ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart17e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK059928.1| Oryza sativa (japonica cultivar-group) cDNA clon... 353 4e-94
2gb|AY107071.1| Zea mays PCO084702 mRNA sequence 341 1e-90
3gb|BT023989.1| Zea mays clone EL01N0413B12 mRNA sequence 325 9e-86
4dbj|AK073304.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
5gb|BT019127.1| Zea mays clone Contig742.F mRNA sequence 216 6e-53
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 90 9e-15
7gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 90 9e-15
8emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb... 90 9e-15
9gb|AC153899.3| Mus musculus BAC RP23-128C4 (Roswell Park Cancer... 44 0.47
10gb|BC059502.1| Danio rerio zgc:73140, mRNA (cDNA clone MGC:73140... 42 1.9
11gb|AE017245.1| Mycoplasma synoviae 53, complete genome 42 1.9
12emb|BX571724.9| Zebrafish DNA sequence from clone CH211-165B19 i... 42 1.9
13gb|BC062838.1| Danio rerio hydroxysteroid dehydrogenase like 2, ... 42 1.9
14ref|NM_199599.2| Danio rerio hydroxysteroid dehydrogenase like 2... 42 1.9
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
16gb|AC020594.6| Homo sapiens BAC clone RP11-322P19 from 2, comple... 42 1.9
17dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
18dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
19emb|AJ276675.1|SAV276675 Stagonospora avenae bgl1 gene for beta-... 42 1.9
20emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete ch... 42 1.9
21gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, com... 40 7.4
22gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, comp... 40 7.4
23gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome 40 7.4
24emb|CR628410.11| Zebrafish DNA sequence from clone CH211-198D23 ... 40 7.4
25gb|AC122899.2| Mus musculus BAC clone RP23-74L7 from 3, complete... 40 7.4
26gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 40 7.4
27emb|AL157937.21| Human DNA sequence from clone RP11-408N14 on ch... 40 7.4
28gb|AC124917.4| Homo sapiens chromosome 1 clone RP5-910L7, comple... 40 7.4
29emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277... 40 7.4
30emb|AL109838.11|HSDJ796I8 Human DNA sequence from clone RP4-796I... 40 7.4
31emb|AL031053.1|HS267M20 Human DNA sequence from clone RP1-267M20... 40 7.4
32gb|AY509253.1| Ostreid herpesvirus 1, complete genome 40 7.4
33emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BA... 40 7.4
34emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BA... 40 7.4
35emb|BX936331.6| Zebrafish DNA sequence from clone CH211-1C10 in ... 40 7.4
36emb|CR407704.10| Zebrafish DNA sequence from clone CH211-195G8 i... 40 7.4
37emb|BX572620.15| Zebrafish DNA sequence from clone CH211-202G13 ... 40 7.4
38gb|AC091936.2| Homo sapiens chromosome 5 clone RP11-325C20, comp... 40 7.4
39emb|AL844587.19| Zebrafish DNA sequence from clone DKEY-7E14 in ... 40 7.4
40dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 40 7.4
41gb|AC092284.2| Homo sapiens chromosome 5 clone CTD-2160D9, compl... 40 7.4
42emb|BX833630.1|CNS09Z4W Arabidopsis thaliana Full-length cDNA Co... 40 7.4
43gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cance... 40 7.4
44gb|AC156541.7| Mus musculus chromosome 1, clone RP23-478I8, comp... 40 7.4
45gb|AC109638.2| Homo sapiens BAC clone RP11-495B16 from 2, comple... 40 7.4
46gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome 40 7.4
47gb|AC022471.8|AC022471 Genomic Sequence For Homo sapiens Clone 2... 40 7.4
48dbj|AB006701.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 7.4
49gb|AC124191.4| Mus musculus BAC clone RP23-275E4 from 18, comple... 40 7.4
50gb|AC101783.12| Mus musculus chromosome 1, clone RP24-136B19, co... 40 7.4
51gb|AY449458.1| Oikopleura dioica clone BACOIKO002 4xj18, complet... 40 7.4
52gb|AC074042.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 7.4 
>dbj|AK059928.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-A06, full
            insert sequence
          Length = 1256

