ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart17f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC042617.1| Homo sapiens hypothetical protein MGC34646, mRNA ... 44 0.20
2gb|AY094971.1| Homo sapiens cellular retinaldehyde-binding prote... 44 0.20
3gb|AC124098.6| Mus musculus chromosome 3, clone RP23-452I19, com... 44 0.20
4gb|AC158795.4| Mus musculus chromosome 3, clone RP23-261G9, comp... 44 0.20
5gb|BC048992.1| Homo sapiens hypothetical protein MGC34646, mRNA ... 44 0.20
6emb|CR860488.1| Pongo pygmaeus mRNA; cDNA DKFZp469C2116 (from cl... 44 0.20
7emb|CR858372.1| Pongo pygmaeus mRNA; cDNA DKFZp459K2132 (from cl... 44 0.20
8dbj|AK125153.1| Homo sapiens cDNA FLJ43163 fis, clone FCBBF3000168 44 0.20
9dbj|AK094567.1| Homo sapiens cDNA FLJ37248 fis, clone BRAMY2006459 44 0.20
10dbj|AK096383.1| Homo sapiens cDNA FLJ39064 fis, clone NT2RP7014583 44 0.20
11gb|AF339775.1| Homo sapiens clone IMAGE:1338238, mRNA sequence 44 0.20
12gb|AC090094.5| Homo sapiens chromosome 8, clone RP11-252C19, com... 44 0.20
13ref|NM_173519.1| Homo sapiens hypothetical protein MGC34646 (MGC... 44 0.20
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.80
15gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genom... 42 0.80
16emb|AL389924.17| Human DNA sequence from clone RP11-544N10 on ch... 42 0.80
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.80
18gb|AC148936.3| Pan troglodytes BAC clone CH251-503L14 from Y, co... 40 3.1
19gb|AC146230.2| Pan troglodytes BAC clone CH251-228B19 from Y, co... 40 3.1
20gb|AC147123.2| Pan troglodytes BAC clone CH251-501L4 from Y, com... 40 3.1
21gb|AC145997.2| Pan troglodytes BAC clone RP43-41M5 from Y, compl... 40 3.1
22gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Can... 40 3.1
23emb|AL603765.6| Human DNA sequence from clone RP11-351G1 on chro... 40 3.1
24emb|AL139192.8| Human DNA sequence from clone RP11-515I23 on chr... 40 3.1
25emb|AL135781.8| Human DNA sequence from clone RP13-159P11 on chr... 40 3.1
26emb|BX601648.7| Zebrafish DNA sequence from clone DKEY-14F19 in ... 40 3.1
27gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 3.1
28gb|AC067946.6| Homo sapiens BAC clone RP11-627C20 from 4, comple... 40 3.1
29gb|AC095050.3| Homo sapiens BAC clone RP11-287F9 from 4, complet... 40 3.1
30gb|AC154264.2| Mus musculus BAC clone RP24-316B2 from chromosome... 40 3.1
31gb|AC006386.4|AC006386 Homo sapiens clone RP11-566H16, complete ... 40 3.1
32gb|AC016698.3|AC016698 Homo sapiens clone RP11-160O2, complete s... 40 3.1
33gb|AC010094.5|AC010094 Homo sapiens BAC clone RP11-336O5 from Y,... 40 3.1
34gb|AC010080.2|AC010080 Homo sapiens BAC clone RP11-5C5 from Y, c... 40 3.1
35ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 40 3.1
36gb|AC008160.11|AC008160 Mus musculus, clone 187_J_17, complete s... 40 3.1
37gb|AC002509.1|AC002509 Homo sapiens chromosome Y, clone 2Y, comp... 40 3.1
38emb|CT485606.7| Mouse DNA sequence from clone RP24-246F10 on chr... 40 3.1
39gb|AC002488.1|AC002488 Homo sapiens chromosome X, clone 36X, com... 40 3.1
40gb|AC153819.5| Mus musculus 6 BAC RP23-445H14 (Roswell Park Canc... 40 3.1
41emb|AL671493.12| Mouse DNA sequence from clone RP23-105O4 on chr... 40 3.1
42emb|AL714007.10| Mouse DNA sequence from clone RP23-295M3 on chr... 40 3.1
43emb|AL645856.5| Mouse DNA sequence from clone RP23-151N19 on chr... 40 3.1 
>gb|BC042617.1| Homo sapiens hypothetical protein MGC34646, mRNA (cDNA clone
            MGC:34646 IMAGE:5192332), complete cds
          Length = 3549

