || ||||| || || ||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 876 cgcgctccttgctgcggcctcagatgcagcaatctttgctgctgtgtccatctctttgct 817

                                                                       
Query: 307 cgacttctttttcttcatggatgctaccttctttatacgctccttgatatccactgaagc 366
            ||||||||||||||||| || ||||||||||||||||| ||||||| |||||  |||||
Sbjct: 816 tgacttctttttcttcattgaggctaccttctttatacgatccttgacatccatagaagc 757

                                                                       
Query: 367 aacattttcatcaggttctgcatcagcagcatcgtcaaccacattgttctgatccggtgt 426
            || | ||||||||| || ||| ||||||| || || ||| ||   ||  | ||| ||||
Sbjct: 756 tacctcttcatcaggctcagcaccagcagcttcttccaccccaccattaagttcctgtgt 697

                                                     
Query: 427 ttcttctgcctcctttgaagacttggctttcttagctttctt 468
           |||||  |||||||||| ||||||| ||||||||||||||||
Sbjct: 696 ttctttcgcctcctttgcagacttgtctttcttagctttctt 655
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>dbj|AK063809.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G08, full
           insert sequence
          Length = 447

 Score =  200 bits (101), Expect = 3e-48
 Identities = 194/225 (86%)
 Strand = Plus / Minus

                                                                       
Query: 172 aatctgagcagcaattcaccgcaggggctgctgattatagtggttcttgtctttcttctt 231
           |||||| |||| |||||||||||  |||||||| || || ||| |||| |||||||||||
Sbjct: 274 aatctgggcagtaattcaccgcacaggctgctggttgtaatggctcttctctttcttctt 215

                                                                       
Query: 232 cgctgccgcaagctttgccctcctagccgccgcctcagatgctgcaatctttgctgctgc 291
           ||| || |||||||| || ||||| || || ||||||||||| |||||||||||||||| 
Sbjct: 214 cgcagctgcaagcttcgcgctccttgctgcggcctcagatgcagcaatctttgctgctgt 155

                                                                       
Query: 292 gtccatctctttgctcgacttctttttcttcatggatgctaccttctttatacgctcctt 351
           ||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 154 gtccatctctttgcttgacttctttttcttcattgaggctaccttctttatacgatcctt 95

                                                        
Query: 352 gatatccactgaagcaacattttcatcaggttctgcatcagcagc 396
           || |||||  ||||| || | ||||||||| || ||| |||||||
Sbjct: 94  gacatccatagaagctacctcttcatcaggctcagcaccagcagc 50



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 41  attcaaaagggtttctgtgatgaacaattcaga 73
           |||||||||| || |||||||||||| ||||||
Sbjct: 411 attcaaaaggtttcctgtgatgaacagttcaga 379
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>gb|AY107523.1| Zea mays PCO134378 mRNA sequence
          Length = 887

 Score =  159 bits (80), Expect = 1e-35
 Identities = 176/208 (84%)
 Strand = Plus / Minus

                                                                       
Query: 186 ttcaccgcaggggctgctgattatagtggttcttgtctttcttcttcgctgccgcaagct 245
           |||||||||  |||||||| || |||||| |||| ||||||||||| || || |||||| 
Sbjct: 482 ttcaccgcacaggctgctggttgtagtggctcttctctttcttctttgcagcggcaagcc 423

                                                                       
Query: 246 ttgccctcctagccgccgcctcagatgctgcaatctttgctgctgcgtccatctctttgc 305
             || ||||| || || ||||| ||||| ||||||||||| || ||||||||||||||||
Sbjct: 422 gggcactcctcgctgcggcctcggatgcagcaatctttgccgcagcgtccatctctttgc 363

                                                                       
Query: 306 tcgacttctttttcttcatggatgctaccttctttatacgctccttgatatccactgaag 365
           | ||||||||||||||||| || |||||||||||||| |||||||||| |||||| || |
Sbjct: 362 ttgacttctttttcttcatcgaggctaccttctttatgcgctccttgacatccacagagg 303

                                       
Query: 366 caacattttcatcaggttctgcatcagc 393
           |   || |||||||||||||||| ||||
Sbjct: 302 ctgtatcttcatcaggttctgcaacagc 275



