ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart17f06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK099473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013024D11, full insert sequence Length = 1242 Score = 228 bits (115), Expect = 1e-56 Identities = 169/187 (90%) Strand = Plus / Minus Query: 292 atcaatagctgtcttcatctgtctcgggcctccggaggtaatagcgcaaacaattaacca 351 |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || | Sbjct: 933 atcagtagctgtcttcatctgtctcgggcctccggagataataacgcaagcaattcacga 874 Query: 352 gcacctgagataacgagctgttcagttttgcgcctctgtaactcacatgaaacttgtcct 411 ||||||||||||| |||||||||| |||||| ||||||||||||||||| || ||||||| Sbjct: 873 gcacctgagataatgagctgttcaattttgcacctctgtaactcacatggaatttgtcct 814 Query: 412 tggcaaccaagccctcggtatcaatctcagctgattccacatcaatgtttacgtcagtaa 471 | ||||||||||| || ||||| |||||||||||||||||||||| ||| |||||||| | Sbjct: 813 ttgcaaccaagccttcagtatctatctcagctgattccacatcaacgttcacgtcagtga 754 Query: 472 tgatctt 478 ||||||| Sbjct: 753 tgatctt 747
>dbj|AK060070.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A05, full insert sequence Length = 1212 Score = 228 bits (115), Expect = 1e-56 Identities = 169/187 (90%) Strand = Plus / Minus Query: 292 atcaatagctgtcttcatctgtctcgggcctccggaggtaatagcgcaaacaattaacca 351 |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || | Sbjct: 896 atcagtagctgtcttcatctgtctcgggcctccggagataataacgcaagcaattcacga 837 Query: 352 gcacctgagataacgagctgttcagttttgcgcctctgtaactcacatgaaacttgtcct 411 ||||||||||||| |||||||||| |||||| ||||||||||||||||| || ||||||| Sbjct: 836 gcacctgagataatgagctgttcaattttgcacctctgtaactcacatggaatttgtcct 777 Query: 412 tggcaaccaagccctcggtatcaatctcagctgattccacatcaatgtttacgtcagtaa 471 | ||||||||||| || ||||| |||||||||||||||||||||| ||| |||||||| | Sbjct: 776 ttgcaaccaagccttcagtatctatctcagctgattccacatcaacgttcacgtcagtga 717 Query: 472 tgatctt 478 ||||||| Sbjct: 716 tgatctt 710
>gb|BT016276.1| Zea mays clone Contig109 mRNA sequence Length = 1310 Score = 190 bits (96), Expect = 3e-45 Identities = 168/192 (87%) Strand = Plus / Minus Query: 292 atcaatagctgtcttcatctgtctcgggcctccggaggtaatagcgcaaacaattaacca 351 ||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||| || Sbjct: 987 atcaatagctgtcttcatctgtctcaggccttcggaggtaataacgcaggcaattggtca 928 Query: 352 gcacctgagataacgagctgttcagttttgcgcctctgtaactcacatgaaacttgtcct 411 || |||||||||| |||||||| |||||| | ||||||||||| |||||||||||||||| Sbjct: 927 gcgcctgagataaggagctgtttagttttccacctctgtaacttacatgaaacttgtcct 868 Query: 412 tggcaaccaagccctcggtatcaatctcagctgattccacatcaatgtttacgtcagtaa 471 | |||||||| || || ||||||||||||||||||||||||||||| ||| ||| | | Sbjct: 867 tcgcaaccaaaccttcagtatcaatctcagctgattccacatcaatatttgtgtccgcga 808 Query: 472 tgatcttgatta 483 |||||||||||| Sbjct: 807 tgatcttgatta 796
>gb|AY103964.1| Zea mays PCO075775 mRNA sequence Length = 1498 Score = 190 bits (96), Expect = 3e-45 Identities = 168/192 (87%) Strand = Plus / Minus Query: 292 atcaatagctgtcttcatctgtctcgggcctccggaggtaatagcgcaaacaattaacca 351 ||||||||||||||||||||||||| ||||| ||||||||||| |||| ||||| || Sbjct: 1032 atcaatagctgtcttcatctgtctcaggccttcggaggtaataacgcaggcaattggtca 973 Query: 352 gcacctgagataacgagctgttcagttttgcgcctctgtaactcacatgaaacttgtcct 411 || |||||||||| |||||||| |||||| | ||||||||||| |||||||||||||||| Sbjct: 972 gcgcctgagataaggagctgtttagttttccacctctgtaacttacatgaaacttgtcct 913 Query: 412 tggcaaccaagccctcggtatcaatctcagctgattccacatcaatgtttacgtcagtaa 471 | |||||||| || || ||||||||||||||||||||||||||||| ||| ||| | | Sbjct: 912 tcgcaaccaaaccttcagtatcaatctcagctgattccacatcaatatttgtgtccgcga 853 Query: 472 tgatcttgatta 483 |||||||||||| Sbjct: 852 tgatcttgatta 841
