ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart17e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds 430 e-117
2gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, com... 161 2e-36
3ref|XM_468463.1| Oryza sativa (japonica cultivar-group), mRNA 103 5e-19
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
5dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
6dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
7dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3... 103 5e-19
8dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds 103 5e-19
9gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence 66 1e-07
10gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-... 66 1e-07
11emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein 66 1e-07
12emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein 64 4e-07
13gb|AF067184.1|AF067184 Samanea saman aquaporin 1 (Aqp1) mRNA, co... 62 2e-06
14gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence 52 0.001
15gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker 52 0.001
16gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker 52 0.001
17gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein... 52 0.001
18gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein... 52 0.001
19dbj|AB206098.1| Mimosa pudica pip1;1 mRNA for plasma membrane in... 52 0.001
20gb|AY103580.1| Zea mays PCO072544 mRNA sequence 52 0.001
21gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 50 0.006
22emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome... 50 0.006
23emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 50 0.006
24emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complet... 48 0.023
25gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein... 48 0.023
26dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
27dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
28dbj|AB100870.1| Malus x domestica MdPIP1b mRNA for plasma membra... 48 0.023
29dbj|AB100869.1| Malus x domestica MdPIP1a mRNA for plasma membra... 48 0.023
30dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.023
31dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.023
32dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.023
33gb|AY107675.1| Zea mays PCO112712 mRNA sequence 48 0.023
34gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, ... 48 0.023
35dbj|AB058679.1| Pyrus communis Py-PIP1-1 mRNA for plasma membran... 48 0.023
36dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for ... 48 0.023
37emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major... 46 0.091
38gb|AF326490.1|AF326490 Zea mays plasma membrane integral protein... 46 0.091
39emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intri... 44 0.36
40gb|AC155942.6| Mus musculus 10 BAC RP24-492L7 (Roswell Park Canc... 44 0.36
41gb|AD000007.1|MSGY414A Mycobacterium tuberculosis sequence from ... 44 0.36
42gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 1.4
43ref|NM_187081.2| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
44ref|NM_053924.1| Rattus norvegicus ATP-binding cassette, sub-fam... 42 1.4
45gb|AC104706.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
46gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.4
47emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for p... 42 1.4
48emb|BX537273.16| Zebrafish DNA sequence from clone CH211-151F2 i... 42 1.4
49emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp... 42 1.4
50gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.4
51gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, comple... 42 1.4
52dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
53dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
54dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
55dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
56dbj|AK072632.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
57emb|CR361565.8| Zebrafish DNA sequence from clone CH211-242L1 in... 42 1.4
58gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.4
59emb|BX005014.5| Zebrafish DNA sequence from clone CH211-103E2 in... 42 1.4
60dbj|AB020209.1| Rattus norvegicus mRNA for multidrug resistance ... 42 1.4
61ref|XM_476112.1| Oryza sativa (japonica cultivar-group), predic... 40 5.6
62gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipie... 40 5.6
63gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 5.6
64gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 5.6
65gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
66gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Can... 40 5.6
67gb|AC166171.2| Mus musculus BAC clone RP23-136L14 from chromosom... 40 5.6
68gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124... 40 5.6
69gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome ... 40 5.6
70gb|AC160125.2| Mus musculus BAC clone RP23-317M11 from chromosom... 40 5.6
71gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.6
72emb|Y17691.1|XCT17691 Xanthomonas campestris Tn5044 transposon 40 5.6
73emb|BX511098.5| Zebrafish DNA sequence from clone CH211-202L3 in... 40 5.6
74gb|AC104511.5| Drosophila melanogaster X BAC RP98-39D14 (Roswell... 40 5.6
75gb|AE005860.1| Caulobacter crescentus CB15 section 186 of 359 of... 40 5.6
76emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, co... 40 5.6
77gb|AC013553.14| Homo sapiens chromosome 15, clone RP11-325L12, c... 40 5.6
78gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.6
79emb|BX004760.10| Zebrafish DNA sequence from clone CH211-222O4 i... 40 5.6
80gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, r... 40 5.6
81gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Canc... 40 5.6
82gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosom... 40 5.6
83gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.6
84dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.6
85dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.6
86emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, ... 40 5.6
87dbj|AK110599.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
88dbj|AK110596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
89emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 i... 40 5.6
90gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55... 40 5.6
91gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 ... 40 5.6
92emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on ch... 40 5.6
93gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.6
94emb|BX005187.9| Mouse DNA sequence from clone RP23-187O10 on chr... 40 5.6
95gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, compl... 40 5.6 
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds
          Length = 1285