 Score =  353 bits (178), Expect = 4e-94
 Identities = 289/326 (88%)
 Strand = Plus / Minus

                                                                        
Query: 220  tccaccgatctgattacaagatctgcagccctttttgactccaagataagctcagcattc 279
            |||||||||||||||||||||||||||| | ||||||||| || ||||||||| || || 
Sbjct: 1043 tccaccgatctgattacaagatctgcagacttttttgacttcatgataagctctgcgttt 984

                                                                        
Query: 280  ggccggtcgttgtatgaaatccgccatgctgctacatctggctctttccctgtgccaata 339
            |||||||| || || || ||||||||||||||||||||||||||||| |||||| | | |
Sbjct: 983  ggccggtcattatacgagatccgccatgctgctacatctggctcttttcctgtggcgaca 924

                                                                        
Query: 340  tgtctctggagcactctttgcatcgagacatcaatgtcaatgtcaatgaaccatttctca 399
            ||||||||||||||||||||||| ||||||||||||||||| || || |||||||| |||
Sbjct: 923  tgtctctggagcactctttgcatggagacatcaatgtcaatatcgataaaccatttttca 864

                                                                        
Query: 400  tcgaacatgtttctaatttccctccaaacatcttcttccagtaataaataattcccttcg 459
            || |||| |  |||||| ||||||||  |||||||||||||||||| |||||| ||||||
Sbjct: 863  tcaaacaaggctctaatgtccctccaggcatcttcttccagtaatagataattgccttcg 804

                                                                        
Query: 460  acgatcactattttgtgctgcggttttacaaatatgtcattctctactgggtcaccaaca 519
            || |||||||||||||| ||||| ||||||||||||||||| || ||||| |||||||||
Sbjct: 803  acaatcactattttgtgttgcggctttacaaatatgtcattttcaactggatcaccaaca 744

                                      
Query: 520  ccatgatcgaatgatggagcgtaaac 545
            |||||||| ||||||||||| |||||
Sbjct: 743  ccatgatcaaatgatggagcataaac 718
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>gb|AY107071.1| Zea mays PCO084702 mRNA sequence
          Length = 992

 Score =  341 bits (172), Expect = 1e-90
 Identities = 262/292 (89%)
 Strand = Plus / Minus

                                                                       
Query: 254 ttgactccaagataagctcagcattcggccggtcgttgtatgaaatccgccatgctgcta 313
           |||| |||| ||||||||| |||||||| ||||||||||| || |||| |||||||||||
Sbjct: 706 ttgattccaggataagctctgcattcggtcggtcgttgtaggagatcctccatgctgcta 647

                                                                       
Query: 314 catctggctctttccctgtgccaatatgtctctggagcactctttgcatcgagacatcaa 373
           ||||||||||||| || ||  |||||||||||| ||||||||||||||| |||| |||||
Sbjct: 646 catctggctcttttccggttgcaatatgtctcttgagcactctttgcatggagatatcaa 587

                                                                       
Query: 374 tgtcaatgtcaatgaaccatttctcatcgaacatgtttctaatttccctccaaacatctt 433
           |||||||||||||||||||||||||||| |||| || |||||||||  ||||||||||||
Sbjct: 586 tgtcaatgtcaatgaaccatttctcatcaaacaagtctctaatttcggtccaaacatctt 527

                                                                       
Query: 434 cttccagtaataaataattcccttcgacgatcactattttgtgctgcggttttacaaata 493
           |||||||||| | ||| |||||||| || ||||||||||||||||| || ||||||||||
Sbjct: 526 cttccagtaacagatagttcccttcaactatcactattttgtgctgtggctttacaaata 467