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 354 acctgagataacgagctgttcagttttgcgcctctgtaactcacatgaaacttgtccttg 413 ||||||||||| |||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 2595077 acctgagataatgagctgttcaattttgcacctctgtaactcacatggaatttgtccttt 2595136 Query: 414 gcaaccaagccct 426 ||||||||||||| Sbjct: 2595137 gcaaccaagccct 2595149 Score = 83.8 bits (42), Expect = 5e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 292 atcaatagctgtcttcatctgtctcgggcctccggaggtaatagcgcaaacaattaacca 351 |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || | Sbjct: 2594922 atcagtagctgtcttcatctgtctcgggcctccggagataataacgcaagcaattcacga 2594981 Query: 352 gcacct 357 |||||| Sbjct: 2594982 gcacct 2594987 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 429 gtatcaatctcagctgattccacatcaatgtttacgtcagtaatgatctt 478 ||||| |||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 2595237 gtatctatctcagctgattccacatcaacgttcacgtcagtgatgatctt 2595286
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 354 acctgagataacgagctgttcagttttgcgcctctgtaactcacatgaaacttgtccttg 413 ||||||||||| |||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 2595021 acctgagataatgagctgttcaattttgcacctctgtaactcacatggaatttgtccttt 2595080 Query: 414 gcaaccaagccct 426 ||||||||||||| Sbjct: 2595081 gcaaccaagccct 2595093 Score = 83.8 bits (42), Expect = 5e-13 Identities = 60/66 (90%) Strand = Plus / Plus Query: 292 atcaatagctgtcttcatctgtctcgggcctccggaggtaatagcgcaaacaattaacca 351 |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || | Sbjct: 2594866 atcagtagctgtcttcatctgtctcgggcctccggagataataacgcaagcaattcacga 2594925 Query: 352 gcacct 357 |||||| Sbjct: 2594926 gcacct 2594931 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 429 gtatcaatctcagctgattccacatcaatgtttacgtcagtaatgatctt 478 ||||| |||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 2595181 gtatctatctcagctgattccacatcaacgttcacgtcagtgatgatctt 2595230
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 97.6 bits (49), Expect = 3e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 354 acctgagataacgagctgttcagttttgcgcctctgtaactcacatgaaacttgtccttg 413 ||||||||||| |||||||||| |||||| ||||||||||||||||| || |||||||| Sbjct: 72932 acctgagataatgagctgttcaattttgcacctctgtaactcacatggaatttgtccttt 72873 Query: 414 gcaaccaagccct 426 ||||||||||||| Sbjct: 72872 gcaaccaagccct 72860 Score = 83.8 bits (42), Expect = 5e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 292 atcaatagctgtcttcatctgtctcgggcctccggaggtaatagcgcaaacaattaacca 351 |||| |||||||||||||||||||||||||||||||| ||||| ||||| ||||| || | Sbjct: 73087 atcagtagctgtcttcatctgtctcgggcctccggagataataacgcaagcaattcacga 73028 Query: 352 gcacct 357 |||||| Sbjct: 73027 gcacct 73022 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 429 gtatcaatctcagctgattccacatcaatgtttacgtcagtaatgatctt 478 ||||| |||||||||||||||||||||| ||| |||||||| |||||||| Sbjct: 72772 gtatctatctcagctgattccacatcaacgttcacgtcagtgatgatctt 72723
>gb|BT012883.1| Lycopersicon esculentum clone 113986R, mRNA sequence Length = 1501 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 450 acatcaatgtttacgtcagtaatgatcttga 480 ||||||||||||| |||||||||||||||| Sbjct: 1198 acatcaatgtttatttcagtaatgatcttga 1168
>ref|NM_120556.2| Arabidopsis thaliana amino acid binding AT5G04740 mRNA, complete cds Length = 1166 Score = 44.1 bits (22), Expect = 0.43 Identities = 52/62 (83%) Strand = Plus / Minus Query: 399 tgaaacttgtccttggcaaccaagccctcggtatcaatctcagctgattccacatcaatg 458 ||||||||||| || ||||||| ||||| ||||| ||||| || |||||||| || ||| Sbjct: 889 tgaaacttgtctttcgcaaccagtccctctgtatctatctctgcggattccacgtctatg 830 Query: 459 tt 460 || Sbjct: 829 tt 828
>gb|AY114702.1| Arabidopsis thaliana putative protein (At5g04740) mRNA, complete cds Length = 975 Score = 44.1 bits (22), Expect = 0.43 Identities = 52/62 (83%) Strand = Plus / Minus Query: 399 tgaaacttgtccttggcaaccaagccctcggtatcaatctcagctgattccacatcaatg 458 ||||||||||| || ||||||| ||||| ||||| ||||| || |||||||| || ||| Sbjct: 800 tgaaacttgtctttcgcaaccagtccctctgtatctatctctgcggattccacgtctatg 741 Query: 459 tt 460 || Sbjct: 740 tt 739
>gb|AY072401.1| Arabidopsis thaliana putative protein (At5g04740) mRNA, complete cds Length = 1155 Score = 44.1 bits (22), Expect = 0.43 Identities = 52/62 (83%) Strand = Plus / Minus Query: 399 tgaaacttgtccttggcaaccaagccctcggtatcaatctcagctgattccacatcaatg 458 ||||||||||| || ||||||| ||||| ||||| ||||| || |||||||| || ||| Sbjct: 889 tgaaacttgtctttcgcaaccagtccctctgtatctatctctgcggattccacgtctatg 830 Query: 459 tt 460 || Sbjct: 829 tt 828