 Score =  430 bits (217), Expect = e-117
 Identities = 243/249 (97%), Gaps = 2/249 (0%)
 Strand = Plus / Minus

                                                                        
Query: 6    aattcgatcggcggcccttctt-aataataatttacatacatatgcacgctggattaaat 64
            |||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1285 aattcgatcgtcgtcccttctttaataataatttacatacatatgcacgctggattaaat 1226

                                                                        
Query: 65   ggcgtgcgtggtactggtacaatgcaaaaggtaggggaagtagtacagcaggtactatac 124
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1225 ggcgtgcgtggtactggtacaatgcaaaaggtagggaaagtagtacagcaggtactatac 1166

                                                                        
Query: 125  tgactgaaactcgcagacttgaacaggcgacgctgccggcaggcacacacaccgaggaga 184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 tgactgaaactcgcagacttgaacaggcgacgctgccggcaggcacacacaccgaggaga 1106

                                                                        
Query: 185  gacggcagatttgagaactattacagcgtgcgcggccgggacacgatccacg-tacgcgc 243
            |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 1105 gacggcagatttgagaactattacagcgtgcgcggccgagacacgatccacgttacgcgc 1046

                     
Query: 244  gcaccagca 252
            |||||||||
Sbjct: 1045 gcaccagca 1037



 Score =  297 bits (150), Expect = 1e-77
 Identities = 150/150 (100%)
 Strand = Plus / Minus

                                                                        
Query: 270  atgatcggtcgacgatgaacagcgataagattccatccatggccgcccagactgattggt 329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 atgatcggtcgacgatgaacagcgataagattccatccatggccgcccagactgattggt 960

                                                                        
Query: 330  ccactagccgcggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgc 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959  ccactagccgcggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgc 900

                                          
Query: 390  cagcgccgcgccgatgaacggtcccaccca 419
            ||||||||||||||||||||||||||||||
Sbjct: 899  cagcgccgcgccgatgaacggtcccaccca 870
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>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds
          Length = 1248

 Score =  161 bits (81), Expect = 2e-36
 Identities = 137/154 (88%), Gaps = 5/154 (3%)
 Strand = Plus / Minus

                                                                        
Query: 270  atgatcggtcgacgatgaacagcgataagattcca----tccatggccgcccagactgat 325
            ||||||| |||||||||||||||||||||||||||    ||||||| || | ||||||||
Sbjct: 1007 atgatcgatcgacgatgaacagcgataagattccacccgtccatggtcggc-agactgat 949

                                                                        
Query: 326  tggtccactagccgcggctcttgaaggggatcgccctgatcaccaccacgtggtagatcg 385
            |||   ||||| ||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 948  tggctgactagtcgcggctcttgaaggggatggccctgatcaccaccacgtggtagatgg 889

                                              
Query: 386  ccgccagcgccgcgccgatgaacggtcccaccca 419
            ||||||||||||| ||||||||||| || |||||
Sbjct: 888  ccgccagcgccgcaccgatgaacggaccaaccca 855



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 63/72 (87%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                        
Query: 2    aattaattcgatcggcggcccttcttaat-aataatttacatacatatgcacgctggatt 60
            |||||| ||||||| ||  |||||||||| |||||||||||||||||||||||||   ||
Sbjct: 1248 aattaactcgatcgacgttccttcttaattaataatttacatacatatgcacgctccgtt 1189

                        
Query: 61   aaatggcgtgcg 72
            |||| |||||||
Sbjct: 1188 aaatcgcgtgcg 1177



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 153  gacgctgccggcaggcacacacaccgaggagag 185
            ||||||| |||||||||||||||||||||||||
Sbjct: 1111 gacgctgtcggcaggcacacacaccgaggagag 1079