                                                               
Query: 494 tgtcattctctactgggtcaccaacaccatgatcgaatgatggagcgtaaac 545
           |||||||||| |||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 466 tgtcattctcaactgggtcgccaacaccatgatcaaatgatggagcataaac 415
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>gb|BT023989.1| Zea mays clone EL01N0413B12 mRNA sequence
          Length = 1299

 Score =  325 bits (164), Expect = 9e-86
 Identities = 260/292 (89%)
 Strand = Plus / Minus

                                                                        
Query: 254  ttgactccaagataagctcagcattcggccggtcgttgtatgaaatccgccatgctgcta 313
            |||| |||| ||||||||| |||||||| ||||||||||| || |||| |||||||||||
Sbjct: 1026 ttgattccaggataagctctgcattcggtcggtcgttgtaggagatcctccatgctgcta 967

                                                                        
Query: 314  catctggctctttccctgtgccaatatgtctctggagcactctttgcatcgagacatcaa 373
            ||||||||||||| || |   |||||||||||| ||||||||||||||| |||| |||||
Sbjct: 966  catctggctcttttccgggtgcaatatgtctcttgagcactctttgcatggagatatcaa 907

                                                                        
Query: 374  tgtcaatgtcaatgaaccatttctcatcgaacatgtttctaatttccctccaaacatctt 433
            || ||||||||||||||||||||||||| |||| || |||||||||  ||||||||||||
Sbjct: 906  tggcaatgtcaatgaaccatttctcatcaaacaagtctctaatttcggtccaaacatctt 847

                                                                        
Query: 434  cttccagtaataaataattcccttcgacgatcactattttgtgctgcggttttacaaata 493
            |||||||||| | ||| |||||||| || ||||||||||||||||| || ||||||||||
Sbjct: 846  cttccagtaacagatagttcccttcaactatcactattttgtgctgtggctttacaaata 787

                                                                
Query: 494  tgtcattctctactgggtcaccaacaccatgatcgaatgatggagcgtaaac 545
            |||||||||| |||||||| |||||||||||||| ||||||||||| |||||
Sbjct: 786  tgtcattctcaactgggtcgccaacaccatgatcaaatgatggagcataaac 735
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>dbj|AK073304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026B21, full
            insert sequence
          Length = 1693

 Score =  272 bits (137), Expect = 1e-69
 Identities = 227/257 (88%)
 Strand = Plus / Minus

                                                                        
Query: 220  tccaccgatctgattacaagatctgcagccctttttgactccaagataagctcagcattc 279
            |||||||||||||||||||||||||||| | ||||||||| || ||||||||| || || 
Sbjct: 1483 tccaccgatctgattacaagatctgcagacttttttgacttcatgataagctctgcgttt 1424

                                                                        
Query: 280  ggccggtcgttgtatgaaatccgccatgctgctacatctggctctttccctgtgccaata 339
            |||||||| || || || ||||||||||||||||||||||||||||| |||||| | | |
Sbjct: 1423 ggccggtcattatacgagatccgccatgctgctacatctggctcttttcctgtggcgaca 1364

                                                                        
Query: 340  tgtctctggagcactctttgcatcgagacatcaatgtcaatgtcaatgaaccatttctca 399
            ||||||||||||||||||||||| ||||||||||||||||| || || |||||||| |||
Sbjct: 1363 tgtctctggagcactctttgcatggagacatcaatgtcaatatcgataaaccatttttca 1304

                                                                        
Query: 400  tcgaacatgtttctaatttccctccaaacatcttcttccagtaataaataattcccttcg 459
            || |||| |  |||||| ||||||||  |||||||||||||||||| |||||| ||||||
Sbjct: 1303 tcaaacaaggctctaatgtccctccaggcatcttcttccagtaatagataattgccttcg 1244

