Clone Name | rbart17f09 |
---|---|
Clone Library Name | barley_pub |
>ACCO3_LYCES (P10967) 1-aminocyclopropane-1-carboxylate oxidase homolog (Protein| E8) Length = 363 Score = 48.9 bits (115), Expect = 6e-06 Identities = 23/63 (36%), Positives = 34/63 (53%) Frame = -3 Query: 425 ARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSEFFGAFFKRDLASKALLEN 246 +R+SI FF S YGP+ EL+S +NPPKYR+ T+ + R L + L Sbjct: 301 SRMSITCFFGESPYQSSKLYGPITELLSEDNPPKYRATTVKDHTSYLHNRGLDGTSALSR 360 Query: 245 FKL 237 +K+ Sbjct: 361 YKI 363
>DV4H_CATRO (O04847) Desacetoxyvindoline 4-hydroxylase (EC 1.14.11.20)| Length = 401 Score = 42.4 bits (98), Expect = 6e-04 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Frame = -3 Query: 446 VMNSREEARVSIAVFFN---PGKRGDSV-FYGPLPELVSPENPPKYRSFTMSEFFGAFFK 279 V+ ++ R+S+AV F + G S YGP+ EL+S ENPP Y+ T+ +F F Sbjct: 326 VLANKVGPRISVAVAFGIKTQTQEGVSPRLYGPIKELISEENPPIYKEVTVKDFITIRFA 385 Query: 278 RDLASKALLENFKL*N 231 + + L F+L N Sbjct: 386 KRFDDSSSLSPFRLNN 401
>FLS1_ARATH (Q96330) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS 1) Length = 336 Score = 38.5 bits (88), Expect = 0.008 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = -3 Query: 434 REEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSEF 297 +E+ R+S VF P + GPLPEL +NPPK++ F ++ Sbjct: 283 KEKTRMSWPVFLEPPREK---IVGPLPELTGDDNPPKFKPFAFKDY 325
>FLS_CITUN (Q9ZWQ9) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) (CitFLS) Length = 335 Score = 37.7 bits (86), Expect = 0.014 Identities = 19/47 (40%), Positives = 30/47 (63%) Frame = -3 Query: 437 SREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSEF 297 ++++ R+S VF P D+V GPLP+LV ENPPKY++ ++ Sbjct: 282 NKDKTRMSWPVFLEPP--ADTVV-GPLPQLVDDENPPKYKAKKFKDY 325
>LDOX_ARATH (Q96323) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)| (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) (ANS) Length = 356 Score = 37.4 bits (85), Expect = 0.018 Identities = 19/46 (41%), Positives = 29/46 (63%) Frame = -3 Query: 437 SREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSE 300 ++E+ R+S AVF P K D + PLPE+VS E+P K+ T ++ Sbjct: 293 NKEKVRISWAVFCEPPK--DKIVLKPLPEMVSVESPAKFPPRTFAQ 336
>LDOX_MAIZE (P41213) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)| (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) Length = 395 Score = 34.3 bits (77), Expect = 0.15 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = -3 Query: 437 SREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSEFFG-AFFKRDLASK 261 +RE R+S VF P DSV PLPELV+ +P ++ T + FK+ K Sbjct: 315 NREAVRISWVVFCEPPP--DSVLLHPLPELVTEGHPARFTPRTFKQHLDRKLFKKKQQHK 372 Query: 260 ALLENFKL*NGSN 222 A E NG + Sbjct: 373 AKAEEEDGGNGDH 385
>ACCO1_ARATH (Q06588) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 323 Score = 33.9 bits (76), Expect = 0.20 Identities = 19/39 (48%), Positives = 25/39 (64%) Frame = -3 Query: 452 RVVMNSREEARVSIAVFFNPGKRGDSVFYGPLPELVSPE 336 RV+ + E R+SIA F+NPG DSV + P PEL+ E Sbjct: 235 RVLSQTDGEGRMSIASFYNPG--SDSVIF-PAPELIGKE 270
>LDOX_PERFR (O04274) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)| (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) Length = 362 Score = 33.9 bits (76), Expect = 0.20 Identities = 17/46 (36%), Positives = 27/46 (58%) Frame = -3 Query: 437 SREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSE 300 ++E+ R+S AVF P K + + PLPE VS PP++ T ++ Sbjct: 299 NKEKVRISWAVFCEPPK--EKIVLQPLPETVSEVEPPRFPPRTFAQ 342