>gb|AY087362.1| Arabidopsis thaliana clone 34592 mRNA, complete sequence Length = 1118 Score = 44.1 bits (22), Expect = 0.43 Identities = 52/62 (83%) Strand = Plus / Minus Query: 399 tgaaacttgtccttggcaaccaagccctcggtatcaatctcagctgattccacatcaatg 458 ||||||||||| || ||||||| ||||| ||||| ||||| || |||||||| || ||| Sbjct: 877 tgaaacttgtctttcgcaaccagtccctctgtatctatctctgcggattccacgtctatg 818 Query: 459 tt 460 || Sbjct: 817 tt 816
>gb|AC164974.2| Pan troglodytes BAC clone CH251-565G22 from chromosome 4, complete sequence Length = 210224 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 ggatggggctgctaaagctcc 130 ||||||||||||||||||||| Sbjct: 73183 ggatggggctgctaaagctcc 73203
>gb|AC141882.3| Mus musculus BAC clone RP24-177O3 from chromosome 17, complete sequence Length = 173120 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 agctcccaggggcctgatgtc 145 ||||||||||||||||||||| Sbjct: 54657 agctcccaggggcctgatgtc 54637
>gb|AC118541.12| Mus musculus strain 129/SvJ chromosome 17 clone mgs1-205i23, complete sequence Length = 179569 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 agctcccaggggcctgatgtc 145 ||||||||||||||||||||| Sbjct: 27946 agctcccaggggcctgatgtc 27966
>emb|X80207.1|SSVLDLRCR G.gallus VLDL/vitellogenin receptor Length = 3224 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 tgcttacaacagatattgcag 240 ||||||||||||||||||||| Sbjct: 2584 tgcttacaacagatattgcag 2564
>ref|NM_205229.1| Gallus gallus very low density lipoprotein receptor (VLDLR), mRNA Length = 3224 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 tgcttacaacagatattgcag 240 ||||||||||||||||||||| Sbjct: 2584 tgcttacaacagatattgcag 2564
>gb|AC106746.2| Homo sapiens chromosome 5 clone RP11-149E17, complete sequence Length = 179868 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 aagctcccaggggcctgatgt 144 ||||||||||||||||||||| Sbjct: 31610 aagctcccaggggcctgatgt 31630
>gb|AC092270.2| Homo sapiens chromosome 5 clone CTC-213G1, complete sequence Length = 133708 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 aagctcccaggggcctgatgt 144 ||||||||||||||||||||| Sbjct: 17321 aagctcccaggggcctgatgt 17301
>gb|AC161820.5| Pan troglodytes BAC clone CH251-502M7 from chromosome unknown, complete sequence Length = 169869 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 ggatggggctgctaaagctcc 130 ||||||||||||||||||||| Sbjct: 167532 ggatggggctgctaaagctcc 167552
>gb|AC107068.3| Homo sapiens BAC clone RP11-121C2 from 4, complete sequence Length = 181804 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 ggatggggctgctaaagctcc 130 ||||||||||||||||||||| Sbjct: 109352 ggatggggctgctaaagctcc 109332
>gb|AC154742.2| Mus musculus BAC clone RP24-392F16 from 13, complete sequence Length = 129749 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 ctctgtaactcacatgaaact 405 ||||||||||||||||||||| Sbjct: 58729 ctctgtaactcacatgaaact 58709
>ref|NM_001031548.1| Gallus gallus acid phosphatase 2, lysosomal (ACP2), mRNA Length = 2913 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tgaatgctttccaatgtgat 91 |||||||||||||||||||| Sbjct: 1459 tgaatgctttccaatgtgat 1478
>gb|AC166079.2| Mus musculus BAC clone RP23-51L15 from chromosome 7, complete sequence Length = 193749 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 ctgtcttcatctgtctcggg 319 |||||||||||||||||||| Sbjct: 131503 ctgtcttcatctgtctcggg 131484
>emb|BX890590.11| Zebrafish DNA sequence from clone DKEY-15H19 in linkage group 3, complete sequence Length = 141661 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 ccagttttaatgcattttgg 195 |||||||||||||||||||| Sbjct: 105406 ccagttttaatgcattttgg 105425
>gb|AY363103.1|AY363102S2 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 6 through 10 and partial cds Length = 688489 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ggttttttacatgcacatta 34 |||||||||||||||||||| Sbjct: 341501 ggttttttacatgcacatta 341520