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 132  aactcgcagacttgaacagg 151
            ||||||||||||||||||||
Sbjct: 1142 aactcgcagacttgaacagg 1123
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>ref|XM_468463.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1319

 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                        
Query: 340  cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 399
            ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 1012 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 953

                                
Query: 400  ccgatgaacggtcccaccca 419
            ||||||||||| || |||||
Sbjct: 952  ccgatgaacggaccaaccca 933
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                            
Query: 340      cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 399
                ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 35369407 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 35369348

                                    
Query: 400      ccgatgaacggtcccaccca 419
                ||||||||||| || |||||
Sbjct: 35369347 ccgatgaacggaccaaccca 35369328



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                            
Query: 342      gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
                ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 27065642 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 27065583
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>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C04
          Length = 103194

 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                         
Query: 340   cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 399
             ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 29955 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 29896

                                 
Query: 400   ccgatgaacggtcccaccca 419
             ||||||||||| || |||||
Sbjct: 29895 ccgatgaacggaccaaccca 29876
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>dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086K14, full
            insert sequence
          Length = 1318

 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                        
Query: 340  cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 399
            ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 1011 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 952

                                
Query: 400  ccgatgaacggtcccaccca 419
            ||||||||||| || |||||
Sbjct: 951  ccgatgaacggaccaaccca 932
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>dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3, promoter region and
            complete cds
          Length = 5325

 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                        
Query: 340  cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 399
            ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 4910 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 4851

                                
Query: 400  ccgatgaacggtcccaccca 419
            ||||||||||| || |||||
Sbjct: 4850 ccgatgaacggaccaaccca 4831
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>dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds
          Length = 1403

 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Minus

                                                                       
Query: 340 cggctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcg 399
           ||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| 
Sbjct: 989 cggctcttgaaggggattgctctgatcaccaccacgtggtagatggccgccagtgccgct 930

                               
Query: 400 ccgatgaacggtcccaccca 419
           ||||||||||| || |||||
Sbjct: 929 ccgatgaacggaccaaccca 910
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>gb|BT017668.1| Zea mays clone EL01N0441H09.c mRNA sequence
          Length = 698

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 343 ctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccg 402
           |||||||| |||||||||||||| | ||||  ||||||||| || |||||||| ||||||
Sbjct: 426 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 367

                
Query: 403 atgaa 407
           |||||
Sbjct: 366 atgaa 362
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>gb|AY243800.1| Zea mays plasma membrane intrinsic protein (PIP1-1) mRNA, complete
           cds
          Length = 1086

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 343 ctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccg 402
           |||||||| |||||||||||||| | ||||  ||||||||| || |||||||| ||||||
Sbjct: 857 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 798

                
Query: 403 atgaa 407
           |||||
Sbjct: 797 atgaa 793
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>emb|X82633.1|ZMTRAPRO Z.mays mRNA for transmembrane protein
          Length = 1169

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                       
Query: 343 ctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccg 402
           |||||||| |||||||||||||| | ||||  ||||||||| || |||||||| ||||||
Sbjct: 914 ctcttgaacgggatcgccctgatgatcacctggtggtagatggcagccagcgcagcgccg 855

                
Query: 403 atgaa 407
           |||||
Sbjct: 854 atgaa 850
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>emb|X76911.1|HVEMIP H.vulgare mRNA for transmembrane protein
          Length = 1225

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 56/64 (87%)
 Strand = Plus / Minus

                                                                       
Query: 344 tcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccga 403
           ||||||| |||||||| ||||| ||||||  ||||||||| || |||||||| |||||||
Sbjct: 926 tcttgaatgggatcgctctgatgaccacctggtggtagatggcggccagcgcggcgccga 867

               
Query: 404 tgaa 407
           ||||
Sbjct: 866 tgaa 863
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>gb|AF067184.1|AF067184 Samanea saman aquaporin 1 (Aqp1) mRNA, complete cds
          Length = 1298

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 64/75 (85%)
 Strand = Plus / Minus

                                                                       
Query: 345 cttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccgat 404
           ||||||||| || |||||||||||||| |||||||| |  || ||||| ||||| || ||
Sbjct: 916 cttgaagggaatggccctgatcaccacgacgtggtacagtgctgccagtgccgctccaat 857