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 187  ttgcatacacataaattcaaac 208
            ||||||||||||||||||||||
Sbjct: 3332 ttgcatacacataaattcaaac 3311
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>gb|AY094971.1| Homo sapiens cellular retinaldehyde-binding protein-like protein
            mRNA, complete cds
          Length = 3430

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 187  ttgcatacacataaattcaaac 208
            ||||||||||||||||||||||
Sbjct: 3315 ttgcatacacataaattcaaac 3294
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>gb|AC124098.6| Mus musculus chromosome 3, clone RP23-452I19, complete sequence
          Length = 191853

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 14    ttacttgaaatattttttccat 35
             ||||||||||||||||||||||
Sbjct: 13299 ttacttgaaatattttttccat 13320
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>gb|AC158795.4| Mus musculus chromosome 3, clone RP23-261G9, complete sequence
          Length = 155916

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 14    ttacttgaaatattttttccat 35
             ||||||||||||||||||||||
Sbjct: 26604 ttacttgaaatattttttccat 26583
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>gb|BC048992.1| Homo sapiens hypothetical protein MGC34646, mRNA (cDNA clone
            IMAGE:5284856), containing frame-shift errors
          Length = 2893

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 187  ttgcatacacataaattcaaac 208
            ||||||||||||||||||||||
Sbjct: 2748 ttgcatacacataaattcaaac 2727
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>emb|CR860488.1| Pongo pygmaeus mRNA; cDNA DKFZp469C2116 (from clone DKFZp469C2116)
          Length = 4560

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 187  ttgcatacacataaattcaaac 208
            ||||||||||||||||||||||
Sbjct: 4262 ttgcatacacataaattcaaac 4283
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>emb|CR858372.1| Pongo pygmaeus mRNA; cDNA DKFZp459K2132 (from clone DKFZp459K2132)
          Length = 3588

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 187  ttgcatacacataaattcaaac 208
            ||||||||||||||||||||||
Sbjct: 3463 ttgcatacacataaattcaaac 3442
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>dbj|AK125153.1| Homo sapiens cDNA FLJ43163 fis, clone FCBBF3000168
          Length = 2717

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 187  ttgcatacacataaattcaaac 208
            ||||||||||||||||||||||
Sbjct: 2609 ttgcatacacataaattcaaac 2588
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>dbj|AK094567.1| Homo sapiens cDNA FLJ37248 fis, clone BRAMY2006459
          Length = 3406

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 187  ttgcatacacataaattcaaac 208
            ||||||||||||||||||||||
Sbjct: 3276 ttgcatacacataaattcaaac 3255
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>dbj|AK096383.1| Homo sapiens cDNA FLJ39064 fis, clone NT2RP7014583
          Length = 1999

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 187  ttgcatacacataaattcaaac 208
            ||||||||||||||||||||||
Sbjct: 1042 ttgcatacacataaattcaaac 1063
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>gb|AF339775.1| Homo sapiens clone IMAGE:1338238, mRNA sequence
          Length = 2069

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 187  ttgcatacacataaattcaaac 208
            ||||||||||||||||||||||
Sbjct: 1062 ttgcatacacataaattcaaac 1083
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>gb|AC090094.5| Homo sapiens chromosome 8, clone RP11-252C19, complete sequence
          Length = 158404

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 187    ttgcatacacataaattcaaac 208
              ||||||||||||||||||||||
Sbjct: 112981 ttgcatacacataaattcaaac 113002
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>ref|NM_173519.1| Homo sapiens hypothetical protein MGC34646 (MGC34646), mRNA
          Length = 3549

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 187  ttgcatacacataaattcaaac 208
            ||||||||||||||||||||||
Sbjct: 3332 ttgcatacacataaattcaaac 3311
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 186      tttgcatacacataaattcaa 206
                |||||||||||||||||||||
Sbjct: 15455877 tttgcatacacataaattcaa 15455857
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>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete
             sequence
          Length = 164705