>LDOX_MALDO (P51091) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)| (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) (Anthocyanidin synthase) Length = 357 Score = 33.5 bits (75), Expect = 0.26 Identities = 18/48 (37%), Positives = 27/48 (56%) Frame = -3 Query: 443 MNSREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSE 300 M ++E+ R+S AVF P K + + PLPE VS + P + T +E Sbjct: 295 MVNKEKVRISWAVFCEPPK--EKIILKPLPETVSEDEPAMFPPRTFAE 340
>FLS_PETHY (Q07512) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) Length = 348 Score = 32.7 bits (73), Expect = 0.44 Identities = 14/41 (34%), Positives = 26/41 (63%) Frame = -3 Query: 437 SREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRS 315 ++++ R+S VF P + GP+P+L+S NPPK+++ Sbjct: 295 NKDKTRMSWPVFLEPPSEHE---VGPIPKLLSEANPPKFKT 332
>ACCO1_PETHY (Q08506) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 32.7 bits (73), Expect = 0.44 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Frame = -3 Query: 446 VMNSREEARVSIAVFFNPGKRGDSVFYGPLPELV---SPENPPKYRSFTMSEF 297 V+ ++ AR+S+A F+NPG D+V Y P P LV + EN Y F ++ Sbjct: 236 VIAQKDGARMSLASFYNPG--SDAVIY-PAPALVEKEAEENKQVYPKFVFDDY 285
>LDOX_PETHY (P51092) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)| (Leucocyanidin oxygenase) (Leucoanthocyanidin hydroxylase) Length = 430 Score = 32.3 bits (72), Expect = 0.57 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%) Frame = -3 Query: 437 SREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSEFFG-AFFKRD 273 ++E+ R S A+F P K + + PLPE V+ PP++ T ++ F++D Sbjct: 297 NKEKVRFSWAIFCEPPK--EKIILKPLPETVTEAEPPRFPPRTFAQHMAHKLFRKD 350
>FLS_MATIN (O04395) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) (Fragment) Length = 291 Score = 32.3 bits (72), Expect = 0.57 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = -3 Query: 434 REEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSEF 297 +E+ R+S V +P + GPLPEL S ++PPK++ ++ Sbjct: 237 KEKTRMSWPVLVSPTY---DMVVGPLPELTSEDDPPKFKPIAYKDY 279
>G3OX1_ARATH (Q39103) Gibberellin 3-beta-dioxygenase 1 (EC 1.14.11.15)| (Gibberellin 3 beta-hydroxylase 1) (GA 3-oxidase 1) (AtGA3ox1) Length = 358 Score = 32.3 bits (72), Expect = 0.57 Identities = 16/47 (34%), Positives = 26/47 (55%) Frame = -3 Query: 437 SREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSEF 297 ++ AR+S+A + P + P+P+LVSP P Y+S T E+ Sbjct: 294 NQTRARLSVAFLWGPQS---DIKISPVPKLVSPVESPLYQSVTWKEY 337
>ACCO_DENCR (Q9ZQZ1) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 318 Score = 32.0 bits (71), Expect = 0.74 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%) Frame = -3 Query: 422 RVSIAVFFNPGKRGDSVFYGPLPELVSPENPPK----YRSFTMSEFFGAFFKRDLASK 261 R+SIA F+NPG D+V + P PELV E K Y F ++ + ++ +K Sbjct: 242 RMSIASFYNPG--SDAVIF-PAPELVEKEAAEKKKETYPKFVFEDYMKLYVRQKFEAK 296
>HY6H_HYONI (P24397) Hyoscyamine 6-dioxygenase (EC 1.14.11.11) (Hyoscyamine| 6-beta-hydroxylase) Length = 344 Score = 32.0 bits (71), Expect = 0.74 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = -3 Query: 452 RVVMNSREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSEF 297 RVV + + RVSIA P S P EL++ +NPP Y+ ++ SEF Sbjct: 275 RVVTDPTRD-RVSIATLIGPDY---SCTIEPAKELLNQDNPPLYKPYSYSEF 322