                          
Query: 405 gaacggtcccaccca 419
           ||| |||||||||||
Sbjct: 856 gaatggtcccaccca 842
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>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence
          Length = 1154

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 820 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 761

                 
Query: 402 gatgaa 407
           ||||||
Sbjct: 760 gatgaa 755
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>gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker
          Length = 824

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 258 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 317

                 
Query: 402 gatgaa 407
           ||||||
Sbjct: 318 gatgaa 323
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>gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker
          Length = 763

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 519 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 460

                 
Query: 402 gatgaa 407
           ||||||
Sbjct: 459 gatgaa 454
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>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete
           cds
          Length = 1153

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 970 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 911

                 
Query: 402 gatgaa 407
           ||||||
Sbjct: 910 gatgaa 905
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>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete
           cds
          Length = 1296

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 965 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 906

                 
Query: 402 gatgaa 407
           ||||||
Sbjct: 905 gatgaa 900
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>dbj|AB206098.1| Mimosa pudica pip1;1 mRNA for plasma membrane intrinsic protein
           1;1, complete cds
          Length = 1096

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                       
Query: 358 gccctgatcaccaccacgtggtagatcgccgccagcgccgcgccgatgaacggtcccacc 417
           |||||||||||||| |||||||| |  || |||| ||| || |||||||| |||||||||
Sbjct: 921 gccctgatcaccacgacgtggtacagtgctgccaacgctgctccgatgaatggtcccacc 862

             
Query: 418 ca 419
           ||
Sbjct: 861 ca 860
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>gb|AY103580.1| Zea mays PCO072544 mRNA sequence
          Length = 1633

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                        
Query: 342  gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
            ||||||||| ||||| |||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 1294 gctcttgaacgggatggccctgatgatcacctggtggtagatggcagccagggcggcgcc 1235

                  
Query: 402  gatgaa 407
            ||||||
Sbjct: 1234 gatgaa 1229
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 362    tgatcaccaccacgtggtagatcgccgccagcgccgc 398
              |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 685604 tgatcaccgccacgaggtagatcgccgccagcaccgc 685640
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>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13
          Length = 342416

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 362    tgatcaccaccacgtggtagatcgccgccagcgccgc 398
              |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 342248 tgatcaccgccacgaggtagatcgccgccagcaccgc 342284
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>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             3/14
          Length = 320050

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 362   tgatcaccaccacgtggtagatcgccgccagcgccgc 398
             |||||||| ||||| ||||||||||||||||| ||||
Sbjct: 18398 tgatcaccgccacgaggtagatcgccgccagcaccgc 18434
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>emb|AJ224327.1|OSAJ4327 Oryza sativa mRNA for aquaporin, complete CDS
          Length = 1139

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 885 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 826
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>gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete
           cds
          Length = 1338

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 340 cggctcttgaaggggatcgccctgatcaccaccacgtggtagat 383
           ||||||||||||||||  |||||||| |  ||||||||||||||
Sbjct: 932 cggctcttgaaggggagggccctgatgatgaccacgtggtagat 889
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>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1486_E07
          Length = 110494

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                         
Query: 342   gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
             ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 37291 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 37232
to top
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0461B08
          Length = 153743

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                          
Query: 342    gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
              ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 118844 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 118785
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>dbj|AB100870.1| Malus x domestica MdPIP1b mRNA for plasma membrane intrinsic
           protein, complete cds
          Length = 1223

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 345 cttgaaggggatcgccctgatcaccaccacgtggta 380
           |||||| ||||| ||||||||||| |||||||||||
Sbjct: 944 cttgaaagggatggccctgatcacaaccacgtggta 909
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>dbj|AB100869.1| Malus x domestica MdPIP1a mRNA for plasma membrane intrinsic
           protein, complete cds
          Length = 1260

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 345 cttgaaggggatcgccctgatcaccaccacgtggta 380
           |||||| ||||| ||||||||||| |||||||||||
Sbjct: 948 cttgaaagggatggccctgatcacaaccacgtggta 913
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>dbj|AK104658.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D06, full
           insert sequence
          Length = 1128