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 186 ttcaccgcaggggctgctgattatagtggttcttgtctttcttcttcgctgccgcaagc 244
           |||||||||  |||||||| || |||||| |||| ||||||||||| || || ||||||
Sbjct: 576 ttcaccgcacaggctgctggttgtagtggctcttctctttcttctttgcagcggcaagc 518



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 436 ctcctttgaagacttggctttcttagctttctt 468
           |||||||||||||||  ||||||||| ||||||
Sbjct: 232 ctcctttgaagacttttctttcttagatttctt 200
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>ref|XM_550386.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1557

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Minus

                                                                        
Query: 212  tggttcttgtctttcttcttcgctgccgcaagctttgccctcctagccgccgcctcagat 271
            |||||||| ||||||||||| |||||||| ||| | || ||||| || || |||||||  
Sbjct: 1302 tggttcttctctttcttcttggctgccgcgagcctagcgctccttgctgcagcctcagca 1243

                                                                        
Query: 272  gctgcaatctttgctgctgcgtccatctctttgctcgacttctttttcttcatggatgct 331
            |||||||| ||||| |||| |||   ||||||||  || |||||||||||||| || || 
Sbjct: 1242 gctgcaatttttgcagctgtgtctgactctttgcctgatttctttttcttcattgaagcc 1183

                                
Query: 332  accttctttatacgctcctt 351
            | ||||||||  ||||||||
Sbjct: 1182 atcttctttaagcgctcctt 1163
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>gb|BT018451.1| Zea mays clone EL01N0407E11.d mRNA sequence
          Length = 1370

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 138/172 (80%)
 Strand = Plus / Minus

                                                                        
Query: 189  accgcaggggctgctgattatagtggttcttgtctttcttcttcgctgccgcaagctttg 248
            |||||| ||||||||| || || ||  |||| ||||||||||| || ||||||||| |||
Sbjct: 1184 accgcacgggctgctggttgtaatgactcttttctttcttcttggccgccgcaagccttg 1125

                                                                        
Query: 249  ccctcctagccgccgcctcagatgctgcaatctttgctgctgcgtccatctctttgctcg 308
            | ||||| || || ||||| |  || ||||| || || |||| |||| ||||| ||||||
Sbjct: 1124 cactccttgctgcagcctcggcagcggcaattttggcagctgtgtccgtctctctgctcg 1065

                                                                
Query: 309  acttctttttcttcatggatgctaccttctttatacgctccttgatatccac 360
            | ||||| |||||||| ||||| | |||||| |  |||||||| | ||||||
Sbjct: 1064 atttcttcttcttcattgatgccatcttcttcaagcgctccttcacatccac 1013
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Minus

                                                                           
Query: 212     tggttcttgtctttcttcttcgctgccgcaagctttgccctcctagccgccgcctcagat 271
               |||||||| ||||||||||| |||||||| ||| | || ||||| || || |||||||  
Sbjct: 4124960 tggttcttctctttcttcttggctgccgcgagcctagcgctccttgctgcagcctcagca 4124901

                                                                           
Query: 272     gctgcaatctttgctgctgcgtccatctctttgctcgacttctttttcttcatggatgct 331
               |||||||| ||||| |||| |||   ||||||||  || |||||||||||||| || || 
Sbjct: 4124900 gctgcaatttttgcagctgtgtctgactctttgcctgatttctttttcttcattgaagcc 4124841

                                   
Query: 332     accttctttatacgctcctt 351
               | ||||||||  ||||||||
Sbjct: 4124840 atcttctttaagcgctcctt 4124821
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>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0509B06
          Length = 104515

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Minus

                                                                         
Query: 212   tggttcttgtctttcttcttcgctgccgcaagctttgccctcctagccgccgcctcagat 271
             |||||||| ||||||||||| |||||||| ||| | || ||||| || || |||||||  
Sbjct: 91703 tggttcttctctttcttcttggctgccgcgagcctagcgctccttgctgcagcctcagca 91644