>FLS_EUSGR (Q9M547) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) Length = 334 Score = 32.0 bits (71), Expect = 0.74 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = -3 Query: 437 SREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRS 315 ++E+ R+S VF P + GP+P+LV+ ENP K+++ Sbjct: 281 NKEKTRMSWPVFLEPPPDHE---VGPIPKLVNEENPAKFKT 318
>FLS_SOLTU (Q41452) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) Length = 349 Score = 31.2 bits (69), Expect = 1.3 Identities = 13/41 (31%), Positives = 24/41 (58%) Frame = -3 Query: 437 SREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRS 315 ++ + R+S VF P + GP+P L++ NPPK+++ Sbjct: 296 NKYKTRMSWPVFLEPSSEHE---VGPIPNLINEANPPKFKT 333
>ACCO2_MALDO (O48882) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4)| (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) Length = 330 Score = 31.2 bits (69), Expect = 1.3 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%) Frame = -3 Query: 452 RVVMNSREEARVSIAVFFNPGKRGDSVFYGPLPELV--SPENPPKYRSFTMSEF 297 RV+ S + R+SIA F+NP GD F P P L+ E P Y F ++ Sbjct: 235 RVIAQS-DGTRMSIASFYNP---GDDAFISPAPALLEEKSEVSPTYPKFLFDDY 284
>ACCO_DIACA (P31528) Probable 1-aminocyclopropane-1-carboxylate oxidase (EC| 1.14.17.4) (ACC oxidase) (Ethylene-forming enzyme) (EFE) (Senescence-related protein) Length = 321 Score = 31.2 bits (69), Expect = 1.3 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = -3 Query: 422 RVSIAVFFNPGKRGDSVFYGPLPELVSPENPP--KYRSFTMSEFFGAFFKRDLASK 261 R+SIA F+NPG D+V Y P P LV E Y F ++ + K K Sbjct: 250 RMSIASFYNPG--SDAVIY-PAPTLVEKEEEKCRAYPKFVFEDYMNLYLKLKFQEK 302
>ACCO_DIOKA (Q8S932) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 318 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = -3 Query: 446 VMNSREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPK--YRSFTMSEF 297 V+ + R+SIA F+NPG D+V Y P P LV E K Y F ++ Sbjct: 236 VVAQTDGTRMSIASFYNPG--NDAVIY-PAPALVEKEVEEKEVYPKFVFDDY 284
>ACCO1_CUCME (Q04644) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (PMEL1) Length = 318 Score = 30.0 bits (66), Expect = 2.8 Identities = 21/64 (32%), Positives = 30/64 (46%) Frame = -3 Query: 452 RVVMNSREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSEFFGAFFKRD 273 RV+ + R+SIA F+NPG D+V Y P P LV + + + F + K Sbjct: 235 RVLTQTSGTGRMSIASFYNPG--SDAVIY-PAPALVEKDQDEEKKEVYPKFVFEDYMKLY 291 Query: 272 LASK 261 L K Sbjct: 292 LGVK 295
>ACCO1_DORSP (P31238) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) Length = 327 Score = 30.0 bits (66), Expect = 2.8 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 7/61 (11%) Frame = -3 Query: 422 RVSIAVFFNPGKRGDSVFYGPLPELVSPENPPK-------YRSFTMSEFFGAFFKRDLAS 264 R+SIA F+NPG D+V + P P LV E K Y F ++ + ++ + Sbjct: 248 RMSIASFYNPG--SDAVIF-PAPALVEKEAEEKEEKKKEIYPKFVFQDYMNLYIRKKFEA 304 Query: 263 K 261 K Sbjct: 305 K 305
>ACCO_PRUMU (Q9MB94) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 30.0 bits (66), Expect = 2.8 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Frame = -3 Query: 446 VMNSREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPK---YRSFTMSEF 297 V+ + R+SIA F+NPG D+V Y P P LV E K Y F ++ Sbjct: 236 VIAQTDGTRMSIASFYNPG--SDAVIY-PAPTLVEKEAEEKNQVYPKFVFEDY 285