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 918 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 859
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>dbj|AK103807.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147A07, full
           insert sequence
          Length = 1205

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 973 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 914
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>dbj|AK061769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-C05, full
           insert sequence
          Length = 1136

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 918 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 859
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>gb|AY107675.1| Zea mays PCO112712 mRNA sequence
          Length = 791

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 340 cggctcttgaaggggatcgccctgatcaccaccacgtggtagat 383
           ||||||||||||||||  |||||||| |  ||||||||||||||
Sbjct: 365 cggctcttgaaggggagggccctgatgatgaccacgtggtagat 322
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>gb|AF022737.1|AF022737 Oryza sativa transmembrane protein mRNA, complete cds
          Length = 1140

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 913 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 854
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>dbj|AB058679.1| Pyrus communis Py-PIP1-1 mRNA for plasma membrane intrinsic protein
            1-1, complete cds
          Length = 1351

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 345  cttgaaggggatcgccctgatcaccaccacgtggta 380
            |||||| ||||| ||||||||||| |||||||||||
Sbjct: 1085 cttgaaagggatggccctgatcacaaccacgtggta 1050
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>dbj|AB009665.1| Oryza sativa (japonica cultivar-group) mRNA for water channel
           protein, complete cds
          Length = 1116

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                       
Query: 342 gctcttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgcc 401
           ||||||||| |||||||||||||| | ||||  ||||||||| || ||||| || |||||
Sbjct: 916 gctcttgaatgggatcgccctgatgatcacctggtggtagatggcagccagggcagcgcc 857
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>emb|AJ001292.1|CPPIPA2 Craterostigma plantagineum mRNA for major intrinsic protein PIPa2
          Length = 1189

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                       
Query: 345 cttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccgat 404
           |||||| || || ||||| ||||| ||||||||||| |  || || ||||| ||||||||
Sbjct: 920 cttgaatggaatggcccttatcacaaccacgtggtaaagtgcggcgagcgctgcgccgat 861

                          
Query: 405 gaacggtcccaccca 419
           ||| ||||| |||||
Sbjct: 860 gaatggtccgaccca 846
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>gb|AF326490.1|AF326490 Zea mays plasma membrane integral protein ZmPIP1-6 mRNA, complete cds
          Length = 1325

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                        
Query: 345  cttgaaggggatcgccctgatcaccaccacgtggtagatcgccgccagcgccgcgccgat 404
            |||||||||||| |||||||  || |||  |||||| | |||||| |||||||| |||  
Sbjct: 1074 cttgaaggggatggccctgaggacgacctggtggtacaccgccgcaagcgccgctccggc 1015

                           
Query: 405  gaacggtcccaccca 419
            |||||| ||||||||
Sbjct: 1014 gaacgggcccaccca 1000
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>emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene)
          Length = 1364

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 338 cgcggctcttgaaggggatcgccctgatcaccaccacgtggtagat 383
           ||||||||||||| ||||  |||||||| |  ||||||||||||||
Sbjct: 943 cgcggctcttgaaagggagggccctgatgatgaccacgtggtagat 898
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>gb|AC155942.6| Mus musculus 10 BAC RP24-492L7 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 174309

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 27    taataataatttacatacatat 48
             ||||||||||||||||||||||
Sbjct: 29491 taataataatttacatacatat 29512
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>gb|AD000007.1|MSGY414A Mycobacterium tuberculosis sequence from clone y414a
          Length = 40121

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 383   tcgccgccagcgccgcgccgat 404
             ||||||||||||||||||||||
Sbjct: 32612 tcgccgccagcgccgcgccgat 32633
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>gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OABb-289A1, complete
             sequence
          Length = 109794

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    ataatttacatacatatgcac 52
             |||||||||||||||||||||
Sbjct: 95031 ataatttacatacatatgcac 95011
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>ref|NM_187081.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1215

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 375 gtggtagatcgccgccagcgccgcgccgatgaacggtcccaccca 419
           |||||| | |||||| | |||||||||||||||||| || |||||
Sbjct: 898 gtggtacagcgccgcgatcgccgcgccgatgaacggcccaaccca 854
to top
>ref|NM_053924.1| Rattus norvegicus ATP-binding cassette, sub-family C (CFTR/MRP),
            member 5 (Abcc5), mRNA
          Length = 5744