                                                                         
Query: 272   gctgcaatctttgctgctgcgtccatctctttgctcgacttctttttcttcatggatgct 331
             |||||||| ||||| |||| |||   ||||||||  || |||||||||||||| || || 
Sbjct: 91643 gctgcaatttttgcagctgtgtctgactctttgcctgatttctttttcttcattgaagcc 91584

                                 
Query: 332   accttctttatacgctcctt 351
             | ||||||||  ||||||||
Sbjct: 91583 atcttctttaagcgctcctt 91564
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>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406H10
          Length = 156419

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Minus

                                                                         
Query: 212   tggttcttgtctttcttcttcgctgccgcaagctttgccctcctagccgccgcctcagat 271
             |||||||| ||||||||||| |||||||| ||| | || ||||| || || |||||||  
Sbjct: 71931 tggttcttctctttcttcttggctgccgcgagcctagcgctccttgctgcagcctcagca 71872

                                                                         
Query: 272   gctgcaatctttgctgctgcgtccatctctttgctcgacttctttttcttcatggatgct 331
             |||||||| ||||| |||| |||   ||||||||  || |||||||||||||| || || 
Sbjct: 71871 gctgcaatttttgcagctgtgtctgactctttgcctgatttctttttcttcattgaagcc 71812

                                 
Query: 332   accttctttatacgctcctt 351
             | ||||||||  ||||||||
Sbjct: 71811 atcttctttaagcgctcctt 71792
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>dbj|AK066179.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057C04, full
            insert sequence
          Length = 1557

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Minus

                                                                        
Query: 212  tggttcttgtctttcttcttcgctgccgcaagctttgccctcctagccgccgcctcagat 271
            |||||||| ||||||||||| |||||||| ||| | || ||||| || || |||||||  
Sbjct: 1302 tggttcttctctttcttcttggctgccgcgagcctagcgctccttgctgcagcctcagca 1243

                                                                        
Query: 272  gctgcaatctttgctgctgcgtccatctctttgctcgacttctttttcttcatggatgct 331
            |||||||| ||||| |||| |||   ||||||||  || |||||||||||||| || || 
Sbjct: 1242 gctgcaatttttgcagctgtgtctgactctttgcctgatttctttttcttcattgaagcc 1183

                                
Query: 332  accttctttatacgctcctt 351
            | ||||||||  ||||||||
Sbjct: 1182 atcttctttaagcgctcctt 1163
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>dbj|AK062062.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-D01, full
           insert sequence
          Length = 401

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 114/140 (81%)
 Strand = Plus / Minus

                                                                       
Query: 212 tggttcttgtctttcttcttcgctgccgcaagctttgccctcctagccgccgcctcagat 271
           |||||||| ||||||||||| |||||||| ||| | || ||||| || || |||||||  
Sbjct: 146 tggttcttctctttcttcttggctgccgcgagcctagcgctccttgctgcagcctcagca 87

                                                                       
Query: 272 gctgcaatctttgctgctgcgtccatctctttgctcgacttctttttcttcatggatgct 331
           |||||||| ||||| |||| |||   ||||||||  || |||||||||||||| || || 
Sbjct: 86  gctgcaatttttgcagctgtgtctgactctttgcctgatttctttttcttcattgaagcc 27

                               
Query: 332 accttctttatacgctcctt 351
           | ||||||||  ||||||||
Sbjct: 26  atcttctttaagcgctcctt 7
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>gb|AY107614.1| Zea mays PCO120183 mRNA sequence
          Length = 563

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 138/172 (80%)
 Strand = Plus / Minus

                                                                       
Query: 189 accgcaggggctgctgattatagtggttcttgtctttcttcttcgctgccgcaagctttg 248
           |||||| ||||||||| || || ||  |||| ||||||||||| || ||||||||| |||
Sbjct: 248 accgcacgggctgctggttgtaatgactcttttctttcttcttggccgccgcaagccttg 189

                                                                       
Query: 249 ccctcctagccgccgcctcagatgctgcaatctttgctgctgcgtccatctctttgctcg 308
           | ||||| || || ||||| |  || ||||| || || |||| |||| ||||| ||||||
Sbjct: 188 cactccttgctgcagcctcggcagcggcaattttggcagctgtgtccgtctctctgctcg 129