                             
Query: 460  acgatcactattttgtg 476
            || ||||||||||||||
Sbjct: 1243 acaatcactattttgtg 1227



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                       
Query: 477 ctgcggttttacaaatatgtcattctctactgggtcaccaacaccatgatcgaatgatgg 536
           |||||| ||||| ||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 746 ctgcggctttacgaatatgtcattttcaactggatcaccaacaccatgatcaaatgatgg 687

                    
Query: 537 agcgtaaac 545
           ||| |||||
Sbjct: 686 agcataaac 678
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>gb|BT019127.1| Zea mays clone Contig742.F mRNA sequence
          Length = 505

 Score =  216 bits (109), Expect = 6e-53
 Identities = 166/185 (89%)
 Strand = Plus / Minus

                                                                       
Query: 254 ttgactccaagataagctcagcattcggccggtcgttgtatgaaatccgccatgctgcta 313
           |||| |||| ||||||||| |||||||| ||||||||||| || |||| |||||||||||
Sbjct: 210 ttgattccaggataagctctgcattcggtcggtcgttgtaggagatcctccatgctgcta 151

                                                                       
Query: 314 catctggctctttccctgtgccaatatgtctctggagcactctttgcatcgagacatcaa 373
           ||||||||||||| || ||  |||||||||||| ||||||||||||||| |||| |||||
Sbjct: 150 catctggctcttttccggttgcaatatgtctcttgagcactctttgcatggagatatcaa 91

                                                                       
Query: 374 tgtcaatgtcaatgaaccatttctcatcgaacatgtttctaatttccctccaaacatctt 433
           |||||||||||||||||||||||||||| |||| || |||||||||  ||||||||||||
Sbjct: 90  tgtcaatgtcaatgaaccatttctcatcaaacaagtctctaatttcggtccaaacatctt 31

                
Query: 434 cttcc 438
           |||||
Sbjct: 30  cttcc 26
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 477      ctgcggttttacaaatatgtcattctctactgggtcaccaacaccatgatcgaatgatgg 536
                |||||| ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 25341748 ctgcggctttacaaatatgtcattttcaactggatcaccaacaccatgatcaaatgatgg 25341689

                         
Query: 537      agcgtaaac 545
                ||| |||||
Sbjct: 25341688 agcataaac 25341680



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                            
Query: 389      accatttctcatcgaacatgtttctaatttccctccaaacatcttcttccagtaataaat 448
                ||||||| ||||| |||| |  |||||| ||||||||  |||||||||||||||||| ||
Sbjct: 25342316 accatttttcatcaaacaaggctctaatgtccctccaggcatcttcttccagtaatagat 25342257

                                            
Query: 449      aattcccttcgacgatcactattttgtg 476
                |||| |||||||| ||||||||||||||
Sbjct: 25342256 aattgccttcgacaatcactattttgtg 25342229



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                            
Query: 220      tccaccgatctgattacaagatctgcagccctttttgactccaagataagctcagcattc 279
                |||||||||||||||||||||||||||| | ||||||||| || ||||||||| || || 
Sbjct: 25343116 tccaccgatctgattacaagatctgcagacttttttgacttcatgataagctctgcgttt 25343057

                        
Query: 280      ggccggtc 287
                ||||||||
Sbjct: 25343056 ggccggtc 25343049



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                          
Query: 339      atgtctctggagcactctttgcatcgagacatcaatgtcaat 380
                |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 25342573 atgtctctggagcactctttgcatggagacatcaatgtcaat 25342532



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 300      ccgccatgctgctacatctggctctttccctg 331
                ||||||||||||||||||||||||||| ||||
Sbjct: 25342704 ccgccatgctgctacatctggctcttttcctg 25342673
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 477      ctgcggttttacaaatatgtcattctctactgggtcaccaacaccatgatcgaatgatgg 536
                |||||| ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 25269924 ctgcggctttacaaatatgtcattttcaactggatcaccaacaccatgatcaaatgatgg 25269865