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 355  atcgccctgatcaccaccacg 375
            |||||||||||||||||||||
Sbjct: 3461 atcgccctgatcaccaccacg 3481
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>gb|AC104706.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_F05,
             complete sequence
          Length = 119573

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 27    taataataatttacatacatatgca 51
             ||||||||| |||||||||||||||
Sbjct: 27479 taataataacttacatacatatgca 27503
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 384     cgccgccagcgccgcgccgat 404
               |||||||||||||||||||||
Sbjct: 2953569 cgccgccagcgccgcgccgat 2953589
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>emb|AJ310639.1|HVU310639 Hordeum vulgare partial pip1 gene for putative aquaporin
          Length = 1291

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 375  gtggtagatcgccgccagcgccgcgccgatgaa 407
            ||||||||| || |||||||| |||||||||||
Sbjct: 1288 gtggtagatggcggccagcgcggcgccgatgaa 1256
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>emb|BX537273.16| Zebrafish DNA sequence from clone CH211-151F2 in linkage group 10,
             complete sequence
          Length = 167226

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    taataataatttacatacata 47
             |||||||||||||||||||||
Sbjct: 60087 taataataatttacatacata 60107
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>emb|AJ843992.1| Plantago major partial mRNA for aquaporin 2 (aqp2 gene)
          Length = 1089

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 344 tcttgaaggggatcgccctgatcaccaccacgtggta 380
           ||||||| ||||| || |||||||||||||| |||||
Sbjct: 841 tcttgaatgggatagctctgatcaccaccacatggta 805
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 384     cgccgccagcgccgcgccgat 404
               |||||||||||||||||||||
Sbjct: 4187442 cgccgccagcgccgcgccgat 4187462
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>gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, complete sequence
          Length = 125133

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    ataatttacatacatatgcac 52
             |||||||||||||||||||||
Sbjct: 18615 ataatttacatacatatgcac 18635
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                             
Query: 375      gtggtagatcgccgccagcgccgcgccgatgaacggtcccaccca 419
                |||||| | |||||| | |||||||||||||||||| || |||||
Sbjct: 15306495 gtggtacagcgccgcgatcgccgcgccgatgaacggcccaaccca 15306451
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 27       taataataatttacatacatatgca 51
                ||||||||| |||||||||||||||
Sbjct: 15861488 taataataacttacatacatatgca 15861464



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 336     gccgcggctcttgaagggga 355
               ||||||||||||||||||||
Sbjct: 6211026 gccgcggctcttgaagggga 6211045
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>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_A06
          Length = 111673

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 375   gtggtagatcgccgccagcgccgcgccgatgaacggtcccaccca 419
             |||||| | |||||| | |||||||||||||||||| || |||||
Sbjct: 13494 gtggtacagcgccgcgatcgccgcgccgatgaacggcccaaccca 13450
to top
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0475E07
          Length = 139961

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 375   gtggtagatcgccgccagcgccgcgccgatgaacggtcccaccca 419
             |||||| | |||||| | |||||||||||||||||| || |||||
Sbjct: 92508 gtggtacagcgccgcgatcgccgcgccgatgaacggcccaaccca 92464
to top
>dbj|AK072632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132K03, full
           insert sequence
          Length = 1215

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 375 gtggtagatcgccgccagcgccgcgccgatgaacggtcccaccca 419
           |||||| | |||||| | |||||||||||||||||| || |||||
Sbjct: 898 gtggtacagcgccgcgatcgccgcgccgatgaacggcccaaccca 854
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>emb|CR361565.8| Zebrafish DNA sequence from clone CH211-242L1 in linkage group 22,
             complete sequence
          Length = 164475

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 28    aataataatttacatacatat 48
             |||||||||||||||||||||
Sbjct: 30255 aataataatttacatacatat 30275
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 150     ggcgacgctgccggcaggcac 170
               |||||||||||||||||||||
Sbjct: 2595820 ggcgacgctgccggcaggcac 2595840
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>emb|BX005014.5| Zebrafish DNA sequence from clone CH211-103E2 in linkage group 10,
             complete sequence
          Length = 160621

