>YGGC_ECOLI (P11664) Hypothetical protein yggC|
          Length = 237

 Score = 62.8 bits (151), Expect = 6e-10
 Identities = 35/106 (33%), Positives = 56/106 (52%)
 Frame = -1

Query: 536 PSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDVSMQ 357
           P +D    DPVE+ + V     +VIVEGN+LLL+++ W E+ +  D   FI     +  +
Sbjct: 126 PQYDRQKHDPVEDALHVTAP--LVIVEGNWLLLDDEKWLELASFCDFSIFIHAPAQILRE 183

Query: 356 RVLQRHIGTGKEPDVAAWRISYNDRPNAELILESKRAADLVIRSVD 219
           R++ R I  G    VA    +  D PN E +L + R A+L++   +
Sbjct: 184 RLISRKIAGGLTRQVAEAFYARTDGPNVERVLMNSRQANLIVEMTE 229

>YFH7_YEAST (P43591) Hypothetical 39.9 kDa protein in MPR1-GCN20 intergenic|
           region
          Length = 353

 Score = 52.8 bits (125), Expect = 6e-07
 Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEK-----WFID 381
           ++ P F+H + DP  +   +    +IVI+EG YLL +++ W++I     +      + ID
Sbjct: 237 IFVPGFNHALKDPTPDQYCISKFTRIVILEGLYLLYDQENWKKIYKTLADTGALLVYKID 296

Query: 380 IDIDVSMQRVLQRHIGTGKEPDVAAWR 300
           ID + + +RV +RH+ +G    +A  R
Sbjct: 297 IDYEATEERVAKRHLQSGLVTTIAEGR 323

>URK_CLOTE (Q896E3) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 209

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDV 366
           V  P +D  + +       V+P  +I+IVEG  L+LEE   +EIR++ D K ++D D DV
Sbjct: 83  VEKPIYDFELHNRKNETEIVEPT-EIIIVEG-ILVLEE---KEIRDLLDIKIYVDTDADV 137

Query: 365 SMQRVLQRHI-GTGKEPDVAAWRISYNDRP-NAELILESKRAADLVI 231
            + R L R I   G+  D    +     RP + + I  SKR AD++I
Sbjct: 138 RIIRRLVRDIKERGRSLDSVINQYLNVVRPMHMQFIEPSKRYADIII 184

>URK_CLOPE (Q8XJI6) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 208

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 26/70 (37%), Positives = 42/70 (60%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDV 366
           +  PS+D  + + +E+   V+P+ +IVIVEG  L+LE+     IR + D K ++D D DV
Sbjct: 82  IQKPSYDFSIHNRIEDTTKVEPK-EIVIVEG-ILILEDP---RIRELLDIKIYVDTDADV 136

Query: 365 SMQRVLQRHI 336
            + R + R I
Sbjct: 137 RIIRRMVRDI 146

>URK_CHLPN (Q9Z7H0) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 222

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 30/107 (28%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDV 366
           V AP FD  +G+  + +I      K+++VEG  +L+ E+  +E+R++ D + F+D D D 
Sbjct: 83  VQAPVFDFVLGNRSKTEIETIYPSKVILVEG--ILVFEN--QELRDLMDIRIFVDTDADE 138

Query: 365 SMQRVLQRHI-GTGKEPDVAAWRISYNDRPNAELILE-SKRAADLVI 231
            + R + R +   G   D    R     +P  E  +E +++ AD+++
Sbjct: 139 RILRRMVRDVQEQGDSVDCIMSRYLSMVKPMHEKFIEPTRKYADIIV 185

>UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine|
           monophosphokinase 1) (Cytidine monophosphokinase 1)
          Length = 277

 Score = 37.4 bits (85), Expect = 0.028
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDV 366
           V  P++D      +     V P   +V+ EG  +   +    EIR+MF  + F+D D DV
Sbjct: 110 VEVPTYDFVTHSRLPETTVVYPAD-VVLFEGILVFYSQ----EIRDMFHLRLFVDTDSDV 164

Query: 365 SMQRVLQRHIGTGKEPDVAAWRISYNDRPN-AELILESKRAADLVI-RSVD 219
            + R + R +  G++ +    + +   +P   E  L +K+ AD++I R VD
Sbjct: 165 RLSRRVLRDVRRGRDLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVD 215

>URK1_YEAST (P27515) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
          Length = 501

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
 Frame = -1

Query: 470 IVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDVSMQRVLQRHI-GTGKEPDVAAWRIS 294
           +V++EG Y L +    R + ++ D K ++D D+DV + R L R I   G++ D    +  
Sbjct: 161 VVVIEGIYALYD----RRLLDLMDLKIYVDADLDVCLARRLSRDIVSRGRDLDGCIQQWE 216

Query: 293 YNDRPNA-ELILESKRAADLVIRSV 222
              +PNA + +  + + AD +I S+
Sbjct: 217 KFVKPNAVKFVKPTMKNADAIIPSM 241

>UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine|
           monophosphokinase 1) (Cytidine monophosphokinase 1)
          Length = 277