>gb|AC076968.38| Homo sapiens 12 BAC RP11-686F15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 203038 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gtaactcacatgaaacttgtcctt 412 |||||| ||||||||||||||||| Sbjct: 173708 gtaactgacatgaaacttgtcctt 173731
>emb|AL355495.10| Human DNA sequence from clone RP11-53N12 on chromosome 10, complete sequence Length = 166118 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 tttccaatgtgattcttctaggaa 102 |||||||| ||||||||||||||| Sbjct: 493 tttccaatctgattcttctaggaa 516
>gb|AC154570.2| Mus musculus BAC clone RP23-385M5 from chromosome 14, complete sequence Length = 209218 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ggttttttacatgcacatta 34 |||||||||||||||||||| Sbjct: 168149 ggttttttacatgcacatta 168130
>emb|AJ720873.1| Gallus gallus mRNA for hypothetical protein, clone 28i17 Length = 2913 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tgaatgctttccaatgtgat 91 |||||||||||||||||||| Sbjct: 1459 tgaatgctttccaatgtgat 1478
>emb|AL645746.10| Mouse DNA sequence from clone RP23-153B6 on chromosome 13, complete sequence Length = 75405 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ggaaaccaatgggatggggc 118 |||||||||||||||||||| Sbjct: 24011 ggaaaccaatgggatggggc 23992
>gb|AC072041.21| Homo sapiens 3 BAC RP11-450A18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111809 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 aatgatcttgattacttcca 489 |||||||||||||||||||| Sbjct: 64427 aatgatcttgattacttcca 64446
>gb|AC026223.11| Homo sapiens chromosome 10 clone RP11-548F5, complete sequence Length = 169131 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 tttccaatgtgattcttctaggaa 102 |||||||| ||||||||||||||| Sbjct: 71964 tttccaatctgattcttctaggaa 71941
>gb|AC095041.3| Homo sapiens BAC clone RP11-84H6 from 4, complete sequence Length = 176008 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ttcagttttgcgcctctgta 391 |||||||||||||||||||| Sbjct: 142491 ttcagttttgcgcctctgta 142472
>gb|AC012531.11|AC012531 Homo sapiens, clone RP11-83K1, complete sequence Length = 171949 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 389 gtaactcacatgaaacttgtcctt 412 |||||| ||||||||||||||||| Sbjct: 11434 gtaactgacatgaaacttgtcctt 11457
>dbj|BS000166.1| Pan troglodytes chromosome 22 clone:RP43-094M15, map 22, complete sequences Length = 158730 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 433 caatctcagctgattccaca 452 |||||||||||||||||||| Sbjct: 152486 caatctcagctgattccaca 152467
>emb|CR956626.9| Zebrafish DNA sequence from clone CH73-162I18 in linkage group 22, complete sequence Length = 123595 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aatgcattttgggaacacat 203 |||||||||||||||||||| Sbjct: 19312 aatgcattttgggaacacat 19293
>emb|BX942822.5| Zebrafish DNA sequence from clone CH211-263M11 in linkage group 22, complete sequence Length = 56717 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 aatgcattttgggaacacat 203 |||||||||||||||||||| Sbjct: 48486 aatgcattttgggaacacat 48467
>emb|BX569783.4| Zebrafish DNA sequence from clone CH211-245H14 in linkage group 20, complete sequence Length = 200617 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 209 agattttgttttgcttacaa 228 |||||||||||||||||||| Sbjct: 13207 agattttgttttgcttacaa 13226
>gb|AC134542.3| Mus musculus BAC clone RP24-441E15 from 6, complete sequence Length = 175750 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 tcacatgaaacttgtccttg 413 |||||||||||||||||||| Sbjct: 140359 tcacatgaaacttgtccttg 140378 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,443,961 Number of Sequences: 3902068 Number of extensions: 4443961 Number of successful extensions: 78499 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78397 Number of HSP's gapped (non-prelim): 102 length of query: 492 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 470 effective length of database: 17,147,199,772 effective search space: 8059183892840 effective search space used: 8059183892840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