                         
Query: 537      agcgtaaac 545
                ||| |||||
Sbjct: 25269864 agcataaac 25269856



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                            
Query: 389      accatttctcatcgaacatgtttctaatttccctccaaacatcttcttccagtaataaat 448
                ||||||| ||||| |||| |  |||||| ||||||||  |||||||||||||||||| ||
Sbjct: 25270492 accatttttcatcaaacaaggctctaatgtccctccaggcatcttcttccagtaatagat 25270433

                                            
Query: 449      aattcccttcgacgatcactattttgtg 476
                |||| |||||||| ||||||||||||||
Sbjct: 25270432 aattgccttcgacaatcactattttgtg 25270405



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                            
Query: 220      tccaccgatctgattacaagatctgcagccctttttgactccaagataagctcagcattc 279
                |||||||||||||||||||||||||||| | ||||||||| || ||||||||| || || 
Sbjct: 25271292 tccaccgatctgattacaagatctgcagacttttttgacttcatgataagctctgcgttt 25271233

                        
Query: 280      ggccggtc 287
                ||||||||
Sbjct: 25271232 ggccggtc 25271225



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                          
Query: 339      atgtctctggagcactctttgcatcgagacatcaatgtcaat 380
                |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 25270749 atgtctctggagcactctttgcatggagacatcaatgtcaat 25270708



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 300      ccgccatgctgctacatctggctctttccctg 331
                ||||||||||||||||||||||||||| ||||
Sbjct: 25270880 ccgccatgctgctacatctggctcttttcctg 25270849
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>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 152914

 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                        
Query: 477  ctgcggttttacaaatatgtcattctctactgggtcaccaacaccatgatcgaatgatgg 536
            |||||| ||||||||||||||||| || ||||| ||||||||||||||||| ||||||||
Sbjct: 8558 ctgcggctttacaaatatgtcattttcaactggatcaccaacaccatgatcaaatgatgg 8499

                     
Query: 537  agcgtaaac 545
            ||| |||||
Sbjct: 8498 agcataaac 8490



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                        
Query: 389  accatttctcatcgaacatgtttctaatttccctccaaacatcttcttccagtaataaat 448
            ||||||| ||||| |||| |  |||||| ||||||||  |||||||||||||||||| ||
Sbjct: 9126 accatttttcatcaaacaaggctctaatgtccctccaggcatcttcttccagtaatagat 9067

                                        
Query: 449  aattcccttcgacgatcactattttgtg 476
            |||| |||||||| ||||||||||||||
Sbjct: 9066 aattgccttcgacaatcactattttgtg 9039



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 61/68 (89%)
 Strand = Plus / Minus

                                                                        
Query: 220  tccaccgatctgattacaagatctgcagccctttttgactccaagataagctcagcattc 279
            |||||||||||||||||||||||||||| | ||||||||| || ||||||||| || || 
Sbjct: 9926 tccaccgatctgattacaagatctgcagacttttttgacttcatgataagctctgcgttt 9867

                    
Query: 280  ggccggtc 287
            ||||||||
Sbjct: 9866 ggccggtc 9859



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                      
Query: 339  atgtctctggagcactctttgcatcgagacatcaatgtcaat 380
            |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 9383 atgtctctggagcactctttgcatggagacatcaatgtcaat 9342



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 300  ccgccatgctgctacatctggctctttccctg 331
            ||||||||||||||||||||||||||| ||||
Sbjct: 9514 ccgccatgctgctacatctggctcttttcctg 9483
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>gb|AC153899.3| Mus musculus  BAC RP23-128C4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 164582

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 427    acatcttcttccagtaataaat 448
              ||||||||||||||||||||||
Sbjct: 103858 acatcttcttccagtaataaat 103879
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>gb|BC059502.1| Danio rerio zgc:73140, mRNA (cDNA clone MGC:73140 IMAGE:4790907),
            complete cds
          Length = 1511

