Clone Name | rbart17f06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | TFDB_RALEJ (P27138) 2,4-dichlorophenol 6-monooxygenase (EC 1.14.... | 30 | 4.6 | 2 | PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B me... | 29 | 6.0 | 3 | C560_CYACA (P48935) Succinate dehydrogenase cytochrome b560 subu... | 29 | 7.8 |
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>TFDB_RALEJ (P27138) 2,4-dichlorophenol 6-monooxygenase (EC 1.14.13.20)| (2,4-dichlorophenol hydroxylase) (2,4-DCP hydroxylase) Length = 598 Score = 29.6 bits (65), Expect = 4.6 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = -3 Query: 436 IDTEGLVAKDKFHVSYRGAKLNSSLSQVLVNCLRYYLRR 320 IDT ++ + FHV+YR L + + LV+ +R L R Sbjct: 545 IDTGAILVRPDFHVAYRATSLPADAAGDLVSAMRRILGR 583
>PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B member 1 (Protein| LL5-alpha) Length = 1377 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Frame = +1 Query: 244 KRLHRQEHEM---RRHRTIINSCLHLSRASGGNSANN*PA 354 +RL QE E +R TI+N C SRA GG A P+ Sbjct: 599 ERLREQEMERLERQRLETILNLCAEYSRADGGPEAGELPS 638
>C560_CYACA (P48935) Succinate dehydrogenase cytochrome b560 subunit (Succinate| dehydrogenase, subunit III) Length = 132 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = -3 Query: 427 EGLVAKDKFHVSYRGAKLNSSLSQVLVNCLRYYL 326 E ++ +D F L+ SL VL+NCLRY+L Sbjct: 98 EVILMEDNFVTMSTKLSLSLSLVLVLINCLRYFL 131 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,274,497 Number of Sequences: 219361 Number of extensions: 1386308 Number of successful extensions: 2822 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2777 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2822 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)