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDV 366
           V  P++D      +     V P   +V+ EG  +   +    EIR+MF  + F+D D DV
Sbjct: 110 VEVPTYDFVTHSRLPETTVVYPAD-VVLFEGILVFYTQ----EIRDMFHLRLFVDTDSDV 164

Query: 365 SMQRVLQRHIGTGKEPDVAAWRISYNDRPN-AELILESKRAADLVI-RSVD 219
            + R + R +  G++ +    + +   +P   E  L +K+ AD++I R VD
Sbjct: 165 RLSRRVLRDVQRGRDLEQILTQYTAFVKPAFEEFCLPTKKYADVIIPRGVD 215

>URK_HAEDU (Q7VL27) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 217

 Score = 36.2 bits (82), Expect = 0.062
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDV 366
           +  P +D+   +   +    +P+ KI+I+EG  LL  E     IRN  +   F+D  +D+
Sbjct: 92  IQIPEYDYAKHNRKTSSKHFEPK-KIIILEGILLLTHET----IRNEINVSIFVDAPLDI 146

Query: 365 SMQRVLQRH-IGTGKEPDVAAWRISYNDRPN-AELILESKRAADLVI 231
              R LQR  I  G+  D    +     RP   + I  SK+ AD++I
Sbjct: 147 CFIRRLQRDLIERGRSMDSVISQCRKTVRPMFLKFIEPSKQYADIII 193

>URK_LACPL (Q88WR0) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 209

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
 Frame = -1

Query: 536 PSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDVSMQ 357
           P +D+      +  I  +P+  ++IVEG  L+L++   + +R++ D K F+D D D+ + 
Sbjct: 90  PVYDYEQYTRSDKTIHQEPRD-VIIVEG-VLILDD---QRLRDLMDIKVFVDTDDDIRII 144

Query: 356 RVLQRHI-GTGKEPDVAAWRISYNDRPNAELILE-SKRAADLVI 231
           R +QR I   G+  D    +     +P     +E +KR ADL++
Sbjct: 145 RRIQRDIKERGRTLDSVIGQYLATVKPMYHQFVEPTKRYADLIV 188

>UCK2_HUMAN (Q9BZX2) Uridine-cytidine kinase 2 (EC 2.7.1.48) (UCK 2) (Uridine|
           monophosphokinase 2) (Cytidine monophosphokinase 2)
          Length = 261

 Score = 33.1 bits (74), Expect = 0.52
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDV 366
           V  P +D       E  + V P   +V+ EG      +    E+R++F  K F+D D D 
Sbjct: 107 VQIPVYDFVSHSRKEETVTVYPAD-VVLFEGILAFYSQ----EVRDLFQMKLFVDTDADT 161

Query: 365 SMQRVLQRHIG-TGKE-PDVAAWRISYNDRPNAELILESKRAADLVI-RSVDYL 213
            + R + R I   G++   + +  I++      E  L +K+ AD++I R  D L
Sbjct: 162 RLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNL 215

>UCK2_MOUSE (Q99PM9) Uridine-cytidine kinase 2 (EC 2.7.1.48) (UCK 2) (Uridine|
           monophosphokinase 2) (Cytidine monophosphokinase 2)
          Length = 261

 Score = 32.7 bits (73), Expect = 0.68
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDV 366
           V  P +D       E  + + P   +V+ EG      +    E+R++F  K F+D D D 
Sbjct: 107 VQIPVYDFVSHSRKEETVTIYPAD-VVLFEGILAFYSQ----EVRDLFQMKLFVDTDADT 161

Query: 365 SMQRVLQRHIG-TGKE-PDVAAWRISYNDRPNAELILESKRAADLVI-RSVDYL 213
            + R + R I   G++   + +  I++      E  L +K+ AD++I R  D L
Sbjct: 162 RLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCLPTKKYADVIIPRGADNL 215

>COAA_ENTFA (Q839J7) Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid|
           kinase)
          Length = 307

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEG-NYLLLEEDVWREIRNMFDEKWFIDID 375
           + AP + H V D +E +  +  Q  I+IVEG N L L  +    + + FD   F+D D
Sbjct: 165 IKAPVYSHSVYDVIEGEYELIQQPDILIVEGINTLQLPANQQIYVSDFFDFSIFVDAD 222

>COAE_THETN (Q8RBE5) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 201

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 14/48 (29%), Positives = 31/48 (64%)
 Frame = -1

Query: 485 KPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDVSMQRVLQR 342
           K + K+++++   LL+E  +++    + DE W + +DID  ++RV++R
Sbjct: 103 KDKDKVIVIDAA-LLIETGLYK----LVDEVWLVVVDIDTQIKRVMER 145

>URK_HAEIN (P44533) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 213

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
 Frame = -1

Query: 473 KIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDVSMQRVLQRHI---GTGKEPDVAAW 303
           +IVI+EG  LL +E     +R + D   F+D  +D+   R LQR +   G   +  +  +
Sbjct: 111 RIVILEGILLLTDE----RVRQLADISVFVDTPLDICFIRRLQRDMEERGRSLQSVIDQY 166