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 413  taatttccctccaaacatctt 433
            |||||||||||||||||||||
Sbjct: 1259 taatttccctccaaacatctt 1239
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>gb|AE017245.1| Mycoplasma synoviae 53, complete genome
          Length = 799476

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 169    attactaaaaatcaaaattgc 189
              |||||||||||||||||||||
Sbjct: 544860 attactaaaaatcaaaattgc 544880
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>emb|BX571724.9| Zebrafish DNA sequence from clone CH211-165B19 in linkage group 9,
              complete sequence
          Length = 174709

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 3      aataaaatgatataatgatta 23
              |||||||||||||||||||||
Sbjct: 139374 aataaaatgatataatgatta 139354
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>gb|BC062838.1| Danio rerio hydroxysteroid dehydrogenase like 2, mRNA (cDNA clone
            MGC:77693 IMAGE:6997528), complete cds
          Length = 1507

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 413  taatttccctccaaacatctt 433
            |||||||||||||||||||||
Sbjct: 1227 taatttccctccaaacatctt 1207
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>ref|NM_199599.2| Danio rerio hydroxysteroid dehydrogenase like 2 (hsdl2), mRNA
          Length = 1507

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 413  taatttccctccaaacatctt 433
            |||||||||||||||||||||
Sbjct: 1227 taatttccctccaaacatctt 1207
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 388      aaccatttctcatcgaacatg 408
                |||||||||||||||||||||
Sbjct: 28123757 aaccatttctcatcgaacatg 28123737
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>gb|AC020594.6| Homo sapiens BAC clone RP11-322P19 from 2, complete sequence
          Length = 193410

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 489   aaatatgtcattctctactgg 509
             |||||||||||||||||||||
Sbjct: 44896 aaatatgtcattctctactgg 44876
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>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0604E01
          Length = 159049

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 388    aaccatttctcatcgaacatg 408
              |||||||||||||||||||||
Sbjct: 121252 aaccatttctcatcgaacatg 121232
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>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0543D10
          Length = 134866

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 388  aaccatttctcatcgaacatg 408
            |||||||||||||||||||||
Sbjct: 7230 aaccatttctcatcgaacatg 7210
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>emb|AJ276675.1|SAV276675 Stagonospora avenae bgl1 gene for beta-glucosidase, exons 1-4
          Length = 6440

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 243  tgcagccctttttgactccaa 263
            |||||||||||||||||||||
Sbjct: 1082 tgcagccctttttgactccaa 1062
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>emb|AL591782.1|SME591782 Sinorhizobium meliloti 1021 complete chromosome; segment 1/12
          Length = 260050

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 367  acatcaatgtcaatgtcaatg 387
            |||||||||||||||||||||
Sbjct: 4763 acatcaatgtcaatgtcaatg 4743
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>gb|AC166288.7| Mus musculus chromosome 3, clone RP23-464M10, complete sequence
          Length = 183724

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    tattattactaaaaatcaaa 184
              ||||||||||||||||||||
Sbjct: 108272 tattattactaaaaatcaaa 108291
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>gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, complete sequence
          Length = 253738

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    ttttacaaatatgtcattct 502
              ||||||||||||||||||||
Sbjct: 149909 ttttacaaatatgtcattct 149890
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>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome
          Length = 1044459

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    catcaatgtcaatgtcaatg 387
              ||||||||||||||||||||
Sbjct: 534846 catcaatgtcaatgtcaatg 534865
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>emb|CR628410.11| Zebrafish DNA sequence from clone CH211-198D23 in linkage group 23,
             complete sequence
          Length = 172610

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     aaataaaatgatataatgat 21
             ||||||||||||||||||||
Sbjct: 83894 aaataaaatgatataatgat 83875
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>gb|AC122899.2| Mus musculus BAC clone RP23-74L7 from 3, complete sequence
          Length = 214857