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    taataataatttacatacata 47
             |||||||||||||||||||||
Sbjct: 47614 taataataatttacatacata 47634
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>dbj|AB020209.1| Rattus norvegicus mRNA for multidrug resistance protein (MRP5),
            complete cds
          Length = 5744

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 355  atcgccctgatcaccaccacg 375
            |||||||||||||||||||||
Sbjct: 3461 atcgccctgatcaccaccacg 3481
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>ref|XM_476112.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 753

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 336 gccgcggctcttgaagggga 355
           ||||||||||||||||||||
Sbjct: 354 gccgcggctcttgaagggga 335
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>gb|AC167665.2| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940135D9, complete sequence
          Length = 93659

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   gatcgccgccagcgccgcgc 400
             ||||||||||||||||||||
Sbjct: 93532 gatcgccgccagcgccgcgc 93513
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 384     cgccgccagcgccgcgccga 403
               ||||||||||||||||||||
Sbjct: 2703938 cgccgccagcgccgcgccga 2703957
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 381    gatcgccgccagcgccgcgccgat 404
              |||| |||||||||||||||||||
Sbjct: 708311 gatctccgccagcgccgcgccgat 708334
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>gb|AC130732.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0708D12,
             complete sequence
          Length = 172647

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   gccgcggctcttgaagggga 355
             ||||||||||||||||||||
Sbjct: 41381 gccgcggctcttgaagggga 41400
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>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 216676

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   cagatttgagaactattaca 209
             ||||||||||||||||||||
Sbjct: 46344 cagatttgagaactattaca 46325
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>gb|AC166171.2| Mus musculus BAC clone RP23-136L14 from chromosome 16, complete
             sequence
          Length = 199601

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    tgcgtggtactggtacaatg 88
             ||||||||||||||||||||
Sbjct: 64904 tgcgtggtactggtacaatg 64885
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>gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4,
            complete sequence
          Length = 183648

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 27   taataataatttacatacat 46
            ||||||||||||||||||||
Sbjct: 3763 taataataatttacatacat 3744
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>gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome 15, complete sequence
          Length = 233904

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     ttaataataatttacatacatatg 49
              ||||||||||| ||||||||||||
Sbjct: 205619 ttaataataatatacatacatatg 205596
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>gb|AC160125.2| Mus musculus BAC clone RP23-317M11 from chromosome 9, complete sequence
          Length = 209835

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     tgcgtggtactggtacaatg 88
              ||||||||||||||||||||
Sbjct: 199385 tgcgtggtactggtacaatg 199366
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 387     cgccagcgccgcgccgatga 406
               ||||||||||||||||||||
Sbjct: 4160264 cgccagcgccgcgccgatga 4160245
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>emb|Y17691.1|XCT17691 Xanthomonas campestris Tn5044 transposon
          Length = 10840

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 384 cgccgccagcgccgcgccgatgaa 407
           |||| |||||||||||||||||||
Sbjct: 882 cgccaccagcgccgcgccgatgaa 859
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>emb|BX511098.5| Zebrafish DNA sequence from clone CH211-202L3 in linkage group 5,
             complete sequence
          Length = 72481

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    ttcttaataataatttacat 42
             ||||||||||||||||||||
Sbjct: 25089 ttcttaataataatttacat 25108
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>gb|AC104511.5| Drosophila melanogaster X BAC RP98-39D14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 166000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     taataataatttacatacat 46
              ||||||||||||||||||||
Sbjct: 100924 taataataatttacatacat 100943
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>gb|AE005860.1| Caulobacter crescentus CB15 section 186 of 359 of the complete genome
          Length = 11137

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 374  cgtggtagatcgccgccagcgccgcgcc 401
            |||||||||||| |||||||| ||||||
Sbjct: 9054 cgtggtagatcggcgccagcggcgcgcc 9081
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>emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, complete sequence
          Length = 207067

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 384    cgccgccagcgccgcgccgatgaa 407
              |||| |||||||||||||||||||
Sbjct: 174840 cgccaccagcgccgcgccgatgaa 174817
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>gb|AC013553.14| Homo sapiens chromosome 15, clone RP11-325L12, complete sequence
          Length = 184864