Query: 302 RISYNDRPN-AELILESKRAADLVI 231
           R +   RP   + I  SK+ AD+VI
Sbjct: 167 RATV--RPMFLQFIEPSKQYADIVI 189

>URK_DEIRA (Q9RXZ5) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 210

 Score = 32.3 bits (72), Expect = 0.89
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = -1

Query: 473 KIVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDVS-MQRVLQRHIGTGKEPDVAAWRI 297
           ++V++EG + L +E    E+R+    K F+D D DV  ++R+L+     G+ P+    + 
Sbjct: 108 RVVVLEGFFALYDE----ELRSRMGLKVFVDADADVRFIRRLLRDTQERGRTPESVIEQY 163

Query: 296 SYNDRP-NAELILESKRAADLVI 231
               RP +   +  +KR AD++I
Sbjct: 164 LGFVRPMHLSFVEPTKRYADVII 186

>COAA_BACHD (Q9K8X7) Pantothenate kinase (EC 2.7.1.33) (Pantothenic acid|
           kinase)
          Length = 316

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -1

Query: 545 VYAPSFDHGVGDPVENDIFVKPQHKIVIVEGNYLLLEEDVWREIRNMFDEKWF-IDIDID 369
           V AP + H   + VE D  V  +  IVIVEG  +L        I N+F   +F   I +D
Sbjct: 170 VKAPVYSHLTYNIVEGDYQVVHEPDIVIVEGINVLQVNKRNHHIPNVFVSDFFDFSIYVD 229

Query: 368 VSMQRVLQRHI 336
              +++LQ +I
Sbjct: 230 AKEEQILQWYI 240

>GID7_YEAST (P25569) Glucose-induced degradation protein 7|
          Length = 759

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = -1

Query: 512 DPVENDIFVKPQHKIVIVEGNY---LLLEEDVWREIRNMFDEKWFI 384
           DP ++  F  P H+I +++ N+   L +    W+ I++  DE WF+
Sbjct: 299 DPDDDASFSSPPHRINLLQDNFSHDLTVTFQEWKTIQDTTDEIWFL 344

>SEC1A_ARATH (Q9C5P7) Protein transport Sec1a (AtSec1a)|
          Length = 611

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -1

Query: 368 VSMQRVLQRHIGTGKEPDVAAWRISYNDRPNAELILESKRAADLVIRSV 222
           +S  R+L   +G+ K  D  AW+I   DR   +++ +S + AD+  + +
Sbjct: 24  ISRDRLLHEMLGSTKTGDSKAWKILIMDRVTVKVMSQSCKMADITDQGI 72

>URK_BORBU (Q59190) Uridine kinase (EC 2.7.1.48) (Uridine monophosphokinase)|
           (Cytidine monophosphokinase)
          Length = 205

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 18/45 (40%), Positives = 26/45 (57%)
 Frame = -1

Query: 470 IVIVEGNYLLLEEDVWREIRNMFDEKWFIDIDIDVSMQRVLQRHI 336
           +VIVEG  + +EE     +RN+ D K +ID   D+   R L+R I
Sbjct: 100 VVIVEGIMIFVEE----RVRNLIDLKIYIDTPNDIRFIRRLRRDI 140

>TOP6A_SULSH (O05208) Type II DNA topoisomerase VI subunit A (EC 5.99.1.3)|
          Length = 389

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = -1

Query: 509 PVENDIFVKPQHKIVI--VEGNYLLLEEDVWREIRNMFDEKWFIDIDIDVSMQR 354
           P   D++ + +H +++  +EGN ++ EE+ W E +    +   +DI++  S+ R
Sbjct: 99  PTIRDLYYRGKHSLLLKSIEGNKIVSEENTWDEQKE--SDSVIVDIEVFTSLLR 150

>YGK9_YEAST (P53138) Hypothetical 12.4 kDa protein in TAF60-MLC1 intergenic|
           region
          Length = 107

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 371 QCQCQ*TISHRTCF*FPSKH 430
           Q  C+ ++SH++CF FPS+H
Sbjct: 39  QYYCRRSLSHKSCFPFPSQH 58

>MYT1_MOUSE (Q8CFC2) Myelin transcription factor 1 (MyT1) (Neural zinc finger|
           factor 2) (NZF-2)
          Length = 1127

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 103 ITIDSIGQLTSSMYKHRHRDPIITKNQNCHQKHGI 207
           I +D  G L  SM+KHR R+     + +C    G+
Sbjct: 663 IEVDENGTLDLSMHKHRKRENTFPSSSSCSSSPGV 697

>MYT1_HUMAN (Q01538) Myelin transcription factor 1 (MyT1) (MyTI) (Proteolipid|
           protein-binding protein) (PLPB1)
          Length = 1121

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 103 ITIDSIGQLTSSMYKHRHRDPIITKNQNCHQKHGI 207
           I +D  G L  SM+KHR R+     + +C    G+
Sbjct: 661 IEVDENGTLDLSMHKHRKRENAFPSSSSCSSSPGV 695


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,549,165
Number of Sequences: 219361
Number of extensions: 1656633
Number of successful extensions: 3755
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3753
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4373119116
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)