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   tttgcatacacataaattcaa 206
             |||||||||||||||||||||
Sbjct: 45649 tttgcatacacataaattcaa 45669
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>emb|AL389924.17| Human DNA sequence from clone RP11-544N10 on chromosome 9 Contains a
             arachidonate 15-lipoxygenase (ALOX15) pseudogene and the
             5' end of the FGD3 gene for FGD1 family, member 3
             (FLJ00004), complete sequence
          Length = 72402

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 12    gattacttgaaatattttttc 32
             |||||||||||||||||||||
Sbjct: 19118 gattacttgaaatattttttc 19138
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 186      tttgcatacacataaattcaa 206
                |||||||||||||||||||||
Sbjct: 15450411 tttgcatacacataaattcaa 15450391
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>gb|AC148936.3| Pan troglodytes BAC clone CH251-503L14 from Y, complete sequence
          Length = 205879

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   ttgatgacgtttgaaccatt 233
             ||||||||||||||||||||
Sbjct: 73619 ttgatgacgtttgaaccatt 73600
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>gb|AC146230.2| Pan troglodytes BAC clone CH251-228B19 from Y, complete sequence
          Length = 179896

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   ttgatgacgtttgaaccatt 233
             ||||||||||||||||||||
Sbjct: 85940 ttgatgacgtttgaaccatt 85921
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>gb|AC147123.2| Pan troglodytes BAC clone CH251-501L4 from Y, complete sequence
          Length = 212773

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ttgatgacgtttgaaccatt 233
              ||||||||||||||||||||
Sbjct: 179521 ttgatgacgtttgaaccatt 179540
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>gb|AC145997.2| Pan troglodytes BAC clone RP43-41M5 from Y, complete sequence
          Length = 194981

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ttgatgacgtttgaaccatt 233
              ||||||||||||||||||||
Sbjct: 121367 ttgatgacgtttgaaccatt 121386
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>gb|AC007528.5| Homo sapiens 12 BAC RP11-473N11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188451

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     gattacttgaaatattttttccat 35
              |||||||||| |||||||||||||
Sbjct: 110820 gattacttgatatattttttccat 110843
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>emb|AL603765.6| Human DNA sequence from clone RP11-351G1 on chromosome 1, complete
              sequence
          Length = 157497

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 145    agaaaccacagaaccacact 164
              ||||||||||||||||||||
Sbjct: 135862 agaaaccacagaaccacact 135843
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>emb|AL139192.8| Human DNA sequence from clone RP11-515I23 on chromosome Xq13.2-21.2
             Contains the 5' end of a novel gene, complete sequence
          Length = 94056

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    attacttgaaatattttttc 32
             ||||||||||||||||||||
Sbjct: 21641 attacttgaaatattttttc 21660
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>emb|AL135781.8| Human DNA sequence from clone RP13-159P11 on chromosome X, complete
            sequence
          Length = 31387

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 191  atacacataaattcaaacattggt 214
            ||||||||||||||| ||||||||
Sbjct: 5356 atacacataaattcacacattggt 5333
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>emb|BX601648.7| Zebrafish DNA sequence from clone DKEY-14F19 in linkage group 11,
              complete sequence
          Length = 230487

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 102    aatgagaaaaaatactgtagcatt 125
              ||||| ||||||||||||||||||
Sbjct: 224486 aatgaaaaaaaatactgtagcatt 224463
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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 214      ttgatgacgtttgaaccatt 233
                ||||||||||||||||||||
Sbjct: 10947752 ttgatgacgtttgaaccatt 10947771



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 214     ttgatgacgtttgaaccatt 233
               ||||||||||||||||||||
Sbjct: 2979628 ttgatgacgtttgaaccatt 2979647
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>gb|AC067946.6| Homo sapiens BAC clone RP11-627C20 from 4, complete sequence
          Length = 136875

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aaatattttttccatggctt 40
             ||||||||||||||||||||
Sbjct: 10921 aaatattttttccatggctt 10940
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>gb|AC095050.3| Homo sapiens BAC clone RP11-287F9 from 4, complete sequence
          Length = 220878

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 21   aaatattttttccatggctt 40
            ||||||||||||||||||||
Sbjct: 8933 aaatattttttccatggctt 8952
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>gb|AC154264.2| Mus musculus BAC clone RP24-316B2 from chromosome 9, complete sequence
          Length = 166515