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    tgcaaaaggtaggggaagta 106
             ||||||||||||||||||||
Sbjct: 47087 tgcaaaaggtaggggaagta 47068
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 383     tcgccgccagcgccgcgccg 402
               ||||||||||||||||||||
Sbjct: 4115711 tcgccgccagcgccgcgccg 4115730
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>emb|BX004760.10| Zebrafish DNA sequence from clone CH211-222O4 in linkage group 3,
             complete sequence
          Length = 190220

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    taataataatttacatacat 46
             ||||||||||||||||||||
Sbjct: 69241 taataataatttacatacat 69260
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>gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, region 90A-90A, BAC clone
              BACR48C05, complete sequence
          Length = 164450

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     tacatacatatgcacgctgg 57
              ||||||||||||||||||||
Sbjct: 141958 tacatacatatgcacgctgg 141939
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>gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 184696

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   cagatttgagaactattaca 209
             ||||||||||||||||||||
Sbjct: 18168 cagatttgagaactattaca 18187
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>gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosome 15, complete
             sequence
          Length = 198559

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 26    ttaataataatttacatacatatg 49
             ||||||||||| ||||||||||||
Sbjct: 83579 ttaataataatatacatacatatg 83602
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 383     tcgccgccagcgccgcgccg 402
               ||||||||||||||||||||
Sbjct: 3230880 tcgccgccagcgccgcgccg 3230899
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 387     cgccagcgccgcgccgatga 406
               ||||||||||||||||||||
Sbjct: 1521793 cgccagcgccgcgccgatga 1521774
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 384     cgccgccagcgccgcgccga 403
               ||||||||||||||||||||
Sbjct: 5795700 cgccgccagcgccgcgccga 5795719
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>emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, complete sequence
          Length = 169897

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    ttcttaataataatttacat 42
             ||||||||||||||||||||
Sbjct: 69809 ttcttaataataatttacat 69790
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>dbj|AK110599.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-G03, full
           insert sequence
          Length = 853

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 336 gccgcggctcttgaagggga 355
           ||||||||||||||||||||
Sbjct: 97  gccgcggctcttgaagggga 116
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>dbj|AK110596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-F12, full
           insert sequence
          Length = 1272

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 336 gccgcggctcttgaagggga 355
           ||||||||||||||||||||
Sbjct: 538 gccgcggctcttgaagggga 519
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>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4,
             complete sequence
          Length = 99176

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    taataataatttacatacat 46
             ||||||||||||||||||||
Sbjct: 76094 taataataatttacatacat 76075
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>gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55 of 118 of the complete
              sequence
          Length = 217725

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     tacatacatatgcacgctgg 57
              ||||||||||||||||||||
Sbjct: 123669 tacatacatatgcacgctgg 123650
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>gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 of 74 of the complete
             sequence
          Length = 332030

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    taataataatttacatacat 46
             ||||||||||||||||||||
Sbjct: 23638 taataataatttacatacat 23619
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>emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on chromosome 9, complete
              sequence
          Length = 203615

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     tgcgtggtactggtacaatg 88
              ||||||||||||||||||||
Sbjct: 196039 tgcgtggtactggtacaatg 196058
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 145     gaacaggcgacgctgccggc 164
               ||||||||||||||||||||
Sbjct: 1380459 gaacaggcgacgctgccggc 1380478
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>emb|BX005187.9| Mouse DNA sequence from clone RP23-187O10 on chromosome X, complete
             sequence
          Length = 98612

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    tgcgtggtactggtacaatg 88
             ||||||||||||||||||||
Sbjct: 32191 tgcgtggtactggtacaatg 32172
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>gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, complete sequence
          Length = 174162

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    tgcgtggtactggtacaatg 88
             ||||||||||||||||||||
Sbjct: 50679 tgcgtggtactggtacaatg 50660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,203,516
Number of Sequences: 3902068
Number of extensions: 3203516
Number of successful extensions: 71736
Number of sequences better than 10.0: 95
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70174
Number of HSP's gapped (non-prelim): 1560
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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