>emb|AL049825.18|HSJ662B22 Human DNA sequence from clone RP4-662B22 on chromosome 1p12-13.3
             Contains the 3' end of the NGFB gene for nerve growth
             factor (beta polypeptide) and the 5' end of a novel gene,
             complete sequence
          Length = 116521

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 483   ttttcacagataaacttgagc 503
             |||||||||||||||||||||
Sbjct: 85782 ttttcacagataaacttgagc 85802

>gb|AC115947.8| Mus musculus chromosome 5, clone RP24-560A18, complete sequence
          Length = 202882

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 393   cacgcctccttcaatccctg 412
             ||||||||||||||||||||
Sbjct: 79473 cacgcctccttcaatccctg 79454

>gb|AC115972.13| Mus musculus chromosome 5, clone RP24-79A6, complete sequence
          Length = 235928

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   cgagggagactggacttgga 381
             ||||||||||||||||||||
Sbjct: 29592 cgagggagactggacttgga 29573

>gb|AC087067.3| Rattus norvegicus strain Brown Norway clone RP31-40H10, complete
             sequence
          Length = 178746

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tgaggataaaacaactagct 21
             ||||||||||||||||||||
Sbjct: 43398 tgaggataaaacaactagct 43379

>gb|AC087041.2| Rattus norvegicus strain Brown Norway clone RP31-188L2, complete sequence
          Length = 123260

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      tgaggataaaacaactagct 21
              ||||||||||||||||||||
Sbjct: 122311 tgaggataaaacaactagct 122292

>emb|CT009641.2| Pan troglodytes chromosome X BAC PTB-007I17, complete sequence
          Length = 68055

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    atgcagtgttgatgctcattgctg 62
             |||||||||| |||||||||||||
Sbjct: 10293 atgcagtgttcatgctcattgctg 10270

>gb|AC129906.2| Homo sapiens chromosome 8, clone CTC-820M8, complete sequence
          Length = 119122

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    agtgatgcagtgttgatgct 54
             ||||||||||||||||||||
Sbjct: 57572 agtgatgcagtgttgatgct 57591

>gb|AC105142.4| Homo sapiens chromosome 8, clone CTD-3240I20, complete sequence
          Length = 112106

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   agtgatgcagtgttgatgct 54
            ||||||||||||||||||||
Sbjct: 8693 agtgatgcagtgttgatgct 8674

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 68      acaaaccatcatgtcaacag 87
               ||||||||||||||||||||
Sbjct: 4355919 acaaaccatcatgtcaacag 4355900

>emb|AL049610.9|HS1055C14 Human DNA sequence from clone RP5-1055C14 on chromosome Xq22.1-22.3
             Contains the TCEAL1 gene for transcription elongation
             factor A (SII)-like 1, a novel gene, a novel pseudogene
             (LOC139779), the MORF4L2 gene for mortality factor 4 like
             2, a novel gene, the 3' end of a gene for the possible
             ortholog of mouse glycine receptor alpha 4 subunit (GLRA4)
             and a novel gene (MGC39655), complete sequence
          Length = 100269

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 39    atgcagtgttgatgctcattgctg 62
             |||||||||| |||||||||||||
Sbjct: 95955 atgcagtgttcatgctcattgctg 95932

>emb|BX511076.8| Zebrafish DNA sequence from clone CH211-276P17 in linkage group 17,
             complete sequence
          Length = 61227

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   taattgctcagacaactgct 483
             ||||||||||||||||||||
Sbjct: 11059 taattgctcagacaactgct 11040

>emb|BX647659.1|HSM807805 Homo sapiens genomic DNA; cDNA DKFZp686M12101 (from clone
            DKFZp686M12101)
          Length = 2340

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   agtgatgcagtgttgatgct 54
            ||||||||||||||||||||
Sbjct: 2100 agtgatgcagtgttgatgct 2081

>emb|BX538011.1|HSM806155 Homo sapiens genomic DNA; cDNA DKFZp686O1946 (from clone
            DKFZp686O1946)
          Length = 5432

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 407  tccctggcactggtgctgct 426
            ||||||||||||||||||||
Sbjct: 3521 tccctggcactggtgctgct 3540

>gb|AC084758.3| Homo sapiens chromosome 15 clone RP11-348A14 map 15q21.1, complete
            sequence
          Length = 192074