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    tacttgaaatattttttcca 34
             ||||||||||||||||||||
Sbjct: 41523 tacttgaaatattttttcca 41542
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>gb|AC006386.4|AC006386 Homo sapiens clone RP11-566H16, complete sequence
          Length = 164229

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   ttgatgacgtttgaaccatt 233
             ||||||||||||||||||||
Sbjct: 38776 ttgatgacgtttgaaccatt 38757
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>gb|AC016698.3|AC016698 Homo sapiens clone RP11-160O2, complete sequence
          Length = 154286

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   ttgatgacgtttgaaccatt 233
             ||||||||||||||||||||
Sbjct: 68966 ttgatgacgtttgaaccatt 68985
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>gb|AC010094.5|AC010094 Homo sapiens BAC clone RP11-336O5 from Y, complete sequence
          Length = 118436

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 191   atacacataaattcaaacattggt 214
             ||||||||||||||| ||||||||
Sbjct: 94840 atacacataaattcacacattggt 94817
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>gb|AC010080.2|AC010080 Homo sapiens BAC clone RP11-5C5 from Y, complete sequence
          Length = 156956

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ttgatgacgtttgaaccatt 233
              ||||||||||||||||||||
Sbjct: 153854 ttgatgacgtttgaaccatt 153873
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 214     ttgatgacgtttgaaccatt 233
               ||||||||||||||||||||
Sbjct: 3397098 ttgatgacgtttgaaccatt 3397079



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 214     ttgatgacgtttgaaccatt 233
               ||||||||||||||||||||
Sbjct: 2651238 ttgatgacgtttgaaccatt 2651257



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 214     ttgatgacgtttgaaccatt 233
               ||||||||||||||||||||
Sbjct: 1017490 ttgatgacgtttgaaccatt 1017509
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>gb|AC008160.11|AC008160 Mus musculus, clone 187_J_17, complete sequence
          Length = 206383

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 33     catggcttgaggccacactcagct 56
              |||||||||||||||| |||||||
Sbjct: 171152 catggcttgaggccactctcagct 171175
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>gb|AC002509.1|AC002509 Homo sapiens chromosome Y, clone 2Y, complete sequence
          Length = 142099

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 191    atacacataaattcaaacattggt 214
              ||||||||||||||| ||||||||
Sbjct: 136423 atacacataaattcacacattggt 136400
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>emb|CT485606.7| Mouse DNA sequence from clone RP24-246F10 on chromosome 9, complete
            sequence
          Length = 165446

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 15   tacttgaaatattttttcca 34
            ||||||||||||||||||||
Sbjct: 2026 tacttgaaatattttttcca 2007
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>gb|AC002488.1|AC002488 Homo sapiens chromosome X, clone 36X, complete sequence
          Length = 104710

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 191   atacacataaattcaaacattggt 214
             ||||||||||||||| ||||||||
Sbjct: 19441 atacacataaattcacacattggt 19464
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>gb|AC153819.5| Mus musculus 6 BAC RP23-445H14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 199780

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 33    catggcttgaggccacactcagct 56
             |||||||||||||||| |||||||
Sbjct: 15219 catggcttgaggccactctcagct 15242
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>emb|AL671493.12| Mouse DNA sequence from clone RP23-105O4 on chromosome X, complete
             sequence
          Length = 220631

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    cttgaaatattttttccatg 36
             ||||||||||||||||||||
Sbjct: 74961 cttgaaatattttttccatg 74942
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>emb|AL714007.10| Mouse DNA sequence from clone RP23-295M3 on chromosome X, complete
              sequence
          Length = 146552

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 96     tcacccaatgagaaaaaata 115
              ||||||||||||||||||||
Sbjct: 119117 tcacccaatgagaaaaaata 119136
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>emb|AL645856.5| Mouse DNA sequence from clone RP23-151N19 on chromosome 11, complete
             sequence
          Length = 116300

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ttttccatggcttgaggcca 47
             ||||||||||||||||||||
Sbjct: 37251 ttttccatggcttgaggcca 37232


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,049,589
Number of Sequences: 3902068
Number of extensions: 3049589
Number of successful extensions: 66461
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66313
Number of HSP's gapped (non-prelim): 148
length of query: 244
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 222
effective length of database: 17,147,199,772
effective search space: 3806678349384
effective search space used: 3806678349384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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