>ACCO2_DORSP (Q39705) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4)| (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) Length = 325 Score = 29.3 bits (64), Expect = 4.8 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%) Frame = -3 Query: 422 RVSIAVFFNPGKRGDSVFYGPLPELVSPENPPK-----YRSFTMSEFFGAFFKRDLASK 261 R+SIA F+NPG D+V + P P LV E + Y F ++ + ++ +K Sbjct: 248 RMSIASFYNPG--SDAVIF-PAPALVEKEAEEEEKKEIYPKFVFQDYMNLYIRKKFEAK 303
>FLS_MALDO (Q9XHG2) Flavonol synthase/flavanone 3-hydroxylase (EC 1.14.11.23)| (EC 1.14.11.9) (FLS) Length = 337 Score = 29.3 bits (64), Expect = 4.8 Identities = 16/41 (39%), Positives = 25/41 (60%) Frame = -3 Query: 437 SREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRS 315 ++++ R+S VF P D V GP P+LV+ N PKY++ Sbjct: 284 NKDKTRISWPVFLEPP--ADHVV-GPHPQLVNAVNQPKYKT 321
>ACCO1_MALDO (Q00985) 1-aminocyclopropane-1-carboxylate oxidase 1 (EC 1.14.17.4)| (ACC oxidase 1) (Ethylene-forming enzyme) (EFE) (Protein AP4) (PAE12) Length = 314 Score = 29.3 bits (64), Expect = 4.8 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -3 Query: 452 RVVMNSREEARVSIAVFFNPGKRGDSVFYGPLPELV--SPENPPKYRSFTMSEF 297 RV+ S + R+SIA F+NP G+ F P P ++ E+ P Y F ++ Sbjct: 235 RVIAQS-DGTRMSIASFYNP---GNDSFISPAPAVLEKKTEDAPTYPKFVFDDY 284
>ACCO4_LYCES (P24157) 1-aminocyclopropane-1-carboxylate oxidase 4 (EC 1.14.17.4)| (ACC oxidase 4) (Ethylene-forming enzyme) (EFE) (Protein pHTOM5) Length = 316 Score = 28.9 bits (63), Expect = 6.3 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = -3 Query: 446 VMNSREEARVSIAVFFNPGKRGDSVFYGPLPELVSPENPPKYRSFTMSEF 297 V+ + R+S+A F+NPG D+V Y P P L+ E+ Y F ++ Sbjct: 236 VIAQTDGTRMSLASFYNPG--NDAVIY-PAPSLIE-ESKQVYPKFVFDDY 281
>ACCO2_LYCES (P07920) 1-aminocyclopropane-1-carboxylate oxidase 2 (EC 1.14.17.4)| (ACC oxidase 2) (Ethylene-forming enzyme) (EFE) (Protein GTOMA) Length = 316 Score = 28.9 bits (63), Expect = 6.3 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Frame = -3 Query: 446 VMNSREEARVSIAVFFNPGKRGDSVFYGPLPELVSPE----NPPKYRSFTMSEF 297 V+ ++ R+S+A F+NPG D++ Y P P LV E N Y F ++ Sbjct: 236 VIAQKDGTRMSLASFYNPG--NDALIY-PAPALVDKEAEEHNKQVYPKFMFDDY 286
>YRDR_BACSU (O07086) Hypothetical transport protein yrdR| Length = 321 Score = 28.9 bits (63), Expect = 6.3 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = -1 Query: 187 KYVTISV*VWFCGFSEVPPNIMLQYFFSLGDR--HILAVSVGL 65 KY IS+ + F G S V + +FFSLGD IL + +G+ Sbjct: 128 KYTMISILIAFLGASMVITKGNISFFFSLGDHLFSILFIFIGV 170
>SPY1_MOUSE (Q9QXV9) Sprouty homolog 1 (Spry-1)| Length = 313 Score = 28.9 bits (63), Expect = 6.3 Identities = 12/33 (36%), Positives = 18/33 (54%) Frame = -2 Query: 225 KRHQTMFEFMCMQSM*PSQCKCGSVVSPKCLPT 127 K T +F+C Q +CKCG +P+ LP+ Sbjct: 165 KEDPTQHKFICEQC---GKCKCGECTAPRALPS 194
>ACCO_ACTCH (P31237) 1-aminocyclopropane-1-carboxylate oxidase (EC 1.14.17.4)| (ACC oxidase) (Ethylene-forming enzyme) (EFE) Length = 319 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%) Frame = -3 Query: 422 RVSIAVFFNPGKRGDSVFYGPLPELVSPENPPK---YRSFTMSEF 297 R+SIA F+NPG D+V Y P P LV E + Y F ++ Sbjct: 244 RMSIASFYNPG--SDAVMY-PAPALVDKEEDQQKQVYPKFVFEDY 285 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,621,334 Number of Sequences: 219361 Number of extensions: 1300662 Number of successful extensions: 3049 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2968 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3049 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)