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 483    ttttacaaatatgtcattct 502
              ||||||||||||||||||||
Sbjct: 186547 ttttacaaatatgtcattct 186528
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    ccatcagaaacatgggatct 208
              ||||||||||||||||||||
Sbjct: 432469 ccatcagaaacatgggatct 432488
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>emb|AL157937.21| Human DNA sequence from clone RP11-408N14 on chromosome 9 Contains a
             novel gene, complete sequence
          Length = 153783

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   cctattattactaaaaatca 182
             ||||||||||||||||||||
Sbjct: 78573 cctattattactaaaaatca 78592
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>gb|AC124917.4| Homo sapiens chromosome 1 clone RP5-910L7, complete sequence
          Length = 156168

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   caatgaaccatttctcatcg 402
             ||||||||||||||||||||
Sbjct: 70941 caatgaaccatttctcatcg 70922
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>emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277C14 on chromosome 1 Contains part
              of the DNM3 gene for dynamin 3, complete sequence
          Length = 155941

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 432    ttcttccagtaataaataat 451
              ||||||||||||||||||||
Sbjct: 137739 ttcttccagtaataaataat 137720
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>emb|AL109838.11|HSDJ796I8 Human DNA sequence from clone RP4-796I8 on chromosome 20 Contains a
             putative novel gene, ESTs, STSs and GSSs, complete
             sequence
          Length = 121235

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     aaaatgatataatgattaga 25
             ||||||||||||||||||||
Sbjct: 77080 aaaatgatataatgattaga 77061
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>emb|AL031053.1|HS267M20 Human DNA sequence from clone RP1-267M20 on chromosome Xq22.2-22.3,
            complete sequence
          Length = 167943

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 166  attattactaaaaatcaaaa 185
            ||||||||||||||||||||
Sbjct: 6867 attattactaaaaatcaaaa 6848
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>gb|AY509253.1| Ostreid herpesvirus 1, complete genome
          Length = 207439

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 414    aatttccctccaaacatctt 433
              ||||||||||||||||||||
Sbjct: 105016 aatttccctccaaacatctt 104997
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>emb|AL392174.1|ATF8L15 Arabidopsis thaliana DNA chromosome 5, BAC clone F8L15 (ESSA project)
          Length = 125411

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   ctgcggttttacaaatatgt 496
             ||||||||||||||||||||
Sbjct: 21440 ctgcggttttacaaatatgt 21459
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>emb|AL357612.1|ATT22D6 Arabidopsis thaliana DNA chromosome 5, BAC clone T22D6 (ESSA project)
          Length = 89988

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 477   ctgcggttttacaaatatgt 496
             ||||||||||||||||||||
Sbjct: 84291 ctgcggttttacaaatatgt 84310
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>emb|BX936331.6| Zebrafish DNA sequence from clone CH211-1C10 in linkage group 3, complete
              sequence
          Length = 163806

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    catcaatgtcaatgtcaatg 387
              ||||||||||||||||||||
Sbjct: 128648 catcaatgtcaatgtcaatg 128629
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>emb|CR407704.10| Zebrafish DNA sequence from clone CH211-195G8 in linkage group 17,
             complete sequence
          Length = 146938

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 481   ggttttacaaatatgtcatt 500
             ||||||||||||||||||||
Sbjct: 70847 ggttttacaaatatgtcatt 70828
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>emb|BX572620.15| Zebrafish DNA sequence from clone CH211-202G13 in linkage group 3,
              complete sequence
          Length = 199512

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    catcaatgtcaatgtcaatg 387
              ||||||||||||||||||||
Sbjct: 120195 catcaatgtcaatgtcaatg 120176
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>gb|AC091936.2| Homo sapiens chromosome 5 clone RP11-325C20, complete sequence
          Length = 89681