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 266  atttgaagcaatcttgacaa 285
            ||||||||||||||||||||
Sbjct: 9696 atttgaagcaatcttgacaa 9715

>gb|AC006058.1| Homo sapiens 3p22-7 PAC RPCI4-555D20 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 147146

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 407   tccctggcactggtgctgct 426
             ||||||||||||||||||||
Sbjct: 73940 tccctggcactggtgctgct 73959

>gb|AC093840.4| Homo sapiens BAC clone RP11-433O3 from 4, complete sequence
          Length = 173814

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atgtcaacagagacaatttg 97
              ||||||||||||||||||||
Sbjct: 107074 atgtcaacagagacaatttg 107093

>gb|AC158783.5| Mus musculus chromosome 5, clone RP23-144P3, complete sequence
          Length = 193276

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   cacgcctccttcaatccctg 412
             ||||||||||||||||||||
Sbjct: 39794 cacgcctccttcaatccctg 39813

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 229      atgcatagttgcataccgta 248
                ||||||||||||||||||||
Sbjct: 28881681 atgcatagttgcataccgta 28881662

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 308      ataggtggtatatgcatgatccca 331
                ||||||||||||| ||||||||||
Sbjct: 17985022 ataggtggtatatccatgatccca 17985045

>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 2      tgaggataaaacaactagct 21
              ||||||||||||||||||||
Sbjct: 699097 tgaggataaaacaactagct 699078

>gb|AC156459.2| Mus musculus BAC clone RP23-269A9 from chromosome 13, complete sequence
          Length = 188142

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 132    gcacattacatgaagagaca 151
              ||||||||||||||||||||
Sbjct: 115064 gcacattacatgaagagaca 115045

>gb|AC023355.5|AC023355 Homo sapiens chromosome 15 clone RP11-154J22 map 15q21.1, complete
             sequence
          Length = 154738

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   atttgaagcaatcttgacaa 285
             ||||||||||||||||||||
Sbjct: 63359 atttgaagcaatcttgacaa 63378

>dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1509_C06
          Length = 113436

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 308   ataggtggtatatgcatgatccca 331
             ||||||||||||| ||||||||||
Sbjct: 36676 ataggtggtatatccatgatccca 36699

>emb|BX005398.6| Zebrafish DNA sequence from clone CH211-207O17, complete sequence
          Length = 209859

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 132  gcacattacatgaagagacaacatcaac 159
            |||||||||||||||| |||||| ||||
Sbjct: 2268 gcacattacatgaagaaacaacaacaac 2295

>emb|CR388178.5| Zebrafish DNA sequence from clone DKEY-114D20 in linkage group 22,
              complete sequence
          Length = 171742

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 132    gcacattacatgaagagacaacatcaac 159
              |||||||||||||||| |||||| ||||
Sbjct: 159228 gcacattacatgaagaaacaacaacaac 159255

>emb|BX276096.4| Zebrafish DNA sequence from clone CH211-240J18 in linkage group 5,
             complete sequence
          Length = 170664

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   agccattagttgccattact 350
             ||||||||||||||||||||
Sbjct: 25799 agccattagttgccattact 25780

>dbj|AP004710.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1429D6, complete
              sequence
          Length = 179115

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     agtgatgcagtgttgatgct 54
              ||||||||||||||||||||
Sbjct: 140269 agtgatgcagtgttgatgct 140288

>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04,
             complete sequence
          Length = 154865

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   atgcatagttgcataccgta 248
             ||||||||||||||||||||
Sbjct: 93843 atgcatagttgcataccgta 93824

>emb|CR628370.28| Zebrafish DNA sequence from clone DKEY-33L16 in linkage group 22,
             complete sequence
          Length = 190967

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 132   gcacattacatgaagagacaacatcaac 159
             |||||||||||||||| |||||| ||||
Sbjct: 82374 gcacattacatgaagaaacaacaacaac 82401


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,480,750
Number of Sequences: 3902068
Number of extensions: 4480750
Number of successful extensions: 83972
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83864
Number of HSP's gapped (non-prelim): 108
length of query: 533
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 510
effective length of database: 17,143,297,704
effective search space: 8743081829040
effective search space used: 8743081829040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)