                                                               
Query: 309 acttctttttcttcatggatgctaccttctttatacgctccttgatatccac 360
           | ||||| |||||||| ||||| | |||||| |  |||||||| | ||||||
Sbjct: 128 atttcttcttcttcattgatgccatcttcttcaagcgctccttcacatccac 77
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>ref|NM_128126.3| Arabidopsis thaliana unknown protein AT2G25670 transcript variant
            AT2G25670.1 mRNA, complete cds
          Length = 1675

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 284  gctgctgcgtccatctctttgctcgacttctttttcttcatggatgctaccttctttat 342
            ||||| || |||| ||||||||  |||||||| |||||||||||||| | |||||||||
Sbjct: 1180 gctgcagcatccacctctttgcctgacttcttcttcttcatggatgcaagcttctttat 1122
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>ref|NM_179735.1| Arabidopsis thaliana unknown protein AT2G25670 transcript variant
            AT2G25670.2 mRNA, complete cds
          Length = 1793

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 284  gctgctgcgtccatctctttgctcgacttctttttcttcatggatgctaccttctttat 342
            ||||| || |||| ||||||||  |||||||| |||||||||||||| | |||||||||
Sbjct: 1298 gctgcagcatccacctctttgcctgacttcttcttcttcatggatgcaagcttctttat 1240
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>gb|AY150413.1| Arabidopsis thaliana unknown protein (At2g25670) mRNA, complete cds
          Length = 988

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                      
Query: 284 gctgctgcgtccatctctttgctcgacttctttttcttcatggatgctaccttctttat 342
           ||||| || |||| ||||||||  |||||||| |||||||||||||| | |||||||||
Sbjct: 860 gctgcagcatccacctctttgcctgacttcttcttcttcatggatgcaagcttctttat 802
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>gb|AY065267.1| Arabidopsis thaliana unknown protein (At2g25670) mRNA, complete cds
          Length = 1585

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 284  gctgctgcgtccatctctttgctcgacttctttttcttcatggatgctaccttctttat 342
            ||||| || |||| ||||||||  |||||||| |||||||||||||| | |||||||||
Sbjct: 1298 gctgcagcatccacctctttgcctgacttcttcttcttcatggatgcaagcttctttat 1240
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>gb|AC006053.3| Arabidopsis thaliana chromosome 2 clone F3N11 map B68, complete
             sequence
          Length = 100745

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 284   gctgctgcgtccatctctttgctcgacttctttttcttcatggatgctaccttctttat 342
             ||||| || |||| ||||||||  |||||||| |||||||||||||| | |||||||||
Sbjct: 46123 gctgcagcatccacctctttgcctgacttcttcttcttcatggatgcaagcttctttat 46181
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>emb|BX820160.1|CNS0AA1A Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS83ZB06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1523

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 293  tccatctctttgctcgacttctttttcttcatggatgctaccttctttat 342
            |||| ||||||||  |||||||| |||||||||||||| | |||||||||
Sbjct: 1168 tccacctctttgcctgacttcttcttcttcatggatgcaagcttctttat 1119
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>emb|BX819962.1|CNS0A9E3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS54ZD11 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1416

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 293  tccatctctttgctcgacttctttttcttcatggatgctaccttctttat 342
            |||| ||||||||  |||||||| |||||||||||||| | |||||||||
Sbjct: 1152 tccacctctttgcctgacttcttcttcttcatggatgcaagcttctttat 1103
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>gb|AY084947.1| Arabidopsis thaliana clone 12261 mRNA, complete sequence
          Length = 1657

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                              
Query: 293  tccatctctttgctcgacttctttttcttcatggatgctaccttctttat 342
            |||| ||||||||  |||||||| |||||||||||||| | |||||||||
Sbjct: 1169 tccacctctttgcctgacttcttcttcttcatggatgcaagcttctttat 1120
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>emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14 on chromosome 3,
             complete sequence
          Length = 96467