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 483   ttttacaaatatgtcattct 502
             ||||||||||||||||||||
Sbjct: 83729 ttttacaaatatgtcattct 83710
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>emb|AL844587.19| Zebrafish DNA sequence from clone DKEY-7E14 in linkage group 12,
             complete sequence
          Length = 254964

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 1     aaaataaaatgatataatgattagatac 28
             |||||||||||||| |||||| ||||||
Sbjct: 85128 aaaataaaatgataaaatgatcagatac 85155
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    ccatcagaaacatgggatct 208
              ||||||||||||||||||||
Sbjct: 763043 ccatcagaaacatgggatct 763024
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>gb|AC092284.2| Homo sapiens chromosome 5 clone CTD-2160D9, complete sequence
          Length = 107044

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 483  ttttacaaatatgtcattct 502
            ||||||||||||||||||||
Sbjct: 1470 ttttacaaatatgtcattct 1451
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>emb|BX833630.1|CNS09Z4W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL67ZA12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 550

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 477 ctgcggttttacaaatatgt 496
           ||||||||||||||||||||
Sbjct: 430 ctgcggttttacaaatatgt 449
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>gb|AC155278.5| Mus musculus 6 BAC RP24-141E2 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 202028

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     aaaataaaatgatataatga 20
             ||||||||||||||||||||
Sbjct: 57114 aaaataaaatgatataatga 57133
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>gb|AC156541.7| Mus musculus chromosome 1, clone RP23-478I8, complete sequence
          Length = 173297

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   atcaatgtcaatgtcaatga 388
             ||||||||||||||||||||
Sbjct: 90999 atcaatgtcaatgtcaatga 91018
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>gb|AC109638.2| Homo sapiens BAC clone RP11-495B16 from 2, complete sequence
          Length = 104787

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaaataaaatgatataatga 20
             ||||||||||||||||||||
Sbjct: 73784 aaaataaaatgatataatga 73765
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>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome
          Length = 1042519

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 368    catcaatgtcaatgtcaatg 387
              ||||||||||||||||||||
Sbjct: 532485 catcaatgtcaatgtcaatg 532504
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>gb|AC022471.8|AC022471 Genomic Sequence For Homo sapiens Clone 202M16 From Chromosome VI,
             complete sequence
          Length = 92144

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   cctattattactaaaaatca 182
             ||||||||||||||||||||
Sbjct: 58380 cctattattactaaaaatca 58399
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>dbj|AB006701.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOP9
          Length = 84194

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   tattattactaaaaatcaaa 184
             ||||||||||||||||||||
Sbjct: 80312 tattattactaaaaatcaaa 80331
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>gb|AC124191.4| Mus musculus BAC clone RP23-275E4 from 18, complete sequence
          Length = 203003

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    ctgacttcttctatgtacaa 146
              ||||||||||||||||||||
Sbjct: 112201 ctgacttcttctatgtacaa 112182
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>gb|AC101783.12| Mus musculus chromosome 1, clone RP24-136B19, complete sequence
          Length = 169909

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 369    atcaatgtcaatgtcaatga 388
              ||||||||||||||||||||
Sbjct: 127975 atcaatgtcaatgtcaatga 127956
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>gb|AY449458.1| Oikopleura dioica clone BACOIKO002 4xj18, complete sequence
          Length = 188193

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      aaaataaaatgatataatga 20
              ||||||||||||||||||||
Sbjct: 107365 aaaataaaatgatataatga 107384
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>gb|AC074042.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-99G18, complete
             sequence
          Length = 226048

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   aatgtcaatgaaccatttct 397
             ||||||||||||||||||||
Sbjct: 16692 aatgtcaatgaaccatttct 16711


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,418,703
Number of Sequences: 3902068
Number of extensions: 5418703
Number of successful extensions: 107684
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107452
Number of HSP's gapped (non-prelim): 231
length of query: 545
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 522
effective length of database: 17,143,297,704
effective search space: 8948801401488
effective search space used: 8948801401488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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