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 212   tggttcttgtctttcttcttcgctgccgcaagctttgc 249
             |||||||| |||||||||||||| || |||||| ||||
Sbjct: 51750 tggttcttctctttcttcttcgcggcagcaagccttgc 51713
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>gb|BT014205.1| Lycopersicon esculentum clone 133382F, mRNA sequence
          Length = 1330

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 427 ttcttctgcctcctttgaaga 447
           |||||||||||||||||||||
Sbjct: 447 ttcttctgcctcctttgaaga 427
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>emb|AL596139.1|CNS07EGR BAC A of library A from Tetraodon nigroviridis, T-cell receptor alpha
             delta locus (germline)
          Length = 74861

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 208   atagtggttcttgtctttcttcttc 232
             ||||| |||||||||||||||||||
Sbjct: 39011 atagttgttcttgtctttcttcttc 39035
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>gb|U80270.1|MDU80270 Malus domestica pAFD103 mRNA, partial cds
          Length = 1015

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 197 ggctgctgattatagtggttcttgtctttcttcttcgctgc 237
           |||||||| || || |||||||| ||||||||||| |||||
Sbjct: 584 ggctgctggttgtaatggttcttctctttcttcttagctgc 544
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>ref|NM_119413.2| Arabidopsis thaliana unknown protein AT4G32610 mRNA, complete cds
          Length = 2289

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                    
Query: 200  tgctgattatagtggttcttgtctttcttcttcgctgccgcaagctttgccctcct 255
            |||||||| ||||  ||||| ||||| ||||||||||| || | ||||||| ||||
Sbjct: 1394 tgctgattgtagtttttcttttcttttttcttcgctgcggccaactttgccttcct 1339
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>emb|CR376839.12| Zebrafish DNA sequence from clone DKEY-75G22 in linkage group 2,
             complete sequence
          Length = 127371

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 358   cactgaagcaacattttcat 377
             ||||||||||||||||||||
Sbjct: 24022 cactgaagcaacattttcat 24003
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>ref|XM_750048.1| Aspergillus fumigatus Af293 involucrin repeat protein (Afu2g08060)
             partial mRNA
          Length = 16617

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   ttcttgtctttcttcttcgc 234
             ||||||||||||||||||||
Sbjct: 11180 ttcttgtctttcttcttcgc 11161
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>gb|AC112149.4| Mus musculus BAC clone RP23-186F18 from chromosome 10, complete
             sequence
          Length = 195384

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 142   tggaggcacacagtatctaa 161
             ||||||||||||||||||||
Sbjct: 37610 tggaggcacacagtatctaa 37591
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>ref|XM_949846.1| Theileria annulata strain Ankara hypothetical protein (TA03545)
            partial mRNA
          Length = 2121

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 449  ttggctttcttagctttctt 468
            ||||||||||||||||||||
Sbjct: 1613 ttggctttcttagctttctt 1594
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>gb|AC011899.5| Homo sapiens BAC clone RP11-452C13 from 7, complete sequence
          Length = 214229

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   ataatctgagcagcaattca 189
             ||||||||||||||||||||
Sbjct: 72895 ataatctgagcagcaattca 72914
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>gb|AC103975.9| Homo sapiens chromosome 15, clone RP11-1001M11, complete sequence
          Length = 213676

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     tccatccatagagaattcca 110
              ||||||||||||||||||||
Sbjct: 169909 tccatccatagagaattcca 169890
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>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77
          Length = 197252

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                      
Query: 200    tgctgattatagtggttcttgtctttcttcttcgctgccgcaagctttgccctcct 255
              |||||||| ||||  ||||| ||||| ||||||||||| || | ||||||| ||||
Sbjct: 142400 tgctgattgtagtttttcttttcttttttcttcgctgcggccaactttgccttcct 142455
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>emb|AL022537.1|ATF4D11 Arabidopsis thaliana DNA chromosome 4, BAC clone F4D11 (ESSAII project)
          Length = 101715

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                     
Query: 200   tgctgattatagtggttcttgtctttcttcttcgctgccgcaagctttgccctcct 255
             |||||||| ||||  ||||| ||||| ||||||||||| || | ||||||| ||||
Sbjct: 88671 tgctgattgtagtttttcttttcttttttcttcgctgcggccaactttgccttcct 88616
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>gb|AC171006.3| Gallus gallus BAC clone CH261-172K16 from chromosome ul, complete
             sequence
          Length = 206511

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 424   tgtttcttctgcctcctttg 443
             ||||||||||||||||||||
Sbjct: 75521 tgtttcttctgcctcctttg 75502
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>gb|AC010609.7| Homo sapiens chromosome 5 clone CTB-4E7, complete sequence
          Length = 142576

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 304    gctcgacttctttttcttcatgga 327
              |||| |||||||||||||||||||
Sbjct: 115274 gctcaacttctttttcttcatgga 115251
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>gb|AC009185.6|AC009185 Homo sapiens chromosome 5 clone CTC-248O19, complete sequence
          Length = 87973

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 304  gctcgacttctttttcttcatgga 327
            |||| |||||||||||||||||||
Sbjct: 8041 gctcaacttctttttcttcatgga 8018
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>emb|BX828404.1|CNS0A3RA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH85ZH03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 920

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 200 tgctgattatagtggttcttgtctttcttcttcgctgccgcaagctttgccctcct 255
           |||||||| ||||  ||||| ||||| ||||||||||| || | ||||||| ||||
Sbjct: 754 tgctgattgtagtttttcttttcttttttcttcgctgcggccaactttgccttcct 699
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>emb|BX827788.1|CNS0A3VQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH21ZF04 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 487

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 200 tgctgattatagtggttcttgtctttcttcttcgctgccgcaagctttgccctcct 255
           |||||||| ||||  ||||| ||||| ||||||||||| || | ||||||| ||||
Sbjct: 241 tgctgattgtagtttttcttttcttttttcttcgctgcggccaactttgccttcct 186
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>gb|AC171112.2| Gallus gallus BAC clone CH261-138H22 from chromosome ul, complete
              sequence
          Length = 198767

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    tgtttcttctgcctcctttg 443
              ||||||||||||||||||||
Sbjct: 143968 tgtttcttctgcctcctttg 143949
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>gb|AC158807.11| Mus musculus 10 BAC RP24-64G24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 228073

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   tggaggcacacagtatctaa 161
             ||||||||||||||||||||
Sbjct: 50053 tggaggcacacagtatctaa 50072
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>gb|AC008389.4|AC008389 Homo sapiens chromosome 5 clone CTC-232D5, complete sequence
          Length = 80074

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 304   gctcgacttctttttcttcatgga 327
             |||| |||||||||||||||||||
Sbjct: 46702 gctcaacttctttttcttcatgga 46679
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>gb|BT024049.1| Zea mays clone EL01N0436D10 mRNA sequence
          Length = 1355

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 216  tcttgtctttcttcttcgctgccgcaagctttgccctcct 255
            |||| ||||||||||| || ||||||||| |||| |||||
Sbjct: 1191 tcttctctttcttcttggccgccgcaagccttgcgctcct 1152



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 292  gtccatctctttgctcgacttctttttcttcatggatgctaccttctttatacgctcctt 351
            |||| |||||||||||||  |||| |||||||| || || | |||||| | |||||||||
Sbjct: 1115 gtccgtctctttgctcgatctcttcttcttcattgaagccatcttcttcaaacgctcctt 1056
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>gb|AY111914.1| Zea mays CL46471_1 mRNA sequence
          Length = 1098

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 292 gtccatctctttgctcgacttctttttcttcatggatgctaccttctttatacgctcctt 351
           |||| |||||||||||||  |||| |||||||| || || | |||||| | |||||||||
Sbjct: 316 gtccgtctctttgctcgatctcttcttcttcattgaagccatcttcttcaaacgctcctt 375
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>emb|AL935138.7| Mouse DNA sequence from clone RP23-222H15 on chromosome 2, complete
             sequence
          Length = 139189

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   ttgcataatctgagcagcaa 185
             ||||||||||||||||||||
Sbjct: 57981 ttgcataatctgagcagcaa 58000


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,247,553
Number of Sequences: 3902068
Number of extensions: 5247553
Number of successful extensions: 104337
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104157
Number of HSP's gapped (non-prelim